# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 2.8296494334936138*${_u_distance} variable latticeconst_converted equal 2.8296494334936138*1 lattice bcc ${latticeconst_converted} lattice bcc 2.82964943349361 Lattice spacing in x,y,z = 2.8296494 2.8296494 2.8296494 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (28.296494 28.296494 28.296494) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (28.296494 28.296494 28.296494) create_atoms CPU = 0.002 seconds variable mass_converted equal 55.845*${_u_mass} variable mass_converted equal 55.845*1 kim_interactions Fe WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Fe #=== BEGIN kim interactions ================================== variable kim_update equal 0 variable kim_periodic equal 1 pair_style adp pair_coeff * * /tmp/kim-shared-library-parameter-file-directory-XXXXXXzjKl76/Fe_nmFe.2021.mod.adp.txt Fe #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 55.845 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 22656.7650870723 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 22656.7650870723/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 22656.7650870723/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 22656.7650870723/(1*1*${_u_distance}) variable V0_metal equal 22656.7650870723/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 22656.7650870723*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 22656.7650870723 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/SM_906654900816_000#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 8.1965966 ghost atom cutoff = 8.1965966 binsize = 4.0982983, bins = 7 7 7 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair adp, perpetual attributes: half, newton on pair build: half/bin/atomonly/newton stencil: half/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -8675.3902 -8675.3902 -8751.1375 -8751.1375 293.15 293.15 22656.765 22656.765 3571.023 3571.023 1000 -8595.8964 -8595.8964 -8669.9593 -8669.9593 286.63124 286.63124 22850.74 22850.74 2860.0357 2860.0357 Loop time of 75.1451 on 1 procs for 1000 steps with 2000 atoms Performance: 1.150 ns/day, 20.874 hours/ns, 13.308 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 74.156 | 74.156 | 74.156 | 0.0 | 98.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2071 | 0.2071 | 0.2071 | 0.0 | 0.28 Output | 0.00048686 | 0.00048686 | 0.00048686 | 0.0 | 0.00 Modify | 0.68305 | 0.68305 | 0.68305 | 0.0 | 0.91 Other | | 0.09802 | | | 0.13 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 180000.0 ave 180000 max 180000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 180000 Ave neighs/atom = 90.000000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -8595.8964 -8595.8964 -8669.9593 -8669.9593 286.63124 286.63124 22850.74 22850.74 2860.0357 2860.0357 2000 -8595.9063 -8595.9063 -8676.3279 -8676.3279 311.23962 311.23962 22880.127 22880.127 -145.2793 -145.2793 Loop time of 77.2045 on 1 procs for 1000 steps with 2000 atoms Performance: 1.119 ns/day, 21.446 hours/ns, 12.953 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 76.198 | 76.198 | 76.198 | 0.0 | 98.70 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21112 | 0.21112 | 0.21112 | 0.0 | 0.27 Output | 0.00027892 | 0.00027892 | 0.00027892 | 0.0 | 0.00 Modify | 0.68976 | 0.68976 | 0.68976 | 0.0 | 0.89 Other | | 0.1058 | | | 0.14 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 180156.0 ave 180156 max 180156 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 180156 Ave neighs/atom = 90.078000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -8595.9063 -8595.9063 -8676.3279 -8676.3279 311.23962 311.23962 22880.127 22880.127 -145.2793 -145.2793 3000 -8598.0551 -8598.0551 -8673.5039 -8673.5039 291.99471 291.99471 22894.329 22894.329 -1032.8925 -1032.8925 Loop time of 66.4176 on 1 procs for 1000 steps with 2000 atoms Performance: 1.301 ns/day, 18.449 hours/ns, 15.056 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 65.603 | 65.603 | 65.603 | 0.0 | 98.77 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17712 | 0.17712 | 0.17712 | 0.0 | 0.27 Output | 0.0002376 | 0.0002376 | 0.0002376 | 0.0 | 0.00 Modify | 0.55029 | 0.55029 | 0.55029 | 0.0 | 0.83 Other | | 0.08744 | | | 0.13 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 180011.0 ave 180011 max 180011 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 180011 Ave neighs/atom = 90.005500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -8598.0551 -8598.0551 -8673.5039 -8673.5039 291.99471 291.99471 22894.329 22894.329 -1032.8925 -1032.8925 4000 -8595.0368 -8595.0368 -8670.8219 -8670.8219 293.29641 293.29641 22902.74 22902.74 -1003.4581 -1003.4581 Loop time of 69.1114 on 1 procs for 1000 steps with 2000 atoms Performance: 1.250 ns/day, 19.198 hours/ns, 14.469 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.254 | 68.254 | 68.254 | 0.0 | 98.76 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.18642 | 0.18642 | 0.18642 | 0.0 | 0.27 Output | 0.00018632 | 0.00018632 | 0.00018632 | 0.0 | 0.00 Modify | 0.58608 | 0.58608 | 0.58608 | 0.0 | 0.85 Other | | 0.08517 | | | 0.12 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 180089.0 ave 180089 max 180089 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 180089 Ave neighs/atom = 90.044500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -8595.0368 -8595.0368 -8670.8219 -8670.8219 293.29641 293.29641 22902.74 22902.74 -1003.4581 -1003.4581 5000 -8598.8256 -8598.8256 -8676.7691 -8676.7691 301.64954 301.64954 22907.953 22907.953 -2607.5178 -2607.5178 Loop time of 63.1812 on 1 procs for 1000 steps with 2000 atoms Performance: 1.367 ns/day, 17.550 hours/ns, 15.827 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 62.396 | 62.396 | 62.396 | 0.0 | 98.76 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.16929 | 0.16929 | 0.16929 | 0.0 | 0.27 Output | 0.00014879 | 0.00014879 | 0.00014879 | 0.0 | 0.00 Modify | 0.52884 | 0.52884 | 0.52884 | 0.0 | 0.84 Other | | 0.08719 | | | 0.14 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 180013.0 ave 180013 max 180013 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 180013 Ave neighs/atom = 90.006500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.801970522006, Press = 131.678039936658 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -8598.8256 -8598.8256 -8676.7691 -8676.7691 301.64954 301.64954 22907.953 22907.953 -2607.5178 -2607.5178 6000 -8595.7613 -8595.7613 -8670.9531 -8670.9531 290.99992 290.99992 22928.855 22928.855 -3132.1782 -3132.1782 Loop time of 62.5497 on 1 procs for 1000 steps with 2000 atoms Performance: 1.381 ns/day, 17.375 hours/ns, 15.987 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 61.758 | 61.758 | 61.758 | 0.0 | 98.73 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.16917 | 0.16917 | 0.16917 | 0.0 | 0.27 Output | 0.00015101 | 0.00015101 | 0.00015101 | 0.0 | 0.00 Modify | 0.53866 | 0.53866 | 0.53866 | 0.0 | 0.86 Other | | 0.08375 | | | 0.13 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 180032.0 ave 180032 max 180032 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 180032 Ave neighs/atom = 90.016000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.438643442008, Press = -29.6827344764761 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -8595.7613 -8595.7613 -8670.9531 -8670.9531 290.99992 290.99992 22928.855 22928.855 -3132.1782 -3132.1782 7000 -8599.1191 -8599.1191 -8668.8933 -8668.8933 270.03334 270.03334 22894.026 22894.026 -490.18107 -490.18107 Loop time of 70.1578 on 1 procs for 1000 steps with 2000 atoms Performance: 1.232 ns/day, 19.488 hours/ns, 14.254 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.23 | 69.23 | 69.23 | 0.0 | 98.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1918 | 0.1918 | 0.1918 | 0.0 | 0.27 Output | 0.00023805 | 0.00023805 | 0.00023805 | 0.0 | 0.00 Modify | 0.63898 | 0.63898 | 0.63898 | 0.0 | 0.91 Other | | 0.09701 | | | 0.14 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 179948.0 ave 179948 max 179948 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 179948 Ave neighs/atom = 89.974000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.857136513689, Press = -33.9740713270476 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -8599.1191 -8599.1191 -8668.8933 -8668.8933 270.03334 270.03334 22894.026 22894.026 -490.18107 -490.18107 8000 -8593.1056 -8593.1056 -8668.2291 -8668.2291 290.73576 290.73576 22879.047 22879.047 1069.5694 1069.5694 Loop time of 59.3151 on 1 procs for 1000 steps with 2000 atoms Performance: 1.457 ns/day, 16.476 hours/ns, 16.859 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.567 | 58.567 | 58.567 | 0.0 | 98.74 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.16093 | 0.16093 | 0.16093 | 0.0 | 0.27 Output | 0.00023508 | 0.00023508 | 0.00023508 | 0.0 | 0.00 Modify | 0.50508 | 0.50508 | 0.50508 | 0.0 | 0.85 Other | | 0.08204 | | | 0.14 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 180070.0 ave 180070 max 180070 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 180070 Ave neighs/atom = 90.035000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.999467167678, Press = -0.593240995675472 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -8593.1056 -8593.1056 -8668.2291 -8668.2291 290.73576 290.73576 22879.047 22879.047 1069.5694 1069.5694 9000 -8597.0523 -8597.0523 -8672.962 -8672.962 293.77849 293.77849 22872.463 22872.463 784.8269 784.8269 Loop time of 56.0968 on 1 procs for 1000 steps with 2000 atoms Performance: 1.540 ns/day, 15.582 hours/ns, 17.826 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 55.411 | 55.411 | 55.411 | 0.0 | 98.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15032 | 0.15032 | 0.15032 | 0.0 | 0.27 Output | 0.00015119 | 0.00015119 | 0.00015119 | 0.0 | 0.00 Modify | 0.46132 | 0.46132 | 0.46132 | 0.0 | 0.82 Other | | 0.07404 | | | 0.13 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 180102.0 ave 180102 max 180102 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 180102 Ave neighs/atom = 90.051000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.63289841575, Press = 3.89063404690629 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -8597.0523 -8597.0523 -8672.962 -8672.962 293.77849 293.77849 22872.463 22872.463 784.8269 784.8269 10000 -8594.338 -8594.338 -8671.2665 -8671.2665 297.72113 297.72113 22872.873 22872.873 986.94627 986.94627 Loop time of 49.8632 on 1 procs for 1000 steps with 2000 atoms Performance: 1.733 ns/day, 13.851 hours/ns, 20.055 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 49.259 | 49.259 | 49.259 | 0.0 | 98.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13526 | 0.13526 | 0.13526 | 0.0 | 0.27 Output | 0.00027096 | 0.00027096 | 0.00027096 | 0.0 | 0.00 Modify | 0.39966 | 0.39966 | 0.39966 | 0.0 | 0.80 Other | | 0.06903 | | | 0.14 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 180100.0 ave 180100 max 180100 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 180100 Ave neighs/atom = 90.050000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.621287723142, Press = 7.26127462166251 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -8594.338 -8594.338 -8671.2665 -8671.2665 297.72113 297.72113 22872.873 22872.873 986.94627 986.94627 11000 -8595.9415 -8595.9415 -8671.1105 -8671.1105 290.91178 290.91178 22859.502 22859.502 1843.8282 1843.8282 Loop time of 48.7887 on 1 procs for 1000 steps with 2000 atoms Performance: 1.771 ns/day, 13.552 hours/ns, 20.497 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.205 | 48.205 | 48.205 | 0.0 | 98.80 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13147 | 0.13147 | 0.13147 | 0.0 | 0.27 Output | 0.00014986 | 0.00014986 | 0.00014986 | 0.0 | 0.00 Modify | 0.38535 | 0.38535 | 0.38535 | 0.0 | 0.79 Other | | 0.06712 | | | 0.14 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 180120.0 ave 180120 max 180120 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 180120 Ave neighs/atom = 90.060000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 294.089247284551, Press = 9.16074567358523 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -8595.9415 -8595.9415 -8671.1105 -8671.1105 290.91178 290.91178 22859.502 22859.502 1843.8282 1843.8282 12000 -8599.6964 -8599.6964 -8675.3252 -8675.3252 292.69142 292.69142 22853.076 22853.076 1950.7564 1950.7564 Loop time of 48.6481 on 1 procs for 1000 steps with 2000 atoms Performance: 1.776 ns/day, 13.513 hours/ns, 20.556 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.055 | 48.055 | 48.055 | 0.0 | 98.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13237 | 0.13237 | 0.13237 | 0.0 | 0.27 Output | 0.00020602 | 0.00020602 | 0.00020602 | 0.0 | 0.00 Modify | 0.39218 | 0.39218 | 0.39218 | 0.0 | 0.81 Other | | 0.06879 | | | 0.14 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 180158.0 ave 180158 max 180158 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 180158 Ave neighs/atom = 90.079000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.876957536552, Press = 17.6859436257348 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -8599.6964 -8599.6964 -8675.3252 -8675.3252 292.69142 292.69142 22853.076 22853.076 1950.7564 1950.7564 13000 -8595.7822 -8595.7822 -8672.56 -8672.56 297.1383 297.1383 22892.562 22892.562 -641.05488 -641.05488 Loop time of 49.7498 on 1 procs for 1000 steps with 2000 atoms Performance: 1.737 ns/day, 13.819 hours/ns, 20.101 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 49.149 | 49.149 | 49.149 | 0.0 | 98.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13432 | 0.13432 | 0.13432 | 0.0 | 0.27 Output | 0.00015344 | 0.00015344 | 0.00015344 | 0.0 | 0.00 Modify | 0.39757 | 0.39757 | 0.39757 | 0.0 | 0.80 Other | | 0.0689 | | | 0.14 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 180083.0 ave 180083 max 180083 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 180083 Ave neighs/atom = 90.041500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.758133053904, Press = 13.6129972671041 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -8595.7822 -8595.7822 -8672.56 -8672.56 297.1383 297.1383 22892.562 22892.562 -641.05488 -641.05488 14000 -8598.0104 -8598.0104 -8671.4126 -8671.4126 284.07414 284.07414 22900.588 22900.588 -1295.492 -1295.492 Loop time of 49.2389 on 1 procs for 1000 steps with 2000 atoms Performance: 1.755 ns/day, 13.677 hours/ns, 20.309 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.647 | 48.647 | 48.647 | 0.0 | 98.80 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13387 | 0.13387 | 0.13387 | 0.0 | 0.27 Output | 0.00015414 | 0.00015414 | 0.00015414 | 0.0 | 0.00 Modify | 0.39023 | 0.39023 | 0.39023 | 0.0 | 0.79 Other | | 0.06775 | | | 0.14 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 180054.0 ave 180054 max 180054 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 180054 Ave neighs/atom = 90.027000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.644416721328, Press = 7.60871016311933 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -8598.0104 -8598.0104 -8671.4126 -8671.4126 284.07414 284.07414 22900.588 22900.588 -1295.492 -1295.492 15000 -8597.3095 -8597.3095 -8671.0877 -8671.0877 285.52923 285.52923 22908.928 22908.928 -1741.9446 -1741.9446 Loop time of 49.4268 on 1 procs for 1000 steps with 2000 atoms Performance: 1.748 ns/day, 13.730 hours/ns, 20.232 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.828 | 48.828 | 48.828 | 0.0 | 98.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13371 | 0.13371 | 0.13371 | 0.0 | 0.27 Output | 0.00019805 | 0.00019805 | 0.00019805 | 0.0 | 0.00 Modify | 0.39563 | 0.39563 | 0.39563 | 0.0 | 0.80 Other | | 0.06886 | | | 0.14 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 180012.0 ave 180012 max 180012 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 180012 Ave neighs/atom = 90.006000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.614853838109, Press = 2.97539210264726 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -8597.3095 -8597.3095 -8671.0877 -8671.0877 285.52923 285.52923 22908.928 22908.928 -1741.9446 -1741.9446 16000 -8593.8207 -8593.8207 -8671.0355 -8671.0355 298.82954 298.82954 22918.589 22918.589 -2207.9016 -2207.9016 Loop time of 48.5184 on 1 procs for 1000 steps with 2000 atoms Performance: 1.781 ns/day, 13.477 hours/ns, 20.611 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.93 | 47.93 | 47.93 | 0.0 | 98.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13253 | 0.13253 | 0.13253 | 0.0 | 0.27 Output | 0.00021386 | 0.00021386 | 0.00021386 | 0.0 | 0.00 Modify | 0.38799 | 0.38799 | 0.38799 | 0.0 | 0.80 Other | | 0.06759 | | | 0.14 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 179999.0 ave 179999 max 179999 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 179999 Ave neighs/atom = 89.999500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.929221478892, Press = -1.94683235666568 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -8593.8207 -8593.8207 -8671.0355 -8671.0355 298.82954 298.82954 22918.589 22918.589 -2207.9016 -2207.9016 17000 -8594.0128 -8594.0128 -8671.7388 -8671.7388 300.80799 300.80799 22896.888 22896.888 -751.65194 -751.65194 Loop time of 48.4816 on 1 procs for 1000 steps with 2000 atoms Performance: 1.782 ns/day, 13.467 hours/ns, 20.626 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.896 | 47.896 | 47.896 | 0.0 | 98.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13083 | 0.13083 | 0.13083 | 0.0 | 0.27 Output | 0.00015009 | 0.00015009 | 0.00015009 | 0.0 | 0.00 Modify | 0.38715 | 0.38715 | 0.38715 | 0.0 | 0.80 Other | | 0.06775 | | | 0.14 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 179988.0 ave 179988 max 179988 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 179988 Ave neighs/atom = 89.994000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.938443405009, Press = -3.66868183563069 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -8594.0128 -8594.0128 -8671.7388 -8671.7388 300.80799 300.80799 22896.888 22896.888 -751.65194 -751.65194 18000 -8601.5442 -8601.5442 -8675.3224 -8675.3224 285.52949 285.52949 22845.59 22845.59 2411.9072 2411.9072 Loop time of 50.3568 on 1 procs for 1000 steps with 2000 atoms Performance: 1.716 ns/day, 13.988 hours/ns, 19.858 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 49.746 | 49.746 | 49.746 | 0.0 | 98.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13637 | 0.13637 | 0.13637 | 0.0 | 0.27 Output | 0.00023204 | 0.00023204 | 0.00023204 | 0.0 | 0.00 Modify | 0.40519 | 0.40519 | 0.40519 | 0.0 | 0.80 Other | | 0.06857 | | | 0.14 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 180035.0 ave 180035 max 180035 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 180035 Ave neighs/atom = 90.017500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.815820278802, Press = -4.19813166942704 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -8601.5442 -8601.5442 -8675.3224 -8675.3224 285.52949 285.52949 22845.59 22845.59 2411.9072 2411.9072 19000 -8596.029 -8596.029 -8669.8688 -8669.8688 285.76783 285.76783 22845.006 22845.006 3526.2672 3526.2672 Loop time of 51.0057 on 1 procs for 1000 steps with 2000 atoms Performance: 1.694 ns/day, 14.168 hours/ns, 19.606 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 50.384 | 50.384 | 50.384 | 0.0 | 98.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1384 | 0.1384 | 0.1384 | 0.0 | 0.27 Output | 0.00015038 | 0.00015038 | 0.00015038 | 0.0 | 0.00 Modify | 0.41247 | 0.41247 | 0.41247 | 0.0 | 0.81 Other | | 0.07082 | | | 0.14 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 180130.0 ave 180130 max 180130 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 180130 Ave neighs/atom = 90.065000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.645973832414, Press = 2.26126446162783 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -8596.029 -8596.029 -8669.8688 -8669.8688 285.76783 285.76783 22845.006 22845.006 3526.2672 3526.2672 20000 -8599.3989 -8599.3989 -8674.8931 -8674.8931 292.17056 292.17056 22861.084 22861.084 1471.0117 1471.0117 Loop time of 50.0776 on 1 procs for 1000 steps with 2000 atoms Performance: 1.725 ns/day, 13.910 hours/ns, 19.969 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 49.47 | 49.47 | 49.47 | 0.0 | 98.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13466 | 0.13466 | 0.13466 | 0.0 | 0.27 Output | 0.00018798 | 0.00018798 | 0.00018798 | 0.0 | 0.00 Modify | 0.40261 | 0.40261 | 0.40261 | 0.0 | 0.80 Other | | 0.06989 | | | 0.14 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 180164.0 ave 180164 max 180164 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 180164 Ave neighs/atom = 90.082000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.541965437129, Press = 3.87086552223046 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -8599.3989 -8599.3989 -8674.8931 -8674.8931 292.17056 292.17056 22861.084 22861.084 1471.0117 1471.0117 21000 -8595.7997 -8595.7997 -8673.1277 -8673.1277 299.2676 299.2676 22883.567 22883.567 -28.280567 -28.280567 Loop time of 49.981 on 1 procs for 1000 steps with 2000 atoms Performance: 1.729 ns/day, 13.884 hours/ns, 20.008 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 49.377 | 49.377 | 49.377 | 0.0 | 98.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13546 | 0.13546 | 0.13546 | 0.0 | 0.27 Output | 0.00014429 | 0.00014429 | 0.00014429 | 0.0 | 0.00 Modify | 0.39939 | 0.39939 | 0.39939 | 0.0 | 0.80 Other | | 0.06914 | | | 0.14 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 180062.0 ave 180062 max 180062 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 180062 Ave neighs/atom = 90.031000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.441159663701, Press = 3.62176800968849 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -8595.7997 -8595.7997 -8673.1277 -8673.1277 299.2676 299.2676 22883.567 22883.567 -28.280567 -28.280567 22000 -8598.0319 -8598.0319 -8675.1975 -8675.1975 298.63897 298.63897 22892.592 22892.592 -1165.258 -1165.258 Loop time of 46.9616 on 1 procs for 1000 steps with 2000 atoms Performance: 1.840 ns/day, 13.045 hours/ns, 21.294 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.391 | 46.391 | 46.391 | 0.0 | 98.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1288 | 0.1288 | 0.1288 | 0.0 | 0.27 Output | 0.00014981 | 0.00014981 | 0.00014981 | 0.0 | 0.00 Modify | 0.37526 | 0.37526 | 0.37526 | 0.0 | 0.80 Other | | 0.06642 | | | 0.14 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 180035.0 ave 180035 max 180035 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 180035 Ave neighs/atom = 90.017500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.24329287501, Press = 3.1418730549846 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 6.445 | 6.445 | 6.445 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -8598.0319 -8598.0319 -8675.1975 -8675.1975 298.63897 298.63897 22892.592 22892.592 -1165.258 -1165.258 23000 -8597.4859 -8597.4859 -8672.4061 -8672.4061 289.94878 289.94878 22917.057 22917.057 -2548.7663 -2548.7663 Loop time of 46.6275 on 1 procs for 1000 steps with 2000 atoms Performance: 1.853 ns/day, 12.952 hours/ns, 21.447 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.065 | 46.065 | 46.065 | 0.0 | 98.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12683 | 0.12683 | 0.12683 | 0.0 | 0.27 Output | 0.00014979 | 0.00014979 | 0.00014979 | 0.0 | 0.00 Modify | 0.37026 | 0.37026 | 0.37026 | 0.0 | 0.79 Other | | 0.0655 | | | 0.14 Nlocal: 2000.00 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5471.00 ave 5471 max 5471 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 180043.0 ave 180043 max 180043 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 180043 Ave neighs/atom = 90.021500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 22883.8040161568 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0