# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.195095829665661*${_u_distance} variable latticeconst_converted equal 4.195095829665661*1 lattice bcc ${latticeconst_converted} lattice bcc 4.19509582966566 Lattice spacing in x,y,z = 4.1950958 4.1950958 4.1950958 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (41.950958 41.950958 41.950958) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (41.950958 41.950958 41.950958) create_atoms CPU = 0.002 seconds variable mass_converted equal 22.98977*${_u_mass} variable mass_converted equal 22.98977*1 kim_interactions Na WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Na #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_KimKoLee_2020_NaSn__MO_329881861557_001 pair_coeff * * Na #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 22.98977 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 73828.7742291291 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 73828.7742291291/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 73828.7742291291/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 73828.7742291291/(1*1*${_u_distance}) variable V0_metal equal 73828.7742291291/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 73828.7742291291*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 73828.7742291291 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_329881861557_001#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -2160.5227 -2160.5227 -2225.9344 -2225.9344 253.15 253.15 73828.774 73828.774 946.34215 946.34215 1000 -2085.0463 -2085.0463 -2148.8478 -2148.8478 246.9181 246.9181 77192.139 77192.139 -308.82832 -308.82832 Loop time of 96.0611 on 1 procs for 1000 steps with 2000 atoms Performance: 0.899 ns/day, 26.684 hours/ns, 10.410 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 95.423 | 95.423 | 95.423 | 0.0 | 99.34 Neigh | 0.15138 | 0.15138 | 0.15138 | 0.0 | 0.16 Comm | 0.081184 | 0.081184 | 0.081184 | 0.0 | 0.08 Output | 0.00018965 | 0.00018965 | 0.00018965 | 0.0 | 0.00 Modify | 0.35013 | 0.35013 | 0.35013 | 0.0 | 0.36 Other | | 0.05493 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2838.00 ave 2838 max 2838 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62838.0 ave 62838 max 62838 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62838 Ave neighs/atom = 31.419000 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -2085.0463 -2085.0463 -2148.8478 -2148.8478 246.9181 246.9181 77192.139 77192.139 -308.82832 -308.82832 2000 -2091.894 -2091.894 -2157.4622 -2157.4622 253.75571 253.75571 76726.53 76726.53 -88.441783 -88.441783 Loop time of 104.642 on 1 procs for 1000 steps with 2000 atoms Performance: 0.826 ns/day, 29.067 hours/ns, 9.556 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 103.96 | 103.96 | 103.96 | 0.0 | 99.35 Neigh | 0.15759 | 0.15759 | 0.15759 | 0.0 | 0.15 Comm | 0.085899 | 0.085899 | 0.085899 | 0.0 | 0.08 Output | 0.00023312 | 0.00023312 | 0.00023312 | 0.0 | 0.00 Modify | 0.37992 | 0.37992 | 0.37992 | 0.0 | 0.36 Other | | 0.05737 | | | 0.05 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2910.00 ave 2910 max 2910 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62550.0 ave 62550 max 62550 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62550 Ave neighs/atom = 31.275000 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -2091.894 -2091.894 -2157.4622 -2157.4622 253.75571 253.75571 76726.53 76726.53 -88.441783 -88.441783 3000 -2091.3569 -2091.3569 -2157.1199 -2157.1199 254.50979 254.50979 76674.969 76674.969 120.9712 120.9712 Loop time of 106.734 on 1 procs for 1000 steps with 2000 atoms Performance: 0.809 ns/day, 29.648 hours/ns, 9.369 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 106.02 | 106.02 | 106.02 | 0.0 | 99.34 Neigh | 0.16384 | 0.16384 | 0.16384 | 0.0 | 0.15 Comm | 0.087958 | 0.087958 | 0.087958 | 0.0 | 0.08 Output | 0.00019065 | 0.00019065 | 0.00019065 | 0.0 | 0.00 Modify | 0.39742 | 0.39742 | 0.39742 | 0.0 | 0.37 Other | | 0.06013 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2881.00 ave 2881 max 2881 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62658.0 ave 62658 max 62658 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62658 Ave neighs/atom = 31.329000 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -2091.3569 -2091.3569 -2157.1199 -2157.1199 254.50979 254.50979 76674.969 76674.969 120.9712 120.9712 4000 -2091.1035 -2091.1035 -2155.71 -2155.71 250.03365 250.03365 76732.593 76732.593 8.621149 8.621149 Loop time of 109.643 on 1 procs for 1000 steps with 2000 atoms Performance: 0.788 ns/day, 30.456 hours/ns, 9.120 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 108.93 | 108.93 | 108.93 | 0.0 | 99.35 Neigh | 0.16292 | 0.16292 | 0.16292 | 0.0 | 0.15 Comm | 0.088914 | 0.088914 | 0.088914 | 0.0 | 0.08 Output | 0.00022372 | 0.00022372 | 0.00022372 | 0.0 | 0.00 Modify | 0.40649 | 0.40649 | 0.40649 | 0.0 | 0.37 Other | | 0.05896 | | | 0.05 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2890.00 ave 2890 max 2890 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62152.0 ave 62152 max 62152 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62152 Ave neighs/atom = 31.076000 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -2091.1035 -2091.1035 -2155.71 -2155.71 250.03365 250.03365 76732.593 76732.593 8.621149 8.621149 5000 -2090.0365 -2090.0365 -2155.2527 -2155.2527 252.39338 252.39338 76883.778 76883.778 -133.75085 -133.75085 Loop time of 110.054 on 1 procs for 1000 steps with 2000 atoms Performance: 0.785 ns/day, 30.570 hours/ns, 9.086 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 109.32 | 109.32 | 109.32 | 0.0 | 99.33 Neigh | 0.17853 | 0.17853 | 0.17853 | 0.0 | 0.16 Comm | 0.089158 | 0.089158 | 0.089158 | 0.0 | 0.08 Output | 0.00016424 | 0.00016424 | 0.00016424 | 0.0 | 0.00 Modify | 0.40707 | 0.40707 | 0.40707 | 0.0 | 0.37 Other | | 0.05849 | | | 0.05 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2880.00 ave 2880 max 2880 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62518.0 ave 62518 max 62518 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62518 Ave neighs/atom = 31.259000 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.097065193239, Press = -79.9181505919714 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -2090.0365 -2090.0365 -2155.2527 -2155.2527 252.39338 252.39338 76883.778 76883.778 -133.75085 -133.75085 6000 -2091.4631 -2091.4631 -2157.5091 -2157.5091 255.60476 255.60476 76442.764 76442.764 256.82924 256.82924 Loop time of 109.637 on 1 procs for 1000 steps with 2000 atoms Performance: 0.788 ns/day, 30.455 hours/ns, 9.121 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 108.87 | 108.87 | 108.87 | 0.0 | 99.30 Neigh | 0.17877 | 0.17877 | 0.17877 | 0.0 | 0.16 Comm | 0.090374 | 0.090374 | 0.090374 | 0.0 | 0.08 Output | 0.00021193 | 0.00021193 | 0.00021193 | 0.0 | 0.00 Modify | 0.43551 | 0.43551 | 0.43551 | 0.0 | 0.40 Other | | 0.05979 | | | 0.05 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2902.00 ave 2902 max 2902 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62918.0 ave 62918 max 62918 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62918 Ave neighs/atom = 31.459000 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.606960305817, Press = -8.63613127301441 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -2091.4631 -2091.4631 -2157.5091 -2157.5091 255.60476 255.60476 76442.764 76442.764 256.82924 256.82924 7000 -2090.2771 -2090.2771 -2156.3728 -2156.3728 255.79724 255.79724 77071.499 77071.499 -410.03172 -410.03172 Loop time of 110.037 on 1 procs for 1000 steps with 2000 atoms Performance: 0.785 ns/day, 30.566 hours/ns, 9.088 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 109.28 | 109.28 | 109.28 | 0.0 | 99.31 Neigh | 0.17917 | 0.17917 | 0.17917 | 0.0 | 0.16 Comm | 0.089297 | 0.089297 | 0.089297 | 0.0 | 0.08 Output | 0.00015434 | 0.00015434 | 0.00015434 | 0.0 | 0.00 Modify | 0.42811 | 0.42811 | 0.42811 | 0.0 | 0.39 Other | | 0.0591 | | | 0.05 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2881.00 ave 2881 max 2881 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 61952.0 ave 61952 max 61952 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 61952 Ave neighs/atom = 30.976000 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.695223580037, Press = -16.1211779390054 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -2090.2771 -2090.2771 -2156.3728 -2156.3728 255.79724 255.79724 77071.499 77071.499 -410.03172 -410.03172 8000 -2088.4589 -2088.4589 -2153.6659 -2153.6659 252.35803 252.35803 76871.358 76871.358 62.83069 62.83069 Loop time of 104.994 on 1 procs for 1000 steps with 2000 atoms Performance: 0.823 ns/day, 29.165 hours/ns, 9.524 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 104.27 | 104.27 | 104.27 | 0.0 | 99.31 Neigh | 0.1749 | 0.1749 | 0.1749 | 0.0 | 0.17 Comm | 0.08715 | 0.08715 | 0.08715 | 0.0 | 0.08 Output | 0.00015396 | 0.00015396 | 0.00015396 | 0.0 | 0.00 Modify | 0.40414 | 0.40414 | 0.40414 | 0.0 | 0.38 Other | | 0.0576 | | | 0.05 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2895.00 ave 2895 max 2895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62706.0 ave 62706 max 62706 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62706 Ave neighs/atom = 31.353000 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.586235230256, Press = 1.84008808390517 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -2088.4589 -2088.4589 -2153.6659 -2153.6659 252.35803 252.35803 76871.358 76871.358 62.83069 62.83069 9000 -2090.9839 -2090.9839 -2156.7846 -2156.7846 254.65576 254.65576 76561.131 76561.131 177.34429 177.34429 Loop time of 95.8142 on 1 procs for 1000 steps with 2000 atoms Performance: 0.902 ns/day, 26.615 hours/ns, 10.437 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 95.166 | 95.166 | 95.166 | 0.0 | 99.32 Neigh | 0.16554 | 0.16554 | 0.16554 | 0.0 | 0.17 Comm | 0.078914 | 0.078914 | 0.078914 | 0.0 | 0.08 Output | 0.00015638 | 0.00015638 | 0.00015638 | 0.0 | 0.00 Modify | 0.35013 | 0.35013 | 0.35013 | 0.0 | 0.37 Other | | 0.05384 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2880.00 ave 2880 max 2880 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62870.0 ave 62870 max 62870 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62870 Ave neighs/atom = 31.435000 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.474279271227, Press = -1.1448609357623 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -2090.9839 -2090.9839 -2156.7846 -2156.7846 254.65576 254.65576 76561.131 76561.131 177.34429 177.34429 10000 -2091.1025 -2091.1025 -2155.4673 -2155.4673 249.09813 249.09813 76770.747 76770.747 -81.59001 -81.59001 Loop time of 95.7027 on 1 procs for 1000 steps with 2000 atoms Performance: 0.903 ns/day, 26.584 hours/ns, 10.449 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 95.069 | 95.069 | 95.069 | 0.0 | 99.34 Neigh | 0.15203 | 0.15203 | 0.15203 | 0.0 | 0.16 Comm | 0.078322 | 0.078322 | 0.078322 | 0.0 | 0.08 Output | 0.00015317 | 0.00015317 | 0.00015317 | 0.0 | 0.00 Modify | 0.34906 | 0.34906 | 0.34906 | 0.0 | 0.36 Other | | 0.05405 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2884.00 ave 2884 max 2884 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62572.0 ave 62572 max 62572 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62572 Ave neighs/atom = 31.286000 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.339126408344, Press = -3.27499840632134 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -2091.1025 -2091.1025 -2155.4673 -2155.4673 249.09813 249.09813 76770.747 76770.747 -81.59001 -81.59001 11000 -2087.3335 -2087.3335 -2153.5781 -2153.5781 256.37349 256.37349 76927.132 76927.132 -178.70415 -178.70415 Loop time of 95.9907 on 1 procs for 1000 steps with 2000 atoms Performance: 0.900 ns/day, 26.664 hours/ns, 10.418 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 95.342 | 95.342 | 95.342 | 0.0 | 99.32 Neigh | 0.1659 | 0.1659 | 0.1659 | 0.0 | 0.17 Comm | 0.078924 | 0.078924 | 0.078924 | 0.0 | 0.08 Output | 0.00018732 | 0.00018732 | 0.00018732 | 0.0 | 0.00 Modify | 0.35005 | 0.35005 | 0.35005 | 0.0 | 0.36 Other | | 0.05379 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2873.00 ave 2873 max 2873 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62440.0 ave 62440 max 62440 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62440 Ave neighs/atom = 31.220000 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.504047243545, Press = -0.983172080650373 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -2087.3335 -2087.3335 -2153.5781 -2153.5781 256.37349 256.37349 76927.132 76927.132 -178.70415 -178.70415 12000 -2090.738 -2090.738 -2155.5001 -2155.5001 250.63604 250.63604 76739.224 76739.224 29.855674 29.855674 Loop time of 95.7111 on 1 procs for 1000 steps with 2000 atoms Performance: 0.903 ns/day, 26.586 hours/ns, 10.448 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 95.063 | 95.063 | 95.063 | 0.0 | 99.32 Neigh | 0.16587 | 0.16587 | 0.16587 | 0.0 | 0.17 Comm | 0.078922 | 0.078922 | 0.078922 | 0.0 | 0.08 Output | 0.00015412 | 0.00015412 | 0.00015412 | 0.0 | 0.00 Modify | 0.34906 | 0.34906 | 0.34906 | 0.0 | 0.36 Other | | 0.0537 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2891.00 ave 2891 max 2891 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62530.0 ave 62530 max 62530 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62530 Ave neighs/atom = 31.265000 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.70374315876, Press = -2.00466473039047 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -2090.738 -2090.738 -2155.5001 -2155.5001 250.63604 250.63604 76739.224 76739.224 29.855674 29.855674 13000 -2089.4871 -2089.4871 -2154.9031 -2154.9031 253.16699 253.16699 76781.58 76781.58 -113.52474 -113.52474 Loop time of 95.6119 on 1 procs for 1000 steps with 2000 atoms Performance: 0.904 ns/day, 26.559 hours/ns, 10.459 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 94.978 | 94.978 | 94.978 | 0.0 | 99.34 Neigh | 0.15147 | 0.15147 | 0.15147 | 0.0 | 0.16 Comm | 0.078441 | 0.078441 | 0.078441 | 0.0 | 0.08 Output | 0.00015307 | 0.00015307 | 0.00015307 | 0.0 | 0.00 Modify | 0.34965 | 0.34965 | 0.34965 | 0.0 | 0.37 Other | | 0.05402 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2900.00 ave 2900 max 2900 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62662.0 ave 62662 max 62662 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62662 Ave neighs/atom = 31.331000 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.688201465621, Press = -1.72541702320006 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -2089.4871 -2089.4871 -2154.9031 -2154.9031 253.16699 253.16699 76781.58 76781.58 -113.52474 -113.52474 14000 -2088.9672 -2088.9672 -2154.5977 -2154.5977 253.99687 253.99687 76742.915 76742.915 29.864722 29.864722 Loop time of 95.5487 on 1 procs for 1000 steps with 2000 atoms Performance: 0.904 ns/day, 26.541 hours/ns, 10.466 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 94.915 | 94.915 | 94.915 | 0.0 | 99.34 Neigh | 0.15189 | 0.15189 | 0.15189 | 0.0 | 0.16 Comm | 0.078571 | 0.078571 | 0.078571 | 0.0 | 0.08 Output | 0.00015288 | 0.00015288 | 0.00015288 | 0.0 | 0.00 Modify | 0.34906 | 0.34906 | 0.34906 | 0.0 | 0.37 Other | | 0.05387 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2892.00 ave 2892 max 2892 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62474.0 ave 62474 max 62474 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62474 Ave neighs/atom = 31.237000 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.803999606099, Press = -1.91717721592774 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -2088.9672 -2088.9672 -2154.5977 -2154.5977 253.99687 253.99687 76742.915 76742.915 29.864722 29.864722 15000 -2090.7599 -2090.7599 -2155.3943 -2155.3943 250.14183 250.14183 76781.476 76781.476 -16.501887 -16.501887 Loop time of 95.7384 on 1 procs for 1000 steps with 2000 atoms Performance: 0.902 ns/day, 26.594 hours/ns, 10.445 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 95.09 | 95.09 | 95.09 | 0.0 | 99.32 Neigh | 0.16585 | 0.16585 | 0.16585 | 0.0 | 0.17 Comm | 0.079248 | 0.079248 | 0.079248 | 0.0 | 0.08 Output | 0.00042619 | 0.00042619 | 0.00042619 | 0.0 | 0.00 Modify | 0.34865 | 0.34865 | 0.34865 | 0.0 | 0.36 Other | | 0.05399 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2878.00 ave 2878 max 2878 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62510.0 ave 62510 max 62510 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62510 Ave neighs/atom = 31.255000 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.925311386175, Press = -1.04379985516776 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -2090.7599 -2090.7599 -2155.3943 -2155.3943 250.14183 250.14183 76781.476 76781.476 -16.501887 -16.501887 16000 -2088.4408 -2088.4408 -2154.1148 -2154.1148 254.16513 254.16513 76732.822 76732.822 129.72355 129.72355 Loop time of 95.5426 on 1 procs for 1000 steps with 2000 atoms Performance: 0.904 ns/day, 26.540 hours/ns, 10.467 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 94.91 | 94.91 | 94.91 | 0.0 | 99.34 Neigh | 0.15114 | 0.15114 | 0.15114 | 0.0 | 0.16 Comm | 0.078732 | 0.078732 | 0.078732 | 0.0 | 0.08 Output | 0.00015387 | 0.00015387 | 0.00015387 | 0.0 | 0.00 Modify | 0.34906 | 0.34906 | 0.34906 | 0.0 | 0.37 Other | | 0.0536 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2873.00 ave 2873 max 2873 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62680.0 ave 62680 max 62680 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62680 Ave neighs/atom = 31.340000 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.826583000049, Press = -2.44531685267877 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -2088.4408 -2088.4408 -2154.1148 -2154.1148 254.16513 254.16513 76732.822 76732.822 129.72355 129.72355 17000 -2089.8906 -2089.8906 -2155.3622 -2155.3622 253.38179 253.38179 76961.899 76961.899 -158.10733 -158.10733 Loop time of 95.4367 on 1 procs for 1000 steps with 2000 atoms Performance: 0.905 ns/day, 26.510 hours/ns, 10.478 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 94.79 | 94.79 | 94.79 | 0.0 | 99.32 Neigh | 0.16523 | 0.16523 | 0.16523 | 0.0 | 0.17 Comm | 0.078622 | 0.078622 | 0.078622 | 0.0 | 0.08 Output | 0.00015393 | 0.00015393 | 0.00015393 | 0.0 | 0.00 Modify | 0.34879 | 0.34879 | 0.34879 | 0.0 | 0.37 Other | | 0.05375 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2873.00 ave 2873 max 2873 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62590.0 ave 62590 max 62590 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62590 Ave neighs/atom = 31.295000 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.857899150285, Press = -0.61532259674229 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -2089.8906 -2089.8906 -2155.3622 -2155.3622 253.38179 253.38179 76961.899 76961.899 -158.10733 -158.10733 18000 -2086.2864 -2086.2864 -2153.1769 -2153.1769 258.8732 258.8732 76662.999 76662.999 287.00819 287.00819 Loop time of 95.4172 on 1 procs for 1000 steps with 2000 atoms Performance: 0.905 ns/day, 26.505 hours/ns, 10.480 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 94.772 | 94.772 | 94.772 | 0.0 | 99.32 Neigh | 0.1652 | 0.1652 | 0.1652 | 0.0 | 0.17 Comm | 0.078467 | 0.078467 | 0.078467 | 0.0 | 0.08 Output | 0.00018612 | 0.00018612 | 0.00018612 | 0.0 | 0.00 Modify | 0.348 | 0.348 | 0.348 | 0.0 | 0.36 Other | | 0.05325 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2891.00 ave 2891 max 2891 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62640.0 ave 62640 max 62640 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62640 Ave neighs/atom = 31.320000 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.127658180367, Press = -0.438412092896876 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -2086.2864 -2086.2864 -2153.1769 -2153.1769 258.8732 258.8732 76662.999 76662.999 287.00819 287.00819 19000 -2090.7312 -2090.7312 -2158.369 -2158.369 261.76526 261.76526 76577.841 76577.841 0.35699285 0.35699285 Loop time of 95.4603 on 1 procs for 1000 steps with 2000 atoms Performance: 0.905 ns/day, 26.517 hours/ns, 10.476 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 94.828 | 94.828 | 94.828 | 0.0 | 99.34 Neigh | 0.15138 | 0.15138 | 0.15138 | 0.0 | 0.16 Comm | 0.078732 | 0.078732 | 0.078732 | 0.0 | 0.08 Output | 0.00015319 | 0.00015319 | 0.00015319 | 0.0 | 0.00 Modify | 0.34777 | 0.34777 | 0.34777 | 0.0 | 0.36 Other | | 0.05402 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2913.00 ave 2913 max 2913 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62448.0 ave 62448 max 62448 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62448 Ave neighs/atom = 31.224000 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.206868064198, Press = -1.22725290025692 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -2090.7312 -2090.7312 -2158.369 -2158.369 261.76526 261.76526 76577.841 76577.841 0.35699285 0.35699285 20000 -2089.1025 -2089.1025 -2154.7161 -2154.7161 253.93135 253.93135 77116.522 77116.522 -285.36832 -285.36832 Loop time of 95.4915 on 1 procs for 1000 steps with 2000 atoms Performance: 0.905 ns/day, 26.525 hours/ns, 10.472 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 94.846 | 94.846 | 94.846 | 0.0 | 99.32 Neigh | 0.16489 | 0.16489 | 0.16489 | 0.0 | 0.17 Comm | 0.079066 | 0.079066 | 0.079066 | 0.0 | 0.08 Output | 0.00015578 | 0.00015578 | 0.00015578 | 0.0 | 0.00 Modify | 0.34784 | 0.34784 | 0.34784 | 0.0 | 0.36 Other | | 0.05382 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2879.00 ave 2879 max 2879 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62256.0 ave 62256 max 62256 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62256 Ave neighs/atom = 31.128000 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.300130376512, Press = -1.10974448666456 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.325 | 3.325 | 3.325 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -2089.1025 -2089.1025 -2154.7161 -2154.7161 253.93135 253.93135 77116.522 77116.522 -285.36832 -285.36832 21000 -2090.5746 -2090.5746 -2154.9961 -2154.9961 249.31777 249.31777 76563.093 76563.093 242.5626 242.5626 Loop time of 95.619 on 1 procs for 1000 steps with 2000 atoms Performance: 0.904 ns/day, 26.561 hours/ns, 10.458 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 94.972 | 94.972 | 94.972 | 0.0 | 99.32 Neigh | 0.16549 | 0.16549 | 0.16549 | 0.0 | 0.17 Comm | 0.079265 | 0.079265 | 0.079265 | 0.0 | 0.08 Output | 0.00015145 | 0.00015145 | 0.00015145 | 0.0 | 0.00 Modify | 0.34837 | 0.34837 | 0.34837 | 0.0 | 0.36 Other | | 0.05376 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2908.00 ave 2908 max 2908 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62812.0 ave 62812 max 62812 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62812 Ave neighs/atom = 31.406000 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.257668126324, Press = -0.253742862526286 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -2090.5746 -2090.5746 -2154.9961 -2154.9961 249.31777 249.31777 76563.093 76563.093 242.5626 242.5626 22000 -2092.0455 -2092.0455 -2157.3256 -2157.3256 252.64071 252.64071 76520.911 76520.911 104.05708 104.05708 Loop time of 95.6292 on 1 procs for 1000 steps with 2000 atoms Performance: 0.903 ns/day, 26.564 hours/ns, 10.457 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 94.984 | 94.984 | 94.984 | 0.0 | 99.33 Neigh | 0.16514 | 0.16514 | 0.16514 | 0.0 | 0.17 Comm | 0.078805 | 0.078805 | 0.078805 | 0.0 | 0.08 Output | 0.00015508 | 0.00015508 | 0.00015508 | 0.0 | 0.00 Modify | 0.34718 | 0.34718 | 0.34718 | 0.0 | 0.36 Other | | 0.05397 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2908.00 ave 2908 max 2908 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62348.0 ave 62348 max 62348 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62348 Ave neighs/atom = 31.174000 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.272035599286, Press = -2.07196655088794 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -2092.0455 -2092.0455 -2157.3256 -2157.3256 252.64071 252.64071 76520.911 76520.911 104.05708 104.05708 23000 -2088.1753 -2088.1753 -2154.0077 -2154.0077 254.77799 254.77799 77035.29 77035.29 -370.17191 -370.17191 Loop time of 95.532 on 1 procs for 1000 steps with 2000 atoms Performance: 0.904 ns/day, 26.537 hours/ns, 10.468 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 94.9 | 94.9 | 94.9 | 0.0 | 99.34 Neigh | 0.15181 | 0.15181 | 0.15181 | 0.0 | 0.16 Comm | 0.07789 | 0.07789 | 0.07789 | 0.0 | 0.08 Output | 0.00015451 | 0.00015451 | 0.00015451 | 0.0 | 0.00 Modify | 0.34921 | 0.34921 | 0.34921 | 0.0 | 0.37 Other | | 0.05322 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2906.00 ave 2906 max 2906 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62574.0 ave 62574 max 62574 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62574 Ave neighs/atom = 31.287000 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.203576634184, Press = -0.59651840942918 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 13 13 13 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.326 | 3.326 | 3.326 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -2088.1753 -2088.1753 -2154.0077 -2154.0077 254.77799 254.77799 77035.29 77035.29 -370.17191 -370.17191 24000 -2087.8864 -2087.8864 -2154.7218 -2154.7218 258.66006 258.66006 76722.651 76722.651 125.01665 125.01665 Loop time of 95.2938 on 1 procs for 1000 steps with 2000 atoms Performance: 0.907 ns/day, 26.470 hours/ns, 10.494 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 94.662 | 94.662 | 94.662 | 0.0 | 99.34 Neigh | 0.15166 | 0.15166 | 0.15166 | 0.0 | 0.16 Comm | 0.07732 | 0.07732 | 0.07732 | 0.0 | 0.08 Output | 0.00015458 | 0.00015458 | 0.00015458 | 0.0 | 0.00 Modify | 0.34834 | 0.34834 | 0.34834 | 0.0 | 0.37 Other | | 0.05427 | | | 0.06 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 2879.00 ave 2879 max 2879 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 62920.0 ave 62920 max 62920 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 62920 Ave neighs/atom = 31.460000 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 76747.7627742931 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0