# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.5564776659011836*${_u_distance} variable latticeconst_converted equal 3.5564776659011836*1 lattice diamond ${latticeconst_converted} lattice diamond 3.55647766590118 Lattice spacing in x,y,z = 3.5564777 3.5564777 3.5564777 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (35.564777 35.564777 35.564777) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (35.564777 35.564777 35.564777) create_atoms CPU = 0.003 seconds variable mass_converted equal 12.0107*${_u_mass} variable mass_converted equal 12.0107*1 kim_interactions C WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions C #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_KangEunJun_2014_SiC__MO_477506997611_001 pair_coeff * * C #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 12.0107 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 44984.2265010191 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 44984.2265010191/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 44984.2265010191/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 44984.2265010191/(1*1*${_u_distance}) variable V0_metal equal 44984.2265010191/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 44984.2265010191*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 44984.2265010191 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_477506997611_001#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.65 | 10.65 | 10.65 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -58656.897 -58656.897 -58960 -58960 293.15 293.15 44984.227 44984.227 7196.9293 7196.9293 1000 -58326.843 -58326.843 -58646.027 -58646.027 308.70342 308.70342 45305.543 45305.543 1065.2404 1065.2404 Loop time of 400.541 on 1 procs for 1000 steps with 8000 atoms Performance: 0.216 ns/day, 111.261 hours/ns, 2.497 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 399.79 | 399.79 | 399.79 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.09217 | 0.09217 | 0.09217 | 0.0 | 0.02 Output | 0.0003488 | 0.0003488 | 0.0003488 | 0.0 | 0.00 Modify | 0.56396 | 0.56396 | 0.56396 | 0.0 | 0.14 Other | | 0.09225 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26400e+06 ave 1.264e+06 max 1.264e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1264000 Ave neighs/atom = 158.00000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -58326.843 -58326.843 -58646.027 -58646.027 308.70342 308.70342 45305.543 45305.543 1065.2404 1065.2404 2000 -58358.632 -58358.632 -58659.465 -58659.465 290.95462 290.95462 45318.363 45318.363 -1730.2779 -1730.2779 Loop time of 396.63 on 1 procs for 1000 steps with 8000 atoms Performance: 0.218 ns/day, 110.175 hours/ns, 2.521 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 395.9 | 395.9 | 395.9 | 0.0 | 99.82 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.090529 | 0.090529 | 0.090529 | 0.0 | 0.02 Output | 0.00016906 | 0.00016906 | 0.00016906 | 0.0 | 0.00 Modify | 0.55601 | 0.55601 | 0.55601 | 0.0 | 0.14 Other | | 0.08657 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26384e+06 ave 1.26384e+06 max 1.26384e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263844 Ave neighs/atom = 157.98050 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -58358.632 -58358.632 -58659.465 -58659.465 290.95462 290.95462 45318.363 45318.363 -1730.2779 -1730.2779 3000 -58344.487 -58344.487 -58656.884 -58656.884 302.13918 302.13918 45311.502 45311.502 32.926215 32.926215 Loop time of 396.135 on 1 procs for 1000 steps with 8000 atoms Performance: 0.218 ns/day, 110.038 hours/ns, 2.524 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 395.4 | 395.4 | 395.4 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.090727 | 0.090727 | 0.090727 | 0.0 | 0.02 Output | 0.00016951 | 0.00016951 | 0.00016951 | 0.0 | 0.00 Modify | 0.55596 | 0.55596 | 0.55596 | 0.0 | 0.14 Other | | 0.08647 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26383e+06 ave 1.26383e+06 max 1.26383e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263832 Ave neighs/atom = 157.97900 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -58344.487 -58344.487 -58656.884 -58656.884 302.13918 302.13918 45311.502 45311.502 32.926215 32.926215 4000 -58348.668 -58348.668 -58650.916 -58650.916 292.3233 292.3233 45300.511 45300.511 296.86532 296.86532 Loop time of 396.732 on 1 procs for 1000 steps with 8000 atoms Performance: 0.218 ns/day, 110.203 hours/ns, 2.521 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 396 | 396 | 396 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.091326 | 0.091326 | 0.091326 | 0.0 | 0.02 Output | 0.00016509 | 0.00016509 | 0.00016509 | 0.0 | 0.00 Modify | 0.55623 | 0.55623 | 0.55623 | 0.0 | 0.14 Other | | 0.08631 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26388e+06 ave 1.26388e+06 max 1.26388e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263878 Ave neighs/atom = 157.98475 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -58348.668 -58348.668 -58650.916 -58650.916 292.3233 292.3233 45300.511 45300.511 296.86532 296.86532 5000 -58352.087 -58352.087 -58655.286 -58655.286 293.24277 293.24277 45296.26 45296.26 828.56354 828.56354 Loop time of 397.083 on 1 procs for 1000 steps with 8000 atoms Performance: 0.218 ns/day, 110.301 hours/ns, 2.518 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 396.35 | 396.35 | 396.35 | 0.0 | 99.82 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.090696 | 0.090696 | 0.090696 | 0.0 | 0.02 Output | 0.0001309 | 0.0001309 | 0.0001309 | 0.0 | 0.00 Modify | 0.55651 | 0.55651 | 0.55651 | 0.0 | 0.14 Other | | 0.08668 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26381e+06 ave 1.26381e+06 max 1.26381e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263812 Ave neighs/atom = 157.97650 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.854040540453, Press = -23.4028242130875 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -58352.087 -58352.087 -58655.286 -58655.286 293.24277 293.24277 45296.26 45296.26 828.56354 828.56354 6000 -58343.613 -58343.613 -58653.836 -58653.836 300.03606 300.03606 45303.734 45303.734 229.20906 229.20906 Loop time of 397.207 on 1 procs for 1000 steps with 8000 atoms Performance: 0.218 ns/day, 110.335 hours/ns, 2.518 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 396.46 | 396.46 | 396.46 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.091196 | 0.091196 | 0.091196 | 0.0 | 0.02 Output | 0.00013591 | 0.00013591 | 0.00013591 | 0.0 | 0.00 Modify | 0.57 | 0.57 | 0.57 | 0.0 | 0.14 Other | | 0.08669 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26388e+06 ave 1.26388e+06 max 1.26388e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263880 Ave neighs/atom = 157.98500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.767663190063, Press = -42.3897860965058 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -58343.613 -58343.613 -58653.836 -58653.836 300.03606 300.03606 45303.734 45303.734 229.20906 229.20906 7000 -58354.156 -58354.156 -58655.859 -58655.859 291.79557 291.79557 45334.233 45334.233 -3232.8319 -3232.8319 Loop time of 401.523 on 1 procs for 1000 steps with 8000 atoms Performance: 0.215 ns/day, 111.534 hours/ns, 2.491 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 400.76 | 400.76 | 400.76 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.091854 | 0.091854 | 0.091854 | 0.0 | 0.02 Output | 0.00013272 | 0.00013272 | 0.00013272 | 0.0 | 0.00 Modify | 0.57997 | 0.57997 | 0.57997 | 0.0 | 0.14 Other | | 0.08951 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26382e+06 ave 1.26382e+06 max 1.26382e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263822 Ave neighs/atom = 157.97775 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.023111645473, Press = -14.2069897932991 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -58354.156 -58354.156 -58655.859 -58655.859 291.79557 291.79557 45334.233 45334.233 -3232.8319 -3232.8319 8000 -58344.179 -58344.179 -58647.864 -58647.864 293.71288 293.71288 45323.641 45323.641 -1409.1368 -1409.1368 Loop time of 396.49 on 1 procs for 1000 steps with 8000 atoms Performance: 0.218 ns/day, 110.136 hours/ns, 2.522 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 395.74 | 395.74 | 395.74 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.091212 | 0.091212 | 0.091212 | 0.0 | 0.02 Output | 0.00014126 | 0.00014126 | 0.00014126 | 0.0 | 0.00 Modify | 0.56958 | 0.56958 | 0.56958 | 0.0 | 0.14 Other | | 0.08679 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26380e+06 ave 1.2638e+06 max 1.2638e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263796 Ave neighs/atom = 157.97450 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.102484100055, Press = 29.5828885767784 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -58344.179 -58344.179 -58647.864 -58647.864 293.71288 293.71288 45323.641 45323.641 -1409.1368 -1409.1368 9000 -58351.39 -58351.39 -58652.364 -58652.364 291.09076 291.09076 45275.947 45275.947 2517.5986 2517.5986 Loop time of 412.139 on 1 procs for 1000 steps with 8000 atoms Performance: 0.210 ns/day, 114.483 hours/ns, 2.426 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 411.36 | 411.36 | 411.36 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.092758 | 0.092758 | 0.092758 | 0.0 | 0.02 Output | 0.00013363 | 0.00013363 | 0.00013363 | 0.0 | 0.00 Modify | 0.5981 | 0.5981 | 0.5981 | 0.0 | 0.15 Other | | 0.0888 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26381e+06 ave 1.26381e+06 max 1.26381e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263810 Ave neighs/atom = 157.97625 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.030063760107, Press = 10.2746036162512 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -58351.39 -58351.39 -58652.364 -58652.364 291.09076 291.09076 45275.947 45275.947 2517.5986 2517.5986 10000 -58349.743 -58349.743 -58651.412 -58651.412 291.76323 291.76323 45287.792 45287.792 1753.6124 1753.6124 Loop time of 429.772 on 1 procs for 1000 steps with 8000 atoms Performance: 0.201 ns/day, 119.381 hours/ns, 2.327 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 428.96 | 428.96 | 428.96 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.094375 | 0.094375 | 0.094375 | 0.0 | 0.02 Output | 0.00015379 | 0.00015379 | 0.00015379 | 0.0 | 0.00 Modify | 0.62509 | 0.62509 | 0.62509 | 0.0 | 0.15 Other | | 0.09059 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26387e+06 ave 1.26387e+06 max 1.26387e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263870 Ave neighs/atom = 157.98375 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.132987157788, Press = -6.3294166761349 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -58349.743 -58349.743 -58651.412 -58651.412 291.76323 291.76323 45287.792 45287.792 1753.6124 1753.6124 11000 -58342.09 -58342.09 -58644.568 -58644.568 292.54525 292.54525 45315.997 45315.997 -444.22441 -444.22441 Loop time of 401.674 on 1 procs for 1000 steps with 8000 atoms Performance: 0.215 ns/day, 111.576 hours/ns, 2.490 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 400.92 | 400.92 | 400.92 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.091467 | 0.091467 | 0.091467 | 0.0 | 0.02 Output | 0.00013068 | 0.00013068 | 0.00013068 | 0.0 | 0.00 Modify | 0.57639 | 0.57639 | 0.57639 | 0.0 | 0.14 Other | | 0.08698 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26382e+06 ave 1.26382e+06 max 1.26382e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263822 Ave neighs/atom = 157.97775 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.176162579335, Press = -7.25125431788011 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -58342.09 -58342.09 -58644.568 -58644.568 292.54525 292.54525 45315.997 45315.997 -444.22441 -444.22441 12000 -58350.239 -58350.239 -58655.636 -58655.636 295.36937 295.36937 45329.749 45329.749 -2634.3093 -2634.3093 Loop time of 395.195 on 1 procs for 1000 steps with 8000 atoms Performance: 0.219 ns/day, 109.776 hours/ns, 2.530 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 394.45 | 394.45 | 394.45 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.09109 | 0.09109 | 0.09109 | 0.0 | 0.02 Output | 0.00012808 | 0.00012808 | 0.00012808 | 0.0 | 0.00 Modify | 0.56499 | 0.56499 | 0.56499 | 0.0 | 0.14 Other | | 0.08644 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26379e+06 ave 1.26379e+06 max 1.26379e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263788 Ave neighs/atom = 157.97350 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.32582727102, Press = 1.35112060692702 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -58350.239 -58350.239 -58655.636 -58655.636 295.36937 295.36937 45329.749 45329.749 -2634.3093 -2634.3093 13000 -58340.302 -58340.302 -58647.107 -58647.107 296.73067 296.73067 45302.708 45302.708 886.14952 886.14952 Loop time of 395.052 on 1 procs for 1000 steps with 8000 atoms Performance: 0.219 ns/day, 109.737 hours/ns, 2.531 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 394.31 | 394.31 | 394.31 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.091032 | 0.091032 | 0.091032 | 0.0 | 0.02 Output | 0.00013149 | 0.00013149 | 0.00013149 | 0.0 | 0.00 Modify | 0.56465 | 0.56465 | 0.56465 | 0.0 | 0.14 Other | | 0.08647 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26384e+06 ave 1.26384e+06 max 1.26384e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263836 Ave neighs/atom = 157.97950 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.450188350324, Press = 8.95110626414314 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -58340.302 -58340.302 -58647.107 -58647.107 296.73067 296.73067 45302.708 45302.708 886.14952 886.14952 14000 -58345.368 -58345.368 -58652.025 -58652.025 296.58784 296.58784 45239.568 45239.568 6426.1407 6426.1407 Loop time of 395.189 on 1 procs for 1000 steps with 8000 atoms Performance: 0.219 ns/day, 109.775 hours/ns, 2.530 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 394.45 | 394.45 | 394.45 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.090812 | 0.090812 | 0.090812 | 0.0 | 0.02 Output | 0.0001426 | 0.0001426 | 0.0001426 | 0.0 | 0.00 Modify | 0.56468 | 0.56468 | 0.56468 | 0.0 | 0.14 Other | | 0.08658 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26386e+06 ave 1.26386e+06 max 1.26386e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263856 Ave neighs/atom = 157.98200 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.438216864625, Press = 0.714765656091528 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -58345.368 -58345.368 -58652.025 -58652.025 296.58784 296.58784 45239.568 45239.568 6426.1407 6426.1407 15000 -58351.549 -58351.549 -58650.405 -58650.405 289.04302 289.04302 45298.374 45298.374 586.21966 586.21966 Loop time of 395.076 on 1 procs for 1000 steps with 8000 atoms Performance: 0.219 ns/day, 109.743 hours/ns, 2.531 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 394.33 | 394.33 | 394.33 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.090609 | 0.090609 | 0.090609 | 0.0 | 0.02 Output | 0.00013513 | 0.00013513 | 0.00013513 | 0.0 | 0.00 Modify | 0.56497 | 0.56497 | 0.56497 | 0.0 | 0.14 Other | | 0.08626 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26387e+06 ave 1.26387e+06 max 1.26387e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263870 Ave neighs/atom = 157.98375 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.389931146138, Press = -7.5543609219724 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -58351.549 -58351.549 -58650.405 -58650.405 289.04302 289.04302 45298.374 45298.374 586.21966 586.21966 16000 -58347.363 -58347.363 -58653.528 -58653.528 296.11089 296.11089 45318.328 45318.328 -1348.9541 -1348.9541 Loop time of 395.386 on 1 procs for 1000 steps with 8000 atoms Performance: 0.219 ns/day, 109.829 hours/ns, 2.529 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 394.64 | 394.64 | 394.64 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.091185 | 0.091185 | 0.091185 | 0.0 | 0.02 Output | 0.00013312 | 0.00013312 | 0.00013312 | 0.0 | 0.00 Modify | 0.56752 | 0.56752 | 0.56752 | 0.0 | 0.14 Other | | 0.08666 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26387e+06 ave 1.26387e+06 max 1.26387e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263870 Ave neighs/atom = 157.98375 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.29308427837, Press = -2.56771986848931 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -58347.363 -58347.363 -58653.528 -58653.528 296.11089 296.11089 45318.328 45318.328 -1348.9541 -1348.9541 17000 -58356.401 -58356.401 -58655.077 -58655.077 288.86857 288.86857 45317.01 45317.01 -1560.5697 -1560.5697 Loop time of 394.943 on 1 procs for 1000 steps with 8000 atoms Performance: 0.219 ns/day, 109.706 hours/ns, 2.532 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 394.2 | 394.2 | 394.2 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.091385 | 0.091385 | 0.091385 | 0.0 | 0.02 Output | 0.00013359 | 0.00013359 | 0.00013359 | 0.0 | 0.00 Modify | 0.56709 | 0.56709 | 0.56709 | 0.0 | 0.14 Other | | 0.08684 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26383e+06 ave 1.26383e+06 max 1.26383e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263832 Ave neighs/atom = 157.97900 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.183154057523, Press = 1.35383648049725 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -58356.401 -58356.401 -58655.077 -58655.077 288.86857 288.86857 45317.01 45317.01 -1560.5697 -1560.5697 18000 -58346.146 -58346.146 -58649.961 -58649.961 293.83887 293.83887 45301.648 45301.648 558.88747 558.88747 Loop time of 394.997 on 1 procs for 1000 steps with 8000 atoms Performance: 0.219 ns/day, 109.721 hours/ns, 2.532 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 394.25 | 394.25 | 394.25 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.091308 | 0.091308 | 0.091308 | 0.0 | 0.02 Output | 0.00013013 | 0.00013013 | 0.00013013 | 0.0 | 0.00 Modify | 0.56749 | 0.56749 | 0.56749 | 0.0 | 0.14 Other | | 0.08686 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26385e+06 ave 1.26385e+06 max 1.26385e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263846 Ave neighs/atom = 157.98075 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.158360368618, Press = 4.53936018409404 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -58346.146 -58346.146 -58649.961 -58649.961 293.83887 293.83887 45301.648 45301.648 558.88747 558.88747 19000 -58355.874 -58355.874 -58658.597 -58658.597 292.78275 292.78275 45249.397 45249.397 4770.4961 4770.4961 Loop time of 395.124 on 1 procs for 1000 steps with 8000 atoms Performance: 0.219 ns/day, 109.757 hours/ns, 2.531 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 394.38 | 394.38 | 394.38 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.09087 | 0.09087 | 0.09087 | 0.0 | 0.02 Output | 0.00013476 | 0.00013476 | 0.00013476 | 0.0 | 0.00 Modify | 0.56824 | 0.56824 | 0.56824 | 0.0 | 0.14 Other | | 0.08675 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26385e+06 ave 1.26385e+06 max 1.26385e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263852 Ave neighs/atom = 157.98150 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.079351882127, Press = 1.23604801539123 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -58355.874 -58355.874 -58658.597 -58658.597 292.78275 292.78275 45249.397 45249.397 4770.4961 4770.4961 20000 -58345.052 -58345.052 -58647.906 -58647.906 292.90899 292.90899 45296.22 45296.22 1305.7049 1305.7049 Loop time of 395.119 on 1 procs for 1000 steps with 8000 atoms Performance: 0.219 ns/day, 109.755 hours/ns, 2.531 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 394.37 | 394.37 | 394.37 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.09136 | 0.09136 | 0.09136 | 0.0 | 0.02 Output | 0.00013274 | 0.00013274 | 0.00013274 | 0.0 | 0.00 Modify | 0.56808 | 0.56808 | 0.56808 | 0.0 | 0.14 Other | | 0.08672 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26388e+06 ave 1.26388e+06 max 1.26388e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263878 Ave neighs/atom = 157.98475 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.069009557359, Press = -5.40600717783815 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -58345.052 -58345.052 -58647.906 -58647.906 292.90899 292.90899 45296.22 45296.22 1305.7049 1305.7049 21000 -58346.06 -58346.06 -58650.883 -58650.883 294.8135 294.8135 45315.978 45315.978 -1065.5832 -1065.5832 Loop time of 394.984 on 1 procs for 1000 steps with 8000 atoms Performance: 0.219 ns/day, 109.718 hours/ns, 2.532 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 394.24 | 394.24 | 394.24 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.091211 | 0.091211 | 0.091211 | 0.0 | 0.02 Output | 0.00013531 | 0.00013531 | 0.00013531 | 0.0 | 0.00 Modify | 0.5675 | 0.5675 | 0.5675 | 0.0 | 0.14 Other | | 0.08669 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26384e+06 ave 1.26384e+06 max 1.26384e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263842 Ave neighs/atom = 157.98025 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.040239242541, Press = -1.55176465225741 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 12 12 12 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.90 | 10.90 | 10.90 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -58346.06 -58346.06 -58650.883 -58650.883 294.8135 294.8135 45315.978 45315.978 -1065.5832 -1065.5832 22000 -58350.532 -58350.532 -58654.096 -58654.096 293.59528 293.59528 45329.478 45329.478 -2242.9777 -2242.9777 Loop time of 394.686 on 1 procs for 1000 steps with 8000 atoms Performance: 0.219 ns/day, 109.635 hours/ns, 2.534 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 393.94 | 393.94 | 393.94 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.091087 | 0.091087 | 0.091087 | 0.0 | 0.02 Output | 0.00013327 | 0.00013327 | 0.00013327 | 0.0 | 0.00 Modify | 0.56698 | 0.56698 | 0.56698 | 0.0 | 0.14 Other | | 0.08693 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 10629.0 ave 10629 max 10629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 1.26387e+06 ave 1.26387e+06 max 1.26387e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1263868 Ave neighs/atom = 157.98350 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 45305.9863576437 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0