# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 4.427487522363663*${_u_distance} variable latticeconst_converted equal 4.427487522363663*1 lattice bcc ${latticeconst_converted} lattice bcc 4.42748752236366 Lattice spacing in x,y,z = 4.42749 4.42749 4.42749 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (44.2749 44.2749 44.2749) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms create_atoms CPU = 0.020328 secs variable mass_converted equal 22.98977*${_u_mass} variable mass_converted equal 22.98977*1 # specify which KIM Model to use pair_style kim Morse_Shifted_GirifalcoWeizer_1959LowCutoff_Na__MO_707981543254_003 WARNING: KIM Model does not provide `partialParticleVirial'; virial per atom will be zero (src/KIM/pair_kim.cpp:1089) pair_coeff * * Na mass 1 ${mass_converted} mass 1 22.98977 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 86790.4695107517 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 86790.4695107517/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 86790.4695107517/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 86790.4695107517/(1*1*${_u_distance}) variable V0_metal equal 86790.4695107517/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 86790.4695107517*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 86790.4695107517 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 16.313 ghost atom cutoff = 16.313 binsize = 8.1565, bins = 6 6 6 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 16.313 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 6.658 | 6.658 | 6.658 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -1935.4751 -1935.4751 -2000.8867 -2000.8867 253.15 253.15 86790.47 86790.47 805.01182 805.01182 1000 -1863.0281 -1863.0281 -1931.0233 -1931.0233 263.14846 263.14846 90036.009 90036.009 -41.90422 -41.90422 Loop time of 51.0294 on 1 procs for 1000 steps with 2000 atoms Performance: 1.693 ns/day, 14.175 hours/ns, 19.597 timesteps/s 37.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 50.144 | 50.144 | 50.144 | 0.0 | 98.27 Neigh | 0.61164 | 0.61164 | 0.61164 | 0.0 | 1.20 Comm | 0.07301 | 0.07301 | 0.07301 | 0.0 | 0.14 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.18646 | 0.18646 | 0.18646 | 0.0 | 0.37 Other | | 0.01385 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8688 ave 8688 max 8688 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 793530 ave 793530 max 793530 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 793530 Ave neighs/atom = 396.765 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -1863.0281 -1863.0281 -1931.0233 -1931.0233 263.14846 263.14846 90036.009 90036.009 -41.90422 -41.90422 2000 -1865.6772 -1865.6772 -1931.4318 -1931.4318 254.4771 254.4771 90098.336 90098.336 -106.02284 -106.02284 Loop time of 52.1849 on 1 procs for 1000 steps with 2000 atoms Performance: 1.656 ns/day, 14.496 hours/ns, 19.163 timesteps/s 36.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 51.112 | 51.112 | 51.112 | 0.0 | 97.94 Neigh | 0.73901 | 0.73901 | 0.73901 | 0.0 | 1.42 Comm | 0.11348 | 0.11348 | 0.11348 | 0.0 | 0.22 Output | 3.7909e-05 | 3.7909e-05 | 3.7909e-05 | 0.0 | 0.00 Modify | 0.18643 | 0.18643 | 0.18643 | 0.0 | 0.36 Other | | 0.0341 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8732 ave 8732 max 8732 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 793870 ave 793870 max 793870 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 793870 Ave neighs/atom = 396.935 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -1865.6772 -1865.6772 -1931.4318 -1931.4318 254.4771 254.4771 90098.336 90098.336 -106.02284 -106.02284 3000 -1868.7031 -1868.7031 -1931.4176 -1931.4176 242.71143 242.71143 89844.736 89844.736 -4.5031172 -4.5031172 Loop time of 49.6653 on 1 procs for 1000 steps with 2000 atoms Performance: 1.740 ns/day, 13.796 hours/ns, 20.135 timesteps/s 37.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.584 | 48.584 | 48.584 | 0.0 | 97.82 Neigh | 0.68201 | 0.68201 | 0.68201 | 0.0 | 1.37 Comm | 0.1871 | 0.1871 | 0.1871 | 0.0 | 0.38 Output | 3.8862e-05 | 3.8862e-05 | 3.8862e-05 | 0.0 | 0.00 Modify | 0.16635 | 0.16635 | 0.16635 | 0.0 | 0.33 Other | | 0.04609 | | | 0.09 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8723 ave 8723 max 8723 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 794434 ave 794434 max 794434 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 794434 Ave neighs/atom = 397.217 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -1868.7031 -1868.7031 -1931.4176 -1931.4176 242.71143 242.71143 89844.736 89844.736 -4.5031172 -4.5031172 4000 -1867.2718 -1867.2718 -1932.8725 -1932.8725 253.88156 253.88156 89535.329 89535.329 178.52585 178.52585 Loop time of 49.1268 on 1 procs for 1000 steps with 2000 atoms Performance: 1.759 ns/day, 13.646 hours/ns, 20.355 timesteps/s 38.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.119 | 48.119 | 48.119 | 0.0 | 97.95 Neigh | 0.65517 | 0.65517 | 0.65517 | 0.0 | 1.33 Comm | 0.072487 | 0.072487 | 0.072487 | 0.0 | 0.15 Output | 3.0041e-05 | 3.0041e-05 | 3.0041e-05 | 0.0 | 0.00 Modify | 0.20644 | 0.20644 | 0.20644 | 0.0 | 0.42 Other | | 0.07395 | | | 0.15 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8737 ave 8737 max 8737 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 797580 ave 797580 max 797580 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 797580 Ave neighs/atom = 398.79 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -1867.2718 -1867.2718 -1932.8725 -1932.8725 253.88156 253.88156 89535.329 89535.329 178.52585 178.52585 5000 -1866.3797 -1866.3797 -1931.2488 -1931.2488 251.05022 251.05022 89612.534 89612.534 155.97658 155.97658 Loop time of 49.7216 on 1 procs for 1000 steps with 2000 atoms Performance: 1.738 ns/day, 13.812 hours/ns, 20.112 timesteps/s 38.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.652 | 48.652 | 48.652 | 0.0 | 97.85 Neigh | 0.77588 | 0.77588 | 0.77588 | 0.0 | 1.56 Comm | 0.092935 | 0.092935 | 0.092935 | 0.0 | 0.19 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.14677 | 0.14677 | 0.14677 | 0.0 | 0.30 Other | | 0.05407 | | | 0.11 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8725 ave 8725 max 8725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 798456 ave 798456 max 798456 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 798456 Ave neighs/atom = 399.228 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 250.818809695938, Press = 230.506128283152 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -1866.3797 -1866.3797 -1931.2488 -1931.2488 251.05022 251.05022 89612.534 89612.534 155.97658 155.97658 6000 -1864.9334 -1864.9334 -1932.0917 -1932.0917 259.90962 259.90962 90198.157 90198.157 -152.80294 -152.80294 Loop time of 48.347 on 1 procs for 1000 steps with 2000 atoms Performance: 1.787 ns/day, 13.430 hours/ns, 20.684 timesteps/s 38.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.233 | 47.233 | 47.233 | 0.0 | 97.70 Neigh | 0.70011 | 0.70011 | 0.70011 | 0.0 | 1.45 Comm | 0.10952 | 0.10952 | 0.10952 | 0.0 | 0.23 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.27069 | 0.27069 | 0.27069 | 0.0 | 0.56 Other | | 0.03401 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8706 ave 8706 max 8706 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 792266 ave 792266 max 792266 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 792266 Ave neighs/atom = 396.133 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.937882705803, Press = 15.9143901028046 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -1864.9334 -1864.9334 -1932.0917 -1932.0917 259.90962 259.90962 90198.157 90198.157 -152.80294 -152.80294 7000 -1867.8997 -1867.8997 -1931.8709 -1931.8709 247.5752 247.5752 90173.833 90173.833 -182.00393 -182.00393 Loop time of 49.9164 on 1 procs for 1000 steps with 2000 atoms Performance: 1.731 ns/day, 13.866 hours/ns, 20.034 timesteps/s 37.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.833 | 48.833 | 48.833 | 0.0 | 97.83 Neigh | 0.75943 | 0.75943 | 0.75943 | 0.0 | 1.52 Comm | 0.052367 | 0.052367 | 0.052367 | 0.0 | 0.10 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.23786 | 0.23786 | 0.23786 | 0.0 | 0.48 Other | | 0.03393 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8713 ave 8713 max 8713 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 792304 ave 792304 max 792304 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 792304 Ave neighs/atom = 396.152 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.88729397886, Press = -1.58768637226467 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -1867.8997 -1867.8997 -1931.8709 -1931.8709 247.5752 247.5752 90173.833 90173.833 -182.00393 -182.00393 8000 -1865.2711 -1865.2711 -1931.2663 -1931.2663 255.40833 255.40833 89724.036 89724.036 115.35135 115.35135 Loop time of 47.9312 on 1 procs for 1000 steps with 2000 atoms Performance: 1.803 ns/day, 13.314 hours/ns, 20.863 timesteps/s 39.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.868 | 46.868 | 46.868 | 0.0 | 97.78 Neigh | 0.7261 | 0.7261 | 0.7261 | 0.0 | 1.51 Comm | 0.1126 | 0.1126 | 0.1126 | 0.0 | 0.23 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.1906 | 0.1906 | 0.1906 | 0.0 | 0.40 Other | | 0.03398 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8713 ave 8713 max 8713 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 794984 ave 794984 max 794984 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 794984 Ave neighs/atom = 397.492 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.943401415402, Press = -1.63352052477522 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -1865.2711 -1865.2711 -1931.2663 -1931.2663 255.40833 255.40833 89724.036 89724.036 115.35135 115.35135 9000 -1865.4612 -1865.4612 -1931.637 -1931.637 256.10713 256.10713 89791.826 89791.826 63.43472 63.43472 Loop time of 46.719 on 1 procs for 1000 steps with 2000 atoms Performance: 1.849 ns/day, 12.977 hours/ns, 21.405 timesteps/s 40.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 45.796 | 45.796 | 45.796 | 0.0 | 98.02 Neigh | 0.59528 | 0.59528 | 0.59528 | 0.0 | 1.27 Comm | 0.06324 | 0.06324 | 0.06324 | 0.0 | 0.14 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.25095 | 0.25095 | 0.25095 | 0.0 | 0.54 Other | | 0.01396 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8717 ave 8717 max 8717 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 796490 ave 796490 max 796490 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 796490 Ave neighs/atom = 398.245 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.007229852942, Press = 1.81700136840506 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -1865.4612 -1865.4612 -1931.637 -1931.637 256.10713 256.10713 89791.826 89791.826 63.43472 63.43472 10000 -1867.868 -1867.868 -1932.8534 -1932.8534 251.50003 251.50003 89833.59 89833.59 2.6464236 2.6464236 Loop time of 48.9899 on 1 procs for 1000 steps with 2000 atoms Performance: 1.764 ns/day, 13.608 hours/ns, 20.412 timesteps/s 38.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.926 | 47.926 | 47.926 | 0.0 | 97.83 Neigh | 0.68324 | 0.68324 | 0.68324 | 0.0 | 1.39 Comm | 0.13225 | 0.13225 | 0.13225 | 0.0 | 0.27 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.2104 | 0.2104 | 0.2104 | 0.0 | 0.43 Other | | 0.03787 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8728 ave 8728 max 8728 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 796238 ave 796238 max 796238 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 796238 Ave neighs/atom = 398.119 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.196820109269, Press = 3.06408491758416 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -1867.868 -1867.868 -1932.8534 -1932.8534 251.50003 251.50003 89833.59 89833.59 2.6464236 2.6464236 11000 -1863.6814 -1863.6814 -1929.3051 -1929.3051 253.97069 253.97069 90240.102 90240.102 -151.02838 -151.02838 Loop time of 49.7031 on 1 procs for 1000 steps with 2000 atoms Performance: 1.738 ns/day, 13.806 hours/ns, 20.119 timesteps/s 37.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.578 | 48.578 | 48.578 | 0.0 | 97.74 Neigh | 0.62808 | 0.62808 | 0.62808 | 0.0 | 1.26 Comm | 0.17239 | 0.17239 | 0.17239 | 0.0 | 0.35 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.29064 | 0.29064 | 0.29064 | 0.0 | 0.58 Other | | 0.03402 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8731 ave 8731 max 8731 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 792524 ave 792524 max 792524 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 792524 Ave neighs/atom = 396.262 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.060476664385, Press = 1.47376275216834 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -1863.6814 -1863.6814 -1929.3051 -1929.3051 253.97069 253.97069 90240.102 90240.102 -151.02838 -151.02838 12000 -1864.0475 -1864.0475 -1930.8858 -1930.8858 258.67136 258.67136 90210.177 90210.177 -144.78969 -144.78969 Loop time of 51.1378 on 1 procs for 1000 steps with 2000 atoms Performance: 1.690 ns/day, 14.205 hours/ns, 19.555 timesteps/s 36.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 50.094 | 50.094 | 50.094 | 0.0 | 97.96 Neigh | 0.70504 | 0.70504 | 0.70504 | 0.0 | 1.38 Comm | 0.092813 | 0.092813 | 0.092813 | 0.0 | 0.18 Output | 3.0041e-05 | 3.0041e-05 | 3.0041e-05 | 0.0 | 0.00 Modify | 0.17156 | 0.17156 | 0.17156 | 0.0 | 0.34 Other | | 0.07391 | | | 0.14 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8721 ave 8721 max 8721 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 790348 ave 790348 max 790348 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 790348 Ave neighs/atom = 395.174 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.198095014889, Press = -0.426176372753035 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -1864.0475 -1864.0475 -1930.8858 -1930.8858 258.67136 258.67136 90210.177 90210.177 -144.78969 -144.78969 13000 -1863.6532 -1863.6532 -1929.8619 -1929.8619 256.2344 256.2344 89886.232 89886.232 29.252781 29.252781 Loop time of 48.2737 on 1 procs for 1000 steps with 2000 atoms Performance: 1.790 ns/day, 13.409 hours/ns, 20.715 timesteps/s 38.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.169 | 47.169 | 47.169 | 0.0 | 97.71 Neigh | 0.68825 | 0.68825 | 0.68825 | 0.0 | 1.43 Comm | 0.17246 | 0.17246 | 0.17246 | 0.0 | 0.36 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.21022 | 0.21022 | 0.21022 | 0.0 | 0.44 Other | | 0.03395 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8719 ave 8719 max 8719 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 792224 ave 792224 max 792224 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 792224 Ave neighs/atom = 396.112 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.314639221442, Press = -0.907838353444393 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -1863.6532 -1863.6532 -1929.8619 -1929.8619 256.2344 256.2344 89886.232 89886.232 29.252781 29.252781 14000 -1865.1318 -1865.1318 -1931.7898 -1931.7898 257.97304 257.97304 89588.022 89588.022 182.13538 182.13538 Loop time of 49.7973 on 1 procs for 1000 steps with 2000 atoms Performance: 1.735 ns/day, 13.833 hours/ns, 20.081 timesteps/s 37.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.67 | 48.67 | 48.67 | 0.0 | 97.74 Neigh | 0.67381 | 0.67381 | 0.67381 | 0.0 | 1.35 Comm | 0.1323 | 0.1323 | 0.1323 | 0.0 | 0.27 Output | 2.0981e-05 | 2.0981e-05 | 2.0981e-05 | 0.0 | 0.00 Modify | 0.18746 | 0.18746 | 0.18746 | 0.0 | 0.38 Other | | 0.134 | | | 0.27 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8730 ave 8730 max 8730 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 798656 ave 798656 max 798656 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 798656 Ave neighs/atom = 399.328 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.19894989389, Press = 1.84707110245314 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -1865.1318 -1865.1318 -1931.7898 -1931.7898 257.97304 257.97304 89588.022 89588.022 182.13538 182.13538 15000 -1867.3335 -1867.3335 -1933.0084 -1933.0084 254.16866 254.16866 89931.945 89931.945 -44.986144 -44.986144 Loop time of 48.5367 on 1 procs for 1000 steps with 2000 atoms Performance: 1.780 ns/day, 13.482 hours/ns, 20.603 timesteps/s 38.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.448 | 47.448 | 47.448 | 0.0 | 97.76 Neigh | 0.69192 | 0.69192 | 0.69192 | 0.0 | 1.43 Comm | 0.13261 | 0.13261 | 0.13261 | 0.0 | 0.27 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.23001 | 0.23001 | 0.23001 | 0.0 | 0.47 Other | | 0.03382 | | | 0.07 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8701 ave 8701 max 8701 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 796038 ave 796038 max 796038 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 796038 Ave neighs/atom = 398.019 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.223439880747, Press = 2.37121342222886 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -1867.3335 -1867.3335 -1933.0084 -1933.0084 254.16866 254.16866 89931.945 89931.945 -44.986144 -44.986144 16000 -1864.7981 -1864.7981 -1930.5102 -1930.5102 254.31256 254.31256 90167.622 90167.622 -126.65352 -126.65352 Loop time of 48.9646 on 1 procs for 1000 steps with 2000 atoms Performance: 1.765 ns/day, 13.601 hours/ns, 20.423 timesteps/s 38.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.959 | 47.959 | 47.959 | 0.0 | 97.95 Neigh | 0.62894 | 0.62894 | 0.62894 | 0.0 | 1.28 Comm | 0.21228 | 0.21228 | 0.21228 | 0.0 | 0.43 Output | 2.718e-05 | 2.718e-05 | 2.718e-05 | 0.0 | 0.00 Modify | 0.14996 | 0.14996 | 0.14996 | 0.0 | 0.31 Other | | 0.01394 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8711 ave 8711 max 8711 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 792758 ave 792758 max 792758 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 792758 Ave neighs/atom = 396.379 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.238380398364, Press = 0.77684437921863 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -1864.7981 -1864.7981 -1930.5102 -1930.5102 254.31256 254.31256 90167.622 90167.622 -126.65352 -126.65352 17000 -1867.8158 -1867.8158 -1933.1677 -1933.1677 252.91833 252.91833 89857.941 89857.941 -7.4762819 -7.4762819 Loop time of 46.4359 on 1 procs for 1000 steps with 2000 atoms Performance: 1.861 ns/day, 12.899 hours/ns, 21.535 timesteps/s 40.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 45.641 | 45.641 | 45.641 | 0.0 | 98.29 Neigh | 0.51831 | 0.51831 | 0.51831 | 0.0 | 1.12 Comm | 0.086328 | 0.086328 | 0.086328 | 0.0 | 0.19 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.17654 | 0.17654 | 0.17654 | 0.0 | 0.38 Other | | 0.01387 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8725 ave 8725 max 8725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 794752 ave 794752 max 794752 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 794752 Ave neighs/atom = 397.376 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.063689456315, Press = 0.276643571014228 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -1867.8158 -1867.8158 -1933.1677 -1933.1677 252.91833 252.91833 89857.941 89857.941 -7.4762819 -7.4762819 18000 -1865.6804 -1865.6804 -1930.3909 -1930.3909 250.43663 250.43663 89859.306 89859.306 23.237689 23.237689 Loop time of 44.6861 on 1 procs for 1000 steps with 2000 atoms Performance: 1.933 ns/day, 12.413 hours/ns, 22.378 timesteps/s 41.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.757 | 43.757 | 43.757 | 0.0 | 97.92 Neigh | 0.55303 | 0.55303 | 0.55303 | 0.0 | 1.24 Comm | 0.13217 | 0.13217 | 0.13217 | 0.0 | 0.30 Output | 2.1935e-05 | 2.1935e-05 | 2.1935e-05 | 0.0 | 0.00 Modify | 0.21027 | 0.21027 | 0.21027 | 0.0 | 0.47 Other | | 0.03399 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8723 ave 8723 max 8723 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 795272 ave 795272 max 795272 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 795272 Ave neighs/atom = 397.636 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.924764653689, Press = 0.146859108947709 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -1865.6804 -1865.6804 -1930.3909 -1930.3909 250.43663 250.43663 89859.306 89859.306 23.237689 23.237689 19000 -1866.0309 -1866.0309 -1931.1646 -1931.1646 252.07417 252.07417 89635.205 89635.205 143.27084 143.27084 Loop time of 45.3505 on 1 procs for 1000 steps with 2000 atoms Performance: 1.905 ns/day, 12.597 hours/ns, 22.050 timesteps/s 41.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.191 | 44.191 | 44.191 | 0.0 | 97.44 Neigh | 0.69612 | 0.69612 | 0.69612 | 0.0 | 1.53 Comm | 0.17248 | 0.17248 | 0.17248 | 0.0 | 0.38 Output | 5.4121e-05 | 5.4121e-05 | 5.4121e-05 | 0.0 | 0.00 Modify | 0.27726 | 0.27726 | 0.27726 | 0.0 | 0.61 Other | | 0.01384 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8743 ave 8743 max 8743 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 797024 ave 797024 max 797024 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 797024 Ave neighs/atom = 398.512 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.984633715794, Press = 0.319643364331661 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -1866.0309 -1866.0309 -1931.1646 -1931.1646 252.07417 252.07417 89635.205 89635.205 143.27084 143.27084 20000 -1868.234 -1868.234 -1934.5472 -1934.5472 256.63882 256.63882 89615.305 89615.305 114.84938 114.84938 Loop time of 45.0214 on 1 procs for 1000 steps with 2000 atoms Performance: 1.919 ns/day, 12.506 hours/ns, 22.212 timesteps/s 41.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.064 | 44.064 | 44.064 | 0.0 | 97.87 Neigh | 0.64159 | 0.64159 | 0.64159 | 0.0 | 1.43 Comm | 0.15197 | 0.15197 | 0.15197 | 0.0 | 0.34 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.1504 | 0.1504 | 0.1504 | 0.0 | 0.33 Other | | 0.01383 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8733 ave 8733 max 8733 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 798184 ave 798184 max 798184 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 798184 Ave neighs/atom = 399.092 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.948325265867, Press = 1.10512435288662 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -1868.234 -1868.234 -1934.5472 -1934.5472 256.63882 256.63882 89615.305 89615.305 114.84938 114.84938 21000 -1866.5271 -1866.5271 -1931.2091 -1931.2091 250.32618 250.32618 90064.266 90064.266 -95.400343 -95.400343 Loop time of 45.084 on 1 procs for 1000 steps with 2000 atoms Performance: 1.916 ns/day, 12.523 hours/ns, 22.181 timesteps/s 41.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.964 | 43.964 | 43.964 | 0.0 | 97.52 Neigh | 0.70871 | 0.70871 | 0.70871 | 0.0 | 1.57 Comm | 0.092052 | 0.092052 | 0.092052 | 0.0 | 0.20 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.29066 | 0.29066 | 0.29066 | 0.0 | 0.64 Other | | 0.02803 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8729 ave 8729 max 8729 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 793446 ave 793446 max 793446 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 793446 Ave neighs/atom = 396.723 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.950636544782, Press = 0.854428313624508 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -1866.5271 -1866.5271 -1931.2091 -1931.2091 250.32618 250.32618 90064.266 90064.266 -95.400343 -95.400343 22000 -1869.5666 -1869.5666 -1932.0931 -1932.0931 241.98379 241.98379 90051.876 90051.876 -137.10344 -137.10344 Loop time of 44.1554 on 1 procs for 1000 steps with 2000 atoms Performance: 1.957 ns/day, 12.265 hours/ns, 22.647 timesteps/s 41.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.07 | 43.07 | 43.07 | 0.0 | 97.54 Neigh | 0.59039 | 0.59039 | 0.59039 | 0.0 | 1.34 Comm | 0.19153 | 0.19153 | 0.19153 | 0.0 | 0.43 Output | 4.5061e-05 | 4.5061e-05 | 4.5061e-05 | 0.0 | 0.00 Modify | 0.26988 | 0.26988 | 0.26988 | 0.0 | 0.61 Other | | 0.03383 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8724 ave 8724 max 8724 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 791788 ave 791788 max 791788 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 791788 Ave neighs/atom = 395.894 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.942310797149, Press = -0.270148657050565 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -1869.5666 -1869.5666 -1932.0931 -1932.0931 241.98379 241.98379 90051.876 90051.876 -137.10344 -137.10344 23000 -1865.9661 -1865.9661 -1931.0488 -1931.0488 251.87677 251.87677 89833.836 89833.836 38.452837 38.452837 Loop time of 44.2221 on 1 procs for 1000 steps with 2000 atoms Performance: 1.954 ns/day, 12.284 hours/ns, 22.613 timesteps/s 42.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.269 | 43.269 | 43.269 | 0.0 | 97.84 Neigh | 0.57727 | 0.57727 | 0.57727 | 0.0 | 1.31 Comm | 0.17183 | 0.17183 | 0.17183 | 0.0 | 0.39 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.17038 | 0.17038 | 0.17038 | 0.0 | 0.39 Other | | 0.03389 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8715 ave 8715 max 8715 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 794888 ave 794888 max 794888 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 794888 Ave neighs/atom = 397.444 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.886211745109, Press = -0.12362159496615 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -1865.9661 -1865.9661 -1931.0488 -1931.0488 251.87677 251.87677 89833.836 89833.836 38.452837 38.452837 24000 -1861.8257 -1861.8257 -1929.6743 -1929.6743 262.58103 262.58103 89854.655 89854.655 70.922203 70.922203 Loop time of 42.7273 on 1 procs for 1000 steps with 2000 atoms Performance: 2.022 ns/day, 11.869 hours/ns, 23.404 timesteps/s 43.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.863 | 41.863 | 41.863 | 0.0 | 97.98 Neigh | 0.57825 | 0.57825 | 0.57825 | 0.0 | 1.35 Comm | 0.092144 | 0.092144 | 0.092144 | 0.0 | 0.22 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.16043 | 0.16043 | 0.16043 | 0.0 | 0.38 Other | | 0.03386 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8725 ave 8725 max 8725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 795074 ave 795074 max 795074 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 795074 Ave neighs/atom = 397.537 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.027887871092, Press = 0.453419106414614 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -1861.8257 -1861.8257 -1929.6743 -1929.6743 262.58103 262.58103 89854.655 89854.655 70.922203 70.922203 25000 -1865.9961 -1865.9961 -1932.1841 -1932.1841 256.15405 256.15405 89822.409 89822.409 32.206627 32.206627 Loop time of 43.5506 on 1 procs for 1000 steps with 2000 atoms Performance: 1.984 ns/day, 12.097 hours/ns, 22.962 timesteps/s 42.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.645 | 42.645 | 42.645 | 0.0 | 97.92 Neigh | 0.52763 | 0.52763 | 0.52763 | 0.0 | 1.21 Comm | 0.13214 | 0.13214 | 0.13214 | 0.0 | 0.30 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.19196 | 0.19196 | 0.19196 | 0.0 | 0.44 Other | | 0.05406 | | | 0.12 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8714 ave 8714 max 8714 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 795856 ave 795856 max 795856 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 795856 Ave neighs/atom = 397.928 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.110809438672, Press = 0.451640810044707 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -1865.9961 -1865.9961 -1932.1841 -1932.1841 256.15405 256.15405 89822.409 89822.409 32.206627 32.206627 26000 -1863.023 -1863.023 -1929.4427 -1929.4427 257.05119 257.05119 89827.038 89827.038 86.455731 86.455731 Loop time of 42.457 on 1 procs for 1000 steps with 2000 atoms Performance: 2.035 ns/day, 11.794 hours/ns, 23.553 timesteps/s 43.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.591 | 41.591 | 41.591 | 0.0 | 97.96 Neigh | 0.45129 | 0.45129 | 0.45129 | 0.0 | 1.06 Comm | 0.13188 | 0.13188 | 0.13188 | 0.0 | 0.31 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.2695 | 0.2695 | 0.2695 | 0.0 | 0.63 Other | | 0.01378 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8715 ave 8715 max 8715 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 795464 ave 795464 max 795464 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 795464 Ave neighs/atom = 397.732 Neighbor list builds = 11 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.107570919316, Press = 0.301964790852733 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 26000 -1863.023 -1863.023 -1929.4427 -1929.4427 257.05119 257.05119 89827.038 89827.038 86.455731 86.455731 27000 -1865.3675 -1865.3675 -1931.9729 -1931.9729 257.77002 257.77002 89888.047 89888.047 6.7052511 6.7052511 Loop time of 42.2288 on 1 procs for 1000 steps with 2000 atoms Performance: 2.046 ns/day, 11.730 hours/ns, 23.681 timesteps/s 44.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.261 | 41.261 | 41.261 | 0.0 | 97.71 Neigh | 0.5898 | 0.5898 | 0.5898 | 0.0 | 1.40 Comm | 0.07202 | 0.07202 | 0.07202 | 0.0 | 0.17 Output | 2.3127e-05 | 2.3127e-05 | 2.3127e-05 | 0.0 | 0.00 Modify | 0.23167 | 0.23167 | 0.23167 | 0.0 | 0.55 Other | | 0.07393 | | | 0.18 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8717 ave 8717 max 8717 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 797512 ave 797512 max 797512 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 797512 Ave neighs/atom = 398.756 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.198610616595, Press = 1.15227195454122 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.662 | 6.662 | 6.662 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 27000 -1865.3675 -1865.3675 -1931.9729 -1931.9729 257.77002 257.77002 89888.047 89888.047 6.7052511 6.7052511 28000 -1865.8956 -1865.8956 -1929.9658 -1929.9658 247.95858 247.95858 90360.854 90360.854 -250.27019 -250.27019 Loop time of 41.4118 on 1 procs for 1000 steps with 2000 atoms Performance: 2.086 ns/day, 11.503 hours/ns, 24.148 timesteps/s 45.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.58 | 40.58 | 40.58 | 0.0 | 97.99 Neigh | 0.51235 | 0.51235 | 0.51235 | 0.0 | 1.24 Comm | 0.13242 | 0.13242 | 0.13242 | 0.0 | 0.32 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.17261 | 0.17261 | 0.17261 | 0.0 | 0.42 Other | | 0.01392 | | | 0.03 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8715 ave 8715 max 8715 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 790164 ave 790164 max 790164 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 790164 Ave neighs/atom = 395.082 Neighbor list builds = 12 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 89894.2017491233 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0