# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.152935631573201*${_u_distance} variable latticeconst_converted equal 5.152935631573201*1 lattice fcc ${latticeconst_converted} lattice fcc 5.1529356315732 Lattice spacing in x,y,z = 5.1529356 5.1529356 5.1529356 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (51.529356 51.529356 51.529356) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 4000 atoms using lattice units in orthogonal box = (0 0 0) to (51.529356 51.529356 51.529356) create_atoms CPU = 0.001 seconds variable mass_converted equal 140.116*${_u_mass} variable mass_converted equal 140.116*1 kim_interactions Ce WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Ce #=== BEGIN kim interactions ================================== variable kim_update equal 0 variable kim_periodic equal 1 pair_style reaxff NULL mincap 200 safezone 2 pair_coeff * * /tmp/kim-shared-library-parameter-file-directory-XXXXXXJILvBd/ReaxFF_HOSiCeNaCl.txt Ce WARNING: Van der Waals parameters for element SI indicate inner wall+shielding, but earlier atoms indicate a different van der Waals method. This may cause division-by-zero errors. Keeping van der Waals setting for earlier atoms. (src/REAXFF/reaxff_ffield.cpp:251) WARNING: Changed valency_val to valency_boc for X (src/REAXFF/reaxff_ffield.cpp:296) fix reaxqeq all qeq/reaxff 1 0.0 10.0 1.0e-6 reaxff #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 140.116 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 136824.58903756 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 136824.58903756/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 136824.58903756/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 136824.58903756/(1*1*${_u_distance}) variable V0_metal equal 136824.58903756/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 136824.58903756*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 136824.58903756 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1000 timestep ${timestep_converted} timestep 1 variable temp_converted equal 333.15*${_u_temperature} variable temp_converted equal 333.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1000 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*0.986923266716013 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1000 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 333.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 100 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 100 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 100 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 100 iso 0 0 1000 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/23.0605480120695 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/23.0605480120695 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/0.986923266716013 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "333.15 - 0.2" variable T_up equal "333.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/SM_282799919035_000#item-citation - pair reaxff command: @Article{Aktulga12, author = {H. M. Aktulga, J. C. Fogarty, S. A. Pandit, A. Y. Grama}, title = {Parallel reactive molecular dynamics: Numerical methods and algorithmic techniques}, journal = {Parallel Computing}, year = 2012, volume = 38, pages = {245--259} } - fix qeq/reaxff command: @Article{Aktulga12, author = {H. M. Aktulga, J. C. Fogarty, S. A. Pandit, A. Y. Grama}, title = {Parallel reactive molecular dynamics: Numerical methods and algorithmic techniques}, journal = {Parallel Computing}, year = 2012, volume = 38, pages = {245--259} } CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 4000, page size: 100000 master list distance cutoff = 12 ghost atom cutoff = 12 binsize = 6, bins = 9 9 9 2 neighbor lists, perpetual/occasional/extra = 2 0 0 (1) pair reaxff, perpetual attributes: half, newton off, ghost pair build: half/bin/newtoff/ghost stencil: full/ghost/bin/3d bin: standard (2) fix qeq/reaxff, perpetual, copy from (1) attributes: half, newton off pair build: copy stencil: none bin: none Per MPI rank memory allocation (min/avg/max) = 302 | 302 | 302 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -365266.86 -15839.47 -369238.09 -16011.679 333.15 333.15 136824.59 136824.59 1326.7841 1344.364 1000 -360610.89 -15637.568 -364874.39 -15822.451 357.66859 357.66859 158685.93 158685.93 483.82119 490.23182 Loop time of 165.841 on 1 procs for 1000 steps with 4000 atoms Performance: 0.521 ns/day, 46.067 hours/ns, 6.030 timesteps/s 99.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 148.6 | 148.6 | 148.6 | 0.0 | 89.60 Neigh | 0.31412 | 0.31412 | 0.31412 | 0.0 | 0.19 Comm | 0.039134 | 0.039134 | 0.039134 | 0.0 | 0.02 Output | 0.00014418 | 0.00014418 | 0.00014418 | 0.0 | 0.00 Modify | 16.87 | 16.87 | 16.87 | 0.0 | 10.17 Other | | 0.02162 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 454772 ave 454772 max 454772 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 454772 Ave neighs/atom = 113.693 Neighbor list builds = 7 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 301.1 | 301.1 | 301.1 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -360610.89 -15637.568 -364874.39 -15822.451 357.66859 357.66859 158685.93 158685.93 483.82119 490.23182 2000 -360983.71 -15653.735 -365041.99 -15829.719 340.45257 340.45257 159515.11 159515.11 595.81988 603.7145 Loop time of 145.012 on 1 procs for 1000 steps with 4000 atoms Performance: 0.596 ns/day, 40.281 hours/ns, 6.896 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 130.74 | 130.74 | 130.74 | 0.0 | 90.16 Neigh | 0.18953 | 0.18953 | 0.18953 | 0.0 | 0.13 Comm | 0.035724 | 0.035724 | 0.035724 | 0.0 | 0.02 Output | 9.3476e-05 | 9.3476e-05 | 9.3476e-05 | 0.0 | 0.00 Modify | 14.023 | 14.023 | 14.023 | 0.0 | 9.67 Other | | 0.0194 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 450589 ave 450589 max 450589 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 450589 Ave neighs/atom = 112.64725 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 301.1 | 301.1 | 301.1 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -360983.71 -15653.735 -365041.99 -15829.719 340.45257 340.45257 159515.11 159515.11 595.81988 603.7145 3000 -361476.55 -15675.107 -365406.12 -15845.509 329.65527 329.65527 160121.54 160121.54 -63.347037 -64.186385 Loop time of 144.22 on 1 procs for 1000 steps with 4000 atoms Performance: 0.599 ns/day, 40.061 hours/ns, 6.934 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 130.01 | 130.01 | 130.01 | 0.0 | 90.15 Neigh | 0.19015 | 0.19015 | 0.19015 | 0.0 | 0.13 Comm | 0.035731 | 0.035731 | 0.035731 | 0.0 | 0.02 Output | 9.2414e-05 | 9.2414e-05 | 9.2414e-05 | 0.0 | 0.00 Modify | 13.966 | 13.966 | 13.966 | 0.0 | 9.68 Other | | 0.01927 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 448599 ave 448599 max 448599 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 448599 Ave neighs/atom = 112.14975 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 301 | 301 | 301 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -361476.55 -15675.107 -365406.12 -15845.509 329.65527 329.65527 160121.54 160121.54 -63.347037 -64.186385 4000 -361502.44 -15676.229 -365356.5 -15843.357 323.32074 323.32074 160289.44 160289.44 55.907158 56.647928 Loop time of 144.209 on 1 procs for 1000 steps with 4000 atoms Performance: 0.599 ns/day, 40.058 hours/ns, 6.934 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 130.04 | 130.04 | 130.04 | 0.0 | 90.17 Neigh | 0.19065 | 0.19065 | 0.19065 | 0.0 | 0.13 Comm | 0.03585 | 0.03585 | 0.03585 | 0.0 | 0.02 Output | 8.9649e-05 | 8.9649e-05 | 8.9649e-05 | 0.0 | 0.00 Modify | 13.926 | 13.926 | 13.926 | 0.0 | 9.66 Other | | 0.01938 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 448614 ave 448614 max 448614 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 448614 Ave neighs/atom = 112.1535 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 301 | 301 | 301 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -361502.44 -15676.229 -365356.5 -15843.357 323.32074 323.32074 160289.44 160289.44 55.907158 56.647928 5000 -361314.22 -15668.067 -365308.05 -15841.256 335.046 335.046 160297.08 160297.08 54.633753 55.357651 Loop time of 144.117 on 1 procs for 1000 steps with 4000 atoms Performance: 0.600 ns/day, 40.033 hours/ns, 6.939 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 129.98 | 129.98 | 129.98 | 0.0 | 90.19 Neigh | 0.18963 | 0.18963 | 0.18963 | 0.0 | 0.13 Comm | 0.035734 | 0.035734 | 0.035734 | 0.0 | 0.02 Output | 5.7979e-05 | 5.7979e-05 | 5.7979e-05 | 0.0 | 0.00 Modify | 13.897 | 13.897 | 13.897 | 0.0 | 9.64 Other | | 0.01937 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 448094 ave 448094 max 448094 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 448094 Ave neighs/atom = 112.0235 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 334.373107756703, Press = 8.11982959509701 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 301 | 301 | 301 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -361314.22 -15668.067 -365308.05 -15841.256 335.046 335.046 160297.08 160297.08 54.633753 55.357651 6000 -361395.29 -15671.583 -365353.51 -15843.228 332.05824 332.05824 160371.44 160371.44 193.21668 195.7768 Loop time of 141.227 on 1 procs for 1000 steps with 4000 atoms Performance: 0.612 ns/day, 39.230 hours/ns, 7.081 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.3 | 127.3 | 127.3 | 0.0 | 90.14 Neigh | 0.18893 | 0.18893 | 0.18893 | 0.0 | 0.13 Comm | 0.033976 | 0.033976 | 0.033976 | 0.0 | 0.02 Output | 5.5564e-05 | 5.5564e-05 | 5.5564e-05 | 0.0 | 0.00 Modify | 13.686 | 13.686 | 13.686 | 0.0 | 9.69 Other | | 0.01662 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 447478 ave 447478 max 447478 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 447478 Ave neighs/atom = 111.8695 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.149865064261, Press = 7.46008383374731 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 301 | 301 | 301 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -361395.29 -15671.583 -365353.51 -15843.228 332.05824 332.05824 160371.44 160371.44 193.21668 195.7768 7000 -361342.22 -15669.281 -365315.05 -15841.56 333.28405 333.28405 160530.01 160530.01 57.076108 57.832366 Loop time of 140.969 on 1 procs for 1000 steps with 4000 atoms Performance: 0.613 ns/day, 39.158 hours/ns, 7.094 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.07 | 127.07 | 127.07 | 0.0 | 90.14 Neigh | 0.18888 | 0.18888 | 0.18888 | 0.0 | 0.13 Comm | 0.033864 | 0.033864 | 0.033864 | 0.0 | 0.02 Output | 5.4503e-05 | 5.4503e-05 | 5.4503e-05 | 0.0 | 0.00 Modify | 13.662 | 13.662 | 13.662 | 0.0 | 9.69 Other | | 0.01649 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 448132 ave 448132 max 448132 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 448132 Ave neighs/atom = 112.033 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.609293014343, Press = -4.00323173609744 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 301 | 301 | 301 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -361342.22 -15669.281 -365315.05 -15841.56 333.28405 333.28405 160530.01 160530.01 57.076108 57.832366 8000 -361257.56 -15665.61 -365262.22 -15839.269 335.95456 335.95456 160377.5 160377.5 410.65257 416.09372 Loop time of 141.018 on 1 procs for 1000 steps with 4000 atoms Performance: 0.613 ns/day, 39.172 hours/ns, 7.091 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.12 | 127.12 | 127.12 | 0.0 | 90.15 Neigh | 0.18911 | 0.18911 | 0.18911 | 0.0 | 0.13 Comm | 0.033892 | 0.033892 | 0.033892 | 0.0 | 0.02 Output | 6.1626e-05 | 6.1626e-05 | 6.1626e-05 | 0.0 | 0.00 Modify | 13.654 | 13.654 | 13.654 | 0.0 | 9.68 Other | | 0.01652 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 447870 ave 447870 max 447870 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 447870 Ave neighs/atom = 111.9675 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.113289358964, Press = 2.78747414059671 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 301 | 301 | 301 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -361257.56 -15665.61 -365262.22 -15839.269 335.95456 335.95456 160377.5 160377.5 410.65257 416.09372 9000 -361379.99 -15670.919 -365283.07 -15840.173 327.4326 327.4326 160470.01 160470.01 -333.27355 -337.68942 Loop time of 141.185 on 1 procs for 1000 steps with 4000 atoms Performance: 0.612 ns/day, 39.218 hours/ns, 7.083 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.27 | 127.27 | 127.27 | 0.0 | 90.15 Neigh | 0.18924 | 0.18924 | 0.18924 | 0.0 | 0.13 Comm | 0.033772 | 0.033772 | 0.033772 | 0.0 | 0.02 Output | 6.7928e-05 | 6.7928e-05 | 6.7928e-05 | 0.0 | 0.00 Modify | 13.671 | 13.671 | 13.671 | 0.0 | 9.68 Other | | 0.01665 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 447632 ave 447632 max 447632 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 447632 Ave neighs/atom = 111.908 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.381019946248, Press = 2.58554852034372 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 301 | 301 | 301 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -361379.99 -15670.919 -365283.07 -15840.173 327.4326 327.4326 160470.01 160470.01 -333.27355 -337.68942 10000 -361214.75 -15663.754 -365236.48 -15838.153 337.38621 337.38621 160316.9 160316.9 554.12656 561.46874 Loop time of 141.058 on 1 procs for 1000 steps with 4000 atoms Performance: 0.613 ns/day, 39.183 hours/ns, 7.089 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.16 | 127.16 | 127.16 | 0.0 | 90.15 Neigh | 0.18906 | 0.18906 | 0.18906 | 0.0 | 0.13 Comm | 0.033464 | 0.033464 | 0.033464 | 0.0 | 0.02 Output | 5.9382e-05 | 5.9382e-05 | 5.9382e-05 | 0.0 | 0.00 Modify | 13.66 | 13.66 | 13.66 | 0.0 | 9.68 Other | | 0.01651 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 447564 ave 447564 max 447564 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 447564 Ave neighs/atom = 111.891 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.1271835805, Press = 1.29643146513813 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 301 | 301 | 301 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -361214.75 -15663.754 -365236.48 -15838.153 337.38621 337.38621 160316.9 160316.9 554.12656 561.46874 11000 -361330.29 -15668.764 -365301.07 -15840.953 333.11196 333.11196 160393.13 160393.13 457.3635 463.42357 Loop time of 140.966 on 1 procs for 1000 steps with 4000 atoms Performance: 0.613 ns/day, 39.157 hours/ns, 7.094 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.08 | 127.08 | 127.08 | 0.0 | 90.15 Neigh | 0.1892 | 0.1892 | 0.1892 | 0.0 | 0.13 Comm | 0.033776 | 0.033776 | 0.033776 | 0.0 | 0.02 Output | 4.9704e-05 | 4.9704e-05 | 4.9704e-05 | 0.0 | 0.00 Modify | 13.642 | 13.642 | 13.642 | 0.0 | 9.68 Other | | 0.01656 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 447167 ave 447167 max 447167 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 447167 Ave neighs/atom = 111.79175 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.460838125743, Press = -3.33591404074436 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 301 | 301 | 301 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -361330.29 -15668.764 -365301.07 -15840.953 333.11196 333.11196 160393.13 160393.13 457.3635 463.42357 12000 -361308.63 -15667.825 -365359.53 -15843.489 339.83359 339.83359 160477.42 160477.42 225.57605 228.56494 Loop time of 140.886 on 1 procs for 1000 steps with 4000 atoms Performance: 0.613 ns/day, 39.135 hours/ns, 7.098 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.01 | 127.01 | 127.01 | 0.0 | 90.15 Neigh | 0.18889 | 0.18889 | 0.18889 | 0.0 | 0.13 Comm | 0.033821 | 0.033821 | 0.033821 | 0.0 | 0.02 Output | 6.1586e-05 | 6.1586e-05 | 6.1586e-05 | 0.0 | 0.00 Modify | 13.635 | 13.635 | 13.635 | 0.0 | 9.68 Other | | 0.01651 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 448202 ave 448202 max 448202 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 448202 Ave neighs/atom = 112.0505 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.484012440392, Press = 1.69153806695571 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 301 | 301 | 301 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -361308.63 -15667.825 -365359.53 -15843.489 339.83359 339.83359 160477.42 160477.42 225.57605 228.56494 13000 -361134.63 -15660.279 -365160.58 -15834.861 337.74008 337.74008 160462 160462 437.53908 443.33647 Loop time of 140.946 on 1 procs for 1000 steps with 4000 atoms Performance: 0.613 ns/day, 39.152 hours/ns, 7.095 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.03 | 127.03 | 127.03 | 0.0 | 90.12 Neigh | 0.18895 | 0.18895 | 0.18895 | 0.0 | 0.13 Comm | 0.033827 | 0.033827 | 0.033827 | 0.0 | 0.02 Output | 6.2167e-05 | 6.2167e-05 | 6.2167e-05 | 0.0 | 0.00 Modify | 13.681 | 13.681 | 13.681 | 0.0 | 9.71 Other | | 0.01649 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 447499 ave 447499 max 447499 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 447499 Ave neighs/atom = 111.87475 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.483483012272, Press = 1.29046460521128 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 301 | 301 | 301 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -361134.63 -15660.279 -365160.58 -15834.861 337.74008 337.74008 160462 160462 437.53908 443.33647 14000 -361340.82 -15669.221 -365328.5 -15842.143 334.53031 334.53031 160382.79 160382.79 628.69878 637.02904 Loop time of 140.79 on 1 procs for 1000 steps with 4000 atoms Performance: 0.614 ns/day, 39.108 hours/ns, 7.103 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 126.92 | 126.92 | 126.92 | 0.0 | 90.15 Neigh | 0.18913 | 0.18913 | 0.18913 | 0.0 | 0.13 Comm | 0.033798 | 0.033798 | 0.033798 | 0.0 | 0.02 Output | 5.9031e-05 | 5.9031e-05 | 5.9031e-05 | 0.0 | 0.00 Modify | 13.628 | 13.628 | 13.628 | 0.0 | 9.68 Other | | 0.01654 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 447670 ave 447670 max 447670 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 447670 Ave neighs/atom = 111.9175 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.335856006715, Press = 0.503833405048804 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 301 | 301 | 301 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -361340.82 -15669.221 -365328.5 -15842.143 334.53031 334.53031 160382.79 160382.79 628.69878 637.02904 15000 -361284.92 -15666.797 -365275.45 -15839.842 334.76884 334.76884 160604.25 160604.25 -920.65992 -932.85866 Loop time of 140.971 on 1 procs for 1000 steps with 4000 atoms Performance: 0.613 ns/day, 39.159 hours/ns, 7.094 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.06 | 127.06 | 127.06 | 0.0 | 90.13 Neigh | 0.18931 | 0.18931 | 0.18931 | 0.0 | 0.13 Comm | 0.033847 | 0.033847 | 0.033847 | 0.0 | 0.02 Output | 5.5645e-05 | 5.5645e-05 | 5.5645e-05 | 0.0 | 0.00 Modify | 13.671 | 13.671 | 13.671 | 0.0 | 9.70 Other | | 0.01659 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 448019 ave 448019 max 448019 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 448019 Ave neighs/atom = 112.00475 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.427900588063, Press = 1.23414967275184 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 301 | 301 | 301 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -361284.92 -15666.797 -365275.45 -15839.842 334.76884 334.76884 160604.25 160604.25 -920.65992 -932.85866 16000 -361323.22 -15668.458 -365314.77 -15841.548 334.85428 334.85428 160440.7 160440.7 661.77139 670.53986 Loop time of 140.724 on 1 procs for 1000 steps with 4000 atoms Performance: 0.614 ns/day, 39.090 hours/ns, 7.106 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 126.85 | 126.85 | 126.85 | 0.0 | 90.14 Neigh | 0.18846 | 0.18846 | 0.18846 | 0.0 | 0.13 Comm | 0.033848 | 0.033848 | 0.033848 | 0.0 | 0.02 Output | 4.8832e-05 | 4.8832e-05 | 4.8832e-05 | 0.0 | 0.00 Modify | 13.632 | 13.632 | 13.632 | 0.0 | 9.69 Other | | 0.01652 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 448169 ave 448169 max 448169 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 448169 Ave neighs/atom = 112.04225 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.323679949646, Press = 0.775760334275966 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 301 | 301 | 301 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -361323.22 -15668.458 -365314.77 -15841.548 334.85428 334.85428 160440.7 160440.7 661.77139 670.53986 17000 -361391.71 -15671.428 -365330.8 -15842.243 330.45321 330.45321 160577.57 160577.57 -616.71787 -624.88938 Loop time of 140.688 on 1 procs for 1000 steps with 4000 atoms Performance: 0.614 ns/day, 39.080 hours/ns, 7.108 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 126.83 | 126.83 | 126.83 | 0.0 | 90.15 Neigh | 0.18905 | 0.18905 | 0.18905 | 0.0 | 0.13 Comm | 0.033729 | 0.033729 | 0.033729 | 0.0 | 0.02 Output | 5.847e-05 | 5.847e-05 | 5.847e-05 | 0.0 | 0.00 Modify | 13.621 | 13.621 | 13.621 | 0.0 | 9.68 Other | | 0.01648 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 447697 ave 447697 max 447697 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 447697 Ave neighs/atom = 111.92425 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.211728188525, Press = -0.523733424874299 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 301 | 301 | 301 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -361391.71 -15671.428 -365330.8 -15842.243 330.45321 330.45321 160577.57 160577.57 -616.71787 -624.88938 18000 -361266.92 -15666.016 -365308.71 -15841.285 339.06885 339.06885 160428.05 160428.05 452.77483 458.7741 Loop time of 140.744 on 1 procs for 1000 steps with 4000 atoms Performance: 0.614 ns/day, 39.096 hours/ns, 7.105 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 126.86 | 126.86 | 126.86 | 0.0 | 90.14 Neigh | 0.18842 | 0.18842 | 0.18842 | 0.0 | 0.13 Comm | 0.033679 | 0.033679 | 0.033679 | 0.0 | 0.02 Output | 6.2468e-05 | 6.2468e-05 | 6.2468e-05 | 0.0 | 0.00 Modify | 13.642 | 13.642 | 13.642 | 0.0 | 9.69 Other | | 0.01658 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 447765 ave 447765 max 447765 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 447765 Ave neighs/atom = 111.94125 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.279204934369, Press = 1.11867177039092 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 301 | 301 | 301 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -361266.92 -15666.016 -365308.71 -15841.285 339.06885 339.06885 160428.05 160428.05 452.77483 458.7741 19000 -361333.12 -15668.887 -365270.26 -15839.617 330.29001 330.29001 160545.98 160545.98 -872.2155 -883.77236 Loop time of 140.768 on 1 procs for 1000 steps with 4000 atoms Performance: 0.614 ns/day, 39.102 hours/ns, 7.104 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 126.9 | 126.9 | 126.9 | 0.0 | 90.15 Neigh | 0.18883 | 0.18883 | 0.18883 | 0.0 | 0.13 Comm | 0.033704 | 0.033704 | 0.033704 | 0.0 | 0.02 Output | 5.7799e-05 | 5.7799e-05 | 5.7799e-05 | 0.0 | 0.00 Modify | 13.634 | 13.634 | 13.634 | 0.0 | 9.69 Other | | 0.01653 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 447706 ave 447706 max 447706 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 447706 Ave neighs/atom = 111.9265 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.272744853545, Press = -0.99281668020345 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 301 | 301 | 301 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -361333.12 -15668.887 -365270.26 -15839.617 330.29001 330.29001 160545.98 160545.98 -872.2155 -883.77236 20000 -361387.14 -15671.229 -365286.92 -15840.34 327.15591 327.15591 160283.19 160283.19 850.59827 861.86869 Loop time of 140.708 on 1 procs for 1000 steps with 4000 atoms Performance: 0.614 ns/day, 39.086 hours/ns, 7.107 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 126.83 | 126.83 | 126.83 | 0.0 | 90.14 Neigh | 0.18885 | 0.18885 | 0.18885 | 0.0 | 0.13 Comm | 0.033687 | 0.033687 | 0.033687 | 0.0 | 0.02 Output | 5.4042e-05 | 5.4042e-05 | 5.4042e-05 | 0.0 | 0.00 Modify | 13.634 | 13.634 | 13.634 | 0.0 | 9.69 Other | | 0.01661 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 447274 ave 447274 max 447274 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 447274 Ave neighs/atom = 111.8185 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.244549357826, Press = 1.30002703112577 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 301 | 301 | 301 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -361387.14 -15671.229 -365286.92 -15840.34 327.15591 327.15591 160283.19 160283.19 850.59827 861.86869 21000 -361417.03 -15672.526 -365364.66 -15843.711 331.17008 331.17008 160507.87 160507.87 -323.11006 -327.39127 Loop time of 140.529 on 1 procs for 1000 steps with 4000 atoms Performance: 0.615 ns/day, 39.036 hours/ns, 7.116 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 126.65 | 126.65 | 126.65 | 0.0 | 90.13 Neigh | 0.18852 | 0.18852 | 0.18852 | 0.0 | 0.13 Comm | 0.033847 | 0.033847 | 0.033847 | 0.0 | 0.02 Output | 5.5104e-05 | 5.5104e-05 | 5.5104e-05 | 0.0 | 0.00 Modify | 13.636 | 13.636 | 13.636 | 0.0 | 9.70 Other | | 0.01654 | | | 0.01 Nlocal: 4000 ave 4000 max 4000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8195 ave 8195 max 8195 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 447972 ave 447972 max 447972 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 447972 Ave neighs/atom = 111.993 Neighbor list builds = 5 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T333.15.out" else "print 'not_converged' file output/vol_T333.15.out" print '${V}' file output/vol_T333.15.out 160451.776465137 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0