# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.5564776659011836*${_u_distance} variable latticeconst_converted equal 3.5564776659011836*1 lattice diamond ${latticeconst_converted} lattice diamond 3.55647766590118 Lattice spacing in x,y,z = 3.5564777 3.5564777 3.5564777 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (35.564777 35.564777 35.564777) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (35.564777 35.564777 35.564777) create_atoms CPU = 0.008 seconds variable mass_converted equal 12.0107*${_u_mass} variable mass_converted equal 12.0107*1 kim_interactions C WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions C #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_LeeLee_2005_C__MO_996970420049_000 pair_coeff * * C #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 12.0107 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 44984.2265010191 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 44984.2265010191/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 44984.2265010191/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 44984.2265010191/(1*1*${_u_distance}) variable V0_metal equal 44984.2265010191/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 44984.2265010191*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 44984.2265010191 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_996970420049_000#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.75 ghost atom cutoff = 4.75 binsize = 2.375, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.75 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.652 | 8.652 | 8.652 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -58656.897 -58656.897 -58960 -58960 293.15 293.15 44984.227 44984.227 7196.964 7196.964 1000 -58327.354 -58327.354 -58630.405 -58630.405 293.09993 293.09993 45275.238 45275.238 1980.7044 1980.7044 Loop time of 170.685 on 1 procs for 1000 steps with 8000 atoms Performance: 0.506 ns/day, 47.412 hours/ns, 5.859 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 168.91 | 168.91 | 168.91 | 0.0 | 98.96 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25326 | 0.25326 | 0.25326 | 0.0 | 0.15 Output | 0.00031543 | 0.00031543 | 0.00031543 | 0.0 | 0.00 Modify | 1.3554 | 1.3554 | 1.3554 | 0.0 | 0.79 Other | | 0.1673 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688000.0 ave 688000 max 688000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688000 Ave neighs/atom = 86.000000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.75 ghost atom cutoff = 4.75 binsize = 2.375, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.75 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.909 | 8.909 | 8.909 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -58327.354 -58327.354 -58630.405 -58630.405 293.09993 293.09993 45275.238 45275.238 1980.7044 1980.7044 2000 -58358.525 -58358.525 -58652.981 -58652.981 284.78647 284.78647 45288.184 45288.184 -1018.5956 -1018.5956 Loop time of 166.5 on 1 procs for 1000 steps with 8000 atoms Performance: 0.519 ns/day, 46.250 hours/ns, 6.006 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 164.79 | 164.79 | 164.79 | 0.0 | 98.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25367 | 0.25367 | 0.25367 | 0.0 | 0.15 Output | 0.00026645 | 0.00026645 | 0.00026645 | 0.0 | 0.00 Modify | 1.2974 | 1.2974 | 1.2974 | 0.0 | 0.78 Other | | 0.1616 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 687656.0 ave 687656 max 687656 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 687656 Ave neighs/atom = 85.957000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.75 ghost atom cutoff = 4.75 binsize = 2.375, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.75 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.909 | 8.909 | 8.909 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -58358.525 -58358.525 -58652.981 -58652.981 284.78647 284.78647 45288.184 45288.184 -1018.5956 -1018.5956 3000 -58345.617 -58345.617 -58648.989 -58648.989 293.4109 293.4109 45293.881 45293.881 -1006.3751 -1006.3751 Loop time of 166.776 on 1 procs for 1000 steps with 8000 atoms Performance: 0.518 ns/day, 46.327 hours/ns, 5.996 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 165.06 | 165.06 | 165.06 | 0.0 | 98.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25554 | 0.25554 | 0.25554 | 0.0 | 0.15 Output | 0.00026543 | 0.00026543 | 0.00026543 | 0.0 | 0.00 Modify | 1.2984 | 1.2984 | 1.2984 | 0.0 | 0.78 Other | | 0.1622 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 687756.0 ave 687756 max 687756 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 687756 Ave neighs/atom = 85.969500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.75 ghost atom cutoff = 4.75 binsize = 2.375, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.75 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.909 | 8.909 | 8.909 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -58345.617 -58345.617 -58648.989 -58648.989 293.4109 293.4109 45293.881 45293.881 -1006.3751 -1006.3751 4000 -58348.227 -58348.227 -58652.772 -58652.772 294.54503 294.54503 45280.908 45280.908 -5.3436054 -5.3436054 Loop time of 197.915 on 1 procs for 1000 steps with 8000 atoms Performance: 0.437 ns/day, 54.976 hours/ns, 5.053 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 195.71 | 195.71 | 195.71 | 0.0 | 98.88 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.29209 | 0.29209 | 0.29209 | 0.0 | 0.15 Output | 0.00034269 | 0.00034269 | 0.00034269 | 0.0 | 0.00 Modify | 1.7211 | 1.7211 | 1.7211 | 0.0 | 0.87 Other | | 0.1955 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 687740.0 ave 687740 max 687740 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 687740 Ave neighs/atom = 85.967500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.75 ghost atom cutoff = 4.75 binsize = 2.375, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.75 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.909 | 8.909 | 8.909 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -58348.227 -58348.227 -58652.772 -58652.772 294.54503 294.54503 45280.908 45280.908 -5.3436054 -5.3436054 5000 -58353.054 -58353.054 -58657.659 -58657.659 294.60305 294.60305 45255.57 45255.57 2129.8118 2129.8118 Loop time of 190.955 on 1 procs for 1000 steps with 8000 atoms Performance: 0.452 ns/day, 53.043 hours/ns, 5.237 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 188.92 | 188.92 | 188.92 | 0.0 | 98.94 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.28125 | 0.28125 | 0.28125 | 0.0 | 0.15 Output | 0.00023234 | 0.00023234 | 0.00023234 | 0.0 | 0.00 Modify | 1.564 | 1.564 | 1.564 | 0.0 | 0.82 Other | | 0.1848 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 687752.0 ave 687752 max 687752 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 687752 Ave neighs/atom = 85.969000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.764880199138, Press = -88.1976373716952 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.75 ghost atom cutoff = 4.75 binsize = 2.375, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.75 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.909 | 8.909 | 8.909 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -58353.054 -58353.054 -58657.659 -58657.659 294.60305 294.60305 45255.57 45255.57 2129.8118 2129.8118 6000 -58343.312 -58343.312 -58647.512 -58647.512 294.21078 294.21078 45256.379 45256.379 2631.0856 2631.0856 Loop time of 176.262 on 1 procs for 1000 steps with 8000 atoms Performance: 0.490 ns/day, 48.962 hours/ns, 5.673 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 174.4 | 174.4 | 174.4 | 0.0 | 98.94 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26342 | 0.26342 | 0.26342 | 0.0 | 0.15 Output | 0.00027078 | 0.00027078 | 0.00027078 | 0.0 | 0.00 Modify | 1.4268 | 1.4268 | 1.4268 | 0.0 | 0.81 Other | | 0.1708 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 687754.0 ave 687754 max 687754 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 687754 Ave neighs/atom = 85.969250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.778596539862, Press = -82.2530030296807 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.75 ghost atom cutoff = 4.75 binsize = 2.375, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.75 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.909 | 8.909 | 8.909 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -58343.312 -58343.312 -58647.512 -58647.512 294.21078 294.21078 45256.379 45256.379 2631.0856 2631.0856 7000 -58354.548 -58354.548 -58652.877 -58652.877 288.53296 288.53296 45296.748 45296.748 -1731.7501 -1731.7501 Loop time of 184.658 on 1 procs for 1000 steps with 8000 atoms Performance: 0.468 ns/day, 51.294 hours/ns, 5.415 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 182.63 | 182.63 | 182.63 | 0.0 | 98.90 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.27764 | 0.27764 | 0.27764 | 0.0 | 0.15 Output | 0.00022732 | 0.00022732 | 0.00022732 | 0.0 | 0.00 Modify | 1.5688 | 1.5688 | 1.5688 | 0.0 | 0.85 Other | | 0.1832 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 687766.0 ave 687766 max 687766 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 687766 Ave neighs/atom = 85.970750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.980363743212, Press = -58.8806050857558 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.75 ghost atom cutoff = 4.75 binsize = 2.375, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.75 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.909 | 8.909 | 8.909 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -58354.548 -58354.548 -58652.877 -58652.877 288.53296 288.53296 45296.748 45296.748 -1731.7501 -1731.7501 8000 -58345.16 -58345.16 -58649.522 -58649.522 294.36713 294.36713 45304.36 45304.36 -2065.1942 -2065.1942 Loop time of 169.354 on 1 procs for 1000 steps with 8000 atoms Performance: 0.510 ns/day, 47.043 hours/ns, 5.905 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 167.58 | 167.58 | 167.58 | 0.0 | 98.96 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25504 | 0.25504 | 0.25504 | 0.0 | 0.15 Output | 0.00022822 | 0.00022822 | 0.00022822 | 0.0 | 0.00 Modify | 1.3495 | 1.3495 | 1.3495 | 0.0 | 0.80 Other | | 0.1649 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 687722.0 ave 687722 max 687722 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 687722 Ave neighs/atom = 85.965250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.104942536936, Press = -10.6753913028363 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.75 ghost atom cutoff = 4.75 binsize = 2.375, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.75 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.909 | 8.909 | 8.909 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -58345.16 -58345.16 -58649.522 -58649.522 294.36713 294.36713 45304.36 45304.36 -2065.1942 -2065.1942 9000 -58350.582 -58350.582 -58655.274 -58655.274 294.68698 294.68698 45285.18 45285.18 -620.83094 -620.83094 Loop time of 197.268 on 1 procs for 1000 steps with 8000 atoms Performance: 0.438 ns/day, 54.797 hours/ns, 5.069 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 195.14 | 195.14 | 195.14 | 0.0 | 98.92 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.28219 | 0.28219 | 0.28219 | 0.0 | 0.14 Output | 0.0002351 | 0.0002351 | 0.0002351 | 0.0 | 0.00 Modify | 1.6586 | 1.6586 | 1.6586 | 0.0 | 0.84 Other | | 0.1894 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 687686.0 ave 687686 max 687686 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 687686 Ave neighs/atom = 85.960750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.026817264422, Press = -0.430051078771745 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.75 ghost atom cutoff = 4.75 binsize = 2.375, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.75 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.909 | 8.909 | 8.909 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -58350.582 -58350.582 -58655.274 -58655.274 294.68698 294.68698 45285.18 45285.18 -620.83094 -620.83094 10000 -58352.017 -58352.017 -58651.712 -58651.712 289.8538 289.8538 45267.111 45267.111 1315.8693 1315.8693 Loop time of 176.512 on 1 procs for 1000 steps with 8000 atoms Performance: 0.489 ns/day, 49.031 hours/ns, 5.665 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 174.65 | 174.65 | 174.65 | 0.0 | 98.95 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26261 | 0.26261 | 0.26261 | 0.0 | 0.15 Output | 0.00023052 | 0.00023052 | 0.00023052 | 0.0 | 0.00 Modify | 1.4255 | 1.4255 | 1.4255 | 0.0 | 0.81 Other | | 0.1692 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 687752.0 ave 687752 max 687752 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 687752 Ave neighs/atom = 85.969000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.123191741403, Press = -0.460908813074635 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.75 ghost atom cutoff = 4.75 binsize = 2.375, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.75 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.909 | 8.909 | 8.909 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -58352.017 -58352.017 -58651.712 -58651.712 289.8538 289.8538 45267.111 45267.111 1315.8693 1315.8693 11000 -58343.511 -58343.511 -58648.764 -58648.764 295.22934 295.22934 45262.215 45262.215 2061.226 2061.226 Loop time of 165.694 on 1 procs for 1000 steps with 8000 atoms Performance: 0.521 ns/day, 46.026 hours/ns, 6.035 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 163.96 | 163.96 | 163.96 | 0.0 | 98.95 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25305 | 0.25305 | 0.25305 | 0.0 | 0.15 Output | 0.00022851 | 0.00022851 | 0.00022851 | 0.0 | 0.00 Modify | 1.3184 | 1.3184 | 1.3184 | 0.0 | 0.80 Other | | 0.1613 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 687748.0 ave 687748 max 687748 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 687748 Ave neighs/atom = 85.968500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.08405569662, Press = -8.74242361708493 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.75 ghost atom cutoff = 4.75 binsize = 2.375, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.75 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.909 | 8.909 | 8.909 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -58343.511 -58343.511 -58648.764 -58648.764 295.22934 295.22934 45262.215 45262.215 2061.226 2061.226 12000 -58351.825 -58351.825 -58651.93 -58651.93 290.25066 290.25066 45283.302 45283.302 -314.50251 -314.50251 Loop time of 165.855 on 1 procs for 1000 steps with 8000 atoms Performance: 0.521 ns/day, 46.071 hours/ns, 6.029 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 164.12 | 164.12 | 164.12 | 0.0 | 98.95 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25378 | 0.25378 | 0.25378 | 0.0 | 0.15 Output | 0.00022833 | 0.00022833 | 0.00022833 | 0.0 | 0.00 Modify | 1.3211 | 1.3211 | 1.3211 | 0.0 | 0.80 Other | | 0.1608 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 687762.0 ave 687762 max 687762 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 687762 Ave neighs/atom = 85.970250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.200851448449, Press = -13.6418328059757 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.75 ghost atom cutoff = 4.75 binsize = 2.375, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.75 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.909 | 8.909 | 8.909 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -58351.825 -58351.825 -58651.93 -58651.93 290.25066 290.25066 45283.302 45283.302 -314.50251 -314.50251 13000 -58347.014 -58347.014 -58649.466 -58649.466 292.52081 292.52081 45314.999 45314.999 -3112.5047 -3112.5047 Loop time of 166.188 on 1 procs for 1000 steps with 8000 atoms Performance: 0.520 ns/day, 46.163 hours/ns, 6.017 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 164.45 | 164.45 | 164.45 | 0.0 | 98.95 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2508 | 0.2508 | 0.2508 | 0.0 | 0.15 Output | 0.00026627 | 0.00026627 | 0.00026627 | 0.0 | 0.00 Modify | 1.3255 | 1.3255 | 1.3255 | 0.0 | 0.80 Other | | 0.1608 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 687748.0 ave 687748 max 687748 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 687748 Ave neighs/atom = 85.968500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.292013091881, Press = -7.78296428815624 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.75 ghost atom cutoff = 4.75 binsize = 2.375, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.75 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.909 | 8.909 | 8.909 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -58347.014 -58347.014 -58649.466 -58649.466 292.52081 292.52081 45314.999 45314.999 -3112.5047 -3112.5047 14000 -58345.607 -58345.607 -58650.532 -58650.532 294.91306 294.91306 45303.885 45303.885 -2102.0881 -2102.0881 Loop time of 194.353 on 1 procs for 1000 steps with 8000 atoms Performance: 0.445 ns/day, 53.987 hours/ns, 5.145 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 192.27 | 192.27 | 192.27 | 0.0 | 98.93 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.28084 | 0.28084 | 0.28084 | 0.0 | 0.14 Output | 0.00027256 | 0.00027256 | 0.00027256 | 0.0 | 0.00 Modify | 1.6108 | 1.6108 | 1.6108 | 0.0 | 0.83 Other | | 0.1862 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 687722.0 ave 687722 max 687722 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 687722 Ave neighs/atom = 85.965250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.220166281016, Press = 2.72531162474359 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.75 ghost atom cutoff = 4.75 binsize = 2.375, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.75 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.909 | 8.909 | 8.909 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -58345.607 -58345.607 -58650.532 -58650.532 294.91306 294.91306 45303.885 45303.885 -2102.0881 -2102.0881 15000 -58356.709 -58356.709 -58655.565 -58655.565 289.04256 289.04256 45262.517 45262.517 1324.1386 1324.1386 Loop time of 188.61 on 1 procs for 1000 steps with 8000 atoms Performance: 0.458 ns/day, 52.392 hours/ns, 5.302 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 186.57 | 186.57 | 186.57 | 0.0 | 98.92 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.27524 | 0.27524 | 0.27524 | 0.0 | 0.15 Output | 0.00053592 | 0.00053592 | 0.00053592 | 0.0 | 0.00 Modify | 1.5805 | 1.5805 | 1.5805 | 0.0 | 0.84 Other | | 0.1823 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 687772.0 ave 687772 max 687772 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 687772 Ave neighs/atom = 85.971500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.173794702944, Press = 3.01820874336706 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.75 ghost atom cutoff = 4.75 binsize = 2.375, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.75 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.909 | 8.909 | 8.909 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -58356.709 -58356.709 -58655.565 -58655.565 289.04256 289.04256 45262.517 45262.517 1324.1386 1324.1386 16000 -58346.162 -58346.162 -58649.451 -58649.451 293.33 293.33 45260.494 45260.494 2225.0953 2225.0953 Loop time of 175.655 on 1 procs for 1000 steps with 8000 atoms Performance: 0.492 ns/day, 48.793 hours/ns, 5.693 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 173.79 | 173.79 | 173.79 | 0.0 | 98.94 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25875 | 0.25875 | 0.25875 | 0.0 | 0.15 Output | 0.00027701 | 0.00027701 | 0.00027701 | 0.0 | 0.00 Modify | 1.4297 | 1.4297 | 1.4297 | 0.0 | 0.81 Other | | 0.1719 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 687764.0 ave 687764 max 687764 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 687764 Ave neighs/atom = 85.970500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.081448857286, Press = -2.45376286025186 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.75 ghost atom cutoff = 4.75 binsize = 2.375, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.75 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.909 | 8.909 | 8.909 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -58346.162 -58346.162 -58649.451 -58649.451 293.33 293.33 45260.494 45260.494 2225.0953 2225.0953 17000 -58351.121 -58351.121 -58653.385 -58653.385 292.33835 292.33835 45274.351 45274.351 452.78078 452.78078 Loop time of 197.071 on 1 procs for 1000 steps with 8000 atoms Performance: 0.438 ns/day, 54.742 hours/ns, 5.074 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 194.91 | 194.91 | 194.91 | 0.0 | 98.90 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.28443 | 0.28443 | 0.28443 | 0.0 | 0.14 Output | 0.00027303 | 0.00027303 | 0.00027303 | 0.0 | 0.00 Modify | 1.6879 | 1.6879 | 1.6879 | 0.0 | 0.86 Other | | 0.1927 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 687764.0 ave 687764 max 687764 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 687764 Ave neighs/atom = 85.970500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.093026137042, Press = -5.43498124267146 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.75 ghost atom cutoff = 4.75 binsize = 2.375, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.75 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.909 | 8.909 | 8.909 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -58351.121 -58351.121 -58653.385 -58653.385 292.33835 292.33835 45274.351 45274.351 452.78078 452.78078 18000 -58347.163 -58347.163 -58653.146 -58653.146 295.93551 295.93551 45294.071 45294.071 -1344.0268 -1344.0268 Loop time of 196.326 on 1 procs for 1000 steps with 8000 atoms Performance: 0.440 ns/day, 54.535 hours/ns, 5.094 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 194.21 | 194.21 | 194.21 | 0.0 | 98.92 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.28254 | 0.28254 | 0.28254 | 0.0 | 0.14 Output | 0.00030489 | 0.00030489 | 0.00030489 | 0.0 | 0.00 Modify | 1.6498 | 1.6498 | 1.6498 | 0.0 | 0.84 Other | | 0.1878 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 687720.0 ave 687720 max 687720 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 687720 Ave neighs/atom = 85.965000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.207422551822, Press = -4.66019955273703 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 4.75 ghost atom cutoff = 4.75 binsize = 2.375, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 4.75 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.909 | 8.909 | 8.909 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -58347.163 -58347.163 -58653.146 -58653.146 295.93551 295.93551 45294.071 45294.071 -1344.0268 -1344.0268 19000 -58346.888 -58346.888 -58649.049 -58649.049 292.23867 292.23867 45311.08 45311.08 -2730.139 -2730.139 Loop time of 196.376 on 1 procs for 1000 steps with 8000 atoms Performance: 0.440 ns/day, 54.549 hours/ns, 5.092 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 194.26 | 194.26 | 194.26 | 0.0 | 98.92 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.28292 | 0.28292 | 0.28292 | 0.0 | 0.14 Output | 0.00031374 | 0.00031374 | 0.00031374 | 0.0 | 0.00 Modify | 1.6458 | 1.6458 | 1.6458 | 0.0 | 0.84 Other | | 0.1883 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 687748.0 ave 687748 max 687748 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 687748 Ave neighs/atom = 85.968500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 45280.4803452498 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0