Traceback (most recent call last): File "/disk2/worker/repository/td/ElasticConstantsCubic__TD_011862047401_006/runner", line 248, in results = bulkmodulus.results() File "/disk2/worker/repository/td/ElasticConstantsCubic__TD_011862047401_006/runner", line 128, in results elastic_constants, info = hess(np.zeros(6, dtype=float)) File "/usr/local/lib/python3.6/dist-packages/numdifftools/core.py", line 833, in __call__ return super(Hessdiag, self).__call__(np.atleast_1d(x), *args, **kwds) File "/usr/local/lib/python3.6/dist-packages/numdifftools/core.py", line 317, in __call__ results = self._derivative(xi, args, kwds) File "/usr/local/lib/python3.6/dist-packages/numdifftools/core.py", line 202, in _derivative_nonzero_order results = [diff(f, fxi, xi, h) for h in steps] File "/usr/local/lib/python3.6/dist-packages/numdifftools/core.py", line 202, in results = [diff(f, fxi, xi, h) for h in steps] File "/usr/local/lib/python3.6/dist-packages/numdifftools/core.py", line 964, in _central_even + f(x - ee[i, :] - ee[j, :])) / (4. * hess[j, i]) File "/usr/local/lib/python3.6/dist-packages/numdifftools/core.py", line 266, in export_fun return fun(x, *args, **kwds) File "/disk2/worker/repository/td/ElasticConstantsCubic__TD_011862047401_006/runner", line 95, in energy_from_strain jac=self.get_gradient_from_positions, File "/usr/local/lib/python3.6/dist-packages/scipy/optimize/_minimize.py", line 612, in minimize return _minimize_bfgs(fun, x0, args, jac, callback, **options) File "/usr/local/lib/python3.6/dist-packages/scipy/optimize/optimize.py", line 1136, in _minimize_bfgs old_fval, old_old_fval, amin=1e-100, amax=1e100) File "/usr/local/lib/python3.6/dist-packages/scipy/optimize/optimize.py", line 936, in _line_search_wolfe12 **kwargs) File "/usr/local/lib/python3.6/dist-packages/scipy/optimize/linesearch.py", line 98, in line_search_wolfe1 c1=c1, c2=c2, amax=amax, amin=amin, xtol=xtol) File "/usr/local/lib/python3.6/dist-packages/scipy/optimize/linesearch.py", line 172, in scalar_search_wolfe1 phi1 = phi(stp) File "/usr/local/lib/python3.6/dist-packages/scipy/optimize/linesearch.py", line 84, in phi return f(xk + s*pk, *args) File "/usr/local/lib/python3.6/dist-packages/scipy/optimize/_differentiable_functions.py", line 182, in fun self._update_fun() File "/usr/local/lib/python3.6/dist-packages/scipy/optimize/_differentiable_functions.py", line 166, in _update_fun self._update_fun_impl() File "/usr/local/lib/python3.6/dist-packages/scipy/optimize/_differentiable_functions.py", line 73, in update_fun self.f = fun_wrapped(self.x) File "/usr/local/lib/python3.6/dist-packages/scipy/optimize/_differentiable_functions.py", line 70, in fun_wrapped return fun(x, *args) File "/disk2/worker/repository/td/ElasticConstantsCubic__TD_011862047401_006/runner", line 72, in get_energy_from_positions energy = self.slab.get_potential_energy() File "/usr/local/lib/python3.6/dist-packages/ase/atoms.py", line 734, in get_potential_energy energy = self._calc.get_potential_energy(self) File "/usr/local/lib/python3.6/dist-packages/ase/calculators/calculator.py", line 708, in get_potential_energy energy = self.get_property('energy', atoms) File "/usr/local/lib/python3.6/dist-packages/ase/calculators/calculator.py", line 736, in get_property self.calculate(atoms, [name], system_changes) File "/usr/local/lib/python3.6/dist-packages/ase/calculators/kim/kimmodel.py", line 287, in calculate self.update_neigh(atoms, self.species_map) File "/usr/local/lib/python3.6/dist-packages/ase/calculators/kim/neighborlist.py", line 428, in update self.build() File "/usr/local/lib/python3.6/dist-packages/ase/calculators/kim/kimpy_wrappers.py", line 49, in myfunc return check_call(func, *args) File "/usr/local/lib/python3.6/dist-packages/ase/calculators/kim/kimpy_wrappers.py", line 28, in check_call ret = f(*args) File "/usr/local/lib/python3.6/dist-packages/ase/calculators/kim/neighborlist.py", line 350, in build self.cutoffs, self.need_neigh MemoryError: std::bad_alloc Command exited with non-zero status 1 {"usertime":1.36,"memmax":78244,"memavg":0}