# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.5562932789325723*${_u_distance} variable latticeconst_converted equal 3.5562932789325723*1 lattice diamond ${latticeconst_converted} lattice diamond 3.55629327893257 Lattice spacing in x,y,z = 3.5562933 3.5562933 3.5562933 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (35.562933 35.562933 35.562933) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (35.562933 35.562933 35.562933) create_atoms CPU = 0.006 seconds variable mass_converted equal 12.0107*${_u_mass} variable mass_converted equal 12.0107*1 kim_interactions C WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions C #=== BEGIN kim interactions ================================== pair_style kim Tersoff_LAMMPS_Tersoff_1994_SiC__MO_794973922560_000 pair_coeff * * C #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 12.0107 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 44977.2301895718 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 44977.2301895718/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 44977.2301895718/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 44977.2301895718/(1*1*${_u_distance}) variable V0_metal equal 44977.2301895718/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 44977.2301895718*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 44977.2301895718 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_794973922560_000#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -59460.126 -59460.126 -59783.908 -59783.908 313.15 313.15 44977.23 44977.23 7689.1664 7689.1664 1000 -59104.555 -59104.555 -59433.39 -59433.39 318.03776 318.03776 45231.677 45231.677 -2494.606 -2494.606 Loop time of 248.554 on 1 procs for 1000 steps with 8000 atoms Performance: 0.348 ns/day, 69.043 hours/ns, 4.023 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 246.82 | 246.82 | 246.82 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24488 | 0.24488 | 0.24488 | 0.0 | 0.10 Output | 0.00026819 | 0.00026819 | 0.00026819 | 0.0 | 0.00 Modify | 1.3265 | 1.3265 | 1.3265 | 0.0 | 0.53 Other | | 0.1654 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688000.0 ave 688000 max 688000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688000 Ave neighs/atom = 86.000000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -59104.555 -59104.555 -59433.39 -59433.39 318.03776 318.03776 45231.677 45231.677 -2494.606 -2494.606 2000 -59138.456 -59138.456 -59469.933 -59469.933 320.59299 320.59299 45195.493 45195.493 -432.50838 -432.50838 Loop time of 272.557 on 1 procs for 1000 steps with 8000 atoms Performance: 0.317 ns/day, 75.710 hours/ns, 3.669 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 270.64 | 270.64 | 270.64 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25966 | 0.25966 | 0.25966 | 0.0 | 0.10 Output | 0.00031003 | 0.00031003 | 0.00031003 | 0.0 | 0.00 Modify | 1.4765 | 1.4765 | 1.4765 | 0.0 | 0.54 Other | | 0.1768 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 703938.0 ave 703938 max 703938 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 703938 Ave neighs/atom = 87.992250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -59138.456 -59138.456 -59469.933 -59469.933 320.59299 320.59299 45195.493 45195.493 -432.50838 -432.50838 3000 -59123.52 -59123.52 -59444.412 -59444.412 310.35492 310.35492 45183.936 45183.936 1684.5062 1684.5062 Loop time of 274.959 on 1 procs for 1000 steps with 8000 atoms Performance: 0.314 ns/day, 76.377 hours/ns, 3.637 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 273.01 | 273.01 | 273.01 | 0.0 | 99.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26096 | 0.26096 | 0.26096 | 0.0 | 0.09 Output | 0.00030064 | 0.00030064 | 0.00030064 | 0.0 | 0.00 Modify | 1.5063 | 1.5063 | 1.5063 | 0.0 | 0.55 Other | | 0.1802 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 703638.0 ave 703638 max 703638 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 703638 Ave neighs/atom = 87.954750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -59123.52 -59123.52 -59444.412 -59444.412 310.35492 310.35492 45183.936 45183.936 1684.5062 1684.5062 4000 -59127.445 -59127.445 -59449.582 -59449.582 311.559 311.559 45215.627 45215.627 -1659.5061 -1659.5061 Loop time of 276.042 on 1 procs for 1000 steps with 8000 atoms Performance: 0.313 ns/day, 76.678 hours/ns, 3.623 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 274.09 | 274.09 | 274.09 | 0.0 | 99.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26241 | 0.26241 | 0.26241 | 0.0 | 0.10 Output | 0.00026349 | 0.00026349 | 0.00026349 | 0.0 | 0.00 Modify | 1.5102 | 1.5102 | 1.5102 | 0.0 | 0.55 Other | | 0.1804 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 703952.0 ave 703952 max 703952 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 703952 Ave neighs/atom = 87.994000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -59127.445 -59127.445 -59449.582 -59449.582 311.559 311.559 45215.627 45215.627 -1659.5061 -1659.5061 5000 -59131.795 -59131.795 -59445.199 -59445.199 303.11232 303.11232 45182.025 45182.025 1347.7334 1347.7334 Loop time of 274.783 on 1 procs for 1000 steps with 8000 atoms Performance: 0.314 ns/day, 76.329 hours/ns, 3.639 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 272.84 | 272.84 | 272.84 | 0.0 | 99.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26091 | 0.26091 | 0.26091 | 0.0 | 0.09 Output | 0.00031172 | 0.00031172 | 0.00031172 | 0.0 | 0.00 Modify | 1.4998 | 1.4998 | 1.4998 | 0.0 | 0.55 Other | | 0.1786 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 703614.0 ave 703614 max 703614 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 703614 Ave neighs/atom = 87.951750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.825106228262, Press = 610.27288427791 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -59131.795 -59131.795 -59445.199 -59445.199 303.11232 303.11232 45182.025 45182.025 1347.7334 1347.7334 6000 -59122.134 -59122.134 -59445.687 -59445.687 312.92849 312.92849 45187.211 45187.211 1230.7398 1230.7398 Loop time of 272.122 on 1 procs for 1000 steps with 8000 atoms Performance: 0.318 ns/day, 75.589 hours/ns, 3.675 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 270.18 | 270.18 | 270.18 | 0.0 | 99.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25796 | 0.25796 | 0.25796 | 0.0 | 0.09 Output | 0.00022002 | 0.00022002 | 0.00022002 | 0.0 | 0.00 Modify | 1.5047 | 1.5047 | 1.5047 | 0.0 | 0.55 Other | | 0.1768 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 704572.0 ave 704572 max 704572 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 704572 Ave neighs/atom = 88.071500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.723095185734, Press = -91.8012435915982 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -59122.134 -59122.134 -59445.687 -59445.687 312.92849 312.92849 45187.211 45187.211 1230.7398 1230.7398 7000 -59133.706 -59133.706 -59447.092 -59447.092 303.09573 303.09573 45234.665 45234.665 -3787.8551 -3787.8551 Loop time of 276.348 on 1 procs for 1000 steps with 8000 atoms Performance: 0.313 ns/day, 76.763 hours/ns, 3.619 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 274.4 | 274.4 | 274.4 | 0.0 | 99.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25976 | 0.25976 | 0.25976 | 0.0 | 0.09 Output | 0.00027225 | 0.00027225 | 0.00027225 | 0.0 | 0.00 Modify | 1.5128 | 1.5128 | 1.5128 | 0.0 | 0.55 Other | | 0.1766 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 704376.0 ave 704376 max 704376 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 704376 Ave neighs/atom = 88.047000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.991077072866, Press = 23.3022131106142 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -59133.706 -59133.706 -59447.092 -59447.092 303.09573 303.09573 45234.665 45234.665 -3787.8551 -3787.8551 8000 -59123.29 -59123.29 -59450.737 -59450.737 316.69531 316.69531 45180.587 45180.587 1783.5182 1783.5182 Loop time of 276.367 on 1 procs for 1000 steps with 8000 atoms Performance: 0.313 ns/day, 76.769 hours/ns, 3.618 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 274.36 | 274.36 | 274.36 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26251 | 0.26251 | 0.26251 | 0.0 | 0.09 Output | 0.00022536 | 0.00022536 | 0.00022536 | 0.0 | 0.00 Modify | 1.5603 | 1.5603 | 1.5603 | 0.0 | 0.56 Other | | 0.1792 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 702966.0 ave 702966 max 702966 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 702966 Ave neighs/atom = 87.870750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.100268633308, Press = 8.95590283628452 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -59123.29 -59123.29 -59450.737 -59450.737 316.69531 316.69531 45180.587 45180.587 1783.5182 1783.5182 9000 -59130.215 -59130.215 -59457.316 -59457.316 316.35974 316.35974 45204.208 45204.208 -771.6737 -771.6737 Loop time of 277.923 on 1 procs for 1000 steps with 8000 atoms Performance: 0.311 ns/day, 77.201 hours/ns, 3.598 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 275.92 | 275.92 | 275.92 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26286 | 0.26286 | 0.26286 | 0.0 | 0.09 Output | 0.00022706 | 0.00022706 | 0.00022706 | 0.0 | 0.00 Modify | 1.5538 | 1.5538 | 1.5538 | 0.0 | 0.56 Other | | 0.181 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 704322.0 ave 704322 max 704322 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 704322 Ave neighs/atom = 88.040250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.018278502549, Press = -7.16589862399794 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -59130.215 -59130.215 -59457.316 -59457.316 316.35974 316.35974 45204.208 45204.208 -771.6737 -771.6737 10000 -59130.133 -59130.133 -59455.646 -59455.646 314.82382 314.82382 45204.467 45204.467 -494.57355 -494.57355 Loop time of 276.039 on 1 procs for 1000 steps with 8000 atoms Performance: 0.313 ns/day, 76.677 hours/ns, 3.623 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 274.05 | 274.05 | 274.05 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26383 | 0.26383 | 0.26383 | 0.0 | 0.10 Output | 0.00023036 | 0.00023036 | 0.00023036 | 0.0 | 0.00 Modify | 1.5439 | 1.5439 | 1.5439 | 0.0 | 0.56 Other | | 0.1795 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 703272.0 ave 703272 max 703272 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 703272 Ave neighs/atom = 87.909000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.130599394749, Press = 8.91306092441714 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -59130.133 -59130.133 -59455.646 -59455.646 314.82382 314.82382 45204.467 45204.467 -494.57355 -494.57355 11000 -59121.62 -59121.62 -59450.589 -59450.589 318.16653 318.16653 45171.247 45171.247 2890.6719 2890.6719 Loop time of 277.056 on 1 procs for 1000 steps with 8000 atoms Performance: 0.312 ns/day, 76.960 hours/ns, 3.609 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 275.03 | 275.03 | 275.03 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26578 | 0.26578 | 0.26578 | 0.0 | 0.10 Output | 0.00022606 | 0.00022606 | 0.00022606 | 0.0 | 0.00 Modify | 1.5764 | 1.5764 | 1.5764 | 0.0 | 0.57 Other | | 0.1808 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 703680.0 ave 703680 max 703680 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 703680 Ave neighs/atom = 87.960000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.110318634206, Press = -2.77539785278781 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -59121.62 -59121.62 -59450.589 -59450.589 318.16653 318.16653 45171.247 45171.247 2890.6719 2890.6719 12000 -59129.933 -59129.933 -59455.144 -59455.144 314.53214 314.53214 45241.719 45241.719 -4321.6039 -4321.6039 Loop time of 272.786 on 1 procs for 1000 steps with 8000 atoms Performance: 0.317 ns/day, 75.774 hours/ns, 3.666 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 270.79 | 270.79 | 270.79 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26182 | 0.26182 | 0.26182 | 0.0 | 0.10 Output | 0.00030768 | 0.00030768 | 0.00030768 | 0.0 | 0.00 Modify | 1.5533 | 1.5533 | 1.5533 | 0.0 | 0.57 Other | | 0.1791 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 704524.0 ave 704524 max 704524 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 704524 Ave neighs/atom = 88.065500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.263806373106, Press = -7.01724196447708 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -59129.933 -59129.933 -59455.144 -59455.144 314.53214 314.53214 45241.719 45241.719 -4321.6039 -4321.6039 13000 -59124.601 -59124.601 -59452.346 -59452.346 316.9832 316.9832 45189.336 45189.336 1000.7885 1000.7885 Loop time of 275.089 on 1 procs for 1000 steps with 8000 atoms Performance: 0.314 ns/day, 76.414 hours/ns, 3.635 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 273.11 | 273.11 | 273.11 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26132 | 0.26132 | 0.26132 | 0.0 | 0.09 Output | 0.00027183 | 0.00027183 | 0.00027183 | 0.0 | 0.00 Modify | 1.5403 | 1.5403 | 1.5403 | 0.0 | 0.56 Other | | 0.179 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 702816.0 ave 702816 max 702816 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 702816 Ave neighs/atom = 87.852000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.391060395215, Press = 10.3722533365468 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -59124.601 -59124.601 -59452.346 -59452.346 316.9832 316.9832 45189.336 45189.336 1000.7885 1000.7885 14000 -59133.143 -59133.143 -59452.88 -59452.88 309.23777 309.23777 45190.837 45190.837 477.05841 477.05841 Loop time of 275.877 on 1 procs for 1000 steps with 8000 atoms Performance: 0.313 ns/day, 76.633 hours/ns, 3.625 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 273.88 | 273.88 | 273.88 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26497 | 0.26497 | 0.26497 | 0.0 | 0.10 Output | 0.00029958 | 0.00029958 | 0.00029958 | 0.0 | 0.00 Modify | 1.5531 | 1.5531 | 1.5531 | 0.0 | 0.56 Other | | 0.1804 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 704040.0 ave 704040 max 704040 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 704040 Ave neighs/atom = 88.005000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.346760858351, Press = -1.62476311445055 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -59133.143 -59133.143 -59452.88 -59452.88 309.23777 309.23777 45190.837 45190.837 477.05841 477.05841 15000 -59125.803 -59125.803 -59453.094 -59453.094 316.54348 316.54348 45208.834 45208.834 -1080.9828 -1080.9828 Loop time of 268.741 on 1 procs for 1000 steps with 8000 atoms Performance: 0.321 ns/day, 74.650 hours/ns, 3.721 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 266.84 | 266.84 | 266.84 | 0.0 | 99.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25496 | 0.25496 | 0.25496 | 0.0 | 0.09 Output | 0.00050491 | 0.00050491 | 0.00050491 | 0.0 | 0.00 Modify | 1.4701 | 1.4701 | 1.4701 | 0.0 | 0.55 Other | | 0.1729 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 704070.0 ave 704070 max 704070 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 704070 Ave neighs/atom = 88.008750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.301400239239, Press = 0.802092040375102 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -59125.803 -59125.803 -59453.094 -59453.094 316.54348 316.54348 45208.834 45208.834 -1080.9828 -1080.9828 16000 -59130.801 -59130.801 -59453.874 -59453.874 312.4638 312.4638 45185.33 45185.33 1201.3822 1201.3822 Loop time of 273.604 on 1 procs for 1000 steps with 8000 atoms Performance: 0.316 ns/day, 76.001 hours/ns, 3.655 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 271.64 | 271.64 | 271.64 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26181 | 0.26181 | 0.26181 | 0.0 | 0.10 Output | 0.00022978 | 0.00022978 | 0.00022978 | 0.0 | 0.00 Modify | 1.528 | 1.528 | 1.528 | 0.0 | 0.56 Other | | 0.1786 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 703402.0 ave 703402 max 703402 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 703402 Ave neighs/atom = 87.925250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.134446889845, Press = 2.47694563137634 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -59130.801 -59130.801 -59453.874 -59453.874 312.4638 312.4638 45185.33 45185.33 1201.3822 1201.3822 17000 -59128.648 -59128.648 -59455.251 -59455.251 315.87762 315.87762 45201.128 45201.128 -273.85145 -273.85145 Loop time of 273.742 on 1 procs for 1000 steps with 8000 atoms Performance: 0.316 ns/day, 76.039 hours/ns, 3.653 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 271.78 | 271.78 | 271.78 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26201 | 0.26201 | 0.26201 | 0.0 | 0.10 Output | 0.00022428 | 0.00022428 | 0.00022428 | 0.0 | 0.00 Modify | 1.5218 | 1.5218 | 1.5218 | 0.0 | 0.56 Other | | 0.1788 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 703982.0 ave 703982 max 703982 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 703982 Ave neighs/atom = 87.997750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.140830060741, Press = -5.2295395277129 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -59128.648 -59128.648 -59455.251 -59455.251 315.87762 315.87762 45201.128 45201.128 -273.85145 -273.85145 18000 -59132.137 -59132.137 -59454.343 -59454.343 311.6257 311.6257 45223.955 45223.955 -2704.6091 -2704.6091 Loop time of 273.897 on 1 procs for 1000 steps with 8000 atoms Performance: 0.315 ns/day, 76.083 hours/ns, 3.651 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 271.94 | 271.94 | 271.94 | 0.0 | 99.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26074 | 0.26074 | 0.26074 | 0.0 | 0.10 Output | 0.00022094 | 0.00022094 | 0.00022094 | 0.0 | 0.00 Modify | 1.5151 | 1.5151 | 1.5151 | 0.0 | 0.55 Other | | 0.1782 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 703578.0 ave 703578 max 703578 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 703578 Ave neighs/atom = 87.947250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.008572882321, Press = 5.25395709822961 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -59132.137 -59132.137 -59454.343 -59454.343 311.6257 311.6257 45223.955 45223.955 -2704.6091 -2704.6091 19000 -59132.628 -59132.628 -59452.876 -59452.876 309.73261 309.73261 45161.49 45161.49 3505.7088 3505.7088 Loop time of 268.889 on 1 procs for 1000 steps with 8000 atoms Performance: 0.321 ns/day, 74.691 hours/ns, 3.719 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 266.96 | 266.96 | 266.96 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2585 | 0.2585 | 0.2585 | 0.0 | 0.10 Output | 0.00022893 | 0.00022893 | 0.00022893 | 0.0 | 0.00 Modify | 1.4935 | 1.4935 | 1.4935 | 0.0 | 0.56 Other | | 0.1758 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 702882.0 ave 702882 max 702882 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 702882 Ave neighs/atom = 87.860250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.009163306546, Press = 1.13853412891464 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -59132.628 -59132.628 -59452.876 -59452.876 309.73261 309.73261 45161.49 45161.49 3505.7088 3505.7088 20000 -59130.303 -59130.303 -59453.911 -59453.911 312.98223 312.98223 45211.653 45211.653 -1404.5293 -1404.5293 Loop time of 275.607 on 1 procs for 1000 steps with 8000 atoms Performance: 0.313 ns/day, 76.558 hours/ns, 3.628 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 273.62 | 273.62 | 273.62 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26696 | 0.26696 | 0.26696 | 0.0 | 0.10 Output | 0.00022761 | 0.00022761 | 0.00022761 | 0.0 | 0.00 Modify | 1.542 | 1.542 | 1.542 | 0.0 | 0.56 Other | | 0.1792 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 704702.0 ave 704702 max 704702 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 704702 Ave neighs/atom = 88.087750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.002787384452, Press = -1.94053198442661 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -59130.303 -59130.303 -59453.911 -59453.911 312.98223 312.98223 45211.653 45211.653 -1404.5293 -1404.5293 21000 -59129.733 -59129.733 -59450.461 -59450.461 310.19594 310.19594 45198.654 45198.654 -128.86804 -128.86804 Loop time of 267.93 on 1 procs for 1000 steps with 8000 atoms Performance: 0.322 ns/day, 74.425 hours/ns, 3.732 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 266.02 | 266.02 | 266.02 | 0.0 | 99.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25661 | 0.25661 | 0.25661 | 0.0 | 0.10 Output | 0.00027326 | 0.00027326 | 0.00027326 | 0.0 | 0.00 Modify | 1.4768 | 1.4768 | 1.4768 | 0.0 | 0.55 Other | | 0.1734 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 703474.0 ave 703474 max 703474 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 703474 Ave neighs/atom = 87.934250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.079030600869, Press = 1.53228279066735 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5 ghost atom cutoff = 5 binsize = 2.5, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 11.19 | 11.19 | 11.19 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -59129.733 -59129.733 -59450.461 -59450.461 310.19594 310.19594 45198.654 45198.654 -128.86804 -128.86804 22000 -59127.732 -59127.732 -59449.74 -59449.74 311.43356 311.43356 45191.864 45191.864 646.73711 646.73711 Loop time of 261.736 on 1 procs for 1000 steps with 8000 atoms Performance: 0.330 ns/day, 72.704 hours/ns, 3.821 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 259.86 | 259.86 | 259.86 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25581 | 0.25581 | 0.25581 | 0.0 | 0.10 Output | 0.00023994 | 0.00023994 | 0.00023994 | 0.0 | 0.00 Modify | 1.4499 | 1.4499 | 1.4499 | 0.0 | 0.55 Other | | 0.1725 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 703858.0 ave 703858 max 703858 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 703858 Ave neighs/atom = 87.982250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 45197.9531546591 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0