# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.5577528923749933*${_u_distance} variable latticeconst_converted equal 3.5577528923749933*1 lattice diamond ${latticeconst_converted} lattice diamond 3.55775289237499 Lattice spacing in x,y,z = 3.5577529 3.5577529 3.5577529 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (35.577529 35.577529 35.577529) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms create_atoms CPU = 0.002 seconds variable mass_converted equal 12.0107*${_u_mass} variable mass_converted equal 12.0107*1 kim_interactions C #=== BEGIN kim_interactions ================================== pair_style kim Tersoff_LAMMPS_AlbeNordlundAverback_2002_PtC__MO_500121566391_003 pair_coeff * * C #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 12.0107 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 45032.6330876461 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 45032.6330876461/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 45032.6330876461/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 45032.6330876461/(1*1*${_u_distance}) variable V0_metal equal 45032.6330876461/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 45032.6330876461*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 45032.6330876461 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.71 | 12.71 | 12.71 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -58282.626 -58282.626 -58585.729 -58585.729 293.15 293.15 45032.633 45032.633 7189.1539 7189.1539 1000 -57952.563 -57952.563 -58251.571 -58251.571 289.18902 289.18902 45182.648 45182.648 2437.4401 2437.4401 Loop time of 66.0682 on 1 procs for 1000 steps with 8000 atoms Performance: 1.308 ns/day, 18.352 hours/ns, 15.136 timesteps/s 81.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 65.603 | 65.603 | 65.603 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.066117 | 0.066117 | 0.066117 | 0.0 | 0.10 Output | 5.5e-05 | 5.5e-05 | 5.5e-05 | 0.0 | 0.00 Modify | 0.32933 | 0.32933 | 0.32933 | 0.0 | 0.50 Other | | 0.07014 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 976000.0 ave 976000 max 976000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 976000 Ave neighs/atom = 122.00000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -57952.563 -57952.563 -58251.571 -58251.571 289.18902 289.18902 45182.648 45182.648 2437.4401 2437.4401 2000 -57983.689 -57983.689 -58272.163 -58272.163 279.00092 279.00092 45202.915 45202.915 -186.56238 -186.56238 Loop time of 66.0481 on 1 procs for 1000 steps with 8000 atoms Performance: 1.308 ns/day, 18.347 hours/ns, 15.140 timesteps/s 90.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 65.605 | 65.605 | 65.605 | 0.0 | 99.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.068049 | 0.068049 | 0.068049 | 0.0 | 0.10 Output | 6.61e-05 | 6.61e-05 | 6.61e-05 | 0.0 | 0.00 Modify | 0.3428 | 0.3428 | 0.3428 | 0.0 | 0.52 Other | | 0.03251 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8919.00 ave 8919 max 8919 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 922806.0 ave 922806 max 922806 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 922806 Ave neighs/atom = 115.35075 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -57983.689 -57983.689 -58272.163 -58272.163 279.00092 279.00092 45202.915 45202.915 -186.56238 -186.56238 3000 -57970.94 -57970.94 -58276.152 -58276.152 295.19025 295.19025 45221.427 45221.427 -3157.4458 -3157.4458 Loop time of 66.4229 on 1 procs for 1000 steps with 8000 atoms Performance: 1.301 ns/day, 18.451 hours/ns, 15.055 timesteps/s 90.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 65.938 | 65.938 | 65.938 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.079248 | 0.079248 | 0.079248 | 0.0 | 0.12 Output | 4.97e-05 | 4.97e-05 | 4.97e-05 | 0.0 | 0.00 Modify | 0.36299 | 0.36299 | 0.36299 | 0.0 | 0.55 Other | | 0.04241 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8846.00 ave 8846 max 8846 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 923022.0 ave 923022 max 923022 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 923022 Ave neighs/atom = 115.37775 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -57970.94 -57970.94 -58276.152 -58276.152 295.19025 295.19025 45221.427 45221.427 -3157.4458 -3157.4458 4000 -57973.512 -57973.512 -58285.164 -58285.164 301.41741 301.41741 45217.675 45217.675 -1937.083 -1937.083 Loop time of 71.1911 on 1 procs for 1000 steps with 8000 atoms Performance: 1.214 ns/day, 19.775 hours/ns, 14.047 timesteps/s 83.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 70.776 | 70.776 | 70.776 | 0.0 | 99.42 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.059471 | 0.059471 | 0.059471 | 0.0 | 0.08 Output | 5.08e-05 | 5.08e-05 | 5.08e-05 | 0.0 | 0.00 Modify | 0.32333 | 0.32333 | 0.32333 | 0.0 | 0.45 Other | | 0.03259 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8863.00 ave 8863 max 8863 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 921456.0 ave 921456 max 921456 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 921456 Ave neighs/atom = 115.18200 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -57973.512 -57973.512 -58285.164 -58285.164 301.41741 301.41741 45217.675 45217.675 -1937.083 -1937.083 5000 -57978.225 -57978.225 -58277.935 -58277.935 289.86894 289.86894 45207.26 45207.26 -1112.9765 -1112.9765 Loop time of 68.3751 on 1 procs for 1000 steps with 8000 atoms Performance: 1.264 ns/day, 18.993 hours/ns, 14.625 timesteps/s 87.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 67.911 | 67.911 | 67.911 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.098765 | 0.098765 | 0.098765 | 0.0 | 0.14 Output | 4.48e-05 | 4.48e-05 | 4.48e-05 | 0.0 | 0.00 Modify | 0.33296 | 0.33296 | 0.33296 | 0.0 | 0.49 Other | | 0.03251 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8856.00 ave 8856 max 8856 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 923590.0 ave 923590 max 923590 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 923590 Ave neighs/atom = 115.44875 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.708205272577, Press = -671.585516163146 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -57978.225 -57978.225 -58277.935 -58277.935 289.86894 289.86894 45207.26 45207.26 -1112.9765 -1112.9765 6000 -57968.745 -57968.745 -58281.082 -58281.082 302.08067 302.08067 45176.076 45176.076 3077.1773 3077.1773 Loop time of 65.0043 on 1 procs for 1000 steps with 8000 atoms Performance: 1.329 ns/day, 18.057 hours/ns, 15.384 timesteps/s 91.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 64.553 | 64.553 | 64.553 | 0.0 | 99.31 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057831 | 0.057831 | 0.057831 | 0.0 | 0.09 Output | 4.5e-05 | 4.5e-05 | 4.5e-05 | 0.0 | 0.00 Modify | 0.3614 | 0.3614 | 0.3614 | 0.0 | 0.56 Other | | 0.03214 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8811.00 ave 8811 max 8811 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 922790.0 ave 922790 max 922790 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 922790 Ave neighs/atom = 115.34875 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.764684119551, Press = -92.5462840303547 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -57968.745 -57968.745 -58281.082 -58281.082 302.08067 302.08067 45176.076 45176.076 3077.1773 3077.1773 7000 -57979.703 -57979.703 -58277.555 -58277.555 288.07144 288.07144 45166.737 45166.737 3136.702 3136.702 Loop time of 71.8299 on 1 procs for 1000 steps with 8000 atoms Performance: 1.203 ns/day, 19.953 hours/ns, 13.922 timesteps/s 83.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 71.324 | 71.324 | 71.324 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.088068 | 0.088068 | 0.088068 | 0.0 | 0.12 Output | 3.58e-05 | 3.58e-05 | 3.58e-05 | 0.0 | 0.00 Modify | 0.38511 | 0.38511 | 0.38511 | 0.0 | 0.54 Other | | 0.03243 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8851.00 ave 8851 max 8851 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 925328.0 ave 925328 max 925328 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 925328 Ave neighs/atom = 115.66600 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.994417238389, Press = -6.52994769409707 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -57979.703 -57979.703 -58277.555 -58277.555 288.07144 288.07144 45166.737 45166.737 3136.702 3136.702 8000 -57970.255 -57970.255 -58283.912 -58283.912 303.35687 303.35687 45184.879 45184.879 2542.3285 2542.3285 Loop time of 127.668 on 1 procs for 1000 steps with 8000 atoms Performance: 0.677 ns/day, 35.463 hours/ns, 7.833 timesteps/s 46.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 126.83 | 126.83 | 126.83 | 0.0 | 99.34 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12269 | 0.12269 | 0.12269 | 0.0 | 0.10 Output | 4.52e-05 | 4.52e-05 | 4.52e-05 | 0.0 | 0.00 Modify | 0.64088 | 0.64088 | 0.64088 | 0.0 | 0.50 Other | | 0.07308 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8894.00 ave 8894 max 8894 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 924266.0 ave 924266 max 924266 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 924266 Ave neighs/atom = 115.53325 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.104615014894, Press = 8.14789269605281 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -57970.255 -57970.255 -58283.912 -58283.912 303.35687 303.35687 45184.879 45184.879 2542.3285 2542.3285 9000 -57975.989 -57975.989 -58274.493 -58274.493 288.70217 288.70217 45195.876 45195.876 -10.460805 -10.460805 Loop time of 128.446 on 1 procs for 1000 steps with 8000 atoms Performance: 0.673 ns/day, 35.679 hours/ns, 7.785 timesteps/s 46.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.54 | 127.54 | 127.54 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10189 | 0.10189 | 0.10189 | 0.0 | 0.08 Output | 4.6e-05 | 4.6e-05 | 4.6e-05 | 0.0 | 0.00 Modify | 0.76788 | 0.76788 | 0.76788 | 0.0 | 0.60 Other | | 0.03279 | | | 0.03 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8834.00 ave 8834 max 8834 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 925744.0 ave 925744 max 925744 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 925744 Ave neighs/atom = 115.71800 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.032785923777, Press = 10.6828758247783 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -57975.989 -57975.989 -58274.493 -58274.493 288.70217 288.70217 45195.876 45195.876 -10.460805 -10.460805 10000 -57976.956 -57976.956 -58281.948 -58281.948 294.97691 294.97691 45212.929 45212.929 -1290.4788 -1290.4788 Loop time of 125 on 1 procs for 1000 steps with 8000 atoms Performance: 0.691 ns/day, 34.722 hours/ns, 8.000 timesteps/s 47.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 124.21 | 124.21 | 124.21 | 0.0 | 99.37 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14309 | 0.14309 | 0.14309 | 0.0 | 0.11 Output | 4.61e-05 | 4.61e-05 | 4.61e-05 | 0.0 | 0.00 Modify | 0.60922 | 0.60922 | 0.60922 | 0.0 | 0.49 Other | | 0.03281 | | | 0.03 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8865.00 ave 8865 max 8865 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 922458.0 ave 922458 max 922458 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 922458 Ave neighs/atom = 115.30725 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.125361499711, Press = 8.3217960296827 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -57976.956 -57976.956 -58281.948 -58281.948 294.97691 294.97691 45212.929 45212.929 -1290.4788 -1290.4788 11000 -57969.895 -57969.895 -58271.424 -58271.424 291.62793 291.62793 45245.299 45245.299 -4933.749 -4933.749 Loop time of 124.665 on 1 procs for 1000 steps with 8000 atoms Performance: 0.693 ns/day, 34.629 hours/ns, 8.022 timesteps/s 47.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.67 | 123.67 | 123.67 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11027 | 0.11027 | 0.11027 | 0.0 | 0.09 Output | 4.57e-05 | 4.57e-05 | 4.57e-05 | 0.0 | 0.00 Modify | 0.80933 | 0.80933 | 0.80933 | 0.0 | 0.65 Other | | 0.07384 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8850.00 ave 8850 max 8850 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 924016.0 ave 924016 max 924016 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 924016 Ave neighs/atom = 115.50200 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.023130986297, Press = -0.469380984486438 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -57969.895 -57969.895 -58271.424 -58271.424 291.62793 291.62793 45245.299 45245.299 -4933.749 -4933.749 12000 -57976.682 -57976.682 -58276.367 -58276.367 289.84432 289.84432 45246.965 45246.965 -4933.2289 -4933.2289 Loop time of 120.167 on 1 procs for 1000 steps with 8000 atoms Performance: 0.719 ns/day, 33.380 hours/ns, 8.322 timesteps/s 48.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 119.42 | 119.42 | 119.42 | 0.0 | 99.38 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10055 | 0.10055 | 0.10055 | 0.0 | 0.08 Output | 4.95e-05 | 4.95e-05 | 4.95e-05 | 0.0 | 0.00 Modify | 0.61716 | 0.61716 | 0.61716 | 0.0 | 0.51 Other | | 0.03289 | | | 0.03 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8834.00 ave 8834 max 8834 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 920602.0 ave 920602 max 920602 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 920602 Ave neighs/atom = 115.07525 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.965203414929, Press = -12.6089089745695 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -57976.682 -57976.682 -58276.367 -58276.367 289.84432 289.84432 45246.965 45246.965 -4933.2289 -4933.2289 13000 -57971.246 -57971.246 -58273.717 -58273.717 292.53884 292.53884 45204.322 45204.322 -493.43351 -493.43351 Loop time of 118.763 on 1 procs for 1000 steps with 8000 atoms Performance: 0.727 ns/day, 32.990 hours/ns, 8.420 timesteps/s 49.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 117.84 | 117.84 | 117.84 | 0.0 | 99.23 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.08294 | 0.08294 | 0.08294 | 0.0 | 0.07 Output | 3.73e-05 | 3.73e-05 | 3.73e-05 | 0.0 | 0.00 Modify | 0.80223 | 0.80223 | 0.80223 | 0.0 | 0.68 Other | | 0.0332 | | | 0.03 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8826.00 ave 8826 max 8826 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 920944.0 ave 920944 max 920944 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 920944 Ave neighs/atom = 115.11800 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.892504860205, Press = -5.28494074833155 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -57971.246 -57971.246 -58273.717 -58273.717 292.53884 292.53884 45204.322 45204.322 -493.43351 -493.43351 14000 -57984.258 -57984.258 -58280.111 -58280.111 286.1384 286.1384 45189.414 45189.414 753.38444 753.38444 Loop time of 111.016 on 1 procs for 1000 steps with 8000 atoms Performance: 0.778 ns/day, 30.838 hours/ns, 9.008 timesteps/s 53.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 110.3 | 110.3 | 110.3 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.090966 | 0.090966 | 0.090966 | 0.0 | 0.08 Output | 4.59e-05 | 4.59e-05 | 4.59e-05 | 0.0 | 0.00 Modify | 0.5721 | 0.5721 | 0.5721 | 0.0 | 0.52 Other | | 0.05722 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8847.00 ave 8847 max 8847 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 923750.0 ave 923750 max 923750 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 923750 Ave neighs/atom = 115.46875 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.803143057253, Press = -3.83701388018224 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -57984.258 -57984.258 -58280.111 -58280.111 286.1384 286.1384 45189.414 45189.414 753.38444 753.38444 15000 -57973.816 -57973.816 -58277.108 -58277.108 293.33332 293.33332 45182.088 45182.088 1792.0369 1792.0369 Loop time of 119.392 on 1 procs for 1000 steps with 8000 atoms Performance: 0.724 ns/day, 33.164 hours/ns, 8.376 timesteps/s 49.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 118.53 | 118.53 | 118.53 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10986 | 0.10986 | 0.10986 | 0.0 | 0.09 Output | 4.5e-05 | 4.5e-05 | 4.5e-05 | 0.0 | 0.00 Modify | 0.71722 | 0.71722 | 0.71722 | 0.0 | 0.60 Other | | 0.03273 | | | 0.03 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8840.00 ave 8840 max 8840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 923882.0 ave 923882 max 923882 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 923882 Ave neighs/atom = 115.48525 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.796347917977, Press = -1.3304180127229 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -57973.816 -57973.816 -58277.108 -58277.108 293.33332 293.33332 45182.088 45182.088 1792.0369 1792.0369 16000 -57974.887 -57974.887 -58276.914 -58276.914 292.10959 292.10959 45170.857 45170.857 3152.2588 3152.2588 Loop time of 120.234 on 1 procs for 1000 steps with 8000 atoms Performance: 0.719 ns/day, 33.398 hours/ns, 8.317 timesteps/s 49.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 119.54 | 119.54 | 119.54 | 0.0 | 99.42 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.081696 | 0.081696 | 0.081696 | 0.0 | 0.07 Output | 4.54e-05 | 4.54e-05 | 4.54e-05 | 0.0 | 0.00 Modify | 0.56269 | 0.56269 | 0.56269 | 0.0 | 0.47 Other | | 0.05357 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8876.00 ave 8876 max 8876 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 924158.0 ave 924158 max 924158 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 924158 Ave neighs/atom = 115.51975 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.757595902255, Press = 4.15466219026851 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -57974.887 -57974.887 -58276.914 -58276.914 292.10959 292.10959 45170.857 45170.857 3152.2588 3152.2588 17000 -57972.669 -57972.669 -58277.274 -58277.274 294.60265 294.60265 45187.398 45187.398 1074.7012 1074.7012 Loop time of 108.557 on 1 procs for 1000 steps with 8000 atoms Performance: 0.796 ns/day, 30.155 hours/ns, 9.212 timesteps/s 54.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 107.79 | 107.79 | 107.79 | 0.0 | 99.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10012 | 0.10012 | 0.10012 | 0.0 | 0.09 Output | 4.46e-05 | 4.46e-05 | 4.46e-05 | 0.0 | 0.00 Modify | 0.61795 | 0.61795 | 0.61795 | 0.0 | 0.57 Other | | 0.05263 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8848.00 ave 8848 max 8848 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 924500.0 ave 924500 max 924500 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 924500 Ave neighs/atom = 115.56250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.823394183337, Press = 10.1959657692306 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -57972.669 -57972.669 -58277.274 -58277.274 294.60265 294.60265 45187.398 45187.398 1074.7012 1074.7012 18000 -57974.338 -57974.338 -58278.525 -58278.525 294.19793 294.19793 45214.488 45214.488 -1373.0628 -1373.0628 Loop time of 107.848 on 1 procs for 1000 steps with 8000 atoms Performance: 0.801 ns/day, 29.958 hours/ns, 9.272 timesteps/s 54.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 107.21 | 107.21 | 107.21 | 0.0 | 99.41 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11982 | 0.11982 | 0.11982 | 0.0 | 0.11 Output | 3.74e-05 | 3.74e-05 | 3.74e-05 | 0.0 | 0.00 Modify | 0.46683 | 0.46683 | 0.46683 | 0.0 | 0.43 Other | | 0.0522 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8855.00 ave 8855 max 8855 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 924006.0 ave 924006 max 924006 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 924006 Ave neighs/atom = 115.50075 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.891320993465, Press = 4.95082511133515 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -57974.338 -57974.338 -58278.525 -58278.525 294.19793 294.19793 45214.488 45214.488 -1373.0628 -1373.0628 19000 -57979.453 -57979.453 -58281.16 -58281.16 291.79982 291.79982 45226.393 45226.393 -3059.9838 -3059.9838 Loop time of 100.272 on 1 procs for 1000 steps with 8000 atoms Performance: 0.862 ns/day, 27.853 hours/ns, 9.973 timesteps/s 60.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 99.63 | 99.63 | 99.63 | 0.0 | 99.36 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.080055 | 0.080055 | 0.080055 | 0.0 | 0.08 Output | 4.61e-05 | 4.61e-05 | 4.61e-05 | 0.0 | 0.00 Modify | 0.50897 | 0.50897 | 0.50897 | 0.0 | 0.51 Other | | 0.05275 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8833.00 ave 8833 max 8833 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 923534.0 ave 923534 max 923534 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 923534 Ave neighs/atom = 115.44175 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.958882570991, Press = 1.36128999142361 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -57979.453 -57979.453 -58281.16 -58281.16 291.79982 291.79982 45226.393 45226.393 -3059.9838 -3059.9838 20000 -57972.029 -57972.029 -58280.297 -58280.297 298.14551 298.14551 45224.508 45224.508 -2763.2773 -2763.2773 Loop time of 105.679 on 1 procs for 1000 steps with 8000 atoms Performance: 0.818 ns/day, 29.355 hours/ns, 9.463 timesteps/s 56.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 104.84 | 104.84 | 104.84 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.061568 | 0.061568 | 0.061568 | 0.0 | 0.06 Output | 4.5e-05 | 4.5e-05 | 4.5e-05 | 0.0 | 0.00 Modify | 0.70371 | 0.70371 | 0.70371 | 0.0 | 0.67 Other | | 0.07546 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8786.00 ave 8786 max 8786 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 923064.0 ave 923064 max 923064 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 923064 Ave neighs/atom = 115.38300 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.984660393324, Press = -1.82542429084119 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -57972.029 -57972.029 -58280.297 -58280.297 298.14551 298.14551 45224.508 45224.508 -2763.2773 -2763.2773 21000 -57971.963 -57971.963 -58274.663 -58274.663 292.76031 292.76031 45208.498 45208.498 -845.3124 -845.3124 Loop time of 101.163 on 1 procs for 1000 steps with 8000 atoms Performance: 0.854 ns/day, 28.101 hours/ns, 9.885 timesteps/s 58.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 100.46 | 100.46 | 100.46 | 0.0 | 99.31 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1346 | 0.1346 | 0.1346 | 0.0 | 0.13 Output | 6.02e-05 | 6.02e-05 | 6.02e-05 | 0.0 | 0.00 Modify | 0.5122 | 0.5122 | 0.5122 | 0.0 | 0.51 Other | | 0.05612 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8822.00 ave 8822 max 8822 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 922790.0 ave 922790 max 922790 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 922790 Ave neighs/atom = 115.34875 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.97339582694, Press = -2.86075651175121 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -57971.963 -57971.963 -58274.663 -58274.663 292.76031 292.76031 45208.498 45208.498 -845.3124 -845.3124 22000 -57975.613 -57975.613 -58279.83 -58279.83 294.22812 294.22812 45190.414 45190.414 923.51662 923.51662 Loop time of 103.003 on 1 procs for 1000 steps with 8000 atoms Performance: 0.839 ns/day, 28.612 hours/ns, 9.708 timesteps/s 57.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 102.3 | 102.3 | 102.3 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12642 | 0.12642 | 0.12642 | 0.0 | 0.12 Output | 4.56e-05 | 4.56e-05 | 4.56e-05 | 0.0 | 0.00 Modify | 0.46287 | 0.46287 | 0.46287 | 0.0 | 0.45 Other | | 0.1127 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8831.00 ave 8831 max 8831 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 922976.0 ave 922976 max 922976 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 922976 Ave neighs/atom = 115.37200 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.056016154375, Press = -1.74952068031678 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -57975.613 -57975.613 -58279.83 -58279.83 294.22812 294.22812 45190.414 45190.414 923.51662 923.51662 23000 -57962.143 -57962.143 -58272.458 -58272.458 300.12545 300.12545 45186.048 45186.048 2169.5707 2169.5707 Loop time of 102.584 on 1 procs for 1000 steps with 8000 atoms Performance: 0.842 ns/day, 28.496 hours/ns, 9.748 timesteps/s 57.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 101.98 | 101.98 | 101.98 | 0.0 | 99.41 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.069464 | 0.069464 | 0.069464 | 0.0 | 0.07 Output | 3.75e-05 | 3.75e-05 | 3.75e-05 | 0.0 | 0.00 Modify | 0.50063 | 0.50063 | 0.50063 | 0.0 | 0.49 Other | | 0.03249 | | | 0.03 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8836.00 ave 8836 max 8836 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 924218.0 ave 924218 max 924218 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 924218 Ave neighs/atom = 115.52725 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 45199.1789060227 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0