# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.322974419593815*${_u_distance} variable latticeconst_converted equal 4.322974419593815*1 lattice bcc ${latticeconst_converted} lattice bcc 4.32297441959382 Lattice spacing in x,y,z = 4.32297 4.32297 4.32297 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (43.2297 43.2297 43.2297) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms create_atoms CPU = 0.0203202 secs variable mass_converted equal 22.98977*${_u_mass} variable mass_converted equal 22.98977*1 # specify which KIM Model to use pair_style kim Morse_Shifted_GirifalcoWeizer_1959MedCutoff_Na__MO_636041334617_003 WARNING: KIM Model does not provide `partialParticleVirial'; virial per atom will be zero (src/KIM/pair_kim.cpp:979) pair_coeff * * Na mass 1 ${mass_converted} mass 1 22.98977 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 80788.2121103464 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 80788.2121103464/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 80788.2121103464/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 80788.2121103464/(1*1*${_u_distance}) variable V0_metal equal 80788.2121103464/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 80788.2121103464*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 80788.2121103464 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 333.15*${_u_temperature} variable temp_converted equal 333.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 333.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "333.15 - 0.2" variable T_up equal "333.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 20.22 ghost atom cutoff = 20.22 binsize = 10.11, bins = 5 5 5 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 20.22 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -2132.1079 -2132.1079 -2218.1908 -2218.1908 333.15 333.15 80788.212 80788.212 1138.1229 1138.1229 1000 -2033.2605 -2033.2605 -2119.9699 -2119.9699 335.57447 335.57447 84537.756 84537.756 194.58192 194.58192 Loop time of 103.647 on 1 procs for 1000 steps with 2000 atoms Performance: 0.834 ns/day, 28.791 hours/ns, 9.648 timesteps/s 39.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 102.05 | 102.05 | 102.05 | 0.0 | 98.46 Neigh | 1.2043 | 1.2043 | 1.2043 | 0.0 | 1.16 Comm | 0.19547 | 0.19547 | 0.19547 | 0.0 | 0.19 Output | 4.0054e-05 | 4.0054e-05 | 4.0054e-05 | 0.0 | 0.00 Modify | 0.18149 | 0.18149 | 0.18149 | 0.0 | 0.18 Other | | 0.01571 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12651 ave 12651 max 12651 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.65835e+06 ave 1.65835e+06 max 1.65835e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1658350 Ave neighs/atom = 829.175 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -2033.2605 -2033.2605 -2119.9699 -2119.9699 335.57447 335.57447 84537.756 84537.756 194.58192 194.58192 2000 -2039.6683 -2039.6683 -2128.0195 -2128.0195 341.92837 341.92837 84367.306 84367.306 173.70429 173.70429 Loop time of 100.69 on 1 procs for 1000 steps with 2000 atoms Performance: 0.858 ns/day, 27.969 hours/ns, 9.931 timesteps/s 40.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 98.875 | 98.875 | 98.875 | 0.0 | 98.20 Neigh | 1.371 | 1.371 | 1.371 | 0.0 | 1.36 Comm | 0.15556 | 0.15556 | 0.15556 | 0.0 | 0.15 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.17326 | 0.17326 | 0.17326 | 0.0 | 0.17 Other | | 0.1157 | | | 0.11 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12719 ave 12719 max 12719 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.66566e+06 ave 1.66566e+06 max 1.66566e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1665664 Ave neighs/atom = 832.832 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -2039.6683 -2039.6683 -2128.0195 -2128.0195 341.92837 341.92837 84367.306 84367.306 173.70429 173.70429 3000 -2040.7229 -2040.7229 -2126.334 -2126.334 331.32377 331.32377 84426.326 84426.326 126.08839 126.08839 Loop time of 98.3191 on 1 procs for 1000 steps with 2000 atoms Performance: 0.879 ns/day, 27.311 hours/ns, 10.171 timesteps/s 41.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 96.352 | 96.352 | 96.352 | 0.0 | 98.00 Neigh | 1.4497 | 1.4497 | 1.4497 | 0.0 | 1.47 Comm | 0.19042 | 0.19042 | 0.19042 | 0.0 | 0.19 Output | 4.0054e-05 | 4.0054e-05 | 4.0054e-05 | 0.0 | 0.00 Modify | 0.24122 | 0.24122 | 0.24122 | 0.0 | 0.25 Other | | 0.08556 | | | 0.09 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12697 ave 12697 max 12697 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.66214e+06 ave 1.66214e+06 max 1.66214e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1662142 Ave neighs/atom = 831.071 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -2040.7229 -2040.7229 -2126.334 -2126.334 331.32377 331.32377 84426.326 84426.326 126.08839 126.08839 4000 -2037.253 -2037.253 -2125.2212 -2125.2212 340.44621 340.44621 84736.852 84736.852 -21.912154 -21.912154 Loop time of 94.8193 on 1 procs for 1000 steps with 2000 atoms Performance: 0.911 ns/day, 26.339 hours/ns, 10.546 timesteps/s 43.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 93.262 | 93.262 | 93.262 | 0.0 | 98.36 Neigh | 1.1365 | 1.1365 | 1.1365 | 0.0 | 1.20 Comm | 0.20416 | 0.20416 | 0.20416 | 0.0 | 0.22 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.20073 | 0.20073 | 0.20073 | 0.0 | 0.21 Other | | 0.01554 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12691 ave 12691 max 12691 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.65956e+06 ave 1.65956e+06 max 1.65956e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1659564 Ave neighs/atom = 829.782 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -2037.253 -2037.253 -2125.2212 -2125.2212 340.44621 340.44621 84736.852 84736.852 -21.912154 -21.912154 5000 -2039.4646 -2039.4646 -2125.1365 -2125.1365 331.55903 331.55903 84806.178 84806.178 -107.2462 -107.2462 Loop time of 94.0795 on 1 procs for 1000 steps with 2000 atoms Performance: 0.918 ns/day, 26.133 hours/ns, 10.629 timesteps/s 43.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 92.58 | 92.58 | 92.58 | 0.0 | 98.41 Neigh | 1.1947 | 1.1947 | 1.1947 | 0.0 | 1.27 Comm | 0.096275 | 0.096275 | 0.096275 | 0.0 | 0.10 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.17132 | 0.17132 | 0.17132 | 0.0 | 0.18 Other | | 0.03712 | | | 0.04 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12653 ave 12653 max 12653 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.66073e+06 ave 1.66073e+06 max 1.66073e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1660726 Ave neighs/atom = 830.363 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 336.152063631363, Press = 66.9328482519755 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -2039.4646 -2039.4646 -2125.1365 -2125.1365 331.55903 331.55903 84806.178 84806.178 -107.2462 -107.2462 6000 -2040.956 -2040.956 -2125.6926 -2125.6926 327.93906 327.93906 84705.115 84705.115 -69.522952 -69.522952 Loop time of 94.8994 on 1 procs for 1000 steps with 2000 atoms Performance: 0.910 ns/day, 26.361 hours/ns, 10.537 timesteps/s 43.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 93.217 | 93.217 | 93.217 | 0.0 | 98.23 Neigh | 1.2644 | 1.2644 | 1.2644 | 0.0 | 1.33 Comm | 0.23665 | 0.23665 | 0.23665 | 0.0 | 0.25 Output | 2.3127e-05 | 2.3127e-05 | 2.3127e-05 | 0.0 | 0.00 Modify | 0.16587 | 0.16587 | 0.16587 | 0.0 | 0.17 Other | | 0.01552 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12747 ave 12747 max 12747 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.66196e+06 ave 1.66196e+06 max 1.66196e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1661964 Ave neighs/atom = 830.982 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 334.816127120804, Press = 6.16690111078775 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -2040.956 -2040.956 -2125.6926 -2125.6926 327.93906 327.93906 84705.115 84705.115 -69.522952 -69.522952 7000 -2036.0264 -2036.0264 -2122.8442 -2122.8442 335.99383 335.99383 84841.917 84841.917 -66.809047 -66.809047 Loop time of 91.9691 on 1 procs for 1000 steps with 2000 atoms Performance: 0.939 ns/day, 25.547 hours/ns, 10.873 timesteps/s 44.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 90.281 | 90.281 | 90.281 | 0.0 | 98.16 Neigh | 1.3107 | 1.3107 | 1.3107 | 0.0 | 1.43 Comm | 0.15585 | 0.15585 | 0.15585 | 0.0 | 0.17 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.18572 | 0.18572 | 0.18572 | 0.0 | 0.20 Other | | 0.03565 | | | 0.04 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12639 ave 12639 max 12639 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.65392e+06 ave 1.65392e+06 max 1.65392e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1653916 Ave neighs/atom = 826.958 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 334.558098148454, Press = 7.16064788567823 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -2036.0264 -2036.0264 -2122.8442 -2122.8442 335.99383 335.99383 84841.917 84841.917 -66.809047 -66.809047 8000 -2038.5557 -2038.5557 -2125.9164 -2125.9164 338.09503 338.09503 84612.067 84612.067 26.332712 26.332712 Loop time of 92.6145 on 1 procs for 1000 steps with 2000 atoms Performance: 0.933 ns/day, 25.726 hours/ns, 10.797 timesteps/s 44.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 91.03 | 91.03 | 91.03 | 0.0 | 98.29 Neigh | 1.2477 | 1.2477 | 1.2477 | 0.0 | 1.35 Comm | 0.1154 | 0.1154 | 0.1154 | 0.0 | 0.12 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.18506 | 0.18506 | 0.18506 | 0.0 | 0.20 Other | | 0.03639 | | | 0.04 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12729 ave 12729 max 12729 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.6643e+06 ave 1.6643e+06 max 1.6643e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1664300 Ave neighs/atom = 832.15 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 334.447360913362, Press = 1.3230454250376 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -2038.5557 -2038.5557 -2125.9164 -2125.9164 338.09503 338.09503 84612.067 84612.067 26.332712 26.332712 9000 -2041.9267 -2041.9267 -2127.5789 -2127.5789 331.48285 331.48285 84460.03 84460.03 89.263027 89.263027 Loop time of 89.0531 on 1 procs for 1000 steps with 2000 atoms Performance: 0.970 ns/day, 24.737 hours/ns, 11.229 timesteps/s 46.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 87.591 | 87.591 | 87.591 | 0.0 | 98.36 Neigh | 1.1318 | 1.1318 | 1.1318 | 0.0 | 1.27 Comm | 0.1997 | 0.1997 | 0.1997 | 0.0 | 0.22 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.095059 | 0.095059 | 0.095059 | 0.0 | 0.11 Other | | 0.03556 | | | 0.04 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12711 ave 12711 max 12711 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.66178e+06 ave 1.66178e+06 max 1.66178e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1661782 Ave neighs/atom = 830.891 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.744303221038, Press = -2.7615396917791 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -2041.9267 -2041.9267 -2127.5789 -2127.5789 331.48285 331.48285 84460.03 84460.03 89.263027 89.263027 10000 -2043.5095 -2043.5095 -2126.4846 -2126.4846 321.1224 321.1224 84358.517 84358.517 133.97174 133.97174 Loop time of 89.9422 on 1 procs for 1000 steps with 2000 atoms Performance: 0.961 ns/day, 24.984 hours/ns, 11.118 timesteps/s 45.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 88.352 | 88.352 | 88.352 | 0.0 | 98.23 Neigh | 1.114 | 1.114 | 1.114 | 0.0 | 1.24 Comm | 0.25539 | 0.25539 | 0.25539 | 0.0 | 0.28 Output | 2.5988e-05 | 2.5988e-05 | 2.5988e-05 | 0.0 | 0.00 Modify | 0.14524 | 0.14524 | 0.14524 | 0.0 | 0.16 Other | | 0.07551 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12711 ave 12711 max 12711 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.66359e+06 ave 1.66359e+06 max 1.66359e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1663586 Ave neighs/atom = 831.793 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.528220799862, Press = -4.79400803451091 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -2043.5095 -2043.5095 -2126.4846 -2126.4846 321.1224 321.1224 84358.517 84358.517 133.97174 133.97174 11000 -2044.4188 -2044.4188 -2127.0958 -2127.0958 319.96874 319.96874 84557.202 84557.202 -15.692416 -15.692416 Loop time of 90.4951 on 1 procs for 1000 steps with 2000 atoms Performance: 0.955 ns/day, 25.138 hours/ns, 11.050 timesteps/s 45.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 88.946 | 88.946 | 88.946 | 0.0 | 98.29 Neigh | 1.1832 | 1.1832 | 1.1832 | 0.0 | 1.31 Comm | 0.095108 | 0.095108 | 0.095108 | 0.0 | 0.11 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.25514 | 0.25514 | 0.25514 | 0.0 | 0.28 Other | | 0.01567 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12711 ave 12711 max 12711 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.66171e+06 ave 1.66171e+06 max 1.66171e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1661710 Ave neighs/atom = 830.855 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.105329216211, Press = -5.7266931401328 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -2044.4188 -2044.4188 -2127.0958 -2127.0958 319.96874 319.96874 84557.202 84557.202 -15.692416 -15.692416 12000 -2038.4909 -2038.4909 -2122.5033 -2122.5033 325.13682 325.13682 84916.592 84916.592 -153.94753 -153.94753 Loop time of 90.3887 on 1 procs for 1000 steps with 2000 atoms Performance: 0.956 ns/day, 25.108 hours/ns, 11.063 timesteps/s 45.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 88.775 | 88.775 | 88.775 | 0.0 | 98.21 Neigh | 1.2384 | 1.2384 | 1.2384 | 0.0 | 1.37 Comm | 0.17517 | 0.17517 | 0.17517 | 0.0 | 0.19 Output | 2.2888e-05 | 2.2888e-05 | 2.2888e-05 | 0.0 | 0.00 Modify | 0.18458 | 0.18458 | 0.18458 | 0.0 | 0.20 Other | | 0.01548 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12643 ave 12643 max 12643 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.64863e+06 ave 1.64863e+06 max 1.64863e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1648632 Ave neighs/atom = 824.316 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.756321483177, Press = -7.17627838243748 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -2038.4909 -2038.4909 -2122.5033 -2122.5033 325.13682 325.13682 84916.592 84916.592 -153.94753 -153.94753 13000 -2034.4588 -2034.4588 -2122.0488 -2122.0488 338.98214 338.98214 85001.731 85001.731 -144.53245 -144.53245 Loop time of 90.1343 on 1 procs for 1000 steps with 2000 atoms Performance: 0.959 ns/day, 25.037 hours/ns, 11.095 timesteps/s 45.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 88.366 | 88.366 | 88.366 | 0.0 | 98.04 Neigh | 1.3128 | 1.3128 | 1.3128 | 0.0 | 1.46 Comm | 0.19533 | 0.19533 | 0.19533 | 0.0 | 0.22 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.22483 | 0.22483 | 0.22483 | 0.0 | 0.25 Other | | 0.03556 | | | 0.04 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12589 ave 12589 max 12589 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.6437e+06 ave 1.6437e+06 max 1.6437e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1643698 Ave neighs/atom = 821.849 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.803590565789, Press = -4.57410736880844 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -2034.4588 -2034.4588 -2122.0488 -2122.0488 338.98214 338.98214 85001.731 85001.731 -144.53245 -144.53245 14000 -2037.7083 -2037.7083 -2126.4049 -2126.4049 343.26519 343.26519 84698.385 84698.385 -18.891485 -18.891485 Loop time of 89.3885 on 1 procs for 1000 steps with 2000 atoms Performance: 0.967 ns/day, 24.830 hours/ns, 11.187 timesteps/s 45.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 87.894 | 87.894 | 87.894 | 0.0 | 98.33 Neigh | 1.1535 | 1.1535 | 1.1535 | 0.0 | 1.29 Comm | 0.13476 | 0.13476 | 0.13476 | 0.0 | 0.15 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.17034 | 0.17034 | 0.17034 | 0.0 | 0.19 Other | | 0.03541 | | | 0.04 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12663 ave 12663 max 12663 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.65741e+06 ave 1.65741e+06 max 1.65741e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1657410 Ave neighs/atom = 828.705 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.073615845939, Press = -2.01985185406299 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -2037.7083 -2037.7083 -2126.4049 -2126.4049 343.26519 343.26519 84698.385 84698.385 -18.891485 -18.891485 15000 -2042.0363 -2042.0363 -2127.3588 -2127.3588 330.20687 330.20687 84411.508 84411.508 118.1966 118.1966 Loop time of 83.861 on 1 procs for 1000 steps with 2000 atoms Performance: 1.030 ns/day, 23.295 hours/ns, 11.924 timesteps/s 49.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 82.291 | 82.291 | 82.291 | 0.0 | 98.13 Neigh | 1.243 | 1.243 | 1.243 | 0.0 | 1.48 Comm | 0.13533 | 0.13533 | 0.13533 | 0.0 | 0.16 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.13554 | 0.13554 | 0.13554 | 0.0 | 0.16 Other | | 0.05601 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12715 ave 12715 max 12715 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.66357e+06 ave 1.66357e+06 max 1.66357e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1663570 Ave neighs/atom = 831.785 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.896896487361, Press = -1.04432543532938 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -2042.0363 -2042.0363 -2127.3588 -2127.3588 330.20687 330.20687 84411.508 84411.508 118.1966 118.1966 16000 -2039.7719 -2039.7719 -2126.6328 -2126.6328 336.16083 336.16083 84647.54 84647.54 -18.069669 -18.069669 Loop time of 80.8212 on 1 procs for 1000 steps with 2000 atoms Performance: 1.069 ns/day, 22.450 hours/ns, 12.373 timesteps/s 50.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 79.324 | 79.324 | 79.324 | 0.0 | 98.15 Neigh | 1.0202 | 1.0202 | 1.0202 | 0.0 | 1.26 Comm | 0.21556 | 0.21556 | 0.21556 | 0.0 | 0.27 Output | 4.3869e-05 | 4.3869e-05 | 4.3869e-05 | 0.0 | 0.00 Modify | 0.20549 | 0.20549 | 0.20549 | 0.0 | 0.25 Other | | 0.05552 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12721 ave 12721 max 12721 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.65891e+06 ave 1.65891e+06 max 1.65891e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1658906 Ave neighs/atom = 829.453 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.991461207478, Press = -1.32028529043816 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -2039.7719 -2039.7719 -2126.6328 -2126.6328 336.16083 336.16083 84647.54 84647.54 -18.069669 -18.069669 17000 -2039.4737 -2039.4737 -2124.613 -2124.613 329.4976 329.4976 84526.698 84526.698 82.517094 82.517094 Loop time of 75.8581 on 1 procs for 1000 steps with 2000 atoms Performance: 1.139 ns/day, 21.072 hours/ns, 13.183 timesteps/s 53.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 74.564 | 74.564 | 74.564 | 0.0 | 98.29 Neigh | 0.99328 | 0.99328 | 0.99328 | 0.0 | 1.31 Comm | 0.11479 | 0.11479 | 0.11479 | 0.0 | 0.15 Output | 5.4836e-05 | 5.4836e-05 | 5.4836e-05 | 0.0 | 0.00 Modify | 0.13019 | 0.13019 | 0.13019 | 0.0 | 0.17 Other | | 0.05557 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12673 ave 12673 max 12673 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.66092e+06 ave 1.66092e+06 max 1.66092e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1660920 Ave neighs/atom = 830.46 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.969961202893, Press = -0.809982693494966 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -2039.4737 -2039.4737 -2124.613 -2124.613 329.4976 329.4976 84526.698 84526.698 82.517094 82.517094 18000 -2036.4668 -2036.4668 -2124.2449 -2124.2449 339.7101 339.7101 84369.341 84369.341 235.08526 235.08526 Loop time of 73.0565 on 1 procs for 1000 steps with 2000 atoms Performance: 1.183 ns/day, 20.293 hours/ns, 13.688 timesteps/s 55.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 71.701 | 71.701 | 71.701 | 0.0 | 98.14 Neigh | 1.0395 | 1.0395 | 1.0395 | 0.0 | 1.42 Comm | 0.1549 | 0.1549 | 0.1549 | 0.0 | 0.21 Output | 2.5034e-05 | 2.5034e-05 | 2.5034e-05 | 0.0 | 0.00 Modify | 0.14534 | 0.14534 | 0.14534 | 0.0 | 0.20 Other | | 0.01567 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12705 ave 12705 max 12705 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.66491e+06 ave 1.66491e+06 max 1.66491e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1664912 Ave neighs/atom = 832.456 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.04207973171, Press = -0.336947227902562 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -2036.4668 -2036.4668 -2124.2449 -2124.2449 339.7101 339.7101 84369.341 84369.341 235.08526 235.08526 19000 -2038.4349 -2038.4349 -2124.7513 -2124.7513 334.05328 334.05328 84345.851 84345.851 212.17559 212.17559 Loop time of 70.4483 on 1 procs for 1000 steps with 2000 atoms Performance: 1.226 ns/day, 19.569 hours/ns, 14.195 timesteps/s 58.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.307 | 69.307 | 69.307 | 0.0 | 98.38 Neigh | 0.90506 | 0.90506 | 0.90506 | 0.0 | 1.28 Comm | 0.11493 | 0.11493 | 0.11493 | 0.0 | 0.16 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.10531 | 0.10531 | 0.10531 | 0.0 | 0.15 Other | | 0.01555 | | | 0.02 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12683 ave 12683 max 12683 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.66567e+06 ave 1.66567e+06 max 1.66567e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1665672 Ave neighs/atom = 832.836 Neighbor list builds = 14 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.111343368599, Press = 0.291034740971377 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.33 | 10.33 | 10.33 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -2038.4349 -2038.4349 -2124.7513 -2124.7513 334.05328 334.05328 84345.851 84345.851 212.17559 212.17559 20000 -2039.5497 -2039.5497 -2126.0213 -2126.0213 334.65406 334.65406 84399.559 84399.559 154.10056 154.10056 Loop time of 61.0975 on 1 procs for 1000 steps with 2000 atoms Performance: 1.414 ns/day, 16.972 hours/ns, 16.367 timesteps/s 66.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.133 | 60.133 | 60.133 | 0.0 | 98.42 Neigh | 0.68845 | 0.68845 | 0.68845 | 0.0 | 1.13 Comm | 0.095136 | 0.095136 | 0.095136 | 0.0 | 0.16 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.14559 | 0.14559 | 0.14559 | 0.0 | 0.24 Other | | 0.03556 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 12707 ave 12707 max 12707 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.66631e+06 ave 1.66631e+06 max 1.66631e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1666314 Ave neighs/atom = 833.157 Neighbor list builds = 13 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T333.15.out" else "print 'not_converged' file output/vol_T333.15.out" print '${V}' file output/vol_T333.15.out 84653.5009668872 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0