# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.79999965429306*${_u_distance} variable latticeconst_converted equal 3.79999965429306*1 lattice fcc ${latticeconst_converted} lattice fcc 3.79999965429306 Lattice spacing in x,y,z = 3.7999997 3.7999997 3.7999997 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (37.999997 37.999997 37.999997) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (37.999997 37.999997 37.999997) create_atoms CPU = 0.001 seconds variable mass_converted equal 102.9055*${_u_mass} variable mass_converted equal 102.9055*1 kim_interactions Rh WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Rh #=== BEGIN kim interactions ================================== variable kim_update equal 0 variable kim_periodic equal 1 pair_style adp pair_coeff * * /tmp/kim-shared-library-parameter-file-directory-XXXXXXVQAGYV/AuRh.adp.txt Rh #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 102.9055 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 54871.9850239767 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 54871.9850239767/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 54871.9850239767/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 54871.9850239767/(1*1*${_u_distance}) variable V0_metal equal 54871.9850239767/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 54871.9850239767*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 54871.9850239767 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/SM_066295357485_000#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 9.3498742 ghost atom cutoff = 9.3498742 binsize = 4.6749371, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair adp, perpetual attributes: half, newton on pair build: half/bin/atomonly/newton stencil: half/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.171 | 8.171 | 8.171 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -22848.467 -22848.467 -23000 -23000 293.15 293.15 54871.985 54871.985 2949.7001 2949.7001 1000 -22684.315 -22684.315 -22843.462 -22843.462 307.88134 307.88134 55337.339 55337.339 753.85834 753.85834 Loop time of 120.366 on 1 procs for 1000 steps with 4000 atoms Performance: 0.718 ns/day, 33.435 hours/ns, 8.308 timesteps/s 62.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 119.67 | 119.67 | 119.67 | 0.0 | 99.42 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.096279 | 0.096279 | 0.096279 | 0.0 | 0.08 Output | 0.00031752 | 0.00031752 | 0.00031752 | 0.0 | 0.00 Modify | 0.52496 | 0.52496 | 0.52496 | 0.0 | 0.44 Other | | 0.0736 | | | 0.06 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 496000.0 ave 496000 max 496000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 496000 Ave neighs/atom = 124.00000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.171 | 8.171 | 8.171 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -22684.315 -22684.315 -22843.462 -22843.462 307.88134 307.88134 55337.339 55337.339 753.85834 753.85834 2000 -22696.086 -22696.086 -22845.292 -22845.292 288.64968 288.64968 55354.489 55354.489 -665.08002 -665.08002 Loop time of 102.446 on 1 procs for 1000 steps with 4000 atoms Performance: 0.843 ns/day, 28.457 hours/ns, 9.761 timesteps/s 73.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 101.78 | 101.78 | 101.78 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.087434 | 0.087434 | 0.087434 | 0.0 | 0.09 Output | 0.00015925 | 0.00015925 | 0.00015925 | 0.0 | 0.00 Modify | 0.46434 | 0.46434 | 0.46434 | 0.0 | 0.45 Other | | 0.1118 | | | 0.11 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 476055.0 ave 476055 max 476055 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 476055 Ave neighs/atom = 119.01375 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.171 | 8.171 | 8.171 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -22696.086 -22696.086 -22845.292 -22845.292 288.64968 288.64968 55354.489 55354.489 -665.08002 -665.08002 3000 -22693.172 -22693.172 -22850.4 -22850.4 304.16814 304.16814 55334.362 55334.362 -124.09981 -124.09981 Loop time of 77.9818 on 1 procs for 1000 steps with 4000 atoms Performance: 1.108 ns/day, 21.662 hours/ns, 12.824 timesteps/s 95.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 77.5 | 77.5 | 77.5 | 0.0 | 99.38 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.074565 | 0.074565 | 0.074565 | 0.0 | 0.10 Output | 0.00036742 | 0.00036742 | 0.00036742 | 0.0 | 0.00 Modify | 0.34261 | 0.34261 | 0.34261 | 0.0 | 0.44 Other | | 0.06461 | | | 0.08 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8199.00 ave 8199 max 8199 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 475726.0 ave 475726 max 475726 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 475726 Ave neighs/atom = 118.93150 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.171 | 8.171 | 8.171 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -22693.172 -22693.172 -22850.4 -22850.4 304.16814 304.16814 55334.362 55334.362 -124.09981 -124.09981 4000 -22692.151 -22692.151 -22850.326 -22850.326 306.00127 306.00127 55304.69 55304.69 1275.3439 1275.3439 Loop time of 77.2975 on 1 procs for 1000 steps with 4000 atoms Performance: 1.118 ns/day, 21.472 hours/ns, 12.937 timesteps/s 95.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 76.814 | 76.814 | 76.814 | 0.0 | 99.37 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.073163 | 0.073163 | 0.073163 | 0.0 | 0.09 Output | 0.00016477 | 0.00016477 | 0.00016477 | 0.0 | 0.00 Modify | 0.35552 | 0.35552 | 0.35552 | 0.0 | 0.46 Other | | 0.0548 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 476076.0 ave 476076 max 476076 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 476076 Ave neighs/atom = 119.01900 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.171 | 8.171 | 8.171 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -22692.151 -22692.151 -22850.326 -22850.326 306.00127 306.00127 55304.69 55304.69 1275.3439 1275.3439 5000 -22695.723 -22695.723 -22847.753 -22847.753 294.11151 294.11151 55331.132 55331.132 188.68938 188.68938 Loop time of 84.5304 on 1 procs for 1000 steps with 4000 atoms Performance: 1.022 ns/day, 23.481 hours/ns, 11.830 timesteps/s 89.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 84.01 | 84.01 | 84.01 | 0.0 | 99.38 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.074718 | 0.074718 | 0.074718 | 0.0 | 0.09 Output | 0.00021712 | 0.00021712 | 0.00021712 | 0.0 | 0.00 Modify | 0.38937 | 0.38937 | 0.38937 | 0.0 | 0.46 Other | | 0.05582 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 476421.0 ave 476421 max 476421 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 476421 Ave neighs/atom = 119.10525 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.736665282486, Press = -259.928843292769 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.171 | 8.171 | 8.171 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -22695.723 -22695.723 -22847.753 -22847.753 294.11151 294.11151 55331.132 55331.132 188.68938 188.68938 6000 -22690.509 -22690.509 -22844.899 -22844.899 298.67781 298.67781 55346.925 55346.925 47.283229 47.283229 Loop time of 80.1103 on 1 procs for 1000 steps with 4000 atoms Performance: 1.079 ns/day, 22.253 hours/ns, 12.483 timesteps/s 92.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 79.6 | 79.6 | 79.6 | 0.0 | 99.36 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.090797 | 0.090797 | 0.090797 | 0.0 | 0.11 Output | 0.00012048 | 0.00012048 | 0.00012048 | 0.0 | 0.00 Modify | 0.36348 | 0.36348 | 0.36348 | 0.0 | 0.45 Other | | 0.05559 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 476154.0 ave 476154 max 476154 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 476154 Ave neighs/atom = 119.03850 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.608362669643, Press = -25.7403037011162 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.171 | 8.171 | 8.171 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -22690.509 -22690.509 -22844.899 -22844.899 298.67781 298.67781 55346.925 55346.925 47.283229 47.283229 7000 -22697.067 -22697.067 -22846.129 -22846.129 288.36995 288.36995 55363.082 55363.082 -1265.6753 -1265.6753 Loop time of 74.6261 on 1 procs for 1000 steps with 4000 atoms Performance: 1.158 ns/day, 20.729 hours/ns, 13.400 timesteps/s 96.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 74.177 | 74.177 | 74.177 | 0.0 | 99.40 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.069106 | 0.069106 | 0.069106 | 0.0 | 0.09 Output | 0.00010496 | 0.00010496 | 0.00010496 | 0.0 | 0.00 Modify | 0.32957 | 0.32957 | 0.32957 | 0.0 | 0.44 Other | | 0.0499 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 475909.0 ave 475909 max 475909 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 475909 Ave neighs/atom = 118.97725 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.001207134705, Press = -13.4415287445363 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -22697.067 -22697.067 -22846.129 -22846.129 288.36995 288.36995 55363.082 55363.082 -1265.6753 -1265.6753 8000 -22690.863 -22690.863 -22843.419 -22843.419 295.13055 295.13055 55386.88 55386.88 -1932.2324 -1932.2324 Loop time of 71.2357 on 1 procs for 1000 steps with 4000 atoms Performance: 1.213 ns/day, 19.788 hours/ns, 14.038 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 70.823 | 70.823 | 70.823 | 0.0 | 99.42 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.065478 | 0.065478 | 0.065478 | 0.0 | 0.09 Output | 0.0001129 | 0.0001129 | 0.0001129 | 0.0 | 0.00 Modify | 0.30045 | 0.30045 | 0.30045 | 0.0 | 0.42 Other | | 0.04644 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8201.00 ave 8201 max 8201 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 475540.0 ave 475540 max 475540 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 475540 Ave neighs/atom = 118.88500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.240578850608, Press = -11.5747577998528 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -22690.863 -22690.863 -22843.419 -22843.419 295.13055 295.13055 55386.88 55386.88 -1932.2324 -1932.2324 9000 -22693.699 -22693.699 -22844.571 -22844.571 291.87094 291.87094 55347.558 55347.558 -283.9548 -283.9548 Loop time of 67.8612 on 1 procs for 1000 steps with 4000 atoms Performance: 1.273 ns/day, 18.850 hours/ns, 14.736 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 67.465 | 67.465 | 67.465 | 0.0 | 99.42 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.063495 | 0.063495 | 0.063495 | 0.0 | 0.09 Output | 0.00010957 | 0.00010957 | 0.00010957 | 0.0 | 0.00 Modify | 0.28861 | 0.28861 | 0.28861 | 0.0 | 0.43 Other | | 0.04425 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 475211.0 ave 475211 max 475211 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 475211 Ave neighs/atom = 118.80275 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.434891054144, Press = -14.9323834688282 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -22693.699 -22693.699 -22844.571 -22844.571 291.87094 291.87094 55347.558 55347.558 -283.9548 -283.9548 10000 -22694.636 -22694.636 -22846.652 -22846.652 294.08574 294.08574 55324.445 55324.445 519.40935 519.40935 Loop time of 68.133 on 1 procs for 1000 steps with 4000 atoms Performance: 1.268 ns/day, 18.926 hours/ns, 14.677 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 67.737 | 67.737 | 67.737 | 0.0 | 99.42 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.063564 | 0.063564 | 0.063564 | 0.0 | 0.09 Output | 0.00011111 | 0.00011111 | 0.00011111 | 0.0 | 0.00 Modify | 0.28846 | 0.28846 | 0.28846 | 0.0 | 0.42 Other | | 0.04407 | | | 0.06 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 475943.0 ave 475943 max 475943 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 475943 Ave neighs/atom = 118.98575 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.746653174783, Press = -8.71576812219154 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -22694.636 -22694.636 -22846.652 -22846.652 294.08574 294.08574 55324.445 55324.445 519.40935 519.40935 11000 -22690.326 -22690.326 -22845.391 -22845.391 299.9832 299.9832 55305.25 55305.25 1696.6866 1696.6866 Loop time of 64.9426 on 1 procs for 1000 steps with 4000 atoms Performance: 1.330 ns/day, 18.040 hours/ns, 15.398 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 64.548 | 64.548 | 64.548 | 0.0 | 99.39 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.063314 | 0.063314 | 0.063314 | 0.0 | 0.10 Output | 0.0001134 | 0.0001134 | 0.0001134 | 0.0 | 0.00 Modify | 0.28751 | 0.28751 | 0.28751 | 0.0 | 0.44 Other | | 0.04345 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 476207.0 ave 476207 max 476207 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 476207 Ave neighs/atom = 119.05175 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.548002005403, Press = -7.65392560175633 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -22690.326 -22690.326 -22845.391 -22845.391 299.9832 299.9832 55305.25 55305.25 1696.6866 1696.6866 12000 -22694.256 -22694.256 -22842.802 -22842.802 287.37315 287.37315 55307.684 55307.684 1835.4619 1835.4619 Loop time of 64.0274 on 1 procs for 1000 steps with 4000 atoms Performance: 1.349 ns/day, 17.785 hours/ns, 15.618 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.633 | 63.633 | 63.633 | 0.0 | 99.38 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.063595 | 0.063595 | 0.063595 | 0.0 | 0.10 Output | 0.00010946 | 0.00010946 | 0.00010946 | 0.0 | 0.00 Modify | 0.28744 | 0.28744 | 0.28744 | 0.0 | 0.45 Other | | 0.04281 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 476520.0 ave 476520 max 476520 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 476520 Ave neighs/atom = 119.13000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.512291219696, Press = -1.20563975290298 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -22694.256 -22694.256 -22842.802 -22842.802 287.37315 287.37315 55307.684 55307.684 1835.4619 1835.4619 13000 -22682.847 -22682.847 -22841.693 -22841.693 307.29889 307.29889 55337.012 55337.012 739.52953 739.52953 Loop time of 64.1017 on 1 procs for 1000 steps with 4000 atoms Performance: 1.348 ns/day, 17.806 hours/ns, 15.600 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.709 | 63.709 | 63.709 | 0.0 | 99.39 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.063349 | 0.063349 | 0.063349 | 0.0 | 0.10 Output | 0.00011276 | 0.00011276 | 0.00011276 | 0.0 | 0.00 Modify | 0.28721 | 0.28721 | 0.28721 | 0.0 | 0.45 Other | | 0.04202 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8197.00 ave 8197 max 8197 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 476381.0 ave 476381 max 476381 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 476381 Ave neighs/atom = 119.09525 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.700118903273, Press = -1.04359019507035 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -22682.847 -22682.847 -22841.693 -22841.693 307.29889 307.29889 55337.012 55337.012 739.52953 739.52953 14000 -22695.935 -22695.935 -22846.842 -22846.842 291.94068 291.94068 55340.707 55340.707 -310.93153 -310.93153 Loop time of 64.0146 on 1 procs for 1000 steps with 4000 atoms Performance: 1.350 ns/day, 17.782 hours/ns, 15.621 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.621 | 63.621 | 63.621 | 0.0 | 99.38 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.063441 | 0.063441 | 0.063441 | 0.0 | 0.10 Output | 0.00011161 | 0.00011161 | 0.00011161 | 0.0 | 0.00 Modify | 0.2878 | 0.2878 | 0.2878 | 0.0 | 0.45 Other | | 0.04265 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8197.00 ave 8197 max 8197 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 475891.0 ave 475891 max 475891 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 475891 Ave neighs/atom = 118.97275 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.775221332863, Press = -0.641136937737006 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -22695.935 -22695.935 -22846.842 -22846.842 291.94068 291.94068 55340.707 55340.707 -310.93153 -310.93153 15000 -22694.196 -22694.196 -22844.65 -22844.65 291.06503 291.06503 55312.185 55312.185 1520.5471 1520.5471 Loop time of 64.033 on 1 procs for 1000 steps with 4000 atoms Performance: 1.349 ns/day, 17.787 hours/ns, 15.617 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.64 | 63.64 | 63.64 | 0.0 | 99.39 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.063039 | 0.063039 | 0.063039 | 0.0 | 0.10 Output | 0.00010947 | 0.00010947 | 0.00010947 | 0.0 | 0.00 Modify | 0.28741 | 0.28741 | 0.28741 | 0.0 | 0.45 Other | | 0.04214 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 475955.0 ave 475955 max 475955 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 475955 Ave neighs/atom = 118.98875 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.724295308987, Press = 1.52778611120253 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -22694.196 -22694.196 -22844.65 -22844.65 291.06503 291.06503 55312.185 55312.185 1520.5471 1520.5471 16000 -22697.987 -22697.987 -22847.344 -22847.344 288.9406 288.9406 55329.691 55329.691 311.22668 311.22668 Loop time of 63.7642 on 1 procs for 1000 steps with 4000 atoms Performance: 1.355 ns/day, 17.712 hours/ns, 15.683 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.371 | 63.371 | 63.371 | 0.0 | 99.38 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.06317 | 0.06317 | 0.06317 | 0.0 | 0.10 Output | 0.00011192 | 0.00011192 | 0.00011192 | 0.0 | 0.00 Modify | 0.28755 | 0.28755 | 0.28755 | 0.0 | 0.45 Other | | 0.04221 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 476278.0 ave 476278 max 476278 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 476278 Ave neighs/atom = 119.06950 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.484365360102, Press = 4.48421859921166 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -22697.987 -22697.987 -22847.344 -22847.344 288.9406 288.9406 55329.691 55329.691 311.22668 311.22668 17000 -22691.957 -22691.957 -22843.027 -22843.027 292.25583 292.25583 55361.3 55361.3 -732.55684 -732.55684 Loop time of 63.9999 on 1 procs for 1000 steps with 4000 atoms Performance: 1.350 ns/day, 17.778 hours/ns, 15.625 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.606 | 63.606 | 63.606 | 0.0 | 99.38 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.063495 | 0.063495 | 0.063495 | 0.0 | 0.10 Output | 0.00011125 | 0.00011125 | 0.00011125 | 0.0 | 0.00 Modify | 0.28818 | 0.28818 | 0.28818 | 0.0 | 0.45 Other | | 0.04216 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8197.00 ave 8197 max 8197 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 476139.0 ave 476139 max 476139 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 476139 Ave neighs/atom = 119.03475 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.37301413521, Press = -0.731982160992104 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -22691.957 -22691.957 -22843.027 -22843.027 292.25583 292.25583 55361.3 55361.3 -732.55684 -732.55684 18000 -22697.929 -22697.929 -22845.985 -22845.985 286.42464 286.42464 55332.133 55332.133 236.81699 236.81699 Loop time of 63.7907 on 1 procs for 1000 steps with 4000 atoms Performance: 1.354 ns/day, 17.720 hours/ns, 15.676 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.397 | 63.397 | 63.397 | 0.0 | 99.38 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.06337 | 0.06337 | 0.06337 | 0.0 | 0.10 Output | 0.0001101 | 0.0001101 | 0.0001101 | 0.0 | 0.00 Modify | 0.28763 | 0.28763 | 0.28763 | 0.0 | 0.45 Other | | 0.04217 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8198.00 ave 8198 max 8198 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 475541.0 ave 475541 max 475541 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 475541 Ave neighs/atom = 118.88525 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.261580394947, Press = -0.823347824033676 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -22697.929 -22697.929 -22845.985 -22845.985 286.42464 286.42464 55332.133 55332.133 236.81699 236.81699 19000 -22696.172 -22696.172 -22846.067 -22846.067 289.9834 289.9834 55337.622 55337.622 44.644716 44.644716 Loop time of 64.7843 on 1 procs for 1000 steps with 4000 atoms Performance: 1.334 ns/day, 17.996 hours/ns, 15.436 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 64.391 | 64.391 | 64.391 | 0.0 | 99.39 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.063483 | 0.063483 | 0.063483 | 0.0 | 0.10 Output | 0.00011063 | 0.00011063 | 0.00011063 | 0.0 | 0.00 Modify | 0.28727 | 0.28727 | 0.28727 | 0.0 | 0.44 Other | | 0.04236 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8199.00 ave 8199 max 8199 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 475985.0 ave 475985 max 475985 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 475985 Ave neighs/atom = 118.99625 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.300322334974, Press = -1.93654524018364 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -22696.172 -22696.172 -22846.067 -22846.067 289.9834 289.9834 55337.622 55337.622 44.644716 44.644716 20000 -22689.759 -22689.759 -22843.501 -22843.501 297.42522 297.42522 55334.503 55334.503 602.81818 602.81818 Loop time of 64.2408 on 1 procs for 1000 steps with 4000 atoms Performance: 1.345 ns/day, 17.845 hours/ns, 15.566 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.847 | 63.847 | 63.847 | 0.0 | 99.39 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.063642 | 0.063642 | 0.063642 | 0.0 | 0.10 Output | 0.00010604 | 0.00010604 | 0.00010604 | 0.0 | 0.00 Modify | 0.28747 | 0.28747 | 0.28747 | 0.0 | 0.45 Other | | 0.04242 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8199.00 ave 8199 max 8199 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 475961.0 ave 475961 max 475961 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 475961 Ave neighs/atom = 118.99025 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.37751915187, Press = -1.2473293266549 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -22689.759 -22689.759 -22843.501 -22843.501 297.42522 297.42522 55334.503 55334.503 602.81818 602.81818 21000 -22694.346 -22694.346 -22845.147 -22845.147 291.73394 291.73394 55329.403 55329.403 647.13769 647.13769 Loop time of 64.5247 on 1 procs for 1000 steps with 4000 atoms Performance: 1.339 ns/day, 17.924 hours/ns, 15.498 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 64.135 | 64.135 | 64.135 | 0.0 | 99.40 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.06243 | 0.06243 | 0.06243 | 0.0 | 0.10 Output | 0.00010413 | 0.00010413 | 0.00010413 | 0.0 | 0.00 Modify | 0.28523 | 0.28523 | 0.28523 | 0.0 | 0.44 Other | | 0.04169 | | | 0.06 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 475880.0 ave 475880 max 475880 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 475880 Ave neighs/atom = 118.97000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.380506690123, Press = -0.189932154018726 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -22694.346 -22694.346 -22845.147 -22845.147 291.73394 291.73394 55329.403 55329.403 647.13769 647.13769 22000 -22691.216 -22691.216 -22846.755 -22846.755 300.90058 300.90058 55353.42 55353.42 -563.36369 -563.36369 Loop time of 64.1939 on 1 procs for 1000 steps with 4000 atoms Performance: 1.346 ns/day, 17.832 hours/ns, 15.578 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.804 | 63.804 | 63.804 | 0.0 | 99.39 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.062242 | 0.062242 | 0.062242 | 0.0 | 0.10 Output | 0.00010862 | 0.00010862 | 0.00010862 | 0.0 | 0.00 Modify | 0.2852 | 0.2852 | 0.2852 | 0.0 | 0.44 Other | | 0.04186 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8197.00 ave 8197 max 8197 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 476123.0 ave 476123 max 476123 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 476123 Ave neighs/atom = 119.03075 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.381685602345, Press = -0.060729186005538 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -22691.216 -22691.216 -22846.755 -22846.755 300.90058 300.90058 55353.42 55353.42 -563.36369 -563.36369 23000 -22697.663 -22697.663 -22847.161 -22847.161 289.21418 289.21418 55316.772 55316.772 954.30283 954.30283 Loop time of 64.4238 on 1 procs for 1000 steps with 4000 atoms Performance: 1.341 ns/day, 17.896 hours/ns, 15.522 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 64.034 | 64.034 | 64.034 | 0.0 | 99.40 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.062504 | 0.062504 | 0.062504 | 0.0 | 0.10 Output | 0.00010364 | 0.00010364 | 0.00010364 | 0.0 | 0.00 Modify | 0.28498 | 0.28498 | 0.28498 | 0.0 | 0.44 Other | | 0.04204 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 475835.0 ave 475835 max 475835 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 475835 Ave neighs/atom = 118.95875 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.353442364993, Press = -0.728239268826347 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -22697.663 -22697.663 -22847.161 -22847.161 289.21418 289.21418 55316.772 55316.772 954.30283 954.30283 24000 -22694.439 -22694.439 -22844.355 -22844.355 290.02225 290.02225 55344.887 55344.887 81.770164 81.770164 Loop time of 64.7383 on 1 procs for 1000 steps with 4000 atoms Performance: 1.335 ns/day, 17.983 hours/ns, 15.447 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 64.349 | 64.349 | 64.349 | 0.0 | 99.40 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.062753 | 0.062753 | 0.062753 | 0.0 | 0.10 Output | 0.00012427 | 0.00012427 | 0.00012427 | 0.0 | 0.00 Modify | 0.2849 | 0.2849 | 0.2849 | 0.0 | 0.44 Other | | 0.04168 | | | 0.06 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 476346.0 ave 476346 max 476346 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 476346 Ave neighs/atom = 119.08650 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.219281436946, Press = -0.617687023923832 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -22694.439 -22694.439 -22844.355 -22844.355 290.02225 290.02225 55344.887 55344.887 81.770164 81.770164 25000 -22694.621 -22694.621 -22846.443 -22846.443 293.70861 293.70861 55377.149 55377.149 -1689.0192 -1689.0192 Loop time of 64.6085 on 1 procs for 1000 steps with 4000 atoms Performance: 1.337 ns/day, 17.947 hours/ns, 15.478 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 64.219 | 64.219 | 64.219 | 0.0 | 99.40 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.062587 | 0.062587 | 0.062587 | 0.0 | 0.10 Output | 0.00010369 | 0.00010369 | 0.00010369 | 0.0 | 0.00 Modify | 0.28501 | 0.28501 | 0.28501 | 0.0 | 0.44 Other | | 0.0419 | | | 0.06 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8201.00 ave 8201 max 8201 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 475721.0 ave 475721 max 475721 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 475721 Ave neighs/atom = 118.93025 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.210083340055, Press = 0.225236713074211 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -22694.621 -22694.621 -22846.443 -22846.443 293.70861 293.70861 55377.149 55377.149 -1689.0192 -1689.0192 26000 -22693.817 -22693.817 -22847.291 -22847.291 296.907 296.907 55383.997 55383.997 -2073.4613 -2073.4613 Loop time of 64.7452 on 1 procs for 1000 steps with 4000 atoms Performance: 1.334 ns/day, 17.985 hours/ns, 15.445 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 64.356 | 64.356 | 64.356 | 0.0 | 99.40 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.062552 | 0.062552 | 0.062552 | 0.0 | 0.10 Output | 0.00010993 | 0.00010993 | 0.00010993 | 0.0 | 0.00 Modify | 0.28499 | 0.28499 | 0.28499 | 0.0 | 0.44 Other | | 0.04186 | | | 0.06 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8199.00 ave 8199 max 8199 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 475505.0 ave 475505 max 475505 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 475505 Ave neighs/atom = 118.87625 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.14429408792, Press = -2.41626691917811 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 26000 -22693.817 -22693.817 -22847.291 -22847.291 296.907 296.907 55383.997 55383.997 -2073.4613 -2073.4613 27000 -22697.603 -22697.603 -22847.428 -22847.428 289.84751 289.84751 55339.026 55339.026 -206.5906 -206.5906 Loop time of 64.3478 on 1 procs for 1000 steps with 4000 atoms Performance: 1.343 ns/day, 17.874 hours/ns, 15.541 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.958 | 63.958 | 63.958 | 0.0 | 99.39 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.062581 | 0.062581 | 0.062581 | 0.0 | 0.10 Output | 0.00010394 | 0.00010394 | 0.00010394 | 0.0 | 0.00 Modify | 0.28496 | 0.28496 | 0.28496 | 0.0 | 0.44 Other | | 0.04192 | | | 0.07 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 475441.0 ave 475441 max 475441 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 475441 Ave neighs/atom = 118.86025 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.129018635054, Press = -3.26000299956991 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 27000 -22697.603 -22697.603 -22847.428 -22847.428 289.84751 289.84751 55339.026 55339.026 -206.5906 -206.5906 28000 -22691.473 -22691.473 -22844.021 -22844.021 295.11455 295.11455 55298.295 55298.295 2280.9034 2280.9034 Loop time of 66.5588 on 1 procs for 1000 steps with 4000 atoms Performance: 1.298 ns/day, 18.489 hours/ns, 15.024 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 66.169 | 66.169 | 66.169 | 0.0 | 99.41 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.062711 | 0.062711 | 0.062711 | 0.0 | 0.09 Output | 0.00010235 | 0.00010235 | 0.00010235 | 0.0 | 0.00 Modify | 0.28541 | 0.28541 | 0.28541 | 0.0 | 0.43 Other | | 0.04191 | | | 0.06 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 476033.0 ave 476033 max 476033 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 476033 Ave neighs/atom = 119.00825 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.052979871351, Press = -1.81849889287734 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 8.172 | 8.172 | 8.172 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 28000 -22691.473 -22691.473 -22844.021 -22844.021 295.11455 295.11455 55298.295 55298.295 2280.9034 2280.9034 29000 -22695.969 -22695.969 -22846.092 -22846.092 290.42333 290.42333 55301.476 55301.476 1888.9145 1888.9145 Loop time of 64.3291 on 1 procs for 1000 steps with 4000 atoms Performance: 1.343 ns/day, 17.869 hours/ns, 15.545 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.939 | 63.939 | 63.939 | 0.0 | 99.39 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.062194 | 0.062194 | 0.062194 | 0.0 | 0.10 Output | 0.00010354 | 0.00010354 | 0.00010354 | 0.0 | 0.00 Modify | 0.28559 | 0.28559 | 0.28559 | 0.0 | 0.44 Other | | 0.04176 | | | 0.06 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 476631.0 ave 476631 max 476631 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 476631 Ave neighs/atom = 119.15775 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 55341.5441231604 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0