# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 3.390116661787033*${_u_distance} variable latticeconst_converted equal 3.390116661787033*1 lattice bcc ${latticeconst_converted} lattice bcc 3.39011666178703 Lattice spacing in x,y,z = 3.39012 3.39012 3.39012 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (33.9012 33.9012 33.9012) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 2000 atoms create_atoms CPU = 0.000255108 secs variable mass_converted equal 95.94*${_u_mass} variable mass_converted equal 95.94*1 # specify which KIM Model to use pair_style kim LJ_ElliottAkerson_2015_Universal__MO_959249795837_003 pair_coeff * * Mo mass 1 ${mass_converted} mass 1 95.94 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 38962.2412051832 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 38962.2412051832/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 38962.2412051832/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 38962.2412051832/(1*1*${_u_distance}) variable V0_metal equal 38962.2412051832/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 38962.2412051832*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 38962.2412051832 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 20.5307 ghost atom cutoff = 20.5307 binsize = 10.2653, bins = 4 4 4 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 20.5307 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -71165.535 -71165.535 -71241.282 -71241.282 293.15 293.15 38962.241 38962.241 2075.7977 2075.7977 1000 -72563.003 -72563.003 -72641.486 -72641.486 303.73447 303.73447 38639.904 38639.904 -3632.6061 -3632.6061 Loop time of 30.6325 on 1 procs for 1000 steps with 2000 atoms Performance: 2.821 ns/day, 8.509 hours/ns, 32.645 timesteps/s 55.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.661 | 29.661 | 29.661 | 0.0 | 96.83 Neigh | 0.54862 | 0.54862 | 0.54862 | 0.0 | 1.79 Comm | 0.13491 | 0.13491 | 0.13491 | 0.0 | 0.44 Output | 3.6955e-05 | 3.6955e-05 | 3.6955e-05 | 0.0 | 0.00 Modify | 0.2072 | 0.2072 | 0.2072 | 0.0 | 0.68 Other | | 0.08065 | | | 0.26 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19801 ave 19801 max 19801 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.7561e+06 ave 3.7561e+06 max 3.7561e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3756102 Ave neighs/atom = 1878.05 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -72563.003 -72563.003 -72641.486 -72641.486 303.73447 303.73447 38639.904 38639.904 -3632.6061 -3632.6061 2000 -72566.17 -72566.17 -72643.653 -72643.653 299.86634 299.86634 38635.267 38635.267 -2373.3176 -2373.3176 Loop time of 29.9115 on 1 procs for 1000 steps with 2000 atoms Performance: 2.889 ns/day, 8.309 hours/ns, 33.432 timesteps/s 56.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 29.524 | 29.524 | 29.524 | 0.0 | 98.70 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24076 | 0.24076 | 0.24076 | 0.0 | 0.80 Output | 3.3855e-05 | 3.3855e-05 | 3.3855e-05 | 0.0 | 0.00 Modify | 0.10681 | 0.10681 | 0.10681 | 0.0 | 0.36 Other | | 0.03996 | | | 0.13 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19810 ave 19810 max 19810 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76031e+06 ave 3.76031e+06 max 3.76031e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3760306 Ave neighs/atom = 1880.15 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -72566.17 -72566.17 -72643.653 -72643.653 299.86634 299.86634 38635.267 38635.267 -2373.3176 -2373.3176 3000 -72573.726 -72573.726 -72649.791 -72649.791 294.37685 294.37685 38615.127 38615.127 9037.3141 9037.3141 Loop time of 27.4928 on 1 procs for 1000 steps with 2000 atoms Performance: 3.143 ns/day, 7.637 hours/ns, 36.373 timesteps/s 61.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 27.056 | 27.056 | 27.056 | 0.0 | 98.41 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.18995 | 0.18995 | 0.18995 | 0.0 | 0.69 Output | 5.1975e-05 | 5.1975e-05 | 5.1975e-05 | 0.0 | 0.00 Modify | 0.14659 | 0.14659 | 0.14659 | 0.0 | 0.53 Other | | 0.09978 | | | 0.36 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19778 ave 19778 max 19778 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.7621e+06 ave 3.7621e+06 max 3.7621e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3762100 Ave neighs/atom = 1881.05 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -72573.726 -72573.726 -72649.791 -72649.791 294.37685 294.37685 38615.127 38615.127 9037.3141 9037.3141 4000 -72570.617 -72570.617 -72643.916 -72643.916 283.67393 283.67393 38624.231 38624.231 5041.5351 5041.5351 Loop time of 28.7216 on 1 procs for 1000 steps with 2000 atoms Performance: 3.008 ns/day, 7.978 hours/ns, 34.817 timesteps/s 57.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 28.342 | 28.342 | 28.342 | 0.0 | 98.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.16925 | 0.16925 | 0.16925 | 0.0 | 0.59 Output | 4.7922e-05 | 4.7922e-05 | 4.7922e-05 | 0.0 | 0.00 Modify | 0.17077 | 0.17077 | 0.17077 | 0.0 | 0.59 Other | | 0.03967 | | | 0.14 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19814 ave 19814 max 19814 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76282e+06 ave 3.76282e+06 max 3.76282e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3762820 Ave neighs/atom = 1881.41 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -72570.617 -72570.617 -72643.916 -72643.916 283.67393 283.67393 38624.231 38624.231 5041.5351 5041.5351 5000 -72574.711 -72574.711 -72648.644 -72648.644 286.12885 286.12885 38634.74 38634.74 -3465.4709 -3465.4709 Loop time of 26.7159 on 1 procs for 1000 steps with 2000 atoms Performance: 3.234 ns/day, 7.421 hours/ns, 37.431 timesteps/s 62.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 26.233 | 26.233 | 26.233 | 0.0 | 98.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2801 | 0.2801 | 0.2801 | 0.0 | 1.05 Output | 2.2888e-05 | 2.2888e-05 | 2.2888e-05 | 0.0 | 0.00 Modify | 0.16279 | 0.16279 | 0.16279 | 0.0 | 0.61 Other | | 0.03964 | | | 0.15 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19826 ave 19826 max 19826 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76191e+06 ave 3.76191e+06 max 3.76191e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3761906 Ave neighs/atom = 1880.95 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 281.185481089574, Press = 72.5214321303821 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -72574.711 -72574.711 -72648.644 -72648.644 286.12885 286.12885 38634.74 38634.74 -3465.4709 -3465.4709 6000 -72567.302 -72567.302 -72640.775 -72640.775 284.34804 284.34804 38658.478 38658.478 -15627.463 -15627.463 Loop time of 30.5608 on 1 procs for 1000 steps with 2000 atoms Performance: 2.827 ns/day, 8.489 hours/ns, 32.722 timesteps/s 54.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.202 | 30.202 | 30.202 | 0.0 | 98.82 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22983 | 0.22983 | 0.22983 | 0.0 | 0.75 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.1094 | 0.1094 | 0.1094 | 0.0 | 0.36 Other | | 0.01983 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19847 ave 19847 max 19847 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76085e+06 ave 3.76085e+06 max 3.76085e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3760848 Ave neighs/atom = 1880.42 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 291.771319153556, Press = -46.9530609182267 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -72567.302 -72567.302 -72640.775 -72640.775 284.34804 284.34804 38658.478 38658.478 -15627.463 -15627.463 7000 -72572.974 -72572.974 -72645.964 -72645.964 282.47984 282.47984 38637.698 38637.698 -3452.6472 -3452.6472 Loop time of 35.7021 on 1 procs for 1000 steps with 2000 atoms Performance: 2.420 ns/day, 9.917 hours/ns, 28.010 timesteps/s 47.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.294 | 35.294 | 35.294 | 0.0 | 98.86 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.18991 | 0.18991 | 0.18991 | 0.0 | 0.53 Output | 4.22e-05 | 4.22e-05 | 4.22e-05 | 0.0 | 0.00 Modify | 0.19842 | 0.19842 | 0.19842 | 0.0 | 0.56 Other | | 0.0197 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19824 ave 19824 max 19824 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.75894e+06 ave 3.75894e+06 max 3.75894e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3758936 Ave neighs/atom = 1879.47 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.325489456819, Press = 17.9821215648569 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -72572.974 -72572.974 -72645.964 -72645.964 282.47984 282.47984 38637.698 38637.698 -3452.6472 -3452.6472 8000 -72569.289 -72569.289 -72645.034 -72645.034 293.14083 293.14083 38622.521 38622.521 5869.3371 5869.3371 Loop time of 35.6823 on 1 procs for 1000 steps with 2000 atoms Performance: 2.421 ns/day, 9.912 hours/ns, 28.025 timesteps/s 47.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.282 | 35.282 | 35.282 | 0.0 | 98.88 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19184 | 0.19184 | 0.19184 | 0.0 | 0.54 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.16845 | 0.16845 | 0.16845 | 0.0 | 0.47 Other | | 0.03993 | | | 0.11 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19811 ave 19811 max 19811 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76034e+06 ave 3.76034e+06 max 3.76034e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3760342 Ave neighs/atom = 1880.17 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.88704096308, Press = 16.957748434772 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -72569.289 -72569.289 -72645.034 -72645.034 293.14083 293.14083 38622.521 38622.521 5869.3371 5869.3371 9000 -72569.91 -72569.91 -72645.519 -72645.519 292.61331 292.61331 38633.186 38633.186 -631.83096 -631.83096 Loop time of 41.1065 on 1 procs for 1000 steps with 2000 atoms Performance: 2.102 ns/day, 11.418 hours/ns, 24.327 timesteps/s 41.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.696 | 40.696 | 40.696 | 0.0 | 99.00 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25441 | 0.25441 | 0.25441 | 0.0 | 0.62 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.1367 | 0.1367 | 0.1367 | 0.0 | 0.33 Other | | 0.01954 | | | 0.05 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19820 ave 19820 max 19820 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.7613e+06 ave 3.7613e+06 max 3.7613e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3761296 Ave neighs/atom = 1880.65 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.73125161871, Press = -0.3237606415648 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -72569.91 -72569.91 -72645.519 -72645.519 292.61331 292.61331 38633.186 38633.186 -631.83096 -631.83096 10000 -72571.803 -72571.803 -72648.765 -72648.765 297.85331 297.85331 38640.954 38640.954 -6650.8979 -6650.8979 Loop time of 42.5911 on 1 procs for 1000 steps with 2000 atoms Performance: 2.029 ns/day, 11.831 hours/ns, 23.479 timesteps/s 39.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.155 | 42.155 | 42.155 | 0.0 | 98.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17023 | 0.17023 | 0.17023 | 0.0 | 0.40 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.2462 | 0.2462 | 0.2462 | 0.0 | 0.58 Other | | 0.01961 | | | 0.05 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19816 ave 19816 max 19816 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76087e+06 ave 3.76087e+06 max 3.76087e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3760870 Ave neighs/atom = 1880.43 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.007488537461, Press = 4.13438030954447 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -72571.803 -72571.803 -72648.765 -72648.765 297.85331 297.85331 38640.954 38640.954 -6650.8979 -6650.8979 11000 -72567.284 -72567.284 -72645.058 -72645.058 300.99529 300.99529 38630.294 38630.294 1992.6375 1992.6375 Loop time of 44.9073 on 1 procs for 1000 steps with 2000 atoms Performance: 1.924 ns/day, 12.474 hours/ns, 22.268 timesteps/s 37.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.232 | 44.232 | 44.232 | 0.0 | 98.50 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.30866 | 0.30866 | 0.30866 | 0.0 | 0.69 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.2653 | 0.2653 | 0.2653 | 0.0 | 0.59 Other | | 0.101 | | | 0.22 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19822 ave 19822 max 19822 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76053e+06 ave 3.76053e+06 max 3.76053e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3760526 Ave neighs/atom = 1880.26 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.926557174066, Press = 7.81464267937468 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -72567.284 -72567.284 -72645.058 -72645.058 300.99529 300.99529 38630.294 38630.294 1992.6375 1992.6375 12000 -72572.557 -72572.557 -72646.05 -72646.05 284.42629 284.42629 38620.836 38620.836 7451.4577 7451.4577 Loop time of 49.1333 on 1 procs for 1000 steps with 2000 atoms Performance: 1.758 ns/day, 13.648 hours/ns, 20.353 timesteps/s 34.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.459 | 48.459 | 48.459 | 0.0 | 98.63 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.29083 | 0.29083 | 0.29083 | 0.0 | 0.59 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.28364 | 0.28364 | 0.28364 | 0.0 | 0.58 Other | | 0.09976 | | | 0.20 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19812 ave 19812 max 19812 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76161e+06 ave 3.76161e+06 max 3.76161e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3761612 Ave neighs/atom = 1880.81 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.97710237463, Press = 10.1446496595344 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -72572.557 -72572.557 -72646.05 -72646.05 284.42629 284.42629 38620.836 38620.836 7451.4577 7451.4577 13000 -72567.805 -72567.805 -72644.904 -72644.904 298.38066 298.38066 38634.598 38634.598 -960.0663 -960.0663 Loop time of 49.9593 on 1 procs for 1000 steps with 2000 atoms Performance: 1.729 ns/day, 13.878 hours/ns, 20.016 timesteps/s 33.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 49.342 | 49.342 | 49.342 | 0.0 | 98.76 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.31105 | 0.31105 | 0.31105 | 0.0 | 0.62 Output | 4.6968e-05 | 4.6968e-05 | 4.6968e-05 | 0.0 | 0.00 Modify | 0.26668 | 0.26668 | 0.26668 | 0.0 | 0.53 Other | | 0.03996 | | | 0.08 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19803 ave 19803 max 19803 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76264e+06 ave 3.76264e+06 max 3.76264e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3762640 Ave neighs/atom = 1881.32 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.054034554539, Press = 3.93424124887692 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -72567.805 -72567.805 -72644.904 -72644.904 298.38066 298.38066 38634.598 38634.598 -960.0663 -960.0663 14000 -72570.878 -72570.878 -72645.253 -72645.253 287.83943 287.83943 38642.217 38642.217 -6116.1148 -6116.1148 Loop time of 47.7324 on 1 procs for 1000 steps with 2000 atoms Performance: 1.810 ns/day, 13.259 hours/ns, 20.950 timesteps/s 35.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.236 | 47.236 | 47.236 | 0.0 | 98.96 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23071 | 0.23071 | 0.23071 | 0.0 | 0.48 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.20609 | 0.20609 | 0.20609 | 0.0 | 0.43 Other | | 0.05963 | | | 0.12 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19820 ave 19820 max 19820 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76079e+06 ave 3.76079e+06 max 3.76079e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3760786 Ave neighs/atom = 1880.39 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.974114263705, Press = 2.19388206915689 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -72570.878 -72570.878 -72645.253 -72645.253 287.83943 287.83943 38642.217 38642.217 -6116.1148 -6116.1148 15000 -72570.535 -72570.535 -72646.812 -72646.812 295.1986 295.1986 38626.502 38626.502 3453.7189 3453.7189 Loop time of 45.569 on 1 procs for 1000 steps with 2000 atoms Performance: 1.896 ns/day, 12.658 hours/ns, 21.945 timesteps/s 37.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.954 | 44.954 | 44.954 | 0.0 | 98.65 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26996 | 0.26996 | 0.26996 | 0.0 | 0.59 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.28552 | 0.28552 | 0.28552 | 0.0 | 0.63 Other | | 0.05976 | | | 0.13 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19798 ave 19798 max 19798 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76013e+06 ave 3.76013e+06 max 3.76013e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3760134 Ave neighs/atom = 1880.07 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.08318603301, Press = 9.05040877216838 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -72570.535 -72570.535 -72646.812 -72646.812 295.1986 295.1986 38626.502 38626.502 3453.7189 3453.7189 16000 -72568.179 -72568.179 -72645.743 -72645.743 300.18367 300.18367 38628.019 38628.019 3111.3636 3111.3636 Loop time of 41.2276 on 1 procs for 1000 steps with 2000 atoms Performance: 2.096 ns/day, 11.452 hours/ns, 24.256 timesteps/s 40.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.672 | 40.672 | 40.672 | 0.0 | 98.65 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2297 | 0.2297 | 0.2297 | 0.0 | 0.56 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.28619 | 0.28619 | 0.28619 | 0.0 | 0.69 Other | | 0.03947 | | | 0.10 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19810 ave 19810 max 19810 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.761e+06 ave 3.761e+06 max 3.761e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3760996 Ave neighs/atom = 1880.5 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.014916861625, Press = 4.0671275003537 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -72568.179 -72568.179 -72645.743 -72645.743 300.18367 300.18367 38628.019 38628.019 3111.3636 3111.3636 17000 -72572.398 -72572.398 -72645.439 -72645.439 282.67419 282.67419 38637.194 38637.194 -2598.1702 -2598.1702 Loop time of 38.1399 on 1 procs for 1000 steps with 2000 atoms Performance: 2.265 ns/day, 10.594 hours/ns, 26.219 timesteps/s 44.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.725 | 37.725 | 37.725 | 0.0 | 98.91 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1895 | 0.1895 | 0.1895 | 0.0 | 0.50 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.18537 | 0.18537 | 0.18537 | 0.0 | 0.49 Other | | 0.03952 | | | 0.10 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19819 ave 19819 max 19819 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76143e+06 ave 3.76143e+06 max 3.76143e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3761430 Ave neighs/atom = 1880.71 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.066483549644, Press = 1.59434233981988 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -72572.398 -72572.398 -72645.439 -72645.439 282.67419 282.67419 38637.194 38637.194 -2598.1702 -2598.1702 18000 -72567.393 -72567.393 -72643.019 -72643.019 292.67905 292.67905 38637.989 38637.989 -3277.5571 -3277.5571 Loop time of 37.7954 on 1 procs for 1000 steps with 2000 atoms Performance: 2.286 ns/day, 10.499 hours/ns, 26.458 timesteps/s 45.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.299 | 37.299 | 37.299 | 0.0 | 98.69 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2503 | 0.2503 | 0.2503 | 0.0 | 0.66 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.20643 | 0.20643 | 0.20643 | 0.0 | 0.55 Other | | 0.03977 | | | 0.11 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19812 ave 19812 max 19812 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.75963e+06 ave 3.75963e+06 max 3.75963e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3759632 Ave neighs/atom = 1879.82 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.071488034112, Press = 1.81380892309192 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -72567.393 -72567.393 -72643.019 -72643.019 292.67905 292.67905 38637.989 38637.989 -3277.5571 -3277.5571 19000 -72571.664 -72571.664 -72646.492 -72646.492 289.59418 289.59418 38619.357 38619.357 7921.5602 7921.5602 Loop time of 39.591 on 1 procs for 1000 steps with 2000 atoms Performance: 2.182 ns/day, 10.998 hours/ns, 25.258 timesteps/s 42.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.112 | 39.112 | 39.112 | 0.0 | 98.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.26196 | 0.26196 | 0.26196 | 0.0 | 0.66 Output | 2.2888e-05 | 2.2888e-05 | 2.2888e-05 | 0.0 | 0.00 Modify | 0.19689 | 0.19689 | 0.19689 | 0.0 | 0.50 Other | | 0.0199 | | | 0.05 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19802 ave 19802 max 19802 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76016e+06 ave 3.76016e+06 max 3.76016e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3760160 Ave neighs/atom = 1880.08 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.048341659998, Press = 6.07823317029713 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -72571.664 -72571.664 -72646.492 -72646.492 289.59418 289.59418 38619.357 38619.357 7921.5602 7921.5602 20000 -72569.441 -72569.441 -72643.178 -72643.178 285.37091 285.37091 38622.278 38622.278 7259.3126 7259.3126 Loop time of 39.6375 on 1 procs for 1000 steps with 2000 atoms Performance: 2.180 ns/day, 11.010 hours/ns, 25.229 timesteps/s 42.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 39.103 | 39.103 | 39.103 | 0.0 | 98.65 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.28903 | 0.28903 | 0.28903 | 0.0 | 0.73 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.16607 | 0.16607 | 0.16607 | 0.0 | 0.42 Other | | 0.07948 | | | 0.20 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19808 ave 19808 max 19808 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76148e+06 ave 3.76148e+06 max 3.76148e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3761478 Ave neighs/atom = 1880.74 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.104631450308, Press = 2.27277103973758 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -72569.441 -72569.441 -72643.178 -72643.178 285.37091 285.37091 38622.278 38622.278 7259.3126 7259.3126 21000 -72569.195 -72569.195 -72643.483 -72643.483 287.50377 287.50377 38631.274 38631.274 1229.2374 1229.2374 Loop time of 39.265 on 1 procs for 1000 steps with 2000 atoms Performance: 2.200 ns/day, 10.907 hours/ns, 25.468 timesteps/s 43.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.771 | 38.771 | 38.771 | 0.0 | 98.74 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.30743 | 0.30743 | 0.30743 | 0.0 | 0.78 Output | 2.1935e-05 | 2.1935e-05 | 2.1935e-05 | 0.0 | 0.00 Modify | 0.16628 | 0.16628 | 0.16628 | 0.0 | 0.42 Other | | 0.01987 | | | 0.05 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19802 ave 19802 max 19802 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76185e+06 ave 3.76185e+06 max 3.76185e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3761848 Ave neighs/atom = 1880.92 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.052500680225, Press = 1.06444126350146 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -72569.195 -72569.195 -72643.483 -72643.483 287.50377 287.50377 38631.274 38631.274 1229.2374 1229.2374 22000 -72571.78 -72571.78 -72643.755 -72643.755 278.55248 278.55248 38634.961 38634.961 -1428.3621 -1428.3621 Loop time of 38.2391 on 1 procs for 1000 steps with 2000 atoms Performance: 2.259 ns/day, 10.622 hours/ns, 26.151 timesteps/s 44.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 37.775 | 37.775 | 37.775 | 0.0 | 98.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22977 | 0.22977 | 0.22977 | 0.0 | 0.60 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.19521 | 0.19521 | 0.19521 | 0.0 | 0.51 Other | | 0.03952 | | | 0.10 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19830 ave 19830 max 19830 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76132e+06 ave 3.76132e+06 max 3.76132e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3761316 Ave neighs/atom = 1880.66 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.095356498533, Press = 1.84587472500504 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -72571.78 -72571.78 -72643.755 -72643.755 278.55248 278.55248 38634.961 38634.961 -1428.3621 -1428.3621 23000 -72567.563 -72567.563 -72646.038 -72646.038 303.70713 303.70713 38628.782 38628.782 1898.4086 1898.4086 Loop time of 38.487 on 1 procs for 1000 steps with 2000 atoms Performance: 2.245 ns/day, 10.691 hours/ns, 25.983 timesteps/s 43.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.012 | 38.012 | 38.012 | 0.0 | 98.76 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20984 | 0.20984 | 0.20984 | 0.0 | 0.55 Output | 2.7895e-05 | 2.7895e-05 | 2.7895e-05 | 0.0 | 0.00 Modify | 0.2058 | 0.2058 | 0.2058 | 0.0 | 0.53 Other | | 0.05966 | | | 0.16 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19831 ave 19831 max 19831 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76048e+06 ave 3.76048e+06 max 3.76048e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3760480 Ave neighs/atom = 1880.24 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.084385109686, Press = 4.0802762799719 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -72567.563 -72567.563 -72646.038 -72646.038 303.70713 303.70713 38628.782 38628.782 1898.4086 1898.4086 24000 -72572.021 -72572.021 -72648.467 -72648.467 295.85224 295.85224 38629.893 38629.893 1073.4651 1073.4651 Loop time of 38.9079 on 1 procs for 1000 steps with 2000 atoms Performance: 2.221 ns/day, 10.808 hours/ns, 25.702 timesteps/s 43.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.402 | 38.402 | 38.402 | 0.0 | 98.70 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2601 | 0.2601 | 0.2601 | 0.0 | 0.67 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.20597 | 0.20597 | 0.20597 | 0.0 | 0.53 Other | | 0.03999 | | | 0.10 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19816 ave 19816 max 19816 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76128e+06 ave 3.76128e+06 max 3.76128e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3761278 Ave neighs/atom = 1880.64 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.083895824615, Press = 1.64395812276534 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -72572.021 -72572.021 -72648.467 -72648.467 295.85224 295.85224 38629.893 38629.893 1073.4651 1073.4651 25000 -72568.631 -72568.631 -72644.008 -72644.008 291.71613 291.71613 38625.748 38625.748 4753.3345 4753.3345 Loop time of 37.2464 on 1 procs for 1000 steps with 2000 atoms Performance: 2.320 ns/day, 10.346 hours/ns, 26.848 timesteps/s 45.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 36.79 | 36.79 | 36.79 | 0.0 | 98.77 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21266 | 0.21266 | 0.21266 | 0.0 | 0.57 Output | 2.9087e-05 | 2.9087e-05 | 2.9087e-05 | 0.0 | 0.00 Modify | 0.20437 | 0.20437 | 0.20437 | 0.0 | 0.55 Other | | 0.03977 | | | 0.11 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19806 ave 19806 max 19806 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76084e+06 ave 3.76084e+06 max 3.76084e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3760836 Ave neighs/atom = 1880.42 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.108106737249, Press = 3.30653769257108 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -72568.631 -72568.631 -72644.008 -72644.008 291.71613 291.71613 38625.748 38625.748 4753.3345 4753.3345 26000 -72570.076 -72570.076 -72646.385 -72646.385 295.32209 295.32209 38621.68 38621.68 6562.8841 6562.8841 Loop time of 35.9105 on 1 procs for 1000 steps with 2000 atoms Performance: 2.406 ns/day, 9.975 hours/ns, 27.847 timesteps/s 47.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 35.575 | 35.575 | 35.575 | 0.0 | 99.07 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20012 | 0.20012 | 0.20012 | 0.0 | 0.56 Output | 2.1935e-05 | 2.1935e-05 | 2.1935e-05 | 0.0 | 0.00 Modify | 0.11603 | 0.11603 | 0.11603 | 0.0 | 0.32 Other | | 0.01954 | | | 0.05 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19812 ave 19812 max 19812 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76102e+06 ave 3.76102e+06 max 3.76102e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3761022 Ave neighs/atom = 1880.51 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.077686464538, Press = 3.02363739481567 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 26000 -72570.076 -72570.076 -72646.385 -72646.385 295.32209 295.32209 38621.68 38621.68 6562.8841 6562.8841 27000 -72571.167 -72571.167 -72645.06 -72645.06 285.97245 285.97245 38630.557 38630.557 1315.2786 1315.2786 Loop time of 34.0085 on 1 procs for 1000 steps with 2000 atoms Performance: 2.541 ns/day, 9.447 hours/ns, 29.404 timesteps/s 49.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 33.561 | 33.561 | 33.561 | 0.0 | 98.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25989 | 0.25989 | 0.25989 | 0.0 | 0.76 Output | 2.8849e-05 | 2.8849e-05 | 2.8849e-05 | 0.0 | 0.00 Modify | 0.16796 | 0.16796 | 0.16796 | 0.0 | 0.49 Other | | 0.01986 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19808 ave 19808 max 19808 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76249e+06 ave 3.76249e+06 max 3.76249e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3762490 Ave neighs/atom = 1881.24 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.116862935965, Press = 1.6081390812579 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 27000 -72571.167 -72571.167 -72645.06 -72645.06 285.97245 285.97245 38630.557 38630.557 1315.2786 1315.2786 28000 -72568.934 -72568.934 -72644.983 -72644.983 294.31609 294.31609 38624.985 38624.985 4492.497 4492.497 Loop time of 31.7699 on 1 procs for 1000 steps with 2000 atoms Performance: 2.720 ns/day, 8.825 hours/ns, 31.476 timesteps/s 53.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 31.354 | 31.354 | 31.354 | 0.0 | 98.69 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.27001 | 0.27001 | 0.27001 | 0.0 | 0.85 Output | 2.8133e-05 | 2.8133e-05 | 2.8133e-05 | 0.0 | 0.00 Modify | 0.12581 | 0.12581 | 0.12581 | 0.0 | 0.40 Other | | 0.0198 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19810 ave 19810 max 19810 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.761e+06 ave 3.761e+06 max 3.761e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3760996 Ave neighs/atom = 1880.5 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.078230795452, Press = 0.904528047860965 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 20.81 | 20.81 | 20.81 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 28000 -72568.934 -72568.934 -72644.983 -72644.983 294.31609 294.31609 38624.985 38624.985 4492.497 4492.497 29000 -72573.305 -72573.305 -72647.916 -72647.916 288.75263 288.75263 38633.557 38633.557 -1659.981 -1659.981 Loop time of 30.997 on 1 procs for 1000 steps with 2000 atoms Performance: 2.787 ns/day, 8.610 hours/ns, 32.261 timesteps/s 54.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 30.501 | 30.501 | 30.501 | 0.0 | 98.40 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.30985 | 0.30985 | 0.30985 | 0.0 | 1.00 Output | 2.6941e-05 | 2.6941e-05 | 2.6941e-05 | 0.0 | 0.00 Modify | 0.16607 | 0.16607 | 0.16607 | 0.0 | 0.54 Other | | 0.01975 | | | 0.06 Nlocal: 2000 ave 2000 max 2000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 19798 ave 19798 max 19798 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 3.76155e+06 ave 3.76155e+06 max 3.76155e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 3761552 Ave neighs/atom = 1880.78 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 38632.4156639087 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0