# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.165197603404522*${_u_distance} variable latticeconst_converted equal 3.165197603404522*1 lattice bcc ${latticeconst_converted} lattice bcc 3.16519760340452 Lattice spacing in x,y,z = 3.1651976 3.1651976 3.1651976 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (31.651976 31.651976 31.651976) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (31.651976 31.651976 31.651976) create_atoms CPU = 0.003 seconds variable mass_converted equal 183.84*${_u_mass} variable mass_converted equal 183.84*1 kim_interactions W WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions W #=== BEGIN kim interactions ================================== pair_style kim EAM_Dynamo_MasonNguyenManhBecquart_2017_W__MO_268730733493_000 pair_coeff * * W #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 183.84 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 31710.4558090515 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 31710.4558090515/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 31710.4558090515/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 31710.4558090515/(1*1*${_u_distance}) variable V0_metal equal 31710.4558090515/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 31710.4558090515*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 31710.4558090515 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 273.15*${_u_temperature} variable temp_converted equal 273.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 273.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "273.15 - 0.2" variable T_up equal "273.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_268730733493_000#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.403 ghost atom cutoff = 6.403 binsize = 3.2015, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.403 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.755 | 3.755 | 3.755 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -17729.425 -17729.425 -17800.004 -17800.004 273.15 273.15 31710.456 31710.456 2377.3825 2377.3825 1000 -17657.077 -17657.077 -17724.367 -17724.367 260.42209 260.42209 31834.687 31834.687 -2373.5907 -2373.5907 Loop time of 10.6208 on 1 procs for 1000 steps with 2000 atoms Performance: 8.135 ns/day, 2.950 hours/ns, 94.155 timesteps/s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 10.066 | 10.066 | 10.066 | 0.0 | 94.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10451 | 0.10451 | 0.10451 | 0.0 | 0.98 Output | 0.00020298 | 0.00020298 | 0.00020298 | 0.0 | 0.00 Modify | 0.3848 | 0.3848 | 0.3848 | 0.0 | 3.62 Other | | 0.06512 | | | 0.61 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4119.00 ave 4119 max 4119 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 128000.0 ave 128000 max 128000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 128000 Ave neighs/atom = 64.000000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.403 ghost atom cutoff = 6.403 binsize = 3.2015, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.403 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.755 | 3.755 | 3.755 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -17657.077 -17657.077 -17724.367 -17724.367 260.42209 260.42209 31834.687 31834.687 -2373.5907 -2373.5907 2000 -17656.642 -17656.642 -17724.673 -17724.673 263.28697 263.28697 31770.638 31770.638 4077.099 4077.099 Loop time of 10.6666 on 1 procs for 1000 steps with 2000 atoms Performance: 8.100 ns/day, 2.963 hours/ns, 93.751 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 10.121 | 10.121 | 10.121 | 0.0 | 94.89 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10318 | 0.10318 | 0.10318 | 0.0 | 0.97 Output | 0.00019535 | 0.00019535 | 0.00019535 | 0.0 | 0.00 Modify | 0.37679 | 0.37679 | 0.37679 | 0.0 | 3.53 Other | | 0.06494 | | | 0.61 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4052.00 ave 4052 max 4052 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 126228.0 ave 126228 max 126228 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 126228 Ave neighs/atom = 63.114000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.403 ghost atom cutoff = 6.403 binsize = 3.2015, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.403 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.755 | 3.755 | 3.755 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -17656.642 -17656.642 -17724.673 -17724.673 263.28697 263.28697 31770.638 31770.638 4077.099 4077.099 3000 -17658.436 -17658.436 -17731.722 -17731.722 283.62608 283.62608 31842.008 31842.008 -2892.9061 -2892.9061 Loop time of 10.3511 on 1 procs for 1000 steps with 2000 atoms Performance: 8.347 ns/day, 2.875 hours/ns, 96.608 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 9.8403 | 9.8403 | 9.8403 | 0.0 | 95.07 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.098476 | 0.098476 | 0.098476 | 0.0 | 0.95 Output | 0.00019078 | 0.00019078 | 0.00019078 | 0.0 | 0.00 Modify | 0.35132 | 0.35132 | 0.35132 | 0.0 | 3.39 Other | | 0.06081 | | | 0.59 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4056.00 ave 4056 max 4056 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 126338.0 ave 126338 max 126338 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 126338 Ave neighs/atom = 63.169000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.403 ghost atom cutoff = 6.403 binsize = 3.2015, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.403 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.754 | 3.754 | 3.754 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -17658.436 -17658.436 -17731.722 -17731.722 283.62608 283.62608 31842.008 31842.008 -2892.9061 -2892.9061 4000 -17655.379 -17655.379 -17729.315 -17729.315 286.13807 286.13807 31757.487 31757.487 3973.7743 3973.7743 Loop time of 10.314 on 1 procs for 1000 steps with 2000 atoms Performance: 8.377 ns/day, 2.865 hours/ns, 96.956 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 9.7972 | 9.7972 | 9.7972 | 0.0 | 94.99 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.097772 | 0.097772 | 0.097772 | 0.0 | 0.95 Output | 0.00019281 | 0.00019281 | 0.00019281 | 0.0 | 0.00 Modify | 0.35569 | 0.35569 | 0.35569 | 0.0 | 3.45 Other | | 0.06311 | | | 0.61 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4038.00 ave 4038 max 4038 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 126512.0 ave 126512 max 126512 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 126512 Ave neighs/atom = 63.256000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.403 ghost atom cutoff = 6.403 binsize = 3.2015, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.403 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.754 | 3.754 | 3.754 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -17655.379 -17655.379 -17729.315 -17729.315 286.13807 286.13807 31757.487 31757.487 3973.7743 3973.7743 5000 -17658.783 -17658.783 -17728.423 -17728.423 269.51625 269.51625 31802.947 31802.947 74.191011 74.191011 Loop time of 10.1767 on 1 procs for 1000 steps with 2000 atoms Performance: 8.490 ns/day, 2.827 hours/ns, 98.263 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 9.6674 | 9.6674 | 9.6674 | 0.0 | 95.00 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.097182 | 0.097182 | 0.097182 | 0.0 | 0.95 Output | 0.00015178 | 0.00015178 | 0.00015178 | 0.0 | 0.00 Modify | 0.35042 | 0.35042 | 0.35042 | 0.0 | 3.44 Other | | 0.06156 | | | 0.60 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4038.00 ave 4038 max 4038 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 126444.0 ave 126444 max 126444 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 126444 Ave neighs/atom = 63.222000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.064297811107, Press = 12.5588787521685 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.403 ghost atom cutoff = 6.403 binsize = 3.2015, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.403 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.754 | 3.754 | 3.754 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -17658.783 -17658.783 -17728.423 -17728.423 269.51625 269.51625 31802.947 31802.947 74.191011 74.191011 6000 -17655.867 -17655.867 -17726.145 -17726.145 271.98186 271.98186 31803.103 31803.103 342.89362 342.89362 Loop time of 10.4111 on 1 procs for 1000 steps with 2000 atoms Performance: 8.299 ns/day, 2.892 hours/ns, 96.051 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 9.8825 | 9.8825 | 9.8825 | 0.0 | 94.92 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.098158 | 0.098158 | 0.098158 | 0.0 | 0.94 Output | 0.00015656 | 0.00015656 | 0.00015656 | 0.0 | 0.00 Modify | 0.36889 | 0.36889 | 0.36889 | 0.0 | 3.54 Other | | 0.06142 | | | 0.59 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4031.00 ave 4031 max 4031 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 126394.0 ave 126394 max 126394 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 126394 Ave neighs/atom = 63.197000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.097822653451, Press = 57.3372409664694 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.403 ghost atom cutoff = 6.403 binsize = 3.2015, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.403 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.754 | 3.754 | 3.754 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -17655.867 -17655.867 -17726.145 -17726.145 271.98186 271.98186 31803.103 31803.103 342.89362 342.89362 7000 -17656.966 -17656.966 -17728.49 -17728.49 276.8058 276.8058 31818.718 31818.718 -1024.0402 -1024.0402 Loop time of 10.0845 on 1 procs for 1000 steps with 2000 atoms Performance: 8.568 ns/day, 2.801 hours/ns, 99.162 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 9.5668 | 9.5668 | 9.5668 | 0.0 | 94.87 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.095649 | 0.095649 | 0.095649 | 0.0 | 0.95 Output | 0.00015424 | 0.00015424 | 0.00015424 | 0.0 | 0.00 Modify | 0.36057 | 0.36057 | 0.36057 | 0.0 | 3.58 Other | | 0.06128 | | | 0.61 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4029.00 ave 4029 max 4029 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 126342.0 ave 126342 max 126342 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 126342 Ave neighs/atom = 63.171000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.131003687084, Press = 15.4738927062192 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.403 ghost atom cutoff = 6.403 binsize = 3.2015, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.403 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.754 | 3.754 | 3.754 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -17656.966 -17656.966 -17728.49 -17728.49 276.8058 276.8058 31818.718 31818.718 -1024.0402 -1024.0402 8000 -17660.353 -17660.353 -17729.024 -17729.024 265.76324 265.76324 31765.721 31765.721 3660.0536 3660.0536 Loop time of 10.122 on 1 procs for 1000 steps with 2000 atoms Performance: 8.536 ns/day, 2.812 hours/ns, 98.795 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 9.6031 | 9.6031 | 9.6031 | 0.0 | 94.87 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.095687 | 0.095687 | 0.095687 | 0.0 | 0.95 Output | 0.00015422 | 0.00015422 | 0.00015422 | 0.0 | 0.00 Modify | 0.36171 | 0.36171 | 0.36171 | 0.0 | 3.57 Other | | 0.06135 | | | 0.61 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4010.00 ave 4010 max 4010 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 126334.0 ave 126334 max 126334 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 126334 Ave neighs/atom = 63.167000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.510159783029, Press = 31.3377582287263 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.403 ghost atom cutoff = 6.403 binsize = 3.2015, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.403 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.754 | 3.754 | 3.754 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -17660.353 -17660.353 -17729.024 -17729.024 265.76324 265.76324 31765.721 31765.721 3660.0536 3660.0536 9000 -17658.082 -17658.082 -17726.672 -17726.672 265.44927 265.44927 31788.347 31788.347 1792.9262 1792.9262 Loop time of 10.3447 on 1 procs for 1000 steps with 2000 atoms Performance: 8.352 ns/day, 2.874 hours/ns, 96.668 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 9.8162 | 9.8162 | 9.8162 | 0.0 | 94.89 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.096926 | 0.096926 | 0.096926 | 0.0 | 0.94 Output | 0.00015681 | 0.00015681 | 0.00015681 | 0.0 | 0.00 Modify | 0.36953 | 0.36953 | 0.36953 | 0.0 | 3.57 Other | | 0.06197 | | | 0.60 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4036.00 ave 4036 max 4036 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 126440.0 ave 126440 max 126440 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 126440 Ave neighs/atom = 63.220000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.59621296065, Press = 9.12785148214071 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.403 ghost atom cutoff = 6.403 binsize = 3.2015, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.403 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.754 | 3.754 | 3.754 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -17658.082 -17658.082 -17726.672 -17726.672 265.44927 265.44927 31788.347 31788.347 1792.9262 1792.9262 10000 -17654.427 -17654.427 -17725.952 -17725.952 276.80748 276.80748 31812.061 31812.061 202.26542 202.26542 Loop time of 10.2393 on 1 procs for 1000 steps with 2000 atoms Performance: 8.438 ns/day, 2.844 hours/ns, 97.663 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 9.7116 | 9.7116 | 9.7116 | 0.0 | 94.85 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.09707 | 0.09707 | 0.09707 | 0.0 | 0.95 Output | 0.00015 | 0.00015 | 0.00015 | 0.0 | 0.00 Modify | 0.36902 | 0.36902 | 0.36902 | 0.0 | 3.60 Other | | 0.06143 | | | 0.60 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4009.00 ave 4009 max 4009 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 126384.0 ave 126384 max 126384 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 126384 Ave neighs/atom = 63.192000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.900700707003, Press = 3.4800959947265 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.403 ghost atom cutoff = 6.403 binsize = 3.2015, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.403 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.754 | 3.754 | 3.754 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -17654.427 -17654.427 -17725.952 -17725.952 276.80748 276.80748 31812.061 31812.061 202.26542 202.26542 11000 -17658.011 -17658.011 -17730.128 -17730.128 279.10122 279.10122 31821.94 31821.94 -1512.9831 -1512.9831 Loop time of 10.4709 on 1 procs for 1000 steps with 2000 atoms Performance: 8.251 ns/day, 2.909 hours/ns, 95.503 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 9.9301 | 9.9301 | 9.9301 | 0.0 | 94.84 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.098732 | 0.098732 | 0.098732 | 0.0 | 0.94 Output | 0.0001556 | 0.0001556 | 0.0001556 | 0.0 | 0.00 Modify | 0.3795 | 0.3795 | 0.3795 | 0.0 | 3.62 Other | | 0.06237 | | | 0.60 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4040.00 ave 4040 max 4040 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 126306.0 ave 126306 max 126306 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 126306 Ave neighs/atom = 63.153000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.263868553916, Press = 6.19327297762278 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.403 ghost atom cutoff = 6.403 binsize = 3.2015, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.403 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.754 | 3.754 | 3.754 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -17658.011 -17658.011 -17730.128 -17730.128 279.10122 279.10122 31821.94 31821.94 -1512.9831 -1512.9831 12000 -17655.089 -17655.089 -17725.691 -17725.691 273.23731 273.23731 31754.767 31754.767 4808.677 4808.677 Loop time of 9.92184 on 1 procs for 1000 steps with 2000 atoms Performance: 8.708 ns/day, 2.756 hours/ns, 100.788 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 9.4126 | 9.4126 | 9.4126 | 0.0 | 94.87 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.094118 | 0.094118 | 0.094118 | 0.0 | 0.95 Output | 0.00015769 | 0.00015769 | 0.00015769 | 0.0 | 0.00 Modify | 0.35345 | 0.35345 | 0.35345 | 0.0 | 3.56 Other | | 0.06148 | | | 0.62 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4037.00 ave 4037 max 4037 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 126390.0 ave 126390 max 126390 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 126390 Ave neighs/atom = 63.195000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.405232770555, Press = 14.9075365926709 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.403 ghost atom cutoff = 6.403 binsize = 3.2015, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.403 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.754 | 3.754 | 3.754 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -17655.089 -17655.089 -17725.691 -17725.691 273.23731 273.23731 31754.767 31754.767 4808.677 4808.677 13000 -17657.245 -17657.245 -17726.565 -17726.565 268.2738 268.2738 31819.711 31819.711 -684.97262 -684.97262 Loop time of 10.5544 on 1 procs for 1000 steps with 2000 atoms Performance: 8.186 ns/day, 2.932 hours/ns, 94.747 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 10.009 | 10.009 | 10.009 | 0.0 | 94.83 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.099596 | 0.099596 | 0.099596 | 0.0 | 0.94 Output | 0.00015773 | 0.00015773 | 0.00015773 | 0.0 | 0.00 Modify | 0.38262 | 0.38262 | 0.38262 | 0.0 | 3.63 Other | | 0.06286 | | | 0.60 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4034.00 ave 4034 max 4034 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 126458.0 ave 126458 max 126458 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 126458 Ave neighs/atom = 63.229000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.215112502185, Press = 4.81840216082156 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.403 ghost atom cutoff = 6.403 binsize = 3.2015, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.403 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.754 | 3.754 | 3.754 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -17657.245 -17657.245 -17726.565 -17726.565 268.2738 268.2738 31819.711 31819.711 -684.97262 -684.97262 14000 -17655.738 -17655.738 -17727.788 -17727.788 278.839 278.839 31811.312 31811.312 -653.98645 -653.98645 Loop time of 10.2428 on 1 procs for 1000 steps with 2000 atoms Performance: 8.435 ns/day, 2.845 hours/ns, 97.630 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 9.7167 | 9.7167 | 9.7167 | 0.0 | 94.86 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.096197 | 0.096197 | 0.096197 | 0.0 | 0.94 Output | 0.00015536 | 0.00015536 | 0.00015536 | 0.0 | 0.00 Modify | 0.36827 | 0.36827 | 0.36827 | 0.0 | 3.60 Other | | 0.06142 | | | 0.60 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4017.00 ave 4017 max 4017 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 126310.0 ave 126310 max 126310 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 126310 Ave neighs/atom = 63.155000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.981206084183, Press = 8.16504188128882 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.403 ghost atom cutoff = 6.403 binsize = 3.2015, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.403 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.754 | 3.754 | 3.754 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -17655.738 -17655.738 -17727.788 -17727.788 278.839 278.839 31811.312 31811.312 -653.98645 -653.98645 15000 -17658.315 -17658.315 -17729.063 -17729.063 273.80227 273.80227 31801.89 31801.89 482.43022 482.43022 Loop time of 10.2578 on 1 procs for 1000 steps with 2000 atoms Performance: 8.423 ns/day, 2.849 hours/ns, 97.487 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 9.7309 | 9.7309 | 9.7309 | 0.0 | 94.86 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.096636 | 0.096636 | 0.096636 | 0.0 | 0.94 Output | 0.00016085 | 0.00016085 | 0.00016085 | 0.0 | 0.00 Modify | 0.36839 | 0.36839 | 0.36839 | 0.0 | 3.59 Other | | 0.06169 | | | 0.60 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4028.00 ave 4028 max 4028 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 126350.0 ave 126350 max 126350 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 126350 Ave neighs/atom = 63.175000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.898986825192, Press = 2.63115980761114 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.403 ghost atom cutoff = 6.403 binsize = 3.2015, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.403 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.754 | 3.754 | 3.754 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -17658.315 -17658.315 -17729.063 -17729.063 273.80227 273.80227 31801.89 31801.89 482.43022 482.43022 16000 -17655.586 -17655.586 -17728.055 -17728.055 280.46143 280.46143 31815.934 31815.934 -1374.4913 -1374.4913 Loop time of 9.94571 on 1 procs for 1000 steps with 2000 atoms Performance: 8.687 ns/day, 2.763 hours/ns, 100.546 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 9.4346 | 9.4346 | 9.4346 | 0.0 | 94.86 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.094824 | 0.094824 | 0.094824 | 0.0 | 0.95 Output | 0.00015633 | 0.00015633 | 0.00015633 | 0.0 | 0.00 Modify | 0.35457 | 0.35457 | 0.35457 | 0.0 | 3.57 Other | | 0.06157 | | | 0.62 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4038.00 ave 4038 max 4038 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 126364.0 ave 126364 max 126364 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 126364 Ave neighs/atom = 63.182000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.896762347046, Press = 3.58006221283985 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.403 ghost atom cutoff = 6.403 binsize = 3.2015, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.403 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.754 | 3.754 | 3.754 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -17655.586 -17655.586 -17728.055 -17728.055 280.46143 280.46143 31815.934 31815.934 -1374.4913 -1374.4913 17000 -17657.912 -17657.912 -17726.237 -17726.237 264.42751 264.42751 31798.775 31798.775 313.19163 313.19163 Loop time of 10.7061 on 1 procs for 1000 steps with 2000 atoms Performance: 8.070 ns/day, 2.974 hours/ns, 93.404 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 10.157 | 10.157 | 10.157 | 0.0 | 94.87 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10053 | 0.10053 | 0.10053 | 0.0 | 0.94 Output | 0.00019874 | 0.00019874 | 0.00019874 | 0.0 | 0.00 Modify | 0.38566 | 0.38566 | 0.38566 | 0.0 | 3.60 Other | | 0.06266 | | | 0.59 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4036.00 ave 4036 max 4036 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 126330.0 ave 126330 max 126330 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 126330 Ave neighs/atom = 63.165000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.940158793765, Press = 7.25049461799379 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.403 ghost atom cutoff = 6.403 binsize = 3.2015, bins = 10 10 10 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.403 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 3.754 | 3.754 | 3.754 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -17657.912 -17657.912 -17726.237 -17726.237 264.42751 264.42751 31798.775 31798.775 313.19163 313.19163 18000 -17654.724 -17654.724 -17724.87 -17724.87 271.47266 271.47266 31783.369 31783.369 2205.8638 2205.8638 Loop time of 11.2557 on 1 procs for 1000 steps with 2000 atoms Performance: 7.676 ns/day, 3.127 hours/ns, 88.844 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 10.669 | 10.669 | 10.669 | 0.0 | 94.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10555 | 0.10555 | 0.10555 | 0.0 | 0.94 Output | 0.00019721 | 0.00019721 | 0.00019721 | 0.0 | 0.00 Modify | 0.41683 | 0.41683 | 0.41683 | 0.0 | 3.70 Other | | 0.06421 | | | 0.57 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4015.00 ave 4015 max 4015 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 126276.0 ave 126276 max 126276 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 126276 Ave neighs/atom = 63.138000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T273.15.out" else "print 'not_converged' file output/vol_T273.15.out" print '${V}' file output/vol_T273.15.out 31806.8802883404 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0