-------------------------------------------------------------------------- By default, for Open MPI 4.0 and later, infiniband ports on a device are not used by default. The intent is to use UCX for these devices. You can override this policy by setting the btl_openib_allow_ib MCA parameter to true. Local host: c402-002 Local adapter: hfi1_0 Local port: 1 -------------------------------------------------------------------------- -------------------------------------------------------------------------- WARNING: There was an error initializing an OpenFabrics device. Local host: c402-002 Local device: hfi1_0 -------------------------------------------------------------------------- Traceback (most recent call last): File "../../td/EquilibriumCrystalStructure__TD_457028483760_000/runner", line 202, in (libproto,shortname)=aflow.get_library_prototype_label_and_shortname(RELAX_POSCAR_PATH.format(i),shortnames) File "/work2/08773/bwaters/stampede2/bwaters/job-b976c2b2-4cf6-4798-8632-7dafa7639cb6-007-054bc7a7-5600-4217-9e3d-1f540c0fabc8/TE_713057851205_000-and-SM_333071728528_000-1683309682/staged_job_files/repository/td/EquilibriumCrystalStructure__TD_457028483760_000/util/aflow_util.py", line 382, in get_library_prototype_label_and_shortname comparison_results = self.compare_to_prototypes(poscar_file) File "/work2/08773/bwaters/stampede2/bwaters/job-b976c2b2-4cf6-4798-8632-7dafa7639cb6-007-054bc7a7-5600-4217-9e3d-1f540c0fabc8/TE_713057851205_000-and-SM_333071728528_000-1683309682/staged_job_files/repository/td/EquilibriumCrystalStructure__TD_457028483760_000/util/aflow_util.py", line 339, in compare_to_prototypes output = self.aflow_command([ File "/work2/08773/bwaters/stampede2/bwaters/job-b976c2b2-4cf6-4798-8632-7dafa7639cb6-007-054bc7a7-5600-4217-9e3d-1f540c0fabc8/TE_713057851205_000-and-SM_333071728528_000-1683309682/staged_job_files/repository/td/EquilibriumCrystalStructure__TD_457028483760_000/util/aflow_util.py", line 267, in aflow_command return subprocess.check_output(cmd_str, shell=True, stderr=subprocess.PIPE,encoding="utf-8") File "/usr/lib/python3.8/subprocess.py", line 415, in check_output return run(*popenargs, stdout=PIPE, timeout=timeout, check=True, File "/usr/lib/python3.8/subprocess.py", line 493, in run with Popen(*popenargs, **kwargs) as process: File "/usr/lib/python3.8/subprocess.py", line 858, in __init__ self._execute_child(args, executable, preexec_fn, close_fds, File "/usr/lib/python3.8/subprocess.py", line 1639, in _execute_child self.pid = _posixsubprocess.fork_exec( OSError: [Errno 12] Cannot allocate memory Command exited with non-zero status 1 {"realtime":41.62,"usertime":49.68,"systime":51.36,"memmax":147120,"memavg":0}