AttributeError: module 'posixpath' has no attribute 'exits' Traceback (most recent call last): File "/usr/local/bin/run_openkim_job.py", line 552, in execute_in_place(runner, runner_driver, subject, subject_driver, env) File "/usr/local/bin/run_openkim_job.py", line 396, in execute_in_place if os.path.exits(KIM_TOOLS_LOG_FILE): AttributeError: module 'posixpath' has no attribute 'exits' output/pipeline.stdout: ----------------------- "source-value" [ "2d" ] } "host-wyckoff-coordinates" { "source-value" [ [ 0.6666666666666666 0.3333333333333333 0.25 ] ] } "host-wyckoff-species" { "source-value" [ "Co" ] } }] output/pipeline.stderr: ----------------------- /scratch.global/bwaters/jobs/4e7b7a3b-454c-4ef6-9e63-2b47a17e445d-007/TE_746865778644_001-and-MO_247800397145_001-1751906982/staged_job_files/repository/te/VacancyFormationEnergyRelaxationVolume_hcp_Co__TE_746865778644_001/../../td/VacancyFormationEnergyRelaxationVolume__TD_647413317626_001/runner:128: FutureWarning: Please use atoms.calc = calc atoms.set_calculator(calc)/scratch.global/bwaters/jobs/4e7b7a3b-454c-4ef6-9e63-2b47a17e445d-007/TE_746865778644_001-and-MO_247800397145_001-1751906982/staged_job_files/repository/te/VacancyFormationEnergyRelaxationVolume_hcp_Co__TE_746865778644_001/../../td/VacancyFormationEnergyRelaxationVolume__TD_647413317626_001/runner:131: FutureWarning: Please use len(self) or, if your atoms are distributed, self.get_global_number_of_atoms. numAtoms = atoms.get_number_of_atoms()/scratch.global/bwaters/jobs/4e7b7a3b-454c-4ef6-9e63-2b47a17e445d-007/TE_746865778644_001-and-MO_247800397145_001-1751906982/staged_job_files/repository/te/VacancyFormationEnergyRelaxationVolume_hcp_Co__TE_746865778644_001/../../td/VacancyFormationEnergyRelaxationVolume__TD_647413317626_001/runner:143: FutureWarning: Please use atoms.calc = calc atoms.set_calculator(self.calc)/scratch.global/bwaters/jobs/4e7b7a3b-454c-4ef6-9e63-2b47a17e445d-007/TE_746865778644_001-and-MO_247800397145_001-1751906982/staged_job_files/repository/te/VacancyFormationEnergyRelaxationVolume_hcp_Co__TE_746865778644_001/../../td/VacancyFormationEnergyRelaxationVolume__TD_647413317626_001/runner:181: FutureWarning: Please use len(self) or, if your atoms are distributed, self.get_global_number_of_atoms. numAtoms = atoms.get_number_of_atoms()/scratch.global/bwaters/jobs/4e7b7a3b-454c-4ef6-9e63-2b47a17e445d-007/TE_746865778644_001-and-MO_247800397145_001-1751906982/staged_job_files/repository/te/VacancyFormationEnergyRelaxationVolume_hcp_Co__TE_746865778644_001/../../td/VacancyFormationEnergyRelaxationVolume__TD_647413317626_001/runner:217: RuntimeWarning: Maximum number of function evaluations has been exceeded. tmpCellVector, tmpEnVacancy = fmin(/scratch.global/bwaters/jobs/4e7b7a3b-454c-4ef6-9e63-2b47a17e445d-007/TE_746865778644_001-and-MO_247800397145_001-1751906982/staged_job_files/repository/te/VacancyFormationEnergyRelaxationVolume_hcp_Co__TE_746865778644_001/../../td/VacancyFormationEnergyRelaxationVolume__TD_647413317626_001/runner:229: RuntimeWarning: Maximum number of function evaluations has been exceeded. tmpCellVector, tmpEnVacancy = fmin(/scratch.global/bwaters/jobs/4e7b7a3b-454c-4ef6-9e63-2b47a17e445d-007/TE_746865778644_001-and-MO_247800397145_001-1751906982/staged_job_files/repository/te/VacancyFormationEnergyRelaxationVolume_hcp_Co__TE_746865778644_001/../../td/VacancyFormationEnergyRelaxationVolume__TD_647413317626_001/runner:485: FutureWarning: Please use len(self) or, if your atoms are distributed, self.get_global_number_of_atoms. ('reservoir-cohesive-potential-energy', V(-unitBulk.get_potential_energy()/unitBulk.get_number_of_atoms(), UNIT_ENERGY)),{"realtime":145.41,"usertime":165.73,"systime":245.83,"memmax":101360,"memavg":0} output/kim.log: --------------- 2025-07-07:12:01:51CDT * 0 * information * 0x560dabdd41a0 * KIM_LogImplementation.cpp:107 * Log object created. Default verbosity level is 'information'.2025-07-07:12:01:51CDT * 1 * information * 0x560dabdd41a0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-07:12:01:51CDT * 0 * information * 0x560dabdd41a0 * KIM_LogImplementation.cpp:107 * Log object created. Default verbosity level is 'information'.2025-07-07:12:01:51CDT * 0 * information * 0x560dabdd5220 * KIM_LogImplementation.cpp:107 * Log object created. Default verbosity level is 'information'.2025-07-07:12:01:51CDT * 1 * information * 0x560dabdd5220 * KIM_LogImplementation.cpp:239 * Log object renamed. ID changed to '0x560dabdd41a0_Collections'.2025-07-07:12:01:51CDT * 2 * information * 0x560dabdd41a0_Collections * KIM_LogImplementation.cpp:243 * Log object renamed. ID changed from '0x560dabdd5220'.2025-07-07:12:01:51CDT * 1 * warning * 0x560dabdd41a0 * KIM_ModelImplementation.cpp:870 * Use of the GetParameterFileName(0, 0x7fff4493ad90). function is deprecated. Please use GetParameterFileBasename() instead.2025-07-07:12:01:51CDT * 3 * information * 0x560dabdd41a0_Collections * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-07:12:01:51CDT * 0 * information * 0x560dabdd5220 * KIM_LogImplementation.cpp:107 * Log object created. Default verbosity level is 'information'.2025-07-07:12:01:51CDT * 1 * information * 0x560dabdd5220 * KIM_LogImplementation.cpp:239 * Log object renamed. ID changed to '0x560dabdd41a0_0x560dabdd5220'.2025-07-07:12:01:51CDT * 2 * information * 0x560dabdd41a0_0x560dabdd5220 * KIM_LogImplementation.cpp:243 * Log object renamed. ID changed from '0x560dabdd5220'.2025-07-07:12:01:51CDT * 3 * information * 0x560dabdd41a0_0x560dabdd5220 * EAM_Implementation.cpp:1562 * Register argument supportStatus2025-07-07:12:01:51CDT * 4 * information * 0x560dabdd41a0_0x560dabdd5220 * EAM_Implementation.cpp:1581 * Register callback supportStatus2025-07-07:12:04:14CDT * 0 * information * 0x560dabdd41a0_0x560dabdd5220 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-07:12:04:14CDT * 0 * information * 0x560dabdd41a0 * KIM_LogImplementation.cpp:119 * Log object destroyed. output/kim-tools.log: ---------------------