# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.8000004738569264*${_u_distance} variable latticeconst_converted equal 3.8000004738569264*1 lattice fcc ${latticeconst_converted} lattice fcc 3.80000047385693 Lattice spacing in x,y,z = 3.8000005 3.8000005 3.8000005 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (38.000005 38.000005 38.000005) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (38.000005 38.000005 38.000005) create_atoms CPU = 0.001 seconds variable mass_converted equal 102.9055*${_u_mass} variable mass_converted equal 102.9055*1 kim_interactions Rh WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Rh #=== BEGIN kim interactions ================================== variable kim_update equal 0 variable kim_periodic equal 1 pair_style adp pair_coeff * * /tmp/kim-shared-library-parameter-file-directory-XXXXXXfpfFzu/NiRh.adp.txt Rh #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 102.9055 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 54872.0205274848 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 54872.0205274848/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 54872.0205274848/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 54872.0205274848/(1*1*${_u_distance}) variable V0_metal equal 54872.0205274848/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 54872.0205274848*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 54872.0205274848 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/SM_306597220004_000#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8.8454711 ghost atom cutoff = 8.8454711 binsize = 4.4227355, bins = 9 9 9 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair adp, perpetual attributes: half, newton on pair build: half/bin/atomonly/newton stencil: half/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -22869.144 -22869.144 -23000 -23000 253.15 253.15 54872.021 54872.021 2547.2845 2547.2845 1000 -22727.421 -22727.421 -22863.695 -22863.695 263.63168 263.63168 55211.009 55211.009 -1357.1882 -1357.1882 Loop time of 68.6049 on 1 procs for 1000 steps with 4000 atoms Performance: 1.259 ns/day, 19.057 hours/ns, 14.576 timesteps/s 74.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.015 | 68.015 | 68.015 | 0.0 | 99.14 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.089187 | 0.089187 | 0.089187 | 0.0 | 0.13 Output | 0.0004132 | 0.0004132 | 0.0004132 | 0.0 | 0.00 Modify | 0.41206 | 0.41206 | 0.41206 | 0.0 | 0.60 Other | | 0.08867 | | | 0.13 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 400000.0 ave 400000 max 400000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 400000 Ave neighs/atom = 100.00000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -22727.421 -22727.421 -22863.695 -22863.695 263.63168 263.63168 55211.009 55211.009 -1357.1882 -1357.1882 2000 -22738.018 -22738.018 -22870.113 -22870.113 255.54604 255.54604 55160.599 55160.599 560.2636 560.2636 Loop time of 63.1621 on 1 procs for 1000 steps with 4000 atoms Performance: 1.368 ns/day, 17.545 hours/ns, 15.832 timesteps/s 82.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 62.584 | 62.584 | 62.584 | 0.0 | 99.09 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.090785 | 0.090785 | 0.090785 | 0.0 | 0.14 Output | 0.0001568 | 0.0001568 | 0.0001568 | 0.0 | 0.00 Modify | 0.40888 | 0.40888 | 0.40888 | 0.0 | 0.65 Other | | 0.07798 | | | 0.12 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 405974.0 ave 405974 max 405974 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 405974 Ave neighs/atom = 101.49350 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -22738.018 -22738.018 -22870.113 -22870.113 255.54604 255.54604 55160.599 55160.599 560.2636 560.2636 3000 -22734.104 -22734.104 -22871.754 -22871.754 266.29391 266.29391 55212.862 55212.862 -1957.762 -1957.762 Loop time of 60.0091 on 1 procs for 1000 steps with 4000 atoms Performance: 1.440 ns/day, 16.669 hours/ns, 16.664 timesteps/s 85.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 59.451 | 59.451 | 59.451 | 0.0 | 99.07 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10804 | 0.10804 | 0.10804 | 0.0 | 0.18 Output | 0.00015196 | 0.00015196 | 0.00015196 | 0.0 | 0.00 Modify | 0.38547 | 0.38547 | 0.38547 | 0.0 | 0.64 Other | | 0.06462 | | | 0.11 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 405690.0 ave 405690 max 405690 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 405690 Ave neighs/atom = 101.42250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -22734.104 -22734.104 -22871.754 -22871.754 266.29391 266.29391 55212.862 55212.862 -1957.762 -1957.762 4000 -22734.996 -22734.996 -22872.176 -22872.176 265.38489 265.38489 55130.925 55130.925 1862.9456 1862.9456 Loop time of 49.8689 on 1 procs for 1000 steps with 4000 atoms Performance: 1.733 ns/day, 13.852 hours/ns, 20.053 timesteps/s 99.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 49.439 | 49.439 | 49.439 | 0.0 | 99.14 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.069874 | 0.069874 | 0.069874 | 0.0 | 0.14 Output | 0.00016312 | 0.00016312 | 0.00016312 | 0.0 | 0.00 Modify | 0.31056 | 0.31056 | 0.31056 | 0.0 | 0.62 Other | | 0.04939 | | | 0.10 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 405267.0 ave 405267 max 405267 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 405267 Ave neighs/atom = 101.31675 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -22734.996 -22734.996 -22872.176 -22872.176 265.38489 265.38489 55130.925 55130.925 1862.9456 1862.9456 5000 -22736.573 -22736.573 -22869.28 -22869.28 256.72981 256.72981 55196.435 55196.435 -1195.1269 -1195.1269 Loop time of 53.142 on 1 procs for 1000 steps with 4000 atoms Performance: 1.626 ns/day, 14.762 hours/ns, 18.817 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 52.663 | 52.663 | 52.663 | 0.0 | 99.10 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077347 | 0.077347 | 0.077347 | 0.0 | 0.15 Output | 0.00010778 | 0.00010778 | 0.00010778 | 0.0 | 0.00 Modify | 0.34581 | 0.34581 | 0.34581 | 0.0 | 0.65 Other | | 0.05606 | | | 0.11 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 405715.0 ave 405715 max 405715 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 405715 Ave neighs/atom = 101.42875 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 254.259234947856, Press = -31.618569715386 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -22736.573 -22736.573 -22869.28 -22869.28 256.72981 256.72981 55196.435 55196.435 -1195.1269 -1195.1269 6000 -22733.261 -22733.261 -22865.169 -22865.169 255.1859 255.1859 55204.718 55204.718 -1034.8396 -1034.8396 Loop time of 55.5665 on 1 procs for 1000 steps with 4000 atoms Performance: 1.555 ns/day, 15.435 hours/ns, 17.996 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 55.042 | 55.042 | 55.042 | 0.0 | 99.06 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.08276 | 0.08276 | 0.08276 | 0.0 | 0.15 Output | 0.00012033 | 0.00012033 | 0.00012033 | 0.0 | 0.00 Modify | 0.38134 | 0.38134 | 0.38134 | 0.0 | 0.69 Other | | 0.05992 | | | 0.11 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 405688.0 ave 405688 max 405688 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 405688 Ave neighs/atom = 101.42200 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.787024421779, Press = 40.6176538248637 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -22733.261 -22733.261 -22865.169 -22865.169 255.1859 255.1859 55204.718 55204.718 -1034.8396 -1034.8396 7000 -22737.47 -22737.47 -22865.888 -22865.888 248.43257 248.43257 55144.614 55144.614 1566.6567 1566.6567 Loop time of 51.7828 on 1 procs for 1000 steps with 4000 atoms Performance: 1.669 ns/day, 14.384 hours/ns, 19.311 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 51.307 | 51.307 | 51.307 | 0.0 | 99.08 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.073788 | 0.073788 | 0.073788 | 0.0 | 0.14 Output | 9.4244e-05 | 9.4244e-05 | 9.4244e-05 | 0.0 | 0.00 Modify | 0.34624 | 0.34624 | 0.34624 | 0.0 | 0.67 Other | | 0.0558 | | | 0.11 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 405462.0 ave 405462 max 405462 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 405462 Ave neighs/atom = 101.36550 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.061357620721, Press = 38.9495421699852 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -22737.47 -22737.47 -22865.888 -22865.888 248.43257 248.43257 55144.614 55144.614 1566.6567 1566.6567 8000 -22734.273 -22734.273 -22869.434 -22869.434 261.47689 261.47689 55139.228 55139.228 1667.4692 1667.4692 Loop time of 49.8327 on 1 procs for 1000 steps with 4000 atoms Performance: 1.734 ns/day, 13.842 hours/ns, 20.067 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 49.367 | 49.367 | 49.367 | 0.0 | 99.07 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.069896 | 0.069896 | 0.069896 | 0.0 | 0.14 Output | 0.00023142 | 0.00023142 | 0.00023142 | 0.0 | 0.00 Modify | 0.33831 | 0.33831 | 0.33831 | 0.0 | 0.68 Other | | 0.05739 | | | 0.12 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 406103.0 ave 406103 max 406103 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 406103 Ave neighs/atom = 101.52575 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.107233415116, Press = 11.3446632382168 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -22734.273 -22734.273 -22869.434 -22869.434 261.47689 261.47689 55139.228 55139.228 1667.4692 1667.4692 9000 -22735.965 -22735.965 -22865.67 -22865.67 250.92376 250.92376 55171.844 55171.844 424.75892 424.75892 Loop time of 49.3031 on 1 procs for 1000 steps with 4000 atoms Performance: 1.752 ns/day, 13.695 hours/ns, 20.283 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.857 | 48.857 | 48.857 | 0.0 | 99.10 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070044 | 0.070044 | 0.070044 | 0.0 | 0.14 Output | 0.00014588 | 0.00014588 | 0.00014588 | 0.0 | 0.00 Modify | 0.32518 | 0.32518 | 0.32518 | 0.0 | 0.66 Other | | 0.05033 | | | 0.10 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 405873.0 ave 405873 max 405873 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 405873 Ave neighs/atom = 101.46825 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.095578199827, Press = -2.15552999182441 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -22735.965 -22735.965 -22865.67 -22865.67 250.92376 250.92376 55171.844 55171.844 424.75892 424.75892 10000 -22736.754 -22736.754 -22865.904 -22865.904 249.84909 249.84909 55184.94 55184.94 -232.36691 -232.36691 Loop time of 50.0712 on 1 procs for 1000 steps with 4000 atoms Performance: 1.726 ns/day, 13.909 hours/ns, 19.972 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 49.614 | 49.614 | 49.614 | 0.0 | 99.09 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.071175 | 0.071175 | 0.071175 | 0.0 | 0.14 Output | 0.00021082 | 0.00021082 | 0.00021082 | 0.0 | 0.00 Modify | 0.33449 | 0.33449 | 0.33449 | 0.0 | 0.67 Other | | 0.05148 | | | 0.10 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 405742.0 ave 405742 max 405742 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 405742 Ave neighs/atom = 101.43550 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.173540637758, Press = 0.956620633378352 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -22736.754 -22736.754 -22865.904 -22865.904 249.84909 249.84909 55184.94 55184.94 -232.36691 -232.36691 11000 -22733.807 -22733.807 -22868.023 -22868.023 259.65033 259.65033 55228.329 55228.329 -2527.1683 -2527.1683 Loop time of 47.6505 on 1 procs for 1000 steps with 4000 atoms Performance: 1.813 ns/day, 13.236 hours/ns, 20.986 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.227 | 47.227 | 47.227 | 0.0 | 99.11 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.066805 | 0.066805 | 0.066805 | 0.0 | 0.14 Output | 0.00010725 | 0.00010725 | 0.00010725 | 0.0 | 0.00 Modify | 0.30772 | 0.30772 | 0.30772 | 0.0 | 0.65 Other | | 0.04844 | | | 0.10 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 405508.0 ave 405508 max 405508 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 405508 Ave neighs/atom = 101.37700 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.074292537614, Press = 4.47858831797873 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -22733.807 -22733.807 -22868.023 -22868.023 259.65033 259.65033 55228.329 55228.329 -2527.1683 -2527.1683 12000 -22737.239 -22737.239 -22868.137 -22868.137 253.23007 253.23007 55135.342 55135.342 1926.5729 1926.5729 Loop time of 47.1904 on 1 procs for 1000 steps with 4000 atoms Performance: 1.831 ns/day, 13.108 hours/ns, 21.191 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.773 | 46.773 | 46.773 | 0.0 | 99.12 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.06622 | 0.06622 | 0.06622 | 0.0 | 0.14 Output | 0.00012545 | 0.00012545 | 0.00012545 | 0.0 | 0.00 Modify | 0.30454 | 0.30454 | 0.30454 | 0.0 | 0.65 Other | | 0.04667 | | | 0.10 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 405375.0 ave 405375 max 405375 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 405375 Ave neighs/atom = 101.34375 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.082258366541, Press = 6.96453251098593 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -22737.239 -22737.239 -22868.137 -22868.137 253.23007 253.23007 55135.342 55135.342 1926.5729 1926.5729 13000 -22733.46 -22733.46 -22866.7 -22866.7 257.76134 257.76134 55166.28 55166.28 666.62679 666.62679 Loop time of 46.7596 on 1 procs for 1000 steps with 4000 atoms Performance: 1.848 ns/day, 12.989 hours/ns, 21.386 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.349 | 46.349 | 46.349 | 0.0 | 99.12 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.065166 | 0.065166 | 0.065166 | 0.0 | 0.14 Output | 0.00011225 | 0.00011225 | 0.00011225 | 0.0 | 0.00 Modify | 0.29891 | 0.29891 | 0.29891 | 0.0 | 0.64 Other | | 0.04632 | | | 0.10 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 405928.0 ave 405928 max 405928 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 405928 Ave neighs/atom = 101.48200 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.043964512932, Press = -2.98188867649651 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -22733.46 -22733.46 -22866.7 -22866.7 257.76134 257.76134 55166.28 55166.28 666.62679 666.62679 14000 -22736.231 -22736.231 -22862.887 -22862.887 245.02462 245.02462 55174.479 55174.479 371.42272 371.42272 Loop time of 47.0643 on 1 procs for 1000 steps with 4000 atoms Performance: 1.836 ns/day, 13.073 hours/ns, 21.248 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.65 | 46.65 | 46.65 | 0.0 | 99.12 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.065345 | 0.065345 | 0.065345 | 0.0 | 0.14 Output | 0.00011256 | 0.00011256 | 0.00011256 | 0.0 | 0.00 Modify | 0.30147 | 0.30147 | 0.30147 | 0.0 | 0.64 Other | | 0.0471 | | | 0.10 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 405647.0 ave 405647 max 405647 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 405647 Ave neighs/atom = 101.41175 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.888748853265, Press = 2.88204965000909 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -22736.231 -22736.231 -22862.887 -22862.887 245.02462 245.02462 55174.479 55174.479 371.42272 371.42272 15000 -22732.433 -22732.433 -22865.212 -22865.212 256.87141 256.87141 55151.676 55151.676 1361.6537 1361.6537 Loop time of 46.8798 on 1 procs for 1000 steps with 4000 atoms Performance: 1.843 ns/day, 13.022 hours/ns, 21.331 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.465 | 46.465 | 46.465 | 0.0 | 99.12 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.065558 | 0.065558 | 0.065558 | 0.0 | 0.14 Output | 0.00011011 | 0.00011011 | 0.00011011 | 0.0 | 0.00 Modify | 0.30175 | 0.30175 | 0.30175 | 0.0 | 0.64 Other | | 0.047 | | | 0.10 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 405949.0 ave 405949 max 405949 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 405949 Ave neighs/atom = 101.48725 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.863363881484, Press = 0.54630651567669 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -22732.433 -22732.433 -22865.212 -22865.212 256.87141 256.87141 55151.676 55151.676 1361.6537 1361.6537 16000 -22735.024 -22735.024 -22863.83 -22863.83 249.18549 249.18549 55210.637 55210.637 -1196.1658 -1196.1658 Loop time of 46.8012 on 1 procs for 1000 steps with 4000 atoms Performance: 1.846 ns/day, 13.000 hours/ns, 21.367 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.387 | 46.387 | 46.387 | 0.0 | 99.12 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.065272 | 0.065272 | 0.065272 | 0.0 | 0.14 Output | 0.00011506 | 0.00011506 | 0.00011506 | 0.0 | 0.00 Modify | 0.30138 | 0.30138 | 0.30138 | 0.0 | 0.64 Other | | 0.04701 | | | 0.10 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 406082.0 ave 406082 max 406082 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 406082 Ave neighs/atom = 101.52050 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.01072544669, Press = -0.653475680248543 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -22735.024 -22735.024 -22863.83 -22863.83 249.18549 249.18549 55210.637 55210.637 -1196.1658 -1196.1658 17000 -22734.471 -22734.471 -22864.734 -22864.734 252.0029 252.0029 55179.247 55179.247 118.22541 118.22541 Loop time of 46.6747 on 1 procs for 1000 steps with 4000 atoms Performance: 1.851 ns/day, 12.965 hours/ns, 21.425 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.261 | 46.261 | 46.261 | 0.0 | 99.11 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.065481 | 0.065481 | 0.065481 | 0.0 | 0.14 Output | 0.00010461 | 0.00010461 | 0.00010461 | 0.0 | 0.00 Modify | 0.30106 | 0.30106 | 0.30106 | 0.0 | 0.65 Other | | 0.04709 | | | 0.10 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 405531.0 ave 405531 max 405531 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 405531 Ave neighs/atom = 101.38275 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.050112352746, Press = 6.05380126676672 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -22734.471 -22734.471 -22864.734 -22864.734 252.0029 252.0029 55179.247 55179.247 118.22541 118.22541 18000 -22735.532 -22735.532 -22867.151 -22867.151 254.6269 254.6269 55150.027 55150.027 1268.1774 1268.1774 Loop time of 44.1582 on 1 procs for 1000 steps with 4000 atoms Performance: 1.957 ns/day, 12.266 hours/ns, 22.646 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.752 | 43.752 | 43.752 | 0.0 | 99.08 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.064098 | 0.064098 | 0.064098 | 0.0 | 0.15 Output | 0.00010386 | 0.00010386 | 0.00010386 | 0.0 | 0.00 Modify | 0.29615 | 0.29615 | 0.29615 | 0.0 | 0.67 Other | | 0.04567 | | | 0.10 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 405711.0 ave 405711 max 405711 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 405711 Ave neighs/atom = 101.42775 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.125447141982, Press = 4.33337255710226 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -22735.532 -22735.532 -22867.151 -22867.151 254.6269 254.6269 55150.027 55150.027 1268.1774 1268.1774 19000 -22738.778 -22738.778 -22869.385 -22869.385 252.66657 252.66657 55206.952 55206.952 -1577.8142 -1577.8142 Loop time of 43.7321 on 1 procs for 1000 steps with 4000 atoms Performance: 1.976 ns/day, 12.148 hours/ns, 22.866 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.338 | 43.338 | 43.338 | 0.0 | 99.10 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.063142 | 0.063142 | 0.063142 | 0.0 | 0.14 Output | 0.00010494 | 0.00010494 | 0.00010494 | 0.0 | 0.00 Modify | 0.28779 | 0.28779 | 0.28779 | 0.0 | 0.66 Other | | 0.04279 | | | 0.10 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 405817.0 ave 405817 max 405817 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 405817 Ave neighs/atom = 101.45425 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.004974148485, Press = 1.11268111931325 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -22738.778 -22738.778 -22869.385 -22869.385 252.66657 252.66657 55206.952 55206.952 -1577.8142 -1577.8142 20000 -22731.729 -22731.729 -22865.8 -22865.8 259.37003 259.37003 55213.839 55213.839 -1523.545 -1523.545 Loop time of 44.0213 on 1 procs for 1000 steps with 4000 atoms Performance: 1.963 ns/day, 12.228 hours/ns, 22.716 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.626 | 43.626 | 43.626 | 0.0 | 99.10 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.062932 | 0.062932 | 0.062932 | 0.0 | 0.14 Output | 7.7425e-05 | 7.7425e-05 | 7.7425e-05 | 0.0 | 0.00 Modify | 0.28972 | 0.28972 | 0.28972 | 0.0 | 0.66 Other | | 0.04293 | | | 0.10 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 405467.0 ave 405467 max 405467 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 405467 Ave neighs/atom = 101.36675 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.0084052477, Press = 2.12328559716455 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -22731.729 -22731.729 -22865.8 -22865.8 259.37003 259.37003 55213.839 55213.839 -1523.545 -1523.545 21000 -22736.854 -22736.854 -22867.577 -22867.577 252.89221 252.89221 55204.951 55204.951 -1365.9393 -1365.9393 Loop time of 43.9485 on 1 procs for 1000 steps with 4000 atoms Performance: 1.966 ns/day, 12.208 hours/ns, 22.754 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.558 | 43.558 | 43.558 | 0.0 | 99.11 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.062657 | 0.062657 | 0.062657 | 0.0 | 0.14 Output | 7.6036e-05 | 7.6036e-05 | 7.6036e-05 | 0.0 | 0.00 Modify | 0.28689 | 0.28689 | 0.28689 | 0.0 | 0.65 Other | | 0.04093 | | | 0.09 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 405457.0 ave 405457 max 405457 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 405457 Ave neighs/atom = 101.36425 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.036194699264, Press = 3.10442984111766 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -22736.854 -22736.854 -22867.577 -22867.577 252.89221 252.89221 55204.951 55204.951 -1365.9393 -1365.9393 22000 -22734.643 -22734.643 -22869.14 -22869.14 260.19371 260.19371 55124.201 55124.201 2307.6266 2307.6266 Loop time of 43.8655 on 1 procs for 1000 steps with 4000 atoms Performance: 1.970 ns/day, 12.185 hours/ns, 22.797 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.472 | 43.472 | 43.472 | 0.0 | 99.10 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.062817 | 0.062817 | 0.062817 | 0.0 | 0.14 Output | 0.00010448 | 0.00010448 | 0.00010448 | 0.0 | 0.00 Modify | 0.28863 | 0.28863 | 0.28863 | 0.0 | 0.66 Other | | 0.0423 | | | 0.10 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 405576.0 ave 405576 max 405576 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 405576 Ave neighs/atom = 101.39400 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.101631527862, Press = 3.36781806523946 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.790 | 7.790 | 7.790 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -22734.643 -22734.643 -22869.14 -22869.14 260.19371 260.19371 55124.201 55124.201 2307.6266 2307.6266 23000 -22738.051 -22738.051 -22867.579 -22867.579 250.58081 250.58081 55147.869 55147.869 1288.0009 1288.0009 Loop time of 43.8246 on 1 procs for 1000 steps with 4000 atoms Performance: 1.971 ns/day, 12.174 hours/ns, 22.818 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.431 | 43.431 | 43.431 | 0.0 | 99.10 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.062537 | 0.062537 | 0.062537 | 0.0 | 0.14 Output | 7.8468e-05 | 7.8468e-05 | 7.8468e-05 | 0.0 | 0.00 Modify | 0.28907 | 0.28907 | 0.28907 | 0.0 | 0.66 Other | | 0.04198 | | | 0.10 Nlocal: 4000.00 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195.00 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 406082.0 ave 406082 max 406082 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 406082 Ave neighs/atom = 101.52050 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 55178.5086234552 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0