# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.324999988079071*${_u_distance} variable latticeconst_converted equal 3.324999988079071*1 lattice diamond ${latticeconst_converted} lattice diamond 3.32499998807907 Lattice spacing in x,y,z = 3.3250000 3.3250000 3.3250000 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (33.250000 33.250000 33.250000) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (33.250000 33.250000 33.250000) create_atoms CPU = 0.006 seconds variable mass_converted equal 12.0107*${_u_mass} variable mass_converted equal 12.0107*1 kim_interactions C WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions C #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_NouranianTschoppGwaltney_2014_CH__MO_354152387712_001 pair_coeff * * C #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 12.0107 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 36759.95272962 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 36759.95272962/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 36759.95272962/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 36759.95272962/(1*1*${_u_distance}) variable V0_metal equal 36759.95272962/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 36759.95272962*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 36759.95272962 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_354152387712_001#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.509 | 9.509 | 9.509 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -58636.218 -58636.218 -58960 -58960 313.15 313.15 36759.953 36759.953 9408.0488 9408.0488 1000 -58302.132 -58302.132 -58640.796 -58640.796 327.5433 327.5433 37428.596 37428.596 -3562.2764 -3562.2764 Loop time of 307.818 on 1 procs for 1000 steps with 8000 atoms Performance: 0.281 ns/day, 85.505 hours/ns, 3.249 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 305.8 | 305.8 | 305.8 | 0.0 | 99.34 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.32656 | 0.32656 | 0.32656 | 0.0 | 0.11 Output | 0.00038816 | 0.00038816 | 0.00038816 | 0.0 | 0.00 Modify | 1.5087 | 1.5087 | 1.5087 | 0.0 | 0.49 Other | | 0.1824 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 976000.0 ave 976000 max 976000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 976000 Ave neighs/atom = 122.00000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.750 | 9.750 | 9.750 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -58302.132 -58302.132 -58640.796 -58640.796 327.5433 327.5433 37428.596 37428.596 -3562.2764 -3562.2764 2000 -58330.522 -58330.522 -58646.592 -58646.592 305.69061 305.69061 37365.848 37365.848 1389.0992 1389.0992 Loop time of 307.78 on 1 procs for 1000 steps with 8000 atoms Performance: 0.281 ns/day, 85.495 hours/ns, 3.249 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 305.67 | 305.67 | 305.67 | 0.0 | 99.31 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.30331 | 0.30331 | 0.30331 | 0.0 | 0.10 Output | 0.00030991 | 0.00030991 | 0.00030991 | 0.0 | 0.00 Modify | 1.6185 | 1.6185 | 1.6185 | 0.0 | 0.53 Other | | 0.1876 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9344.00 ave 9344 max 9344 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 917988.0 ave 917988 max 917988 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 917988 Ave neighs/atom = 114.74850 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.751 | 9.751 | 9.751 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -58330.522 -58330.522 -58646.592 -58646.592 305.69061 305.69061 37365.848 37365.848 1389.0992 1389.0992 3000 -58323.412 -58323.412 -58645.797 -58645.797 311.79867 311.79867 37381.728 37381.728 -174.06029 -174.06029 Loop time of 290.426 on 1 procs for 1000 steps with 8000 atoms Performance: 0.297 ns/day, 80.674 hours/ns, 3.443 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 288.44 | 288.44 | 288.44 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2972 | 0.2972 | 0.2972 | 0.0 | 0.10 Output | 0.0002649 | 0.0002649 | 0.0002649 | 0.0 | 0.00 Modify | 1.5106 | 1.5106 | 1.5106 | 0.0 | 0.52 Other | | 0.1794 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9474.00 ave 9474 max 9474 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 919416.0 ave 919416 max 919416 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 919416 Ave neighs/atom = 114.92700 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.750 | 9.750 | 9.750 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -58323.412 -58323.412 -58645.797 -58645.797 311.79867 311.79867 37381.728 37381.728 -174.06029 -174.06029 4000 -58318.132 -58318.132 -58643.262 -58643.262 314.45376 314.45376 37376.738 37376.738 737.68046 737.68046 Loop time of 288.653 on 1 procs for 1000 steps with 8000 atoms Performance: 0.299 ns/day, 80.181 hours/ns, 3.464 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 286.71 | 286.71 | 286.71 | 0.0 | 99.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.28985 | 0.28985 | 0.28985 | 0.0 | 0.10 Output | 0.00030586 | 0.00030586 | 0.00030586 | 0.0 | 0.00 Modify | 1.4775 | 1.4775 | 1.4775 | 0.0 | 0.51 Other | | 0.1757 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9437.00 ave 9437 max 9437 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 919856.0 ave 919856 max 919856 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 919856 Ave neighs/atom = 114.98200 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.750 | 9.750 | 9.750 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -58318.132 -58318.132 -58643.262 -58643.262 314.45376 314.45376 37376.738 37376.738 737.68046 737.68046 5000 -58329.091 -58329.091 -58651.923 -58651.923 312.23083 312.23083 37358.06 37358.06 1270.4376 1270.4376 Loop time of 292.704 on 1 procs for 1000 steps with 8000 atoms Performance: 0.295 ns/day, 81.307 hours/ns, 3.416 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 290.79 | 290.79 | 290.79 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.28263 | 0.28263 | 0.28263 | 0.0 | 0.10 Output | 0.00022683 | 0.00022683 | 0.00022683 | 0.0 | 0.00 Modify | 1.4557 | 1.4557 | 1.4557 | 0.0 | 0.50 Other | | 0.1764 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9431.00 ave 9431 max 9431 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 919808.0 ave 919808 max 919808 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 919808 Ave neighs/atom = 114.97600 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 310.411104552719, Press = 660.480664792724 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.751 | 9.751 | 9.751 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -58329.091 -58329.091 -58651.923 -58651.923 312.23083 312.23083 37358.06 37358.06 1270.4376 1270.4376 6000 -58317.804 -58317.804 -58642.175 -58642.175 313.71933 313.71933 37396.075 37396.075 -741.04097 -741.04097 Loop time of 310.206 on 1 procs for 1000 steps with 8000 atoms Performance: 0.279 ns/day, 86.168 hours/ns, 3.224 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 308.11 | 308.11 | 308.11 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.29999 | 0.29999 | 0.29999 | 0.0 | 0.10 Output | 0.00023119 | 0.00023119 | 0.00023119 | 0.0 | 0.00 Modify | 1.6128 | 1.6128 | 1.6128 | 0.0 | 0.52 Other | | 0.1858 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9481.00 ave 9481 max 9481 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 920922.0 ave 920922 max 920922 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 920922 Ave neighs/atom = 115.11525 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.952164384944, Press = 11.1625277375334 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.750 | 9.750 | 9.750 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -58317.804 -58317.804 -58642.175 -58642.175 313.71933 313.71933 37396.075 37396.075 -741.04097 -741.04097 7000 -58326.469 -58326.469 -58645.681 -58645.681 308.72972 308.72972 37373.423 37373.423 629.25005 629.25005 Loop time of 315.352 on 1 procs for 1000 steps with 8000 atoms Performance: 0.274 ns/day, 87.598 hours/ns, 3.171 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 313.2 | 313.2 | 313.2 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.3024 | 0.3024 | 0.3024 | 0.0 | 0.10 Output | 0.00033509 | 0.00033509 | 0.00033509 | 0.0 | 0.00 Modify | 1.6587 | 1.6587 | 1.6587 | 0.0 | 0.53 Other | | 0.1892 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9387.00 ave 9387 max 9387 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 918872.0 ave 918872 max 918872 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 918872 Ave neighs/atom = 114.85900 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.912695416139, Press = 6.2125544828856 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.750 | 9.750 | 9.750 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -58326.469 -58326.469 -58645.681 -58645.681 308.72972 308.72972 37373.423 37373.423 629.25005 629.25005 8000 -58323.35 -58323.35 -58646.973 -58646.973 312.99681 312.99681 37404.116 37404.116 -2336.084 -2336.084 Loop time of 265.181 on 1 procs for 1000 steps with 8000 atoms Performance: 0.326 ns/day, 73.661 hours/ns, 3.771 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 263.45 | 263.45 | 263.45 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25668 | 0.25668 | 0.25668 | 0.0 | 0.10 Output | 0.00022786 | 0.00022786 | 0.00022786 | 0.0 | 0.00 Modify | 1.3121 | 1.3121 | 1.3121 | 0.0 | 0.49 Other | | 0.1639 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9378.00 ave 9378 max 9378 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 919542.0 ave 919542 max 919542 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 919542 Ave neighs/atom = 114.94275 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.133916448222, Press = 23.5599590805418 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.750 | 9.750 | 9.750 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -58323.35 -58323.35 -58646.973 -58646.973 312.99681 312.99681 37404.116 37404.116 -2336.084 -2336.084 9000 -58320.302 -58320.302 -58647.46 -58647.46 316.41445 316.41445 37354.936 37354.936 2471.3387 2471.3387 Loop time of 264.604 on 1 procs for 1000 steps with 8000 atoms Performance: 0.327 ns/day, 73.501 hours/ns, 3.779 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 262.88 | 262.88 | 262.88 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2549 | 0.2549 | 0.2549 | 0.0 | 0.10 Output | 0.00022557 | 0.00022557 | 0.00022557 | 0.0 | 0.00 Modify | 1.307 | 1.307 | 1.307 | 0.0 | 0.49 Other | | 0.1637 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9384.00 ave 9384 max 9384 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 918780.0 ave 918780 max 918780 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 918780 Ave neighs/atom = 114.84750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.012978144344, Press = -31.0568198545618 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.750 | 9.750 | 9.750 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -58320.302 -58320.302 -58647.46 -58647.46 316.41445 316.41445 37354.936 37354.936 2471.3387 2471.3387 10000 -58328.405 -58328.405 -58649.374 -58649.374 310.42896 310.42896 37375.808 37375.808 -158.28455 -158.28455 Loop time of 264.948 on 1 procs for 1000 steps with 8000 atoms Performance: 0.326 ns/day, 73.597 hours/ns, 3.774 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 263.22 | 263.22 | 263.22 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25709 | 0.25709 | 0.25709 | 0.0 | 0.10 Output | 0.00022772 | 0.00022772 | 0.00022772 | 0.0 | 0.00 Modify | 1.3056 | 1.3056 | 1.3056 | 0.0 | 0.49 Other | | 0.1625 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9435.00 ave 9435 max 9435 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 921040.0 ave 921040 max 921040 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 921040 Ave neighs/atom = 115.13000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.067625788613, Press = 25.1585867035934 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.750 | 9.750 | 9.750 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -58328.405 -58328.405 -58649.374 -58649.374 310.42896 310.42896 37375.808 37375.808 -158.28455 -158.28455 11000 -58320.514 -58320.514 -58644.799 -58644.799 313.63664 313.63664 37388.541 37388.541 -195.72819 -195.72819 Loop time of 264.793 on 1 procs for 1000 steps with 8000 atoms Performance: 0.326 ns/day, 73.553 hours/ns, 3.777 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 263.06 | 263.06 | 263.06 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25807 | 0.25807 | 0.25807 | 0.0 | 0.10 Output | 0.00027594 | 0.00027594 | 0.00027594 | 0.0 | 0.00 Modify | 1.3083 | 1.3083 | 1.3083 | 0.0 | 0.49 Other | | 0.1614 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9432.00 ave 9432 max 9432 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 920126.0 ave 920126 max 920126 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 920126 Ave neighs/atom = 115.01575 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.98455267368, Press = 4.08817130227337 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.750 | 9.750 | 9.750 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -58320.514 -58320.514 -58644.799 -58644.799 313.63664 313.63664 37388.541 37388.541 -195.72819 -195.72819 12000 -58319.103 -58319.103 -58646.505 -58646.505 316.651 316.651 37372.068 37372.068 668.80065 668.80065 Loop time of 264.613 on 1 procs for 1000 steps with 8000 atoms Performance: 0.327 ns/day, 73.504 hours/ns, 3.779 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 262.89 | 262.89 | 262.89 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25327 | 0.25327 | 0.25327 | 0.0 | 0.10 Output | 0.00023191 | 0.00023191 | 0.00023191 | 0.0 | 0.00 Modify | 1.3101 | 1.3101 | 1.3101 | 0.0 | 0.50 Other | | 0.1634 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9361.00 ave 9361 max 9361 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 918978.0 ave 918978 max 918978 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 918978 Ave neighs/atom = 114.87225 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.886597887903, Press = 10.0778445069568 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.750 | 9.750 | 9.750 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -58319.103 -58319.103 -58646.505 -58646.505 316.651 316.651 37372.068 37372.068 668.80065 668.80065 13000 -58325.081 -58325.081 -58647.843 -58647.843 312.16278 312.16278 37395.644 37395.644 -1470.7457 -1470.7457 Loop time of 264.842 on 1 procs for 1000 steps with 8000 atoms Performance: 0.326 ns/day, 73.567 hours/ns, 3.776 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 263.12 | 263.12 | 263.12 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2559 | 0.2559 | 0.2559 | 0.0 | 0.10 Output | 0.00022908 | 0.00022908 | 0.00022908 | 0.0 | 0.00 Modify | 1.3064 | 1.3064 | 1.3064 | 0.0 | 0.49 Other | | 0.162 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9386.00 ave 9386 max 9386 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 919942.0 ave 919942 max 919942 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 919942 Ave neighs/atom = 114.99275 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.053329543104, Press = -2.61125290373031 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.750 | 9.750 | 9.750 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -58325.081 -58325.081 -58647.843 -58647.843 312.16278 312.16278 37395.644 37395.644 -1470.7457 -1470.7457 14000 -58320.804 -58320.804 -58642.714 -58642.714 311.34007 311.34007 37341.712 37341.712 4048.0082 4048.0082 Loop time of 264.761 on 1 procs for 1000 steps with 8000 atoms Performance: 0.326 ns/day, 73.545 hours/ns, 3.777 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 263.04 | 263.04 | 263.04 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25349 | 0.25349 | 0.25349 | 0.0 | 0.10 Output | 0.0002832 | 0.0002832 | 0.0002832 | 0.0 | 0.00 Modify | 1.3086 | 1.3086 | 1.3086 | 0.0 | 0.49 Other | | 0.1627 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9396.00 ave 9396 max 9396 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 918976.0 ave 918976 max 918976 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 918976 Ave neighs/atom = 114.87200 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.201926985441, Press = 5.81694352159233 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.750 | 9.750 | 9.750 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -58320.804 -58320.804 -58642.714 -58642.714 311.34007 311.34007 37341.712 37341.712 4048.0082 4048.0082 15000 -58319.534 -58319.534 -58640.894 -58640.894 310.80791 310.80791 37417.533 37417.533 -3443.7263 -3443.7263 Loop time of 264.974 on 1 procs for 1000 steps with 8000 atoms Performance: 0.326 ns/day, 73.604 hours/ns, 3.774 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 263.25 | 263.25 | 263.25 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25558 | 0.25558 | 0.25558 | 0.0 | 0.10 Output | 0.00022942 | 0.00022942 | 0.00022942 | 0.0 | 0.00 Modify | 1.3063 | 1.3063 | 1.3063 | 0.0 | 0.49 Other | | 0.1631 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9457.00 ave 9457 max 9457 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 920594.0 ave 920594 max 920594 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 920594 Ave neighs/atom = 115.07425 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.184631285649, Press = 1.88147242960263 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.750 | 9.750 | 9.750 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -58319.534 -58319.534 -58640.894 -58640.894 310.80791 310.80791 37417.533 37417.533 -3443.7263 -3443.7263 16000 -58326.62 -58326.62 -58645.789 -58645.789 308.68821 308.68821 37353.033 37353.033 3141.6413 3141.6413 Loop time of 264.597 on 1 procs for 1000 steps with 8000 atoms Performance: 0.327 ns/day, 73.499 hours/ns, 3.779 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 262.87 | 262.87 | 262.87 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25357 | 0.25357 | 0.25357 | 0.0 | 0.10 Output | 0.00022681 | 0.00022681 | 0.00022681 | 0.0 | 0.00 Modify | 1.3071 | 1.3071 | 1.3071 | 0.0 | 0.49 Other | | 0.163 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9361.00 ave 9361 max 9361 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 918390.0 ave 918390 max 918390 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 918390 Ave neighs/atom = 114.79875 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.048725035668, Press = 1.42209781518138 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.750 | 9.750 | 9.750 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -58326.62 -58326.62 -58645.789 -58645.789 308.68821 308.68821 37353.033 37353.033 3141.6413 3141.6413 17000 -58325.495 -58325.495 -58648.137 -58648.137 312.04735 312.04735 37389.307 37389.307 -986.22381 -986.22381 Loop time of 265.022 on 1 procs for 1000 steps with 8000 atoms Performance: 0.326 ns/day, 73.617 hours/ns, 3.773 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 263.3 | 263.3 | 263.3 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2546 | 0.2546 | 0.2546 | 0.0 | 0.10 Output | 0.00022599 | 0.00022599 | 0.00022599 | 0.0 | 0.00 Modify | 1.3062 | 1.3062 | 1.3062 | 0.0 | 0.49 Other | | 0.1619 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9418.00 ave 9418 max 9418 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 920414.0 ave 920414 max 920414 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 920414 Ave neighs/atom = 115.05175 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.034541648275, Press = 3.78567062832566 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.750 | 9.750 | 9.750 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -58325.495 -58325.495 -58648.137 -58648.137 312.04735 312.04735 37389.307 37389.307 -986.22381 -986.22381 18000 -58321.157 -58321.157 -58643.502 -58643.502 311.75965 311.75965 37370.6 37370.6 1064.2836 1064.2836 Loop time of 264.847 on 1 procs for 1000 steps with 8000 atoms Performance: 0.326 ns/day, 73.569 hours/ns, 3.776 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 263.12 | 263.12 | 263.12 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25541 | 0.25541 | 0.25541 | 0.0 | 0.10 Output | 0.00029317 | 0.00029317 | 0.00029317 | 0.0 | 0.00 Modify | 1.3116 | 1.3116 | 1.3116 | 0.0 | 0.50 Other | | 0.1632 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9338.00 ave 9338 max 9338 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 919456.0 ave 919456 max 919456 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 919456 Ave neighs/atom = 114.93200 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.906754217336, Press = -2.78729807144797 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.750 | 9.750 | 9.750 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -58321.157 -58321.157 -58643.502 -58643.502 311.75965 311.75965 37370.6 37370.6 1064.2836 1064.2836 19000 -58324.803 -58324.803 -58648.56 -58648.56 313.12632 313.12632 37376.253 37376.253 -26.163907 -26.163907 Loop time of 265.496 on 1 procs for 1000 steps with 8000 atoms Performance: 0.325 ns/day, 73.749 hours/ns, 3.767 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 263.76 | 263.76 | 263.76 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25666 | 0.25666 | 0.25666 | 0.0 | 0.10 Output | 0.0002268 | 0.0002268 | 0.0002268 | 0.0 | 0.00 Modify | 1.3174 | 1.3174 | 1.3174 | 0.0 | 0.50 Other | | 0.1642 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9446.00 ave 9446 max 9446 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 920088.0 ave 920088 max 920088 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 920088 Ave neighs/atom = 115.01100 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.951622308944, Press = 10.0515316818084 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.750 | 9.750 | 9.750 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -58324.803 -58324.803 -58648.56 -58648.56 313.12632 313.12632 37376.253 37376.253 -26.163907 -26.163907 20000 -58320.924 -58320.924 -58651.158 -58651.158 319.38952 319.38952 37404.296 37404.296 -2591.8628 -2591.8628 Loop time of 265.383 on 1 procs for 1000 steps with 8000 atoms Performance: 0.326 ns/day, 73.717 hours/ns, 3.768 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 263.64 | 263.64 | 263.64 | 0.0 | 99.34 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25658 | 0.25658 | 0.25658 | 0.0 | 0.10 Output | 0.00022794 | 0.00022794 | 0.00022794 | 0.0 | 0.00 Modify | 1.3177 | 1.3177 | 1.3177 | 0.0 | 0.50 Other | | 0.1646 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9391.00 ave 9391 max 9391 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 920388.0 ave 920388 max 920388 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 920388 Ave neighs/atom = 115.04850 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.062735141696, Press = -8.62677705489711 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.750 | 9.750 | 9.750 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -58320.924 -58320.924 -58651.158 -58651.158 319.38952 319.38952 37404.296 37404.296 -2591.8628 -2591.8628 21000 -58322.604 -58322.604 -58645.565 -58645.565 312.35593 312.35593 37366.089 37366.089 1369.2016 1369.2016 Loop time of 265.315 on 1 procs for 1000 steps with 8000 atoms Performance: 0.326 ns/day, 73.699 hours/ns, 3.769 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 263.58 | 263.58 | 263.58 | 0.0 | 99.34 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25641 | 0.25641 | 0.25641 | 0.0 | 0.10 Output | 0.00022726 | 0.00022726 | 0.00022726 | 0.0 | 0.00 Modify | 1.3167 | 1.3167 | 1.3167 | 0.0 | 0.50 Other | | 0.1652 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9382.00 ave 9382 max 9382 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 919350.0 ave 919350 max 919350 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 919350 Ave neighs/atom = 114.91875 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.122207713749, Press = 5.84833083384163 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.750 | 9.750 | 9.750 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -58322.604 -58322.604 -58645.565 -58645.565 312.35593 312.35593 37366.089 37366.089 1369.2016 1369.2016 22000 -58328.162 -58328.162 -58650.146 -58650.146 311.41069 311.41069 37379.02 37379.02 -265.96302 -265.96302 Loop time of 265.554 on 1 procs for 1000 steps with 8000 atoms Performance: 0.325 ns/day, 73.765 hours/ns, 3.766 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 263.81 | 263.81 | 263.81 | 0.0 | 99.34 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2575 | 0.2575 | 0.2575 | 0.0 | 0.10 Output | 0.00022798 | 0.00022798 | 0.00022798 | 0.0 | 0.00 Modify | 1.3193 | 1.3193 | 1.3193 | 0.0 | 0.50 Other | | 0.1642 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9412.00 ave 9412 max 9412 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 919974.0 ave 919974 max 919974 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 919974 Ave neighs/atom = 114.99675 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.16981212203, Press = 2.19066675002274 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 9.750 | 9.750 | 9.750 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -58328.162 -58328.162 -58650.146 -58650.146 311.41069 311.41069 37379.02 37379.02 -265.96302 -265.96302 23000 -58323.345 -58323.345 -58649.472 -58649.472 315.41813 315.41813 37364.704 37364.704 1395.639 1395.639 Loop time of 265.224 on 1 procs for 1000 steps with 8000 atoms Performance: 0.326 ns/day, 73.673 hours/ns, 3.770 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 263.48 | 263.48 | 263.48 | 0.0 | 99.34 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25971 | 0.25971 | 0.25971 | 0.0 | 0.10 Output | 0.00029169 | 0.00029169 | 0.00029169 | 0.0 | 0.00 Modify | 1.3177 | 1.3177 | 1.3177 | 0.0 | 0.50 Other | | 0.164 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 9424.00 ave 9424 max 9424 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 919608.0 ave 919608 max 919608 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 919608 Ave neighs/atom = 114.95100 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 37378.6297540032 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0