# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.5577528923749933*${_u_distance} variable latticeconst_converted equal 3.5577528923749933*1 lattice diamond ${latticeconst_converted} lattice diamond 3.55775289237499 Lattice spacing in x,y,z = 3.5577529 3.5577529 3.5577529 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (35.577529 35.577529 35.577529) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (35.577529 35.577529 35.577529) create_atoms CPU = 0.003 seconds variable mass_converted equal 12.0107*${_u_mass} variable mass_converted equal 12.0107*1 kim_interactions C WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions C #=== BEGIN kim interactions ================================== pair_style kim Tersoff_LAMMPS_AlbeNordlundAverback_2002_PtC__MO_500121566391_004 pair_coeff * * C #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 12.0107 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 45032.6330876461 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 45032.6330876461/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 45032.6330876461/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 45032.6330876461/(1*1*${_u_distance}) variable V0_metal equal 45032.6330876461/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 45032.6330876461*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 45032.6330876461 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 273.15*${_u_temperature} variable temp_converted equal 273.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 273.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "273.15 - 0.2" variable T_up equal "273.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_500121566391_004#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.71 | 12.71 | 12.71 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -58303.305 -58303.305 -58585.729 -58585.729 273.15 273.15 45032.633 45032.633 6698.673 6698.673 1000 -57995.955 -57995.955 -58274.589 -58274.589 269.48364 269.48364 45217.862 45217.862 -2570.8057 -2570.8057 Loop time of 126.446 on 1 procs for 1000 steps with 8000 atoms Performance: 0.683 ns/day, 35.124 hours/ns, 7.909 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 125.59 | 125.59 | 125.59 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.087491 | 0.087491 | 0.087491 | 0.0 | 0.07 Output | 0.0002871 | 0.0002871 | 0.0002871 | 0.0 | 0.00 Modify | 0.67793 | 0.67793 | 0.67793 | 0.0 | 0.54 Other | | 0.09409 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 976000.0 ave 976000 max 976000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 976000 Ave neighs/atom = 122.00000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -57995.955 -57995.955 -58274.589 -58274.589 269.48364 269.48364 45217.862 45217.862 -2570.8057 -2570.8057 2000 -58024.898 -58024.898 -58295.452 -58295.452 261.67004 261.67004 45186.419 45186.419 191.61333 191.61333 Loop time of 123.784 on 1 procs for 1000 steps with 8000 atoms Performance: 0.698 ns/day, 34.384 hours/ns, 8.079 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.93 | 122.93 | 122.93 | 0.0 | 99.31 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.088341 | 0.088341 | 0.088341 | 0.0 | 0.07 Output | 0.0001806 | 0.0001806 | 0.0001806 | 0.0 | 0.00 Modify | 0.67516 | 0.67516 | 0.67516 | 0.0 | 0.55 Other | | 0.09164 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8869.00 ave 8869 max 8869 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 922556.0 ave 922556 max 922556 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 922556 Ave neighs/atom = 115.31950 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -58024.898 -58024.898 -58295.452 -58295.452 261.67004 261.67004 45186.419 45186.419 191.61333 191.61333 3000 -58013.132 -58013.132 -58299.939 -58299.939 277.38839 277.38839 45174.036 45174.036 551.26198 551.26198 Loop time of 123.457 on 1 procs for 1000 steps with 8000 atoms Performance: 0.700 ns/day, 34.294 hours/ns, 8.100 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.55 | 122.55 | 122.55 | 0.0 | 99.26 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10327 | 0.10327 | 0.10327 | 0.0 | 0.08 Output | 0.00016181 | 0.00016181 | 0.00016181 | 0.0 | 0.00 Modify | 0.69592 | 0.69592 | 0.69592 | 0.0 | 0.56 Other | | 0.1114 | | | 0.09 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8844.00 ave 8844 max 8844 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 925254.0 ave 925254 max 925254 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 925254 Ave neighs/atom = 115.65675 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -58013.132 -58013.132 -58299.939 -58299.939 277.38839 277.38839 45174.036 45174.036 551.26198 551.26198 4000 -58015.323 -58015.323 -58301.126 -58301.126 276.41734 276.41734 45206.554 45206.554 -1984.8898 -1984.8898 Loop time of 124.07 on 1 procs for 1000 steps with 8000 atoms Performance: 0.696 ns/day, 34.464 hours/ns, 8.060 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.22 | 123.22 | 123.22 | 0.0 | 99.31 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.088132 | 0.088132 | 0.088132 | 0.0 | 0.07 Output | 0.00016648 | 0.00016648 | 0.00016648 | 0.0 | 0.00 Modify | 0.67485 | 0.67485 | 0.67485 | 0.0 | 0.54 Other | | 0.09113 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8857.00 ave 8857 max 8857 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 925286.0 ave 925286 max 925286 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 925286 Ave neighs/atom = 115.66075 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -58015.323 -58015.323 -58301.126 -58301.126 276.41734 276.41734 45206.554 45206.554 -1984.8898 -1984.8898 5000 -58019.901 -58019.901 -58302.694 -58302.694 273.50673 273.50673 45166.283 45166.283 1911.5634 1911.5634 Loop time of 124.077 on 1 procs for 1000 steps with 8000 atoms Performance: 0.696 ns/day, 34.466 hours/ns, 8.059 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.22 | 123.22 | 123.22 | 0.0 | 99.31 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.088452 | 0.088452 | 0.088452 | 0.0 | 0.07 Output | 0.00014104 | 0.00014104 | 0.00014104 | 0.0 | 0.00 Modify | 0.6778 | 0.6778 | 0.6778 | 0.0 | 0.55 Other | | 0.09237 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8852.00 ave 8852 max 8852 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 925016.0 ave 925016 max 925016 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 925016 Ave neighs/atom = 115.62700 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.680003822883, Press = -966.248825494033 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -58019.901 -58019.901 -58302.694 -58302.694 273.50673 273.50673 45166.283 45166.283 1911.5634 1911.5634 6000 -58010.973 -58010.973 -58302.355 -58302.355 281.81426 281.81426 45185.843 45185.843 906.64779 906.64779 Loop time of 124.14 on 1 procs for 1000 steps with 8000 atoms Performance: 0.696 ns/day, 34.483 hours/ns, 8.055 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.27 | 123.27 | 123.27 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.087981 | 0.087981 | 0.087981 | 0.0 | 0.07 Output | 0.00014965 | 0.00014965 | 0.00014965 | 0.0 | 0.00 Modify | 0.68994 | 0.68994 | 0.68994 | 0.0 | 0.56 Other | | 0.09145 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8817.00 ave 8817 max 8817 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 926174.0 ave 926174 max 926174 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 926174 Ave neighs/atom = 115.77175 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.814498846894, Press = 62.7254265132322 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -58010.973 -58010.973 -58302.355 -58302.355 281.81426 281.81426 45185.843 45185.843 906.64779 906.64779 7000 -58021.213 -58021.213 -58296.29 -58296.29 266.04434 266.04434 45207.89 45207.89 -2385.2855 -2385.2855 Loop time of 124.155 on 1 procs for 1000 steps with 8000 atoms Performance: 0.696 ns/day, 34.488 hours/ns, 8.054 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.29 | 123.29 | 123.29 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.087306 | 0.087306 | 0.087306 | 0.0 | 0.07 Output | 0.00013112 | 0.00013112 | 0.00013112 | 0.0 | 0.00 Modify | 0.68914 | 0.68914 | 0.68914 | 0.0 | 0.56 Other | | 0.09059 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8827.00 ave 8827 max 8827 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 926594.0 ave 926594 max 926594 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 926594 Ave neighs/atom = 115.82425 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.988877491509, Press = -46.58539873222 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -58021.213 -58021.213 -58296.29 -58296.29 266.04434 266.04434 45207.89 45207.89 -2385.2855 -2385.2855 8000 -58012.55 -58012.55 -58310.256 -58310.256 287.93043 287.93043 45172.399 45172.399 2316.0592 2316.0592 Loop time of 123.952 on 1 procs for 1000 steps with 8000 atoms Performance: 0.697 ns/day, 34.431 hours/ns, 8.068 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.06 | 123.06 | 123.06 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.091967 | 0.091967 | 0.091967 | 0.0 | 0.07 Output | 0.00014109 | 0.00014109 | 0.00014109 | 0.0 | 0.00 Modify | 0.70393 | 0.70393 | 0.70393 | 0.0 | 0.57 Other | | 0.09808 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8855.00 ave 8855 max 8855 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 923502.0 ave 923502 max 923502 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 923502 Ave neighs/atom = 115.43775 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.123877288382, Press = -13.8833096148083 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -58012.55 -58012.55 -58310.256 -58310.256 287.93043 287.93043 45172.399 45172.399 2316.0592 2316.0592 9000 -58017.672 -58017.672 -58293.841 -58293.841 267.1001 267.1001 45202.688 45202.688 -2019.2653 -2019.2653 Loop time of 124.342 on 1 procs for 1000 steps with 8000 atoms Performance: 0.695 ns/day, 34.540 hours/ns, 8.042 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.47 | 123.47 | 123.47 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.088528 | 0.088528 | 0.088528 | 0.0 | 0.07 Output | 0.00012944 | 0.00012944 | 0.00012944 | 0.0 | 0.00 Modify | 0.68855 | 0.68855 | 0.68855 | 0.0 | 0.55 Other | | 0.09158 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8814.00 ave 8814 max 8814 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 928374.0 ave 928374 max 928374 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 928374 Ave neighs/atom = 116.04675 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.031328538204, Press = -7.85592913180427 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -58017.672 -58017.672 -58293.841 -58293.841 267.1001 267.1001 45202.688 45202.688 -2019.2653 -2019.2653 10000 -58018.725 -58018.725 -58300.153 -58300.153 272.18671 272.18671 45185.536 45185.536 616.25209 616.25209 Loop time of 123.799 on 1 procs for 1000 steps with 8000 atoms Performance: 0.698 ns/day, 34.389 hours/ns, 8.078 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.93 | 122.93 | 122.93 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.088242 | 0.088242 | 0.088242 | 0.0 | 0.07 Output | 0.00014451 | 0.00014451 | 0.00014451 | 0.0 | 0.00 Modify | 0.6906 | 0.6906 | 0.6906 | 0.0 | 0.56 Other | | 0.09106 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8822.00 ave 8822 max 8822 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 923276.0 ave 923276 max 923276 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 923276 Ave neighs/atom = 115.40950 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.124222749104, Press = -21.6940219099933 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -58018.725 -58018.725 -58300.153 -58300.153 272.18671 272.18671 45185.536 45185.536 616.25209 616.25209 11000 -58012.037 -58012.037 -58294.207 -58294.207 272.90445 272.90445 45158.897 45158.897 2840.7848 2840.7848 Loop time of 124.223 on 1 procs for 1000 steps with 8000 atoms Performance: 0.696 ns/day, 34.506 hours/ns, 8.050 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.34 | 123.34 | 123.34 | 0.0 | 99.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.089282 | 0.089282 | 0.089282 | 0.0 | 0.07 Output | 0.00012942 | 0.00012942 | 0.00012942 | 0.0 | 0.00 Modify | 0.69809 | 0.69809 | 0.69809 | 0.0 | 0.56 Other | | 0.09577 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8774.00 ave 8774 max 8774 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 926504.0 ave 926504 max 926504 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 926504 Ave neighs/atom = 115.81300 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.026681770862, Press = 4.55627732193511 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -58012.037 -58012.037 -58294.207 -58294.207 272.90445 272.90445 45158.897 45158.897 2840.7848 2840.7848 12000 -58018.671 -58018.671 -58300.332 -58300.332 272.41146 272.41146 45245.032 45245.032 -5892.22 -5892.22 Loop time of 124.04 on 1 procs for 1000 steps with 8000 atoms Performance: 0.697 ns/day, 34.456 hours/ns, 8.062 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.17 | 123.17 | 123.17 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.088661 | 0.088661 | 0.088661 | 0.0 | 0.07 Output | 0.00014019 | 0.00014019 | 0.00014019 | 0.0 | 0.00 Modify | 0.68859 | 0.68859 | 0.68859 | 0.0 | 0.56 Other | | 0.09082 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8873.00 ave 8873 max 8873 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 925906.0 ave 925906 max 925906 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 925906 Ave neighs/atom = 115.73825 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.982067097091, Press = -9.92784052225026 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -58018.671 -58018.671 -58300.332 -58300.332 272.41146 272.41146 45245.032 45245.032 -5892.22 -5892.22 13000 -58012.946 -58012.946 -58299.304 -58299.304 276.95493 276.95493 45174.268 45174.268 1384.9688 1384.9688 Loop time of 120.845 on 1 procs for 1000 steps with 8000 atoms Performance: 0.715 ns/day, 33.568 hours/ns, 8.275 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 120 | 120 | 120 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.086123 | 0.086123 | 0.086123 | 0.0 | 0.07 Output | 0.0001235 | 0.0001235 | 0.0001235 | 0.0 | 0.00 Modify | 0.67423 | 0.67423 | 0.67423 | 0.0 | 0.56 Other | | 0.0885 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8823.00 ave 8823 max 8823 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 923034.0 ave 923034 max 923034 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 923034 Ave neighs/atom = 115.37925 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.901099839127, Press = -9.14765422325527 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -58012.946 -58012.946 -58299.304 -58299.304 276.95493 276.95493 45174.268 45174.268 1384.9688 1384.9688 14000 -58026.327 -58026.327 -58310.961 -58310.961 275.28775 275.28775 45182.767 45182.767 255.4779 255.4779 Loop time of 114.443 on 1 procs for 1000 steps with 8000 atoms Performance: 0.755 ns/day, 31.790 hours/ns, 8.738 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.64 | 113.64 | 113.64 | 0.0 | 99.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.08328 | 0.08328 | 0.08328 | 0.0 | 0.07 Output | 0.00012295 | 0.00012295 | 0.00012295 | 0.0 | 0.00 Modify | 0.63967 | 0.63967 | 0.63967 | 0.0 | 0.56 Other | | 0.08458 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8823.00 ave 8823 max 8823 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 926428.0 ave 926428 max 926428 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 926428 Ave neighs/atom = 115.80350 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.827807535886, Press = -2.36346126308669 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -58026.327 -58026.327 -58310.961 -58310.961 275.28775 275.28775 45182.767 45182.767 255.4779 255.4779 15000 -58014.748 -58014.748 -58296.022 -58296.022 272.03759 272.03759 45198.996 45198.996 -1361.1515 -1361.1515 Loop time of 119.147 on 1 procs for 1000 steps with 8000 atoms Performance: 0.725 ns/day, 33.096 hours/ns, 8.393 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 118.3 | 118.3 | 118.3 | 0.0 | 99.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.086177 | 0.086177 | 0.086177 | 0.0 | 0.07 Output | 0.00014165 | 0.00014165 | 0.00014165 | 0.0 | 0.00 Modify | 0.67029 | 0.67029 | 0.67029 | 0.0 | 0.56 Other | | 0.09508 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8810.00 ave 8810 max 8810 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 927476.0 ave 927476 max 927476 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 927476 Ave neighs/atom = 115.93450 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.815900507658, Press = -8.42162702114281 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -58014.748 -58014.748 -58296.022 -58296.022 272.03759 272.03759 45198.996 45198.996 -1361.1515 -1361.1515 16000 -58015.909 -58015.909 -58301.379 -58301.379 276.09641 276.09641 45156.845 45156.845 3245.0329 3245.0329 Loop time of 114.401 on 1 procs for 1000 steps with 8000 atoms Performance: 0.755 ns/day, 31.778 hours/ns, 8.741 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.56 | 113.56 | 113.56 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.089804 | 0.089804 | 0.089804 | 0.0 | 0.08 Output | 0.0001371 | 0.0001371 | 0.0001371 | 0.0 | 0.00 Modify | 0.65592 | 0.65592 | 0.65592 | 0.0 | 0.57 Other | | 0.09383 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8821.00 ave 8821 max 8821 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 924466.0 ave 924466 max 924466 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 924466 Ave neighs/atom = 115.55825 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.818609108511, Press = -3.6916590316108 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -58015.909 -58015.909 -58301.379 -58301.379 276.09641 276.09641 45156.845 45156.845 3245.0329 3245.0329 17000 -58016.796 -58016.796 -58296.833 -58296.833 270.84134 270.84134 45223.663 45223.663 -4040.203 -4040.203 Loop time of 111.667 on 1 procs for 1000 steps with 8000 atoms Performance: 0.774 ns/day, 31.018 hours/ns, 8.955 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 110.85 | 110.85 | 110.85 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.087368 | 0.087368 | 0.087368 | 0.0 | 0.08 Output | 0.00015187 | 0.00015187 | 0.00015187 | 0.0 | 0.00 Modify | 0.63767 | 0.63767 | 0.63767 | 0.0 | 0.57 Other | | 0.09031 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8813.00 ave 8813 max 8813 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 926698.0 ave 926698 max 926698 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 926698 Ave neighs/atom = 115.83725 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.851693731607, Press = 0.278761983929108 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -58016.796 -58016.796 -58296.833 -58296.833 270.84134 270.84134 45223.663 45223.663 -4040.203 -4040.203 18000 -58015.766 -58015.766 -58305.404 -58305.404 280.12719 280.12719 45183.174 45183.174 643.61125 643.61125 Loop time of 114.199 on 1 procs for 1000 steps with 8000 atoms Performance: 0.757 ns/day, 31.722 hours/ns, 8.757 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.36 | 113.36 | 113.36 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.090098 | 0.090098 | 0.090098 | 0.0 | 0.08 Output | 0.00013008 | 0.00013008 | 0.00013008 | 0.0 | 0.00 Modify | 0.6545 | 0.6545 | 0.6545 | 0.0 | 0.57 Other | | 0.09463 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8862.00 ave 8862 max 8862 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 923010.0 ave 923010 max 923010 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 923010 Ave neighs/atom = 115.37625 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.849710936387, Press = -8.57306063132975 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -58015.766 -58015.766 -58305.404 -58305.404 280.12719 280.12719 45183.174 45183.174 643.61125 643.61125 19000 -58020.401 -58020.401 -58301.996 -58301.996 272.34852 272.34852 45175.685 45175.685 833.73514 833.73514 Loop time of 114.131 on 1 procs for 1000 steps with 8000 atoms Performance: 0.757 ns/day, 31.703 hours/ns, 8.762 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.29 | 113.29 | 113.29 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.090088 | 0.090088 | 0.090088 | 0.0 | 0.08 Output | 0.00013898 | 0.00013898 | 0.00013898 | 0.0 | 0.00 Modify | 0.65473 | 0.65473 | 0.65473 | 0.0 | 0.57 Other | | 0.09368 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8834.00 ave 8834 max 8834 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 927068.0 ave 927068 max 927068 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 927068 Ave neighs/atom = 115.88350 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.856244544938, Press = -0.336987120964687 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -58020.401 -58020.401 -58301.996 -58301.996 272.34852 272.34852 45175.685 45175.685 833.73514 833.73514 20000 -58013.864 -58013.864 -58301.422 -58301.422 278.11611 278.11611 45209.988 45209.988 -2086.865 -2086.865 Loop time of 109.852 on 1 procs for 1000 steps with 8000 atoms Performance: 0.787 ns/day, 30.514 hours/ns, 9.103 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 109.05 | 109.05 | 109.05 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.08604 | 0.08604 | 0.08604 | 0.0 | 0.08 Output | 0.00022767 | 0.00022767 | 0.00022767 | 0.0 | 0.00 Modify | 0.62918 | 0.62918 | 0.62918 | 0.0 | 0.57 Other | | 0.08841 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8774.00 ave 8774 max 8774 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 926234.0 ave 926234 max 926234 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 926234 Ave neighs/atom = 115.77925 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.926109802268, Press = -4.6262022863025 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -58013.864 -58013.864 -58301.422 -58301.422 278.11611 278.11611 45209.988 45209.988 -2086.865 -2086.865 21000 -58018.312 -58018.312 -58299.513 -58299.513 271.96706 271.96706 45163 45163 2579.8918 2579.8918 Loop time of 115.531 on 1 procs for 1000 steps with 8000 atoms Performance: 0.748 ns/day, 32.092 hours/ns, 8.656 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.68 | 114.68 | 114.68 | 0.0 | 99.26 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.092087 | 0.092087 | 0.092087 | 0.0 | 0.08 Output | 0.00012717 | 0.00012717 | 0.00012717 | 0.0 | 0.00 Modify | 0.66515 | 0.66515 | 0.66515 | 0.0 | 0.58 Other | | 0.09835 | | | 0.09 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8802.00 ave 8802 max 8802 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 925172.0 ave 925172 max 925172 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 925172 Ave neighs/atom = 115.64650 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.92959742768, Press = -4.40792666757171 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -58018.312 -58018.312 -58299.513 -58299.513 271.96706 271.96706 45163 45163 2579.8918 2579.8918 22000 -58019.373 -58019.373 -58302.914 -58302.914 274.23125 274.23125 45203.609 45203.609 -1764.5217 -1764.5217 Loop time of 107.81 on 1 procs for 1000 steps with 8000 atoms Performance: 0.801 ns/day, 29.947 hours/ns, 9.276 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 107.03 | 107.03 | 107.03 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.085515 | 0.085515 | 0.085515 | 0.0 | 0.08 Output | 0.00013225 | 0.00013225 | 0.00013225 | 0.0 | 0.00 Modify | 0.61357 | 0.61357 | 0.61357 | 0.0 | 0.57 Other | | 0.08446 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8855.00 ave 8855 max 8855 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 926622.0 ave 926622 max 926622 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 926622 Ave neighs/atom = 115.82775 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.956333205754, Press = 1.37821687673927 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -58019.373 -58019.373 -58302.914 -58302.914 274.23125 274.23125 45203.609 45203.609 -1764.5217 -1764.5217 23000 -58014.276 -58014.276 -58297.831 -58297.831 274.24362 274.24362 45201.799 45201.799 -1576.1564 -1576.1564 Loop time of 110.254 on 1 procs for 1000 steps with 8000 atoms Performance: 0.784 ns/day, 30.626 hours/ns, 9.070 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 109.45 | 109.45 | 109.45 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.086984 | 0.086984 | 0.086984 | 0.0 | 0.08 Output | 0.0001431 | 0.0001431 | 0.0001431 | 0.0 | 0.00 Modify | 0.62967 | 0.62967 | 0.62967 | 0.0 | 0.57 Other | | 0.08699 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8781.00 ave 8781 max 8781 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 925292.0 ave 925292 max 925292 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 925292 Ave neighs/atom = 115.66150 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.98758995648, Press = -8.1537556971227 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.3 ghost atom cutoff = 5.3 binsize = 2.65, bins = 14 14 14 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.300000000000001 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 12.72 | 12.72 | 12.72 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -58014.276 -58014.276 -58297.831 -58297.831 274.24362 274.24362 45201.799 45201.799 -1576.1564 -1576.1564 24000 -58013.063 -58013.063 -58297.583 -58297.583 275.17762 275.17762 45164.203 45164.203 2531.2307 2531.2307 Loop time of 111.925 on 1 procs for 1000 steps with 8000 atoms Performance: 0.772 ns/day, 31.090 hours/ns, 8.935 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 111.11 | 111.11 | 111.11 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.087939 | 0.087939 | 0.087939 | 0.0 | 0.08 Output | 0.00013605 | 0.00013605 | 0.00013605 | 0.0 | 0.00 Modify | 0.63908 | 0.63908 | 0.63908 | 0.0 | 0.57 Other | | 0.09084 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8862.00 ave 8862 max 8862 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 924832.0 ave 924832 max 924832 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 924832 Ave neighs/atom = 115.60400 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T273.15.out" else "print 'not_converged' file output/vol_T273.15.out" print '${V}' file output/vol_T273.15.out 45187.8286090207 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0