# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.5577528923749933*${_u_distance} variable latticeconst_converted equal 3.5577528923749933*1 lattice diamond ${latticeconst_converted} lattice diamond 3.55775289237499 Lattice spacing in x,y,z = 3.5577529 3.5577529 3.5577529 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (35.577529 35.577529 35.577529) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms create_atoms CPU = 0.002 seconds variable mass_converted equal 12.0107*${_u_mass} variable mass_converted equal 12.0107*1 kim_interactions C #=== BEGIN kim_interactions ================================== pair_style kim Tersoff_LAMMPS_AlbeNordlundAverback_2002_PtC__MO_500121566391_003 pair_coeff * * C #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 12.0107 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 45032.6330876461 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 45032.6330876461/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 45032.6330876461/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 45032.6330876461/(1*1*${_u_distance}) variable V0_metal equal 45032.6330876461/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 45032.6330876461*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 45032.6330876461 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 273.15*${_u_temperature} variable temp_converted equal 273.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 273.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "273.15 - 0.2" variable T_up equal "273.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.71 | 12.71 | 12.71 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -58303.305 -58303.305 -58585.729 -58585.729 273.15 273.15 45032.633 45032.633 6698.673 6698.673 1000 -57995.955 -57995.955 -58274.589 -58274.589 269.48364 269.48364 45217.862 45217.862 -2570.8057 -2570.8057 Loop time of 65.4913 on 1 procs for 1000 steps with 8000 atoms Performance: 1.319 ns/day, 18.192 hours/ns, 15.269 timesteps/s 81.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 65.12 | 65.12 | 65.12 | 0.0 | 99.43 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.05734 | 0.05734 | 0.05734 | 0.0 | 0.09 Output | 5.33e-05 | 5.33e-05 | 5.33e-05 | 0.0 | 0.00 Modify | 0.28363 | 0.28363 | 0.28363 | 0.0 | 0.43 Other | | 0.03022 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 976000.0 ave 976000 max 976000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 976000 Ave neighs/atom = 122.00000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -57995.955 -57995.955 -58274.589 -58274.589 269.48364 269.48364 45217.862 45217.862 -2570.8057 -2570.8057 2000 -58024.898 -58024.898 -58295.452 -58295.452 261.67004 261.67004 45186.419 45186.419 191.61333 191.61333 Loop time of 66.7435 on 1 procs for 1000 steps with 8000 atoms Performance: 1.295 ns/day, 18.540 hours/ns, 14.983 timesteps/s 88.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 66.293 | 66.293 | 66.293 | 0.0 | 99.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.05858 | 0.05858 | 0.05858 | 0.0 | 0.09 Output | 4.45e-05 | 4.45e-05 | 4.45e-05 | 0.0 | 0.00 Modify | 0.35968 | 0.35968 | 0.35968 | 0.0 | 0.54 Other | | 0.03213 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8869.00 ave 8869 max 8869 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 922556.0 ave 922556 max 922556 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 922556 Ave neighs/atom = 115.31950 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -58024.898 -58024.898 -58295.452 -58295.452 261.67004 261.67004 45186.419 45186.419 191.61333 191.61333 3000 -58013.132 -58013.132 -58299.939 -58299.939 277.38839 277.38839 45174.036 45174.036 551.26198 551.26198 Loop time of 65.8881 on 1 procs for 1000 steps with 8000 atoms Performance: 1.311 ns/day, 18.302 hours/ns, 15.177 timesteps/s 90.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 65.406 | 65.406 | 65.406 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058267 | 0.058267 | 0.058267 | 0.0 | 0.09 Output | 5.42e-05 | 5.42e-05 | 5.42e-05 | 0.0 | 0.00 Modify | 0.37111 | 0.37111 | 0.37111 | 0.0 | 0.56 Other | | 0.05236 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8844.00 ave 8844 max 8844 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 925254.0 ave 925254 max 925254 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 925254 Ave neighs/atom = 115.65675 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -58013.132 -58013.132 -58299.939 -58299.939 277.38839 277.38839 45174.036 45174.036 551.26198 551.26198 4000 -58015.323 -58015.323 -58301.126 -58301.126 276.41734 276.41734 45206.554 45206.554 -1984.8898 -1984.8898 Loop time of 69.8544 on 1 procs for 1000 steps with 8000 atoms Performance: 1.237 ns/day, 19.404 hours/ns, 14.315 timesteps/s 85.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.416 | 69.416 | 69.416 | 0.0 | 99.37 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.079959 | 0.079959 | 0.079959 | 0.0 | 0.11 Output | 5.29e-05 | 5.29e-05 | 5.29e-05 | 0.0 | 0.00 Modify | 0.32575 | 0.32575 | 0.32575 | 0.0 | 0.47 Other | | 0.03269 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8857.00 ave 8857 max 8857 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 925286.0 ave 925286 max 925286 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 925286 Ave neighs/atom = 115.66075 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -58015.323 -58015.323 -58301.126 -58301.126 276.41734 276.41734 45206.554 45206.554 -1984.8898 -1984.8898 5000 -58019.901 -58019.901 -58302.694 -58302.694 273.50673 273.50673 45166.283 45166.283 1911.5634 1911.5634 Loop time of 65.2454 on 1 procs for 1000 steps with 8000 atoms Performance: 1.324 ns/day, 18.124 hours/ns, 15.327 timesteps/s 91.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 64.773 | 64.773 | 64.773 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058678 | 0.058678 | 0.058678 | 0.0 | 0.09 Output | 4.4e-05 | 4.4e-05 | 4.4e-05 | 0.0 | 0.00 Modify | 0.38106 | 0.38106 | 0.38106 | 0.0 | 0.58 Other | | 0.0325 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8852.00 ave 8852 max 8852 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 925016.0 ave 925016 max 925016 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 925016 Ave neighs/atom = 115.62700 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.680003822892, Press = -966.248825503592 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -58019.901 -58019.901 -58302.694 -58302.694 273.50673 273.50673 45166.283 45166.283 1911.5634 1911.5634 6000 -58010.973 -58010.973 -58302.355 -58302.355 281.81426 281.81426 45185.843 45185.843 906.64779 906.64779 Loop time of 65.9976 on 1 procs for 1000 steps with 8000 atoms Performance: 1.309 ns/day, 18.333 hours/ns, 15.152 timesteps/s 90.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 65.556 | 65.556 | 65.556 | 0.0 | 99.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.079093 | 0.079093 | 0.079093 | 0.0 | 0.12 Output | 4.33e-05 | 4.33e-05 | 4.33e-05 | 0.0 | 0.00 Modify | 0.32934 | 0.32934 | 0.32934 | 0.0 | 0.50 Other | | 0.03268 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8817.00 ave 8817 max 8817 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 926174.0 ave 926174 max 926174 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 926174 Ave neighs/atom = 115.77175 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.814498846894, Press = 62.7254265164969 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -58010.973 -58010.973 -58302.355 -58302.355 281.81426 281.81426 45185.843 45185.843 906.64779 906.64779 7000 -58021.213 -58021.213 -58296.29 -58296.29 266.04434 266.04434 45207.89 45207.89 -2385.2855 -2385.2855 Loop time of 69.1853 on 1 procs for 1000 steps with 8000 atoms Performance: 1.249 ns/day, 19.218 hours/ns, 14.454 timesteps/s 85.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.749 | 68.749 | 68.749 | 0.0 | 99.37 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058523 | 0.058523 | 0.058523 | 0.0 | 0.08 Output | 4.32e-05 | 4.32e-05 | 4.32e-05 | 0.0 | 0.00 Modify | 0.34573 | 0.34573 | 0.34573 | 0.0 | 0.50 Other | | 0.0324 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8827.00 ave 8827 max 8827 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 926594.0 ave 926594 max 926594 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 926594 Ave neighs/atom = 115.82425 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.98887749151, Press = -46.5853987312943 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -58021.213 -58021.213 -58296.29 -58296.29 266.04434 266.04434 45207.89 45207.89 -2385.2855 -2385.2855 8000 -58012.55 -58012.55 -58310.256 -58310.256 287.93043 287.93043 45172.399 45172.399 2316.0592 2316.0592 Loop time of 127.455 on 1 procs for 1000 steps with 8000 atoms Performance: 0.678 ns/day, 35.404 hours/ns, 7.846 timesteps/s 46.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 126.74 | 126.74 | 126.74 | 0.0 | 99.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11045 | 0.11045 | 0.11045 | 0.0 | 0.09 Output | 4.41e-05 | 4.41e-05 | 4.41e-05 | 0.0 | 0.00 Modify | 0.56727 | 0.56727 | 0.56727 | 0.0 | 0.45 Other | | 0.03333 | | | 0.03 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8855.00 ave 8855 max 8855 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 923502.0 ave 923502 max 923502 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 923502 Ave neighs/atom = 115.43775 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.123877288382, Press = -13.8833096159247 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -58012.55 -58012.55 -58310.256 -58310.256 287.93043 287.93043 45172.399 45172.399 2316.0592 2316.0592 9000 -58017.672 -58017.672 -58293.841 -58293.841 267.1001 267.1001 45202.688 45202.688 -2019.2653 -2019.2653 Loop time of 125.702 on 1 procs for 1000 steps with 8000 atoms Performance: 0.687 ns/day, 34.917 hours/ns, 7.955 timesteps/s 47.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 124.72 | 124.72 | 124.72 | 0.0 | 99.22 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.16071 | 0.16071 | 0.16071 | 0.0 | 0.13 Output | 3.66e-05 | 3.66e-05 | 3.66e-05 | 0.0 | 0.00 Modify | 0.72825 | 0.72825 | 0.72825 | 0.0 | 0.58 Other | | 0.09295 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8814.00 ave 8814 max 8814 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 928374.0 ave 928374 max 928374 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 928374 Ave neighs/atom = 116.04675 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.031328538204, Press = -7.85592913093212 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -58017.672 -58017.672 -58293.841 -58293.841 267.1001 267.1001 45202.688 45202.688 -2019.2653 -2019.2653 10000 -58018.725 -58018.725 -58300.153 -58300.153 272.18671 272.18671 45185.536 45185.536 616.25209 616.25209 Loop time of 125.457 on 1 procs for 1000 steps with 8000 atoms Performance: 0.689 ns/day, 34.849 hours/ns, 7.971 timesteps/s 47.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 124.63 | 124.63 | 124.63 | 0.0 | 99.34 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14502 | 0.14502 | 0.14502 | 0.0 | 0.12 Output | 3.58e-05 | 3.58e-05 | 3.58e-05 | 0.0 | 0.00 Modify | 0.61412 | 0.61412 | 0.61412 | 0.0 | 0.49 Other | | 0.06263 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8822.00 ave 8822 max 8822 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 923276.0 ave 923276 max 923276 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 923276 Ave neighs/atom = 115.40950 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.124222749104, Press = -21.6940219111915 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -58018.725 -58018.725 -58300.153 -58300.153 272.18671 272.18671 45185.536 45185.536 616.25209 616.25209 11000 -58012.037 -58012.037 -58294.207 -58294.207 272.90445 272.90445 45158.897 45158.897 2840.7848 2840.7848 Loop time of 123.637 on 1 procs for 1000 steps with 8000 atoms Performance: 0.699 ns/day, 34.344 hours/ns, 8.088 timesteps/s 47.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.88 | 122.88 | 122.88 | 0.0 | 99.39 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13027 | 0.13027 | 0.13027 | 0.0 | 0.11 Output | 3.57e-05 | 3.57e-05 | 3.57e-05 | 0.0 | 0.00 Modify | 0.57084 | 0.57084 | 0.57084 | 0.0 | 0.46 Other | | 0.05258 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8774.00 ave 8774 max 8774 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 926504.0 ave 926504 max 926504 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 926504 Ave neighs/atom = 115.81300 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.026681770858, Press = 4.55627732235716 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -58012.037 -58012.037 -58294.207 -58294.207 272.90445 272.90445 45158.897 45158.897 2840.7848 2840.7848 12000 -58018.671 -58018.671 -58300.332 -58300.332 272.41146 272.41146 45245.032 45245.032 -5892.22 -5892.22 Loop time of 122.137 on 1 procs for 1000 steps with 8000 atoms Performance: 0.707 ns/day, 33.927 hours/ns, 8.188 timesteps/s 48.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 121.27 | 121.27 | 121.27 | 0.0 | 99.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12008 | 0.12008 | 0.12008 | 0.0 | 0.10 Output | 4.4e-05 | 4.4e-05 | 4.4e-05 | 0.0 | 0.00 Modify | 0.65304 | 0.65304 | 0.65304 | 0.0 | 0.53 Other | | 0.09262 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8873.00 ave 8873 max 8873 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 925906.0 ave 925906 max 925906 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 925906 Ave neighs/atom = 115.73825 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.982067097089, Press = -9.92784052073993 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -58018.671 -58018.671 -58300.332 -58300.332 272.41146 272.41146 45245.032 45245.032 -5892.22 -5892.22 13000 -58012.946 -58012.946 -58299.304 -58299.304 276.95493 276.95493 45174.268 45174.268 1384.9688 1384.9688 Loop time of 119.279 on 1 procs for 1000 steps with 8000 atoms Performance: 0.724 ns/day, 33.133 hours/ns, 8.384 timesteps/s 49.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 118.46 | 118.46 | 118.46 | 0.0 | 99.31 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10165 | 0.10165 | 0.10165 | 0.0 | 0.09 Output | 4.44e-05 | 4.44e-05 | 4.44e-05 | 0.0 | 0.00 Modify | 0.66826 | 0.66826 | 0.66826 | 0.0 | 0.56 Other | | 0.05346 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8823.00 ave 8823 max 8823 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 923034.0 ave 923034 max 923034 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 923034 Ave neighs/atom = 115.37925 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.901099839123, Press = -9.14765422362122 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -58012.946 -58012.946 -58299.304 -58299.304 276.95493 276.95493 45174.268 45174.268 1384.9688 1384.9688 14000 -58026.327 -58026.327 -58310.961 -58310.961 275.28775 275.28775 45182.767 45182.767 255.4779 255.4779 Loop time of 107.589 on 1 procs for 1000 steps with 8000 atoms Performance: 0.803 ns/day, 29.886 hours/ns, 9.295 timesteps/s 55.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 106.93 | 106.93 | 106.93 | 0.0 | 99.39 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11962 | 0.11962 | 0.11962 | 0.0 | 0.11 Output | 4.42e-05 | 4.42e-05 | 4.42e-05 | 0.0 | 0.00 Modify | 0.46006 | 0.46006 | 0.46006 | 0.0 | 0.43 Other | | 0.07714 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8823.00 ave 8823 max 8823 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 926428.0 ave 926428 max 926428 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 926428 Ave neighs/atom = 115.80350 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.827807535897, Press = -2.36346126330304 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -58026.327 -58026.327 -58310.961 -58310.961 275.28775 275.28775 45182.767 45182.767 255.4779 255.4779 15000 -58014.748 -58014.748 -58296.022 -58296.022 272.03759 272.03759 45198.996 45198.996 -1361.1515 -1361.1515 Loop time of 118.529 on 1 procs for 1000 steps with 8000 atoms Performance: 0.729 ns/day, 32.925 hours/ns, 8.437 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 117.86 | 117.86 | 117.86 | 0.0 | 99.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10955 | 0.10955 | 0.10955 | 0.0 | 0.09 Output | 4.46e-05 | 4.46e-05 | 4.46e-05 | 0.0 | 0.00 Modify | 0.50632 | 0.50632 | 0.50632 | 0.0 | 0.43 Other | | 0.05277 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8810.00 ave 8810 max 8810 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 927476.0 ave 927476 max 927476 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 927476 Ave neighs/atom = 115.93450 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.815900507654, Press = -8.42162702081771 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -58014.748 -58014.748 -58296.022 -58296.022 272.03759 272.03759 45198.996 45198.996 -1361.1515 -1361.1515 16000 -58015.909 -58015.909 -58301.379 -58301.379 276.09641 276.09641 45156.845 45156.845 3245.0329 3245.0329 Loop time of 106.621 on 1 procs for 1000 steps with 8000 atoms Performance: 0.810 ns/day, 29.617 hours/ns, 9.379 timesteps/s 55.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 105.91 | 105.91 | 105.91 | 0.0 | 99.34 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.18957 | 0.18957 | 0.18957 | 0.0 | 0.18 Output | 5.98e-05 | 5.98e-05 | 5.98e-05 | 0.0 | 0.00 Modify | 0.46515 | 0.46515 | 0.46515 | 0.0 | 0.44 Other | | 0.05257 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8821.00 ave 8821 max 8821 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 924466.0 ave 924466 max 924466 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 924466 Ave neighs/atom = 115.55825 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.818609108497, Press = -3.69165903262488 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -58015.909 -58015.909 -58301.379 -58301.379 276.09641 276.09641 45156.845 45156.845 3245.0329 3245.0329 17000 -58016.796 -58016.796 -58296.833 -58296.833 270.84134 270.84134 45223.663 45223.663 -4040.203 -4040.203 Loop time of 94.242 on 1 procs for 1000 steps with 8000 atoms Performance: 0.917 ns/day, 26.178 hours/ns, 10.611 timesteps/s 63.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 93.644 | 93.644 | 93.644 | 0.0 | 99.37 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.099328 | 0.099328 | 0.099328 | 0.0 | 0.11 Output | 4.45e-05 | 4.45e-05 | 4.45e-05 | 0.0 | 0.00 Modify | 0.46568 | 0.46568 | 0.46568 | 0.0 | 0.49 Other | | 0.03266 | | | 0.03 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8813.00 ave 8813 max 8813 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 926698.0 ave 926698 max 926698 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 926698 Ave neighs/atom = 115.83725 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.851693731848, Press = 0.278761985656836 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -58016.796 -58016.796 -58296.833 -58296.833 270.84134 270.84134 45223.663 45223.663 -4040.203 -4040.203 18000 -58015.766 -58015.766 -58305.404 -58305.404 280.12719 280.12719 45183.174 45183.174 643.61125 643.61125 Loop time of 103.261 on 1 procs for 1000 steps with 8000 atoms Performance: 0.837 ns/day, 28.684 hours/ns, 9.684 timesteps/s 57.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 102.57 | 102.57 | 102.57 | 0.0 | 99.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11941 | 0.11941 | 0.11941 | 0.0 | 0.12 Output | 4.52e-05 | 4.52e-05 | 4.52e-05 | 0.0 | 0.00 Modify | 0.47616 | 0.47616 | 0.47616 | 0.0 | 0.46 Other | | 0.09251 | | | 0.09 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8862.00 ave 8862 max 8862 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 923010.0 ave 923010 max 923010 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 923010 Ave neighs/atom = 115.37625 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.849710933592, Press = -8.57306063800756 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -58015.766 -58015.766 -58305.404 -58305.404 280.12719 280.12719 45183.174 45183.174 643.61125 643.61125 19000 -58020.401 -58020.401 -58301.996 -58301.996 272.34852 272.34852 45175.685 45175.685 833.73521 833.73521 Loop time of 105.667 on 1 procs for 1000 steps with 8000 atoms Performance: 0.818 ns/day, 29.352 hours/ns, 9.464 timesteps/s 56.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 104.87 | 104.87 | 104.87 | 0.0 | 99.25 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.079901 | 0.079901 | 0.079901 | 0.0 | 0.08 Output | 3.63e-05 | 3.63e-05 | 3.63e-05 | 0.0 | 0.00 Modify | 0.68493 | 0.68493 | 0.68493 | 0.0 | 0.65 Other | | 0.03276 | | | 0.03 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8834.00 ave 8834 max 8834 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 927068.0 ave 927068 max 927068 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 927068 Ave neighs/atom = 115.88350 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.856244544625, Press = -0.336987238347855 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -58020.401 -58020.401 -58301.996 -58301.996 272.34852 272.34852 45175.685 45175.685 833.73521 833.73521 20000 -58013.864 -58013.864 -58301.423 -58301.423 278.1161 278.1161 45209.988 45209.988 -2086.8654 -2086.8654 Loop time of 106.466 on 1 procs for 1000 steps with 8000 atoms Performance: 0.812 ns/day, 29.574 hours/ns, 9.393 timesteps/s 56.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 105.79 | 105.79 | 105.79 | 0.0 | 99.36 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10088 | 0.10088 | 0.10088 | 0.0 | 0.09 Output | 4.45e-05 | 4.45e-05 | 4.45e-05 | 0.0 | 0.00 Modify | 0.50521 | 0.50521 | 0.50521 | 0.0 | 0.47 Other | | 0.07319 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8774.00 ave 8774 max 8774 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 926234.0 ave 926234 max 926234 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 926234 Ave neighs/atom = 115.77925 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.926109794634, Press = -4.62620067145808 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -58013.864 -58013.864 -58301.423 -58301.423 278.1161 278.1161 45209.988 45209.988 -2086.8654 -2086.8654 21000 -58018.312 -58018.312 -58299.513 -58299.513 271.96711 271.96711 45163 45163 2579.8903 2579.8903 Loop time of 103.606 on 1 procs for 1000 steps with 8000 atoms Performance: 0.834 ns/day, 28.780 hours/ns, 9.652 timesteps/s 57.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 102.98 | 102.98 | 102.98 | 0.0 | 99.39 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11993 | 0.11993 | 0.11993 | 0.0 | 0.12 Output | 7.56e-05 | 7.56e-05 | 7.56e-05 | 0.0 | 0.00 Modify | 0.45618 | 0.45618 | 0.45618 | 0.0 | 0.44 Other | | 0.05276 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8802.00 ave 8802 max 8802 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 925172.0 ave 925172 max 925172 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 925172 Ave neighs/atom = 115.64650 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.929597490891, Press = -4.40792861619574 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -58018.312 -58018.312 -58299.513 -58299.513 271.96711 271.96711 45163 45163 2579.8903 2579.8903 22000 -58019.373 -58019.373 -58302.915 -58302.915 274.23123 274.23123 45203.609 45203.609 -1764.5188 -1764.5188 Loop time of 97.8282 on 1 procs for 1000 steps with 8000 atoms Performance: 0.883 ns/day, 27.175 hours/ns, 10.222 timesteps/s 60.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 97.18 | 97.18 | 97.18 | 0.0 | 99.34 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.05967 | 0.05967 | 0.05967 | 0.0 | 0.06 Output | 4.55e-05 | 4.55e-05 | 4.55e-05 | 0.0 | 0.00 Modify | 0.51602 | 0.51602 | 0.51602 | 0.0 | 0.53 Other | | 0.07278 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8855.00 ave 8855 max 8855 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 926622.0 ave 926622 max 926622 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 926622 Ave neighs/atom = 115.82775 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.956333015852, Press = 1.378218802068 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -58019.373 -58019.373 -58302.915 -58302.915 274.23123 274.23123 45203.609 45203.609 -1764.5188 -1764.5188 23000 -58014.276 -58014.276 -58297.831 -58297.831 274.2437 274.2437 45201.799 45201.799 -1576.1616 -1576.1616 Loop time of 106.445 on 1 procs for 1000 steps with 8000 atoms Performance: 0.812 ns/day, 29.568 hours/ns, 9.395 timesteps/s 55.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 105.81 | 105.81 | 105.81 | 0.0 | 99.40 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.079265 | 0.079265 | 0.079265 | 0.0 | 0.07 Output | 4.46e-05 | 4.46e-05 | 4.46e-05 | 0.0 | 0.00 Modify | 0.50626 | 0.50626 | 0.50626 | 0.0 | 0.48 Other | | 0.05263 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8781.00 ave 8781 max 8781 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 925292.0 ave 925292 max 925292 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 925292 Ave neighs/atom = 115.66150 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.98758823266, Press = -8.1537539184507 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -58014.276 -58014.276 -58297.831 -58297.831 274.2437 274.2437 45201.799 45201.799 -1576.1616 -1576.1616 24000 -58013.063 -58013.063 -58297.583 -58297.583 275.17734 275.17734 45164.202 45164.202 2531.2326 2531.2326 Loop time of 94.5178 on 1 procs for 1000 steps with 8000 atoms Performance: 0.914 ns/day, 26.255 hours/ns, 10.580 timesteps/s 62.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 93.919 | 93.919 | 93.919 | 0.0 | 99.37 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.079886 | 0.079886 | 0.079886 | 0.0 | 0.08 Output | 4.37e-05 | 4.37e-05 | 4.37e-05 | 0.0 | 0.00 Modify | 0.48594 | 0.48594 | 0.48594 | 0.0 | 0.51 Other | | 0.0325 | | | 0.03 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8862.00 ave 8862 max 8862 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 924832.0 ave 924832 max 924832 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 924832 Ave neighs/atom = 115.60400 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T273.15.out" else "print 'not_converged' file output/vol_T273.15.out" print '${V}' file output/vol_T273.15.out 45187.8286077441 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0