AttributeError: module 'posixpath' has no attribute 'exits' Traceback (most recent call last): File "/usr/local/bin/run_openkim_job.py", line 552, in execute_in_place(runner, runner_driver, subject, subject_driver, env) File "/usr/local/bin/run_openkim_job.py", line 396, in execute_in_place if os.path.exits(KIM_TOOLS_LOG_FILE): AttributeError: module 'posixpath' has no attribute 'exits' output/pipeline.stdout: ----------------------- ============================================================================================================================================================ Finished with optimization============================================================================================================================================================ Final lattice Constants: a = [2.94130278] Angstroms, c = [4.80312732] Angstroms, c/a = 1.632993 Total energy: -19.39877157879824 eV Cohesive energy: -4.84969289469956 eV/atom============================================================================================================================================================ output/pipeline.stderr: ----------------------- /anvil/scratch/x-bwaters/jobs/jobs/3e50fe1e-c0cc-476c-bf17-1d6671e70761-007/TE_433102354515_005-and-MO_748534961139_006-1752093325/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Ti__TE_433102354515_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:181: FutureWarning: Please use atoms.calc = calc atoms.set_calculator(calc)/anvil/scratch/x-bwaters/jobs/jobs/3e50fe1e-c0cc-476c-bf17-1d6671e70761-007/TE_433102354515_005-and-MO_748534961139_006-1752093325/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Ti__TE_433102354515_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:334: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) for init_guess_c in np.arange(/anvil/scratch/x-bwaters/jobs/jobs/3e50fe1e-c0cc-476c-bf17-1d6671e70761-007/TE_433102354515_005-and-MO_748534961139_006-1752093325/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Ti__TE_433102354515_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:134: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) return math.sqrt(hrDist * hrDist + vDist * vDist)/anvil/scratch/x-bwaters/jobs/jobs/3e50fe1e-c0cc-476c-bf17-1d6671e70761-007/TE_433102354515_005-and-MO_748534961139_006-1752093325/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Ti__TE_433102354515_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:420: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) float(minLatticeConstants[1] / minLatticeConstants[0]),/anvil/scratch/x-bwaters/jobs/jobs/3e50fe1e-c0cc-476c-bf17-1d6671e70761-007/TE_433102354515_005-and-MO_748534961139_006-1752093325/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Ti__TE_433102354515_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:429: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) float(minLatticeConstants[0]),/anvil/scratch/x-bwaters/jobs/jobs/3e50fe1e-c0cc-476c-bf17-1d6671e70761-007/TE_433102354515_005-and-MO_748534961139_006-1752093325/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Ti__TE_433102354515_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:430: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) float(minLatticeConstants[1]),{"realtime":5.28,"usertime":3.88,"systime":4.93,"memmax":117172,"memavg":0} output/kim.log: --------------- 2025-07-09:16:40:06EDT * 2 * information * 0x5592ce750a10_0x5592ce7519d0 * KIM_LogImplementation.cpp:243 * Log object renamed. ID changed from '0x5592ce7519d0'.2025-07-09:16:40:06EDT * 3 * information * 0x5592ce750a10_0x5592ce7519d0 * EAM_Implementation.cpp:1562 * Register argument supportStatus2025-07-09:16:40:06EDT * 4 * information * 0x5592ce750a10_0x5592ce7519d0 * EAM_Implementation.cpp:1581 * Register callback supportStatus2025-07-09:16:40:06EDT * 5 * information * 0x5592cd790950_0x5592cd790e10 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:40:06EDT * 2 * information * 0x5592cd790950 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:40:06EDT * 5 * information * 0x5592cd790ec0_0x5592cd792a00 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:40:06EDT * 2 * information * 0x5592cd790ec0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:40:06EDT * 5 * information * 0x5592cd7a9f20_0x5592cd7aac50 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:40:06EDT * 2 * information * 0x5592cd7a9f20 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:40:06EDT * 5 * information * 0x5592cd7ac580_0x5592cd7ad700 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:40:06EDT * 2 * information * 0x5592cd7ac580 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:40:06EDT * 5 * information * 0x5592cd7aeaa0_0x5592cdf72840 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:40:06EDT * 2 * information * 0x5592cd7aeaa0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:40:06EDT * 5 * information * 0x5592ce210eb0_0x5592ce211e50 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:40:06EDT * 2 * information * 0x5592ce210eb0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:40:06EDT * 5 * information * 0x5592ce4b0530_0x5592ce4b1550 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:40:06EDT * 2 * information * 0x5592ce4b0530 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:40:06EDT * 2 * warning * 0x5592ce750a10 * EAM_Implementation.hpp:475 * Particles has density value outside of embedding function interpolation domain, but as LAMMPS equivalence was requested, ignoring2025-07-09:16:40:09EDT * 0 * information * 0x5592ce750a10_0x5592ce7519d0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:40:09EDT * 0 * information * 0x5592ce750a10 * KIM_LogImplementation.cpp:119 * Log object destroyed. output/kim-tools.log: ---------------------