# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.5612920299172397*${_u_distance} variable latticeconst_converted equal 3.5612920299172397*1 lattice diamond ${latticeconst_converted} lattice diamond 3.56129202991724 Lattice spacing in x,y,z = 3.5612920 3.5612920 3.5612920 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (35.612920 35.612920 35.612920) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (35.612920 35.612920 35.612920) create_atoms CPU = 0.003 seconds variable mass_converted equal 12.0107*${_u_mass} variable mass_converted equal 12.0107*1 kim_interactions C WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions C #=== BEGIN kim interactions ================================== pair_style kim EDIP_LAMMPS_JiangMorganSzlufarska_2012_SiC__MO_667792548433_000 pair_coeff * * C #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 12.0107 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 45167.1578417994 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 45167.1578417994/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 45167.1578417994/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 45167.1578417994/(1*1*${_u_distance}) variable V0_metal equal 45167.1578417994/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 45167.1578417994*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 45167.1578417994 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_667792548433_000#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.652 | 8.652 | 8.652 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -58670.73 -58670.73 -58994.512 -58994.512 313.15 313.15 45167.158 45167.158 7656.7949 7656.7949 1000 -58312.001 -58312.001 -58635.945 -58635.945 313.30697 313.30697 45374.755 45374.755 -2321.2822 -2321.2822 Loop time of 44.9071 on 1 procs for 1000 steps with 8000 atoms Performance: 1.924 ns/day, 12.474 hours/ns, 22.268 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.057 | 44.057 | 44.057 | 0.0 | 98.11 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.086408 | 0.086408 | 0.086408 | 0.0 | 0.19 Output | 0.00034427 | 0.00034427 | 0.00034427 | 0.0 | 0.00 Modify | 0.66686 | 0.66686 | 0.66686 | 0.0 | 1.48 Other | | 0.09676 | | | 0.22 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688000.0 ave 688000 max 688000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688000 Ave neighs/atom = 86.000000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -58312.001 -58312.001 -58635.945 -58635.945 313.30697 313.30697 45374.755 45374.755 -2321.2822 -2321.2822 2000 -58346.771 -58346.771 -58663.412 -58663.412 306.24342 306.24342 45342.141 45342.141 -178.31654 -178.31654 Loop time of 48.6192 on 1 procs for 1000 steps with 8000 atoms Performance: 1.777 ns/day, 13.505 hours/ns, 20.568 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.706 | 47.706 | 47.706 | 0.0 | 98.12 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.092383 | 0.092383 | 0.092383 | 0.0 | 0.19 Output | 0.0002651 | 0.0002651 | 0.0002651 | 0.0 | 0.00 Modify | 0.7184 | 0.7184 | 0.7184 | 0.0 | 1.48 Other | | 0.1024 | | | 0.21 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688366.0 ave 688366 max 688366 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688366 Ave neighs/atom = 86.045750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -58346.771 -58346.771 -58663.412 -58663.412 306.24342 306.24342 45342.141 45342.141 -178.31654 -178.31654 3000 -58330.292 -58330.292 -58655.675 -58655.675 314.69919 314.69919 45324.884 45324.884 1865.8351 1865.8351 Loop time of 40.1865 on 1 procs for 1000 steps with 8000 atoms Performance: 2.150 ns/day, 11.163 hours/ns, 24.884 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.438 | 39.438 | 39.438 | 0.0 | 98.14 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077054 | 0.077054 | 0.077054 | 0.0 | 0.19 Output | 0.00018545 | 0.00018545 | 0.00018545 | 0.0 | 0.00 Modify | 0.59004 | 0.59004 | 0.59004 | 0.0 | 1.47 Other | | 0.08103 | | | 0.20 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688292.0 ave 688292 max 688292 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688292 Ave neighs/atom = 86.036500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -58330.292 -58330.292 -58655.675 -58655.675 314.69919 314.69919 45324.884 45324.884 1865.8351 1865.8351 4000 -58336.936 -58336.936 -58668.185 -58668.185 320.37235 320.37235 45364.934 45364.934 -2228.5832 -2228.5832 Loop time of 39.3804 on 1 procs for 1000 steps with 8000 atoms Performance: 2.194 ns/day, 10.939 hours/ns, 25.393 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.646 | 38.646 | 38.646 | 0.0 | 98.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.075759 | 0.075759 | 0.075759 | 0.0 | 0.19 Output | 0.00016475 | 0.00016475 | 0.00016475 | 0.0 | 0.00 Modify | 0.57986 | 0.57986 | 0.57986 | 0.0 | 1.47 Other | | 0.07898 | | | 0.20 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688338.0 ave 688338 max 688338 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688338 Ave neighs/atom = 86.042250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -58336.936 -58336.936 -58668.185 -58668.185 320.37235 320.37235 45364.934 45364.934 -2228.5832 -2228.5832 5000 -58338.335 -58338.335 -58666.349 -58666.349 317.24305 317.24305 45325.356 45325.356 1536.6055 1536.6055 Loop time of 43.0575 on 1 procs for 1000 steps with 8000 atoms Performance: 2.007 ns/day, 11.960 hours/ns, 23.225 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.251 | 42.251 | 42.251 | 0.0 | 98.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.082296 | 0.082296 | 0.082296 | 0.0 | 0.19 Output | 0.00013128 | 0.00013128 | 0.00013128 | 0.0 | 0.00 Modify | 0.63458 | 0.63458 | 0.63458 | 0.0 | 1.47 Other | | 0.08898 | | | 0.21 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688232.0 ave 688232 max 688232 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688232 Ave neighs/atom = 86.029000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.499447326782, Press = 759.344273540575 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -58338.335 -58338.335 -58666.349 -58666.349 317.24305 317.24305 45325.356 45325.356 1536.6055 1536.6055 6000 -58331.043 -58331.043 -58657.487 -58657.487 315.72411 315.72411 45330.022 45330.022 1337.7722 1337.7722 Loop time of 40.1216 on 1 procs for 1000 steps with 8000 atoms Performance: 2.153 ns/day, 11.145 hours/ns, 24.924 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.358 | 39.358 | 39.358 | 0.0 | 98.10 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077669 | 0.077669 | 0.077669 | 0.0 | 0.19 Output | 0.00014718 | 0.00014718 | 0.00014718 | 0.0 | 0.00 Modify | 0.60372 | 0.60372 | 0.60372 | 0.0 | 1.50 Other | | 0.08182 | | | 0.20 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688288.0 ave 688288 max 688288 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688288 Ave neighs/atom = 86.036000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.679521145186, Press = -91.8978744508235 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -58331.043 -58331.043 -58657.487 -58657.487 315.72411 315.72411 45330.022 45330.022 1337.7722 1337.7722 7000 -58341.519 -58341.519 -58666.1 -58666.1 313.92278 313.92278 45375.842 45375.842 -3390.6689 -3390.6689 Loop time of 43.5655 on 1 procs for 1000 steps with 8000 atoms Performance: 1.983 ns/day, 12.102 hours/ns, 22.954 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.733 | 42.733 | 42.733 | 0.0 | 98.09 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.084333 | 0.084333 | 0.084333 | 0.0 | 0.19 Output | 0.00012802 | 0.00012802 | 0.00012802 | 0.0 | 0.00 Modify | 0.65881 | 0.65881 | 0.65881 | 0.0 | 1.51 Other | | 0.08968 | | | 0.21 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688326.0 ave 688326 max 688326 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688326 Ave neighs/atom = 86.040750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.046936525411, Press = 22.5580478138264 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -58341.519 -58341.519 -58666.1 -58666.1 313.92278 313.92278 45375.842 45375.842 -3390.6689 -3390.6689 8000 -58330.424 -58330.424 -58658.734 -58658.734 317.52934 317.52934 45328.799 45328.799 1574.8803 1574.8803 Loop time of 38.0663 on 1 procs for 1000 steps with 8000 atoms Performance: 2.270 ns/day, 10.574 hours/ns, 26.270 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.35 | 37.35 | 37.35 | 0.0 | 98.12 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.072988 | 0.072988 | 0.072988 | 0.0 | 0.19 Output | 0.00012984 | 0.00012984 | 0.00012984 | 0.0 | 0.00 Modify | 0.56836 | 0.56836 | 0.56836 | 0.0 | 1.49 Other | | 0.07458 | | | 0.20 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688308.0 ave 688308 max 688308 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688308 Ave neighs/atom = 86.038500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.071665652934, Press = 10.6010858042898 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -58330.424 -58330.424 -58658.734 -58658.734 317.52934 317.52934 45328.799 45328.799 1574.8803 1574.8803 9000 -58339.705 -58339.705 -58662.263 -58662.263 311.96593 311.96593 45343.866 45343.866 -177.08824 -177.08824 Loop time of 36.6641 on 1 procs for 1000 steps with 8000 atoms Performance: 2.357 ns/day, 10.184 hours/ns, 27.275 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.975 | 35.975 | 35.975 | 0.0 | 98.12 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070666 | 0.070666 | 0.070666 | 0.0 | 0.19 Output | 0.00012865 | 0.00012865 | 0.00012865 | 0.0 | 0.00 Modify | 0.54786 | 0.54786 | 0.54786 | 0.0 | 1.49 Other | | 0.07004 | | | 0.19 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688330.0 ave 688330 max 688330 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688330 Ave neighs/atom = 86.041250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.038245499053, Press = -5.88714435918054 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -58339.705 -58339.705 -58662.263 -58662.263 311.96593 311.96593 45343.866 45343.866 -177.08824 -177.08824 10000 -58335.285 -58335.285 -58662.525 -58662.525 316.49439 316.49439 45357.285 45357.285 -1454.4021 -1454.4021 Loop time of 36.5891 on 1 procs for 1000 steps with 8000 atoms Performance: 2.361 ns/day, 10.164 hours/ns, 27.331 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.904 | 35.904 | 35.904 | 0.0 | 98.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.069996 | 0.069996 | 0.069996 | 0.0 | 0.19 Output | 0.00012561 | 0.00012561 | 0.00012561 | 0.0 | 0.00 Modify | 0.54488 | 0.54488 | 0.54488 | 0.0 | 1.49 Other | | 0.06984 | | | 0.19 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688290.0 ave 688290 max 688290 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688290 Ave neighs/atom = 86.036250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.136400642218, Press = 7.50277089471571 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -58335.285 -58335.285 -58662.525 -58662.525 316.49439 316.49439 45357.285 45357.285 -1454.4021 -1454.4021 11000 -58330.47 -58330.47 -58658.591 -58658.591 317.34649 317.34649 45309.617 45309.617 3378.3297 3378.3297 Loop time of 36.6392 on 1 procs for 1000 steps with 8000 atoms Performance: 2.358 ns/day, 10.178 hours/ns, 27.293 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.954 | 35.954 | 35.954 | 0.0 | 98.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070364 | 0.070364 | 0.070364 | 0.0 | 0.19 Output | 9.1563e-05 | 9.1563e-05 | 9.1563e-05 | 0.0 | 0.00 Modify | 0.54481 | 0.54481 | 0.54481 | 0.0 | 1.49 Other | | 0.06984 | | | 0.19 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688274.0 ave 688274 max 688274 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688274 Ave neighs/atom = 86.034250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.084947488532, Press = 5.41127829441266 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -58330.47 -58330.47 -58658.591 -58658.591 317.34649 317.34649 45309.617 45309.617 3378.3297 3378.3297 12000 -58337.06 -58337.06 -58660.272 -58660.272 312.59871 312.59871 45372.74 45372.74 -2986.3122 -2986.3122 Loop time of 36.8506 on 1 procs for 1000 steps with 8000 atoms Performance: 2.345 ns/day, 10.236 hours/ns, 27.137 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 36.154 | 36.154 | 36.154 | 0.0 | 98.11 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.071058 | 0.071058 | 0.071058 | 0.0 | 0.19 Output | 0.00013328 | 0.00013328 | 0.00013328 | 0.0 | 0.00 Modify | 0.5518 | 0.5518 | 0.5518 | 0.0 | 1.50 Other | | 0.07381 | | | 0.20 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688368.0 ave 688368 max 688368 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688368 Ave neighs/atom = 86.046000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.277338687803, Press = -14.0432106221769 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -58337.06 -58337.06 -58660.272 -58660.272 312.59871 312.59871 45372.74 45372.74 -2986.3122 -2986.3122 13000 -58328.611 -58328.611 -58655.907 -58655.907 316.54847 316.54847 45346.561 45346.561 -210.52922 -210.52922 Loop time of 38.8874 on 1 procs for 1000 steps with 8000 atoms Performance: 2.222 ns/day, 10.802 hours/ns, 25.715 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.111 | 38.111 | 38.111 | 0.0 | 98.00 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.079534 | 0.079534 | 0.079534 | 0.0 | 0.20 Output | 0.00013487 | 0.00013487 | 0.00013487 | 0.0 | 0.00 Modify | 0.60423 | 0.60423 | 0.60423 | 0.0 | 1.55 Other | | 0.09284 | | | 0.24 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688274.0 ave 688274 max 688274 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688274 Ave neighs/atom = 86.034250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.375770989008, Press = 6.54890154268269 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -58328.611 -58328.611 -58655.907 -58655.907 316.54847 316.54847 45346.561 45346.561 -210.52922 -210.52922 14000 -58338.939 -58338.939 -58666.777 -58666.777 317.07266 317.07266 45338.249 45338.249 417.89138 417.89138 Loop time of 36.6573 on 1 procs for 1000 steps with 8000 atoms Performance: 2.357 ns/day, 10.183 hours/ns, 27.280 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.97 | 35.97 | 35.97 | 0.0 | 98.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070339 | 0.070339 | 0.070339 | 0.0 | 0.19 Output | 9.8139e-05 | 9.8139e-05 | 9.8139e-05 | 0.0 | 0.00 Modify | 0.54575 | 0.54575 | 0.54575 | 0.0 | 1.49 Other | | 0.07091 | | | 0.19 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688316.0 ave 688316 max 688316 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688316 Ave neighs/atom = 86.039500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.40151246332, Press = -0.567861319739831 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -58338.939 -58338.939 -58666.777 -58666.777 317.07266 317.07266 45338.249 45338.249 417.89138 417.89138 15000 -58332.624 -58332.624 -58659.222 -58659.222 315.87308 315.87308 45353.434 45353.434 -980.02734 -980.02734 Loop time of 36.637 on 1 procs for 1000 steps with 8000 atoms Performance: 2.358 ns/day, 10.177 hours/ns, 27.295 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.951 | 35.951 | 35.951 | 0.0 | 98.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070197 | 0.070197 | 0.070197 | 0.0 | 0.19 Output | 9.1192e-05 | 9.1192e-05 | 9.1192e-05 | 0.0 | 0.00 Modify | 0.54556 | 0.54556 | 0.54556 | 0.0 | 1.49 Other | | 0.07035 | | | 0.19 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688264.0 ave 688264 max 688264 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688264 Ave neighs/atom = 86.033000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.359706266414, Press = 1.14588905779256 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -58332.624 -58332.624 -58659.222 -58659.222 315.87308 315.87308 45353.434 45353.434 -980.02734 -980.02734 16000 -58339.554 -58339.554 -58663.291 -58663.291 313.10625 313.10625 45328.869 45328.869 1374.976 1374.976 Loop time of 36.624 on 1 procs for 1000 steps with 8000 atoms Performance: 2.359 ns/day, 10.173 hours/ns, 27.304 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.938 | 35.938 | 35.938 | 0.0 | 98.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070081 | 0.070081 | 0.070081 | 0.0 | 0.19 Output | 9.1444e-05 | 9.1444e-05 | 9.1444e-05 | 0.0 | 0.00 Modify | 0.54597 | 0.54597 | 0.54597 | 0.0 | 1.49 Other | | 0.07002 | | | 0.19 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688344.0 ave 688344 max 688344 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688344 Ave neighs/atom = 86.043000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.19712765957, Press = 4.22936797718475 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -58339.554 -58339.554 -58663.291 -58663.291 313.10625 313.10625 45328.869 45328.869 1374.976 1374.976 17000 -58337.121 -58337.121 -58661.15 -58661.15 313.38854 313.38854 45346.051 45346.051 -382.82591 -382.82591 Loop time of 36.6598 on 1 procs for 1000 steps with 8000 atoms Performance: 2.357 ns/day, 10.183 hours/ns, 27.278 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.973 | 35.973 | 35.973 | 0.0 | 98.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070705 | 0.070705 | 0.070705 | 0.0 | 0.19 Output | 0.00013059 | 0.00013059 | 0.00013059 | 0.0 | 0.00 Modify | 0.54592 | 0.54592 | 0.54592 | 0.0 | 1.49 Other | | 0.06994 | | | 0.19 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688390.0 ave 688390 max 688390 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688390 Ave neighs/atom = 86.048750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.177495478387, Press = -6.21224015171846 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -58337.121 -58337.121 -58661.15 -58661.15 313.38854 313.38854 45346.051 45346.051 -382.82591 -382.82591 18000 -58339.95 -58339.95 -58662.23 -58662.23 311.69745 311.69745 45371.537 45371.537 -2797.4648 -2797.4648 Loop time of 36.6003 on 1 procs for 1000 steps with 8000 atoms Performance: 2.361 ns/day, 10.167 hours/ns, 27.322 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.916 | 35.916 | 35.916 | 0.0 | 98.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070649 | 0.070649 | 0.070649 | 0.0 | 0.19 Output | 9.1077e-05 | 9.1077e-05 | 9.1077e-05 | 0.0 | 0.00 Modify | 0.54393 | 0.54393 | 0.54393 | 0.0 | 1.49 Other | | 0.06992 | | | 0.19 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688342.0 ave 688342 max 688342 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688342 Ave neighs/atom = 86.042750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.054998852123, Press = 5.69779129349363 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -58339.95 -58339.95 -58662.23 -58662.23 311.69745 311.69745 45371.537 45371.537 -2797.4648 -2797.4648 19000 -58339.974 -58339.974 -58659.769 -58659.769 309.29399 309.29399 45314.141 45314.141 2712.8278 2712.8278 Loop time of 36.5637 on 1 procs for 1000 steps with 8000 atoms Performance: 2.363 ns/day, 10.157 hours/ns, 27.350 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.88 | 35.88 | 35.88 | 0.0 | 98.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070029 | 0.070029 | 0.070029 | 0.0 | 0.19 Output | 9.2169e-05 | 9.2169e-05 | 9.2169e-05 | 0.0 | 0.00 Modify | 0.54395 | 0.54395 | 0.54395 | 0.0 | 1.49 Other | | 0.06966 | | | 0.19 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688292.0 ave 688292 max 688292 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688292 Ave neighs/atom = 86.036500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.074554909258, Press = 1.74261438698338 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -58339.974 -58339.974 -58659.769 -58659.769 309.29399 309.29399 45314.141 45314.141 2712.8278 2712.8278 20000 -58331.712 -58331.712 -58657.098 -58657.098 314.70092 314.70092 45350.969 45350.969 -761.85173 -761.85173 Loop time of 36.6146 on 1 procs for 1000 steps with 8000 atoms Performance: 2.360 ns/day, 10.171 hours/ns, 27.312 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.929 | 35.929 | 35.929 | 0.0 | 98.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070398 | 0.070398 | 0.070398 | 0.0 | 0.19 Output | 0.00012419 | 0.00012419 | 0.00012419 | 0.0 | 0.00 Modify | 0.54536 | 0.54536 | 0.54536 | 0.0 | 1.49 Other | | 0.0697 | | | 0.19 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688338.0 ave 688338 max 688338 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688338 Ave neighs/atom = 86.042250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.031751977825, Press = -0.603610918627717 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -58331.712 -58331.712 -58657.098 -58657.098 314.70092 314.70092 45350.969 45350.969 -761.85173 -761.85173 21000 -58340.147 -58340.147 -58664.121 -58664.121 313.33555 313.33555 45340.115 45340.115 193.22137 193.22137 Loop time of 36.5963 on 1 procs for 1000 steps with 8000 atoms Performance: 2.361 ns/day, 10.166 hours/ns, 27.325 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.912 | 35.912 | 35.912 | 0.0 | 98.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070033 | 0.070033 | 0.070033 | 0.0 | 0.19 Output | 9.1316e-05 | 9.1316e-05 | 9.1316e-05 | 0.0 | 0.00 Modify | 0.54501 | 0.54501 | 0.54501 | 0.0 | 1.49 Other | | 0.06942 | | | 0.19 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688302.0 ave 688302 max 688302 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688302 Ave neighs/atom = 86.037750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.999153233619, Press = 2.09579371790196 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -58340.147 -58340.147 -58664.121 -58664.121 313.33555 313.33555 45340.115 45340.115 193.22137 193.22137 22000 -58335.612 -58335.612 -58659.534 -58659.534 313.28493 313.28493 45335.893 45335.893 793.21509 793.21509 Loop time of 36.5759 on 1 procs for 1000 steps with 8000 atoms Performance: 2.362 ns/day, 10.160 hours/ns, 27.340 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.891 | 35.891 | 35.891 | 0.0 | 98.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070527 | 0.070527 | 0.070527 | 0.0 | 0.19 Output | 9.0622e-05 | 9.0622e-05 | 9.0622e-05 | 0.0 | 0.00 Modify | 0.54438 | 0.54438 | 0.54438 | 0.0 | 1.49 Other | | 0.06948 | | | 0.19 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688278.0 ave 688278 max 688278 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688278 Ave neighs/atom = 86.034750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.025059600405, Press = -0.569210053012973 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.941586 ghost atom cutoff = 4.941586 binsize = 2.470793, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.941586 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.904 | 8.904 | 8.904 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -58335.612 -58335.612 -58659.534 -58659.534 313.28493 313.28493 45335.893 45335.893 793.21509 793.21509 23000 -58337.792 -58337.792 -58661.854 -58661.854 313.4209 313.4209 45360.979 45360.979 -1985.4402 -1985.4402 Loop time of 36.5548 on 1 procs for 1000 steps with 8000 atoms Performance: 2.364 ns/day, 10.154 hours/ns, 27.356 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.87 | 35.87 | 35.87 | 0.0 | 98.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070335 | 0.070335 | 0.070335 | 0.0 | 0.19 Output | 0.00012529 | 0.00012529 | 0.00012529 | 0.0 | 0.00 Modify | 0.54492 | 0.54492 | 0.54492 | 0.0 | 1.49 Other | | 0.0695 | | | 0.19 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688356.0 ave 688356 max 688356 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688356 Ave neighs/atom = 86.044500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 45342.9212075103 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0