* Error (Neighbor List) : "Collision of atoms 1 and 2. Their distance is 5.3152e-06. " : 205:kimpy/neighlist/neighbor_list.cpp * Error (Neighbor List) : "Collision of atoms 1 and 2. Their distance is 9.75862e-06. " : 205:kimpy/neighlist/neighbor_list.cpp Traceback (most recent call last): File "/work2/08773/bwaters/stampede2/bwaters/job-ce1f36b2-f4d3-497b-ae8e-bbefdeb6e5af-007-ee4e54dc-f4fe-4793-be50-7a279ec6a25c/TE_504776581501_000-and-MO_612732924171_002-1683686000/staged_job_files/repository/td/EquilibriumCrystalStructure__TD_457028483760_000/util/aflow_util.py", line 267, in aflow_command return subprocess.check_output(cmd_str, shell=True, stderr=subprocess.PIPE,encoding="utf-8") File "/usr/lib/python3.8/subprocess.py", line 415, in check_output return run(*popenargs, stdout=PIPE, timeout=timeout, check=True, File "/usr/lib/python3.8/subprocess.py", line 516, in run raise CalledProcessError(retcode, process.args, subprocess.CalledProcessError: Command 'aflow --np=1 --compare_materials -D compare --no_scale_volume --screen_only --quiet --print=json' returned non-zero exit status 32. During handling of the above exception, another exception occurred: Traceback (most recent call last): File "../../td/EquilibriumCrystalStructure__TD_457028483760_000/runner", line 181, in comparison=aflow.compare_materials_dir(COMPARE_DIR) File "/work2/08773/bwaters/stampede2/bwaters/job-ce1f36b2-f4d3-497b-ae8e-bbefdeb6e5af-007-ee4e54dc-f4fe-4793-be50-7a279ec6a25c/TE_504776581501_000-and-MO_612732924171_002-1683686000/staged_job_files/repository/td/EquilibriumCrystalStructure__TD_457028483760_000/util/aflow_util.py", line 309, in compare_materials_dir output=self.aflow_command([ File "/work2/08773/bwaters/stampede2/bwaters/job-ce1f36b2-f4d3-497b-ae8e-bbefdeb6e5af-007-ee4e54dc-f4fe-4793-be50-7a279ec6a25c/TE_504776581501_000-and-MO_612732924171_002-1683686000/staged_job_files/repository/td/EquilibriumCrystalStructure__TD_457028483760_000/util/aflow_util.py", line 272, in aflow_command raise RuntimeError("ERROR: unexpected error from aflow command %s , error code = %d\nstderr: %s" % (cmd_str, exc.returncode, exc.stderr)) RuntimeError: ERROR: unexpected error from aflow command aflow --np=1 --compare_materials -D compare --no_scale_volume --screen_only --quiet --print=json , error code = 32 stderr: Command exited with non-zero status 1 {"realtime":34.45,"usertime":57.08,"systime":79.21,"memmax":100844,"memavg":0}