# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.565719366073609*${_u_distance} variable latticeconst_converted equal 3.565719366073609*1 lattice diamond ${latticeconst_converted} lattice diamond 3.56571936607361 Lattice spacing in x,y,z = 3.5657194 3.5657194 3.5657194 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (35.657194 35.657194 35.657194) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms create_atoms CPU = 0.001 seconds variable mass_converted equal 12.0107*${_u_mass} variable mass_converted equal 12.0107*1 kim_interactions C #=== BEGIN kim_interactions ================================== pair_style kim Tersoff_LAMMPS_ErhartAlbe_2005_SiC__MO_903987585848_004 pair_coeff * * C #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 12.0107 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 45335.8204157622 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 45335.8204157622/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 45335.8204157622/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 45335.8204157622/(1*1*${_u_distance}) variable V0_metal equal 45335.8204157622/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 45335.8204157622*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 45335.8204157622 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 273.15*${_u_temperature} variable temp_converted equal 273.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 273.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "273.15 - 0.2" variable T_up equal "273.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.96 ghost atom cutoff = 4.96 binsize = 2.48, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 4.96 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -58703.136 -58703.136 -58985.559 -58985.559 273.15 273.15 45335.82 45335.82 6653.8746 6653.8746 1000 -58394.526 -58394.526 -58687.852 -58687.852 283.69424 283.69424 45521.641 45521.641 2781.7035 2781.7035 Loop time of 104.03 on 1 procs for 1000 steps with 8000 atoms Performance: 0.831 ns/day, 28.897 hours/ns, 9.613 timesteps/s 47.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 103.28 | 103.28 | 103.28 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12781 | 0.12781 | 0.12781 | 0.0 | 0.12 Output | 4.76e-05 | 4.76e-05 | 4.76e-05 | 0.0 | 0.00 Modify | 0.5217 | 0.5217 | 0.5217 | 0.0 | 0.50 Other | | 0.1005 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688000.0 ave 688000 max 688000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688000 Ave neighs/atom = 86.000000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -58394.526 -58394.526 -58687.852 -58687.852 283.69424 283.69424 45521.641 45521.641 2781.7035 2781.7035 2000 -58423.342 -58423.342 -58692.154 -58692.154 259.98539 259.98539 45534.804 45534.804 641.14566 641.14566 Loop time of 104.311 on 1 procs for 1000 steps with 8000 atoms Performance: 0.828 ns/day, 28.975 hours/ns, 9.587 timesteps/s 47.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 103.41 | 103.41 | 103.41 | 0.0 | 99.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15077 | 0.15077 | 0.15077 | 0.0 | 0.14 Output | 5.04e-05 | 5.04e-05 | 5.04e-05 | 0.0 | 0.00 Modify | 0.6615 | 0.6615 | 0.6615 | 0.0 | 0.63 Other | | 0.09263 | | | 0.09 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688446.0 ave 688446 max 688446 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688446 Ave neighs/atom = 86.055750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -58423.342 -58423.342 -58692.154 -58692.154 259.98539 259.98539 45534.804 45534.804 641.14566 641.14566 3000 -58411.557 -58411.557 -58695.122 -58695.122 274.25332 274.25332 45552.062 45552.062 -758.23071 -758.23071 Loop time of 101.293 on 1 procs for 1000 steps with 8000 atoms Performance: 0.853 ns/day, 28.137 hours/ns, 9.872 timesteps/s 48.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 100.46 | 100.46 | 100.46 | 0.0 | 99.18 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14844 | 0.14844 | 0.14844 | 0.0 | 0.15 Output | 5.45e-05 | 5.45e-05 | 5.45e-05 | 0.0 | 0.00 Modify | 0.61148 | 0.61148 | 0.61148 | 0.0 | 0.60 Other | | 0.07242 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688290.0 ave 688290 max 688290 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688290 Ave neighs/atom = 86.036250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -58411.557 -58411.557 -58695.122 -58695.122 274.25332 274.25332 45552.062 45552.062 -758.23071 -758.23071 4000 -58413.892 -58413.892 -58701.668 -58701.668 278.32684 278.32684 45558.174 45558.174 -1782.6566 -1782.6566 Loop time of 106.469 on 1 procs for 1000 steps with 8000 atoms Performance: 0.812 ns/day, 29.575 hours/ns, 9.392 timesteps/s 46.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 105.57 | 105.57 | 105.57 | 0.0 | 99.15 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13089 | 0.13089 | 0.13089 | 0.0 | 0.12 Output | 5.23e-05 | 5.23e-05 | 5.23e-05 | 0.0 | 0.00 Modify | 0.71932 | 0.71932 | 0.71932 | 0.0 | 0.68 Other | | 0.05282 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688320.0 ave 688320 max 688320 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688320 Ave neighs/atom = 86.040000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -58413.892 -58413.892 -58701.668 -58701.668 278.32684 278.32684 45558.174 45558.174 -1782.6566 -1782.6566 5000 -58418.538 -58418.538 -58695.118 -58695.118 267.49752 267.49752 45563.417 45563.417 -2001.2836 -2001.2836 Loop time of 104.439 on 1 procs for 1000 steps with 8000 atoms Performance: 0.827 ns/day, 29.011 hours/ns, 9.575 timesteps/s 47.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 103.62 | 103.62 | 103.62 | 0.0 | 99.22 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14835 | 0.14835 | 0.14835 | 0.0 | 0.14 Output | 3.58e-05 | 3.58e-05 | 3.58e-05 | 0.0 | 0.00 Modify | 0.58308 | 0.58308 | 0.58308 | 0.0 | 0.56 Other | | 0.08286 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688344.0 ave 688344 max 688344 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688344 Ave neighs/atom = 86.043000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.214926894859, Press = 121.808019461539 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -58418.538 -58418.538 -58695.118 -58695.118 267.49752 267.49752 45563.417 45563.417 -2001.2836 -2001.2836 6000 -58409.517 -58409.517 -58693.128 -58693.128 274.29835 274.29835 45568.364 45568.364 -2288.1469 -2288.1469 Loop time of 102.515 on 1 procs for 1000 steps with 8000 atoms Performance: 0.843 ns/day, 28.476 hours/ns, 9.755 timesteps/s 48.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 101.82 | 101.82 | 101.82 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1362 | 0.1362 | 0.1362 | 0.0 | 0.13 Output | 4.41e-05 | 4.41e-05 | 4.41e-05 | 0.0 | 0.00 Modify | 0.52754 | 0.52754 | 0.52754 | 0.0 | 0.51 Other | | 0.03256 | | | 0.03 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688350.0 ave 688350 max 688350 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688350 Ave neighs/atom = 86.043750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.816342975231, Press = -44.3163115720306 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -58409.517 -58409.517 -58693.128 -58693.128 274.29835 274.29835 45568.364 45568.364 -2288.1469 -2288.1469 7000 -58419.782 -58419.782 -58700.903 -58700.903 271.89049 271.89049 45534.355 45534.355 598.83951 598.83951 Loop time of 98.0699 on 1 procs for 1000 steps with 8000 atoms Performance: 0.881 ns/day, 27.242 hours/ns, 10.197 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 97.234 | 97.234 | 97.234 | 0.0 | 99.15 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.098416 | 0.098416 | 0.098416 | 0.0 | 0.10 Output | 4.38e-05 | 4.38e-05 | 4.38e-05 | 0.0 | 0.00 Modify | 0.66502 | 0.66502 | 0.66502 | 0.0 | 0.68 Other | | 0.07245 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688298.0 ave 688298 max 688298 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688298 Ave neighs/atom = 86.037250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.983549784374, Press = -19.7230757882692 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -58419.782 -58419.782 -58700.903 -58700.903 271.89049 271.89049 45534.355 45534.355 598.83951 598.83951 8000 -58411.174 -58411.174 -58704.809 -58704.809 283.99283 283.99283 45528.039 45528.039 1355.8768 1355.8768 Loop time of 98.2413 on 1 procs for 1000 steps with 8000 atoms Performance: 0.879 ns/day, 27.289 hours/ns, 10.179 timesteps/s 50.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 97.486 | 97.486 | 97.486 | 0.0 | 99.23 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17893 | 0.17893 | 0.17893 | 0.0 | 0.18 Output | 4.41e-05 | 4.41e-05 | 4.41e-05 | 0.0 | 0.00 Modify | 0.54422 | 0.54422 | 0.54422 | 0.0 | 0.55 Other | | 0.03229 | | | 0.03 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688338.0 ave 688338 max 688338 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688338 Ave neighs/atom = 86.042250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.115012302928, Press = 3.7056817830212 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -58411.174 -58411.174 -58704.809 -58704.809 283.99283 283.99283 45528.039 45528.039 1355.8768 1355.8768 9000 -58415.988 -58415.988 -58692.765 -58692.765 267.68862 267.68862 45525.829 45525.829 1649.3002 1649.3002 Loop time of 75.574 on 1 procs for 1000 steps with 8000 atoms Performance: 1.143 ns/day, 20.993 hours/ns, 13.232 timesteps/s 64.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 74.965 | 74.965 | 74.965 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077867 | 0.077867 | 0.077867 | 0.0 | 0.10 Output | 4.43e-05 | 4.43e-05 | 4.43e-05 | 0.0 | 0.00 Modify | 0.49601 | 0.49601 | 0.49601 | 0.0 | 0.66 Other | | 0.03509 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688288.0 ave 688288 max 688288 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688288 Ave neighs/atom = 86.036000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.023460858198, Press = 9.36860061175064 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -58415.988 -58415.988 -58692.765 -58692.765 267.68862 267.68862 45525.829 45525.829 1649.3002 1649.3002 10000 -58417.72 -58417.72 -58705.846 -58705.846 278.66457 278.66457 45525.267 45525.267 1545.7977 1545.7977 Loop time of 73.8607 on 1 procs for 1000 steps with 8000 atoms Performance: 1.170 ns/day, 20.517 hours/ns, 13.539 timesteps/s 66.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 73.301 | 73.301 | 73.301 | 0.0 | 99.24 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.084055 | 0.084055 | 0.084055 | 0.0 | 0.11 Output | 4.38e-05 | 4.38e-05 | 4.38e-05 | 0.0 | 0.00 Modify | 0.44358 | 0.44358 | 0.44358 | 0.0 | 0.60 Other | | 0.0325 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688422.0 ave 688422 max 688422 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688422 Ave neighs/atom = 86.052750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.122518523153, Press = 11.8346943055045 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -58417.72 -58417.72 -58705.846 -58705.846 278.66457 278.66457 45525.267 45525.267 1545.7977 1545.7977 11000 -58410.988 -58410.988 -58696.342 -58696.342 275.98402 275.98402 45535.031 45535.031 949.32906 949.32906 Loop time of 94.2037 on 1 procs for 1000 steps with 8000 atoms Performance: 0.917 ns/day, 26.168 hours/ns, 10.615 timesteps/s 52.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 93.372 | 93.372 | 93.372 | 0.0 | 99.12 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.079968 | 0.079968 | 0.079968 | 0.0 | 0.08 Output | 4.38e-05 | 4.38e-05 | 4.38e-05 | 0.0 | 0.00 Modify | 0.63864 | 0.63864 | 0.63864 | 0.0 | 0.68 Other | | 0.1126 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688282.0 ave 688282 max 688282 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688282 Ave neighs/atom = 86.035250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.012086556105, Press = 16.4713312940901 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -58410.988 -58410.988 -58696.342 -58696.342 275.98402 275.98402 45535.031 45535.031 949.32906 949.32906 12000 -58419.217 -58419.217 -58697.267 -58697.267 268.92041 268.92041 45555.718 45555.718 -1496.2665 -1496.2665 Loop time of 85.5632 on 1 procs for 1000 steps with 8000 atoms Performance: 1.010 ns/day, 23.768 hours/ns, 11.687 timesteps/s 57.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 84.875 | 84.875 | 84.875 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.05757 | 0.05757 | 0.05757 | 0.0 | 0.07 Output | 4.54e-05 | 4.54e-05 | 4.54e-05 | 0.0 | 0.00 Modify | 0.51815 | 0.51815 | 0.51815 | 0.0 | 0.61 Other | | 0.1125 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688374.0 ave 688374 max 688374 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688374 Ave neighs/atom = 86.046750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.981722587058, Press = 17.2885834328714 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -58419.217 -58419.217 -58697.267 -58697.267 268.92041 268.92041 45555.718 45555.718 -1496.2665 -1496.2665 13000 -58412.704 -58412.704 -58689.542 -58689.542 267.74798 267.74798 45577.05 45577.05 -3295.5503 -3295.5503 Loop time of 91.1728 on 1 procs for 1000 steps with 8000 atoms Performance: 0.948 ns/day, 25.326 hours/ns, 10.968 timesteps/s 53.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 90.476 | 90.476 | 90.476 | 0.0 | 99.24 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.098278 | 0.098278 | 0.098278 | 0.0 | 0.11 Output | 4.43e-05 | 4.43e-05 | 4.43e-05 | 0.0 | 0.00 Modify | 0.55594 | 0.55594 | 0.55594 | 0.0 | 0.61 Other | | 0.04243 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688348.0 ave 688348 max 688348 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688348 Ave neighs/atom = 86.043500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.880295187255, Press = 9.20969055193351 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -58412.704 -58412.704 -58689.542 -58689.542 267.74798 267.74798 45577.05 45577.05 -3295.5503 -3295.5503 14000 -58422.94 -58422.94 -58699.943 -58699.943 267.90739 267.90739 45552.347 45552.347 -1249.4209 -1249.4209 Loop time of 87.601 on 1 procs for 1000 steps with 8000 atoms Performance: 0.986 ns/day, 24.334 hours/ns, 11.415 timesteps/s 56.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 86.945 | 86.945 | 86.945 | 0.0 | 99.25 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.09787 | 0.09787 | 0.09787 | 0.0 | 0.11 Output | 4.37e-05 | 4.37e-05 | 4.37e-05 | 0.0 | 0.00 Modify | 0.50569 | 0.50569 | 0.50569 | 0.0 | 0.58 Other | | 0.05222 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688366.0 ave 688366 max 688366 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688366 Ave neighs/atom = 86.045750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.854195555675, Press = 3.54715819804094 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -58422.94 -58422.94 -58699.943 -58699.943 267.90739 267.90739 45552.347 45552.347 -1249.4209 -1249.4209 15000 -58413.855 -58413.855 -58696.911 -58696.911 273.76131 273.76131 45551.464 45551.464 -939.97579 -939.97579 Loop time of 95.4474 on 1 procs for 1000 steps with 8000 atoms Performance: 0.905 ns/day, 26.513 hours/ns, 10.477 timesteps/s 51.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 94.742 | 94.742 | 94.742 | 0.0 | 99.26 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.096338 | 0.096338 | 0.096338 | 0.0 | 0.10 Output | 4.41e-05 | 4.41e-05 | 4.41e-05 | 0.0 | 0.00 Modify | 0.52624 | 0.52624 | 0.52624 | 0.0 | 0.55 Other | | 0.08259 | | | 0.09 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688354.0 ave 688354 max 688354 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688354 Ave neighs/atom = 86.044250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.798426765586, Press = 1.78834213057576 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -58413.855 -58413.855 -58696.911 -58696.911 273.76131 273.76131 45551.464 45551.464 -939.97579 -939.97579 16000 -58415.228 -58415.228 -58695.215 -58695.215 270.79357 270.79357 45543.678 45543.678 -139.20488 -139.20488 Loop time of 84.0932 on 1 procs for 1000 steps with 8000 atoms Performance: 1.027 ns/day, 23.359 hours/ns, 11.892 timesteps/s 59.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 83.445 | 83.445 | 83.445 | 0.0 | 99.23 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.07935 | 0.07935 | 0.07935 | 0.0 | 0.09 Output | 4.47e-05 | 4.47e-05 | 4.47e-05 | 0.0 | 0.00 Modify | 0.49508 | 0.49508 | 0.49508 | 0.0 | 0.59 Other | | 0.07322 | | | 0.09 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688342.0 ave 688342 max 688342 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688342 Ave neighs/atom = 86.042750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.779763315982, Press = 0.289886668596929 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -58415.228 -58415.228 -58695.215 -58695.215 270.79357 270.79357 45543.678 45543.678 -139.20488 -139.20488 17000 -58412.781 -58412.781 -58698.427 -58698.427 276.26612 276.26612 45523.776 45523.776 1866.6656 1866.6656 Loop time of 89.6139 on 1 procs for 1000 steps with 8000 atoms Performance: 0.964 ns/day, 24.893 hours/ns, 11.159 timesteps/s 55.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 89.006 | 89.006 | 89.006 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058084 | 0.058084 | 0.058084 | 0.0 | 0.06 Output | 4.39e-05 | 4.39e-05 | 4.39e-05 | 0.0 | 0.00 Modify | 0.46314 | 0.46314 | 0.46314 | 0.0 | 0.52 Other | | 0.08632 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688328.0 ave 688328 max 688328 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688328 Ave neighs/atom = 86.041000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.881267407447, Press = -1.76281833235761 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -58412.781 -58412.781 -58698.427 -58698.427 276.26612 276.26612 45523.776 45523.776 1866.6656 1866.6656 18000 -58408.175 -58408.175 -58695.654 -58695.654 278.03987 278.03987 45503.822 45503.822 4124.645 4124.645 Loop time of 76.6056 on 1 procs for 1000 steps with 8000 atoms Performance: 1.128 ns/day, 21.279 hours/ns, 13.054 timesteps/s 64.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 76.059 | 76.059 | 76.059 | 0.0 | 99.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058028 | 0.058028 | 0.058028 | 0.0 | 0.08 Output | 4.44e-05 | 4.44e-05 | 4.44e-05 | 0.0 | 0.00 Modify | 0.4366 | 0.4366 | 0.4366 | 0.0 | 0.57 Other | | 0.05238 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688344.0 ave 688344 max 688344 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688344 Ave neighs/atom = 86.043000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.939299662525, Press = 1.67014858591001 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -58408.175 -58408.175 -58695.654 -58695.654 278.03987 278.03987 45503.822 45503.822 4124.645 4124.645 19000 -58416.86 -58416.86 -58705.08 -58705.08 278.75528 278.75528 45510.657 45510.657 2983.1166 2983.1166 Loop time of 88.5708 on 1 procs for 1000 steps with 8000 atoms Performance: 0.975 ns/day, 24.603 hours/ns, 11.290 timesteps/s 55.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 87.828 | 87.828 | 87.828 | 0.0 | 99.16 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.098366 | 0.098366 | 0.098366 | 0.0 | 0.11 Output | 4.47e-05 | 4.47e-05 | 4.47e-05 | 0.0 | 0.00 Modify | 0.57127 | 0.57127 | 0.57127 | 0.0 | 0.64 Other | | 0.07267 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688432.0 ave 688432 max 688432 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688432 Ave neighs/atom = 86.054000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.026434749546, Press = 4.97076518310573 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -58416.86 -58416.86 -58705.08 -58705.08 278.75528 278.75528 45510.657 45510.657 2983.1166 2983.1166 20000 -58410.833 -58410.833 -58693.56 -58693.56 273.44373 273.44373 45530.621 45530.621 1333.726 1333.726 Loop time of 87.0353 on 1 procs for 1000 steps with 8000 atoms Performance: 0.993 ns/day, 24.176 hours/ns, 11.490 timesteps/s 57.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 86.263 | 86.263 | 86.263 | 0.0 | 99.11 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.07853 | 0.07853 | 0.07853 | 0.0 | 0.09 Output | 4.49e-05 | 4.49e-05 | 4.49e-05 | 0.0 | 0.00 Modify | 0.66054 | 0.66054 | 0.66054 | 0.0 | 0.76 Other | | 0.03273 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688318.0 ave 688318 max 688318 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688318 Ave neighs/atom = 86.039750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.037659599125, Press = 6.04755000221377 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -58410.833 -58410.833 -58693.56 -58693.56 273.44373 273.44373 45530.621 45530.621 1333.726 1333.726 21000 -58417.753 -58417.753 -58695.684 -58695.684 268.80511 268.80511 45545.066 45545.066 -296.82645 -296.82645 Loop time of 71.0371 on 1 procs for 1000 steps with 8000 atoms Performance: 1.216 ns/day, 19.733 hours/ns, 14.077 timesteps/s 69.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 70.581 | 70.581 | 70.581 | 0.0 | 99.36 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077273 | 0.077273 | 0.077273 | 0.0 | 0.11 Output | 7.15e-05 | 7.15e-05 | 7.15e-05 | 0.0 | 0.00 Modify | 0.34578 | 0.34578 | 0.34578 | 0.0 | 0.49 Other | | 0.03251 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688368.0 ave 688368 max 688368 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688368 Ave neighs/atom = 86.046000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.09643884393, Press = 5.42402138074522 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -58417.753 -58417.753 -58695.684 -58695.684 268.80511 268.80511 45545.066 45545.066 -296.82645 -296.82645 22000 -58411.001 -58411.001 -58695.036 -58695.036 274.70806 274.70806 45556.6 45556.6 -1160.6279 -1160.6279 Loop time of 70.7161 on 1 procs for 1000 steps with 8000 atoms Performance: 1.222 ns/day, 19.643 hours/ns, 14.141 timesteps/s 70.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 70.167 | 70.167 | 70.167 | 0.0 | 99.22 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077354 | 0.077354 | 0.077354 | 0.0 | 0.11 Output | 4.45e-05 | 4.45e-05 | 4.45e-05 | 0.0 | 0.00 Modify | 0.41834 | 0.41834 | 0.41834 | 0.0 | 0.59 Other | | 0.05328 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688418.0 ave 688418 max 688418 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688418 Ave neighs/atom = 86.052250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.162237687117, Press = 3.54224113205611 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -58411.001 -58411.001 -58695.036 -58695.036 274.70806 274.70806 45556.6 45556.6 -1160.6279 -1160.6279 23000 -58416.336 -58416.336 -58694.594 -58694.594 269.12103 269.12103 45551.413 45551.413 -962.14894 -962.14894 Loop time of 73.9536 on 1 procs for 1000 steps with 8000 atoms Performance: 1.168 ns/day, 20.543 hours/ns, 13.522 timesteps/s 67.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 73.206 | 73.206 | 73.206 | 0.0 | 98.99 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11824 | 0.11824 | 0.11824 | 0.0 | 0.16 Output | 4.26e-05 | 4.26e-05 | 4.26e-05 | 0.0 | 0.00 Modify | 0.57655 | 0.57655 | 0.57655 | 0.0 | 0.78 Other | | 0.05261 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688342.0 ave 688342 max 688342 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688342 Ave neighs/atom = 86.042750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.226316778951, Press = 1.98762687394005 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -58416.336 -58416.336 -58694.594 -58694.594 269.12103 269.12103 45551.413 45551.413 -962.14894 -962.14894 24000 -58409.026 -58409.026 -58691.218 -58691.218 272.9253 272.9253 45549.58 45549.58 -454.8912 -454.8912 Loop time of 68.9739 on 1 procs for 1000 steps with 8000 atoms Performance: 1.253 ns/day, 19.159 hours/ns, 14.498 timesteps/s 71.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.419 | 68.419 | 68.419 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057202 | 0.057202 | 0.057202 | 0.0 | 0.08 Output | 4.47e-05 | 4.47e-05 | 4.47e-05 | 0.0 | 0.00 Modify | 0.44544 | 0.44544 | 0.44544 | 0.0 | 0.65 Other | | 0.05221 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688396.0 ave 688396 max 688396 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688396 Ave neighs/atom = 86.049500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.268830146582, Press = 1.59751927443276 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -58409.026 -58409.026 -58691.218 -58691.218 272.9253 272.9253 45549.58 45549.58 -454.8912 -454.8912 25000 -58418.434 -58418.434 -58698.265 -58698.265 270.64195 270.64195 45540.168 45540.168 142.98279 142.98279 Loop time of 66.4007 on 1 procs for 1000 steps with 8000 atoms Performance: 1.301 ns/day, 18.445 hours/ns, 15.060 timesteps/s 74.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 65.836 | 65.836 | 65.836 | 0.0 | 99.15 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.067336 | 0.067336 | 0.067336 | 0.0 | 0.10 Output | 4.37e-05 | 4.37e-05 | 4.37e-05 | 0.0 | 0.00 Modify | 0.42552 | 0.42552 | 0.42552 | 0.0 | 0.64 Other | | 0.0723 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688380.0 ave 688380 max 688380 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688380 Ave neighs/atom = 86.047500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.270691844276, Press = 1.0431337306958 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 10.81 | 10.81 | 10.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -58418.434 -58418.434 -58698.265 -58698.265 270.64195 270.64195 45540.168 45540.168 142.98279 142.98279 26000 -58412.616 -58412.616 -58695.364 -58695.364 273.46294 273.46294 45527.309 45527.309 1495.5428 1495.5428 Loop time of 61.3988 on 1 procs for 1000 steps with 8000 atoms Performance: 1.407 ns/day, 17.055 hours/ns, 16.287 timesteps/s 79.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.904 | 60.904 | 60.904 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057251 | 0.057251 | 0.057251 | 0.0 | 0.09 Output | 4.44e-05 | 4.44e-05 | 4.44e-05 | 0.0 | 0.00 Modify | 0.40527 | 0.40527 | 0.40527 | 0.0 | 0.66 Other | | 0.0321 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688316.0 ave 688316 max 688316 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688316 Ave neighs/atom = 86.039500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T273.15.out" else "print 'not_converged' file output/vol_T273.15.out" print '${V}' file output/vol_T273.15.out 45542.5971876231 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0