LAMMPS (8 Apr 2021) OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94) using 1 OpenMP thread(s) per MPI task Created triclinic box = (0.0000000 0.0000000 0.0000000) to (10.782400 9.2267700 10.450900) with tilt (-5.4140800 -0.017375600 0.10692700) WARNING: Triclinic box skew is large (src/domain.cpp:218) 1 by 1 by 1 MPI processor grid Scanning dump file ... Reading snapshot from dump file ... triclinic box = (0.0000000 0.0000000 0.0000000) to (10.782400 9.2267700 10.450900) with tilt (-5.4140800 -0.017375600 0.10692700) 0 atoms before read 64 atoms in snapshot 0 atoms purged 0 atoms replaced 0 atoms trimmed 64 atoms added 64 atoms after read 64 atoms in group all Changing box ... WARNING: Triclinic box skew is large (src/domain.cpp:218) triclinic box = (0.0000000 0.0000000 0.0000000) to (10.782400 9.2267700 10.450900) with tilt (-5.4140800 -0.017375600 0.10692700) WARNING: Triclinic box skew is large (src/domain.cpp:218) triclinic box = (0.0000000 0.0000000 0.0000000) to (10.782400 9.2267700 10.450900) with tilt (-5.4140800 -0.017375600 0.10692700) WARNING: Triclinic box skew is large (src/domain.cpp:218) triclinic box = (0.0000000 0.0000000 0.0000000) to (10.782400 9.2267700 10.450900) with tilt (-5.4140800 -0.017375600 0.10692700) WARNING: Triclinic box skew is large (src/domain.cpp:218) triclinic box = (0.0000000 0.0000000 0.0000000) to (10.782400 9.2267700 10.450900) with tilt (-5.4140800 -0.017375600 0.10692700) WARNING: Triclinic box skew is large (src/domain.cpp:218) triclinic box = (0.0000000 0.0000000 0.0000000) to (10.782400 9.2267700 10.450900) with tilt (-5.4140800 -0.017375600 0.10692700) WARNING: Triclinic box skew is large (src/domain.cpp:218) triclinic box = (0.0000000 0.0000000 0.0000000) to (10.782400 9.2267700 10.450900) with tilt (-5.4140800 -0.017375600 0.10692700) CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 - OpenKIM potential: https://openkim.org/cite/MO_405512056662_006#item-citation The log file lists these citations in BibTeX format. CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 4000, page size: 100000 master list distance cutoff = 5.77118 ghost atom cutoff = 5.77118 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5.77118 pair build: full/nsq stencil: none bin: none Setting up Verlet run ... Unit style : metal Current step : 0 Time step : 0.001 Per MPI rank memory allocation (min/avg/max) = 5.074 | 5.074 | 5.074 Mbytes v_pe_metal -199.55708 Loop time of 3.7e-06 on 1 procs for 0 steps with 64 atoms 108.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 0 | 0 | 0 | 0.0 | 0.00 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0 | 0 | 0 | 0.0 | 0.00 Output | 0 | 0 | 0 | 0.0 | 0.00 Modify | 0 | 0 | 0 | 0.0 | 0.00 Other | | 3.7e-06 | | |100.00 Nlocal: 64.0000 ave 64 max 64 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 665.000 ave 665 max 665 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3338.00 ave 3338 max 3338 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3338 Ave neighs/atom = 52.156250 Neighbor list builds = 0 Dangerous builds = 0 Total wall time: 0:00:00