AttributeError: module 'posixpath' has no attribute 'exits' Traceback (most recent call last): File "/usr/local/bin/run_openkim_job.py", line 552, in execute_in_place(runner, runner_driver, subject, subject_driver, env) File "/usr/local/bin/run_openkim_job.py", line 396, in execute_in_place if os.path.exits(KIM_TOOLS_LOG_FILE): AttributeError: module 'posixpath' has no attribute 'exits' output/pipeline.stdout: ----------------------- ============================================================================================================================================================ Finished with optimization============================================================================================================================================================ Final lattice Constants: a = [2.88805213] Angstroms, c = [4.71616938] Angstroms, c/a = 1.632993 Total energy: -15.715779800353479 eV Cohesive energy: -3.9289449500883697 eV/atom============================================================================================================================================================ output/pipeline.stderr: ----------------------- /anvil/scratch/x-bwaters/jobs/jobs/df9de730-544a-4946-8358-bdd31562f399-007/TE_582408679046_005-and-MO_684444719999_001-1752094399/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Au__TE_582408679046_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:181: FutureWarning: Please use atoms.calc = calc atoms.set_calculator(calc)/anvil/scratch/x-bwaters/jobs/jobs/df9de730-544a-4946-8358-bdd31562f399-007/TE_582408679046_005-and-MO_684444719999_001-1752094399/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Au__TE_582408679046_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:334: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) for init_guess_c in np.arange(/anvil/scratch/x-bwaters/jobs/jobs/df9de730-544a-4946-8358-bdd31562f399-007/TE_582408679046_005-and-MO_684444719999_001-1752094399/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Au__TE_582408679046_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:134: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) return math.sqrt(hrDist * hrDist + vDist * vDist)/anvil/scratch/x-bwaters/jobs/jobs/df9de730-544a-4946-8358-bdd31562f399-007/TE_582408679046_005-and-MO_684444719999_001-1752094399/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Au__TE_582408679046_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:420: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) float(minLatticeConstants[1] / minLatticeConstants[0]),/anvil/scratch/x-bwaters/jobs/jobs/df9de730-544a-4946-8358-bdd31562f399-007/TE_582408679046_005-and-MO_684444719999_001-1752094399/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Au__TE_582408679046_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:429: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) float(minLatticeConstants[0]),/anvil/scratch/x-bwaters/jobs/jobs/df9de730-544a-4946-8358-bdd31562f399-007/TE_582408679046_005-and-MO_684444719999_001-1752094399/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Au__TE_582408679046_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:430: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) float(minLatticeConstants[1]),{"realtime":6.12,"usertime":4.71,"systime":6.24,"memmax":97204,"memavg":0} output/kim.log: --------------- 2025-07-09:16:58:58EDT * 2 * information * 0x55ab5c124f60_0x55ab5bfce580 * KIM_LogImplementation.cpp:243 * Log object renamed. ID changed from '0x55ab5bfce580'.2025-07-09:16:58:58EDT * 3 * information * 0x55ab5c124f60_0x55ab5bfce580 * EAM_Implementation.cpp:1562 * Register argument supportStatus2025-07-09:16:58:58EDT * 4 * information * 0x55ab5c124f60_0x55ab5bfce580 * EAM_Implementation.cpp:1581 * Register callback supportStatus2025-07-09:16:58:58EDT * 5 * information * 0x55ab5bd1bf40_0x55ab5bd1cfc0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:58:58EDT * 2 * information * 0x55ab5bd1bf40 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:58:58EDT * 5 * information * 0x55ab5bd1d120_0x55ab5bd1c940 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:58:58EDT * 2 * information * 0x55ab5bd1d120 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:58:58EDT * 5 * information * 0x55ab5bd36680_0x55ab5bd1d070 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:58:58EDT * 2 * information * 0x55ab5bd36680 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:58:58EDT * 5 * information * 0x55ab5bd38c00_0x55ab5bd1edd0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:58:58EDT * 2 * information * 0x55ab5bd38c00 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:58:58EDT * 5 * information * 0x55ab5bd3b8d0_0x55ab5bd37330 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:58:58EDT * 2 * information * 0x55ab5bd3b8d0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:58:58EDT * 5 * information * 0x55ab5bf50370_0x55ab5bd39e10 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:58:58EDT * 2 * information * 0x55ab5bf50370 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:58:58EDT * 5 * information * 0x55ab5c078c40_0x55ab5bf22f40 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:58:58EDT * 2 * information * 0x55ab5c078c40 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:58:58EDT * 2 * warning * 0x55ab5c124f60 * EAM_Implementation.hpp:475 * Particles has density value outside of embedding function interpolation domain, but as LAMMPS equivalence was requested, ignoring2025-07-09:16:59:01EDT * 0 * information * 0x55ab5c124f60_0x55ab5bfce580 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:59:01EDT * 0 * information * 0x55ab5c124f60 * KIM_LogImplementation.cpp:119 * Log object destroyed. output/kim-tools.log: ---------------------