# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.658032611012459*${_u_distance} variable latticeconst_converted equal 5.658032611012459*1 lattice diamond ${latticeconst_converted} lattice diamond 5.65803261101246 Lattice spacing in x,y,z = 5.6580326 5.6580326 5.6580326 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (56.580326 56.580326 56.580326) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (56.580326 56.580326 56.580326) create_atoms CPU = 0.005 seconds variable mass_converted equal 72.64*${_u_mass} variable mass_converted equal 72.64*1 kim_interactions Ge WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Ge #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_KimShinLee_2008_Ge__MO_657096500078_000 pair_coeff * * Ge #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 72.64 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 181132.482255555 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 181132.482255555/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 181132.482255555/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 181132.482255555/(1*1*${_u_distance}) variable V0_metal equal 181132.482255555/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 181132.482255555*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 181132.482255555 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 273.15*${_u_temperature} variable temp_converted equal 273.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 273.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "273.15 - 0.2" variable T_up equal "273.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_657096500078_000#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 18 18 18 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.683 | 4.683 | 4.683 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -30517.576 -30517.576 -30800 -30800 273.15 273.15 181132.48 181132.48 1665.4223 1665.4223 1000 -30211.097 -30211.097 -30512.18 -30512.18 291.19618 291.19618 182111.64 182111.64 316.53849 316.53849 Loop time of 120.55 on 1 procs for 1000 steps with 8000 atoms Performance: 0.717 ns/day, 33.486 hours/ns, 8.295 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 118.89 | 118.89 | 118.89 | 0.0 | 98.62 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20197 | 0.20197 | 0.20197 | 0.0 | 0.17 Output | 0.00026749 | 0.00026749 | 0.00026749 | 0.0 | 0.00 Modify | 1.2948 | 1.2948 | 1.2948 | 0.0 | 1.07 Other | | 0.1642 | | | 0.14 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 368000.0 ave 368000 max 368000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 368000 Ave neighs/atom = 46.000000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 18 18 18 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.684 | 4.684 | 4.684 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -30211.097 -30211.097 -30512.18 -30512.18 291.19618 291.19618 182111.64 182111.64 316.53849 316.53849 2000 -30240.464 -30240.464 -30530.785 -30530.785 280.78743 280.78743 182089.25 182089.25 362.90184 362.90184 Loop time of 120.912 on 1 procs for 1000 steps with 8000 atoms Performance: 0.715 ns/day, 33.587 hours/ns, 8.270 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 119.27 | 119.27 | 119.27 | 0.0 | 98.64 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20162 | 0.20162 | 0.20162 | 0.0 | 0.17 Output | 0.00031307 | 0.00031307 | 0.00031307 | 0.0 | 0.00 Modify | 1.2829 | 1.2829 | 1.2829 | 0.0 | 1.06 Other | | 0.1613 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 367994.0 ave 367994 max 367994 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 367994 Ave neighs/atom = 45.999250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 18 18 18 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.684 | 4.684 | 4.684 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -30240.464 -30240.464 -30530.785 -30530.785 280.78743 280.78743 182089.25 182089.25 362.90184 362.90184 3000 -30224.88 -30224.88 -30514.668 -30514.668 280.27272 280.27272 182318.71 182318.71 -435.8335 -435.8335 Loop time of 120.996 on 1 procs for 1000 steps with 8000 atoms Performance: 0.714 ns/day, 33.610 hours/ns, 8.265 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 119.35 | 119.35 | 119.35 | 0.0 | 98.64 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20044 | 0.20044 | 0.20044 | 0.0 | 0.17 Output | 0.00026018 | 0.00026018 | 0.00026018 | 0.0 | 0.00 Modify | 1.2822 | 1.2822 | 1.2822 | 0.0 | 1.06 Other | | 0.1628 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 367986.0 ave 367986 max 367986 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 367986 Ave neighs/atom = 45.998250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 18 18 18 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.684 | 4.684 | 4.684 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -30224.88 -30224.88 -30514.668 -30514.668 280.27272 280.27272 182318.71 182318.71 -435.8335 -435.8335 4000 -30234.878 -30234.878 -30520.097 -30520.097 275.85298 275.85298 182135.88 182135.88 307.64155 307.64155 Loop time of 120.74 on 1 procs for 1000 steps with 8000 atoms Performance: 0.716 ns/day, 33.539 hours/ns, 8.282 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 119.1 | 119.1 | 119.1 | 0.0 | 98.64 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20134 | 0.20134 | 0.20134 | 0.0 | 0.17 Output | 0.00026276 | 0.00026276 | 0.00026276 | 0.0 | 0.00 Modify | 1.2749 | 1.2749 | 1.2749 | 0.0 | 1.06 Other | | 0.1637 | | | 0.14 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 367992.0 ave 367992 max 367992 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 367992 Ave neighs/atom = 45.999000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 18 18 18 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.684 | 4.684 | 4.684 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -30234.878 -30234.878 -30520.097 -30520.097 275.85298 275.85298 182135.88 182135.88 307.64155 307.64155 5000 -30230.214 -30230.214 -30507.76 -30507.76 268.43296 268.43296 182177.18 182177.18 63.465638 63.465638 Loop time of 120.773 on 1 procs for 1000 steps with 8000 atoms Performance: 0.715 ns/day, 33.548 hours/ns, 8.280 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 119.13 | 119.13 | 119.13 | 0.0 | 98.64 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20064 | 0.20064 | 0.20064 | 0.0 | 0.17 Output | 0.00023372 | 0.00023372 | 0.00023372 | 0.0 | 0.00 Modify | 1.28 | 1.28 | 1.28 | 0.0 | 1.06 Other | | 0.1633 | | | 0.14 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 367996.0 ave 367996 max 367996 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 367996 Ave neighs/atom = 45.999500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 277.778289427287, Press = 160.634820707032 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 18 18 18 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.684 | 4.684 | 4.684 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -30230.214 -30230.214 -30507.76 -30507.76 268.43296 268.43296 182177.18 182177.18 63.465638 63.465638 6000 -30230.459 -30230.459 -30510.582 -30510.582 270.92458 270.92458 182365.97 182365.97 -593.28309 -593.28309 Loop time of 122.406 on 1 procs for 1000 steps with 8000 atoms Performance: 0.706 ns/day, 34.002 hours/ns, 8.170 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 120.7 | 120.7 | 120.7 | 0.0 | 98.61 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21084 | 0.21084 | 0.21084 | 0.0 | 0.17 Output | 0.00023516 | 0.00023516 | 0.00023516 | 0.0 | 0.00 Modify | 1.331 | 1.331 | 1.331 | 0.0 | 1.09 Other | | 0.1621 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 367996.0 ave 367996 max 367996 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 367996 Ave neighs/atom = 45.999500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.108168492098, Press = 9.91972584501874 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 18 18 18 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.684 | 4.684 | 4.684 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -30230.459 -30230.459 -30510.582 -30510.582 270.92458 270.92458 182365.97 182365.97 -593.28309 -593.28309 7000 -30232.045 -30232.045 -30512.655 -30512.655 271.39535 271.39535 182387.8 182387.8 -727.69864 -727.69864 Loop time of 128.963 on 1 procs for 1000 steps with 8000 atoms Performance: 0.670 ns/day, 35.823 hours/ns, 7.754 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.14 | 127.14 | 127.14 | 0.0 | 98.59 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21916 | 0.21916 | 0.21916 | 0.0 | 0.17 Output | 0.00027371 | 0.00027371 | 0.00027371 | 0.0 | 0.00 Modify | 1.4338 | 1.4338 | 1.4338 | 0.0 | 1.11 Other | | 0.1696 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 367996.0 ave 367996 max 367996 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 367996 Ave neighs/atom = 45.999500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.37002470031, Press = 10.4535130246965 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 18 18 18 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.684 | 4.684 | 4.684 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -30232.045 -30232.045 -30512.655 -30512.655 271.39535 271.39535 182387.8 182387.8 -727.69864 -727.69864 8000 -30230.952 -30230.952 -30512.057 -30512.057 271.87453 271.87453 182327.74 182327.74 -472.61605 -472.61605 Loop time of 143.42 on 1 procs for 1000 steps with 8000 atoms Performance: 0.602 ns/day, 39.839 hours/ns, 6.973 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 141.38 | 141.38 | 141.38 | 0.0 | 98.58 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23214 | 0.23214 | 0.23214 | 0.0 | 0.16 Output | 0.00023189 | 0.00023189 | 0.00023189 | 0.0 | 0.00 Modify | 1.623 | 1.623 | 1.623 | 0.0 | 1.13 Other | | 0.1868 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 367996.0 ave 367996 max 367996 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 367996 Ave neighs/atom = 45.999500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.226271760978, Press = 4.74918267795611 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 18 18 18 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.684 | 4.684 | 4.684 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -30230.952 -30230.952 -30512.057 -30512.057 271.87453 271.87453 182327.74 182327.74 -472.61605 -472.61605 9000 -30233.039 -30233.039 -30512.218 -30512.218 270.01166 270.01166 182319.2 182319.2 -399.20871 -399.20871 Loop time of 139.56 on 1 procs for 1000 steps with 8000 atoms Performance: 0.619 ns/day, 38.767 hours/ns, 7.165 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 137.56 | 137.56 | 137.56 | 0.0 | 98.57 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23025 | 0.23025 | 0.23025 | 0.0 | 0.16 Output | 0.00035967 | 0.00035967 | 0.00035967 | 0.0 | 0.00 Modify | 1.5873 | 1.5873 | 1.5873 | 0.0 | 1.14 Other | | 0.1813 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 367998.0 ave 367998 max 367998 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 367998 Ave neighs/atom = 45.999750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.169411321265, Press = 6.00819989788768 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 18 18 18 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.684 | 4.684 | 4.684 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -30233.039 -30233.039 -30512.218 -30512.218 270.01166 270.01166 182319.2 182319.2 -399.20871 -399.20871 10000 -30231.186 -30231.186 -30507.919 -30507.919 267.64559 267.64559 182124.69 182124.69 371.25187 371.25187 Loop time of 143.319 on 1 procs for 1000 steps with 8000 atoms Performance: 0.603 ns/day, 39.811 hours/ns, 6.977 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 141.23 | 141.23 | 141.23 | 0.0 | 98.54 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23569 | 0.23569 | 0.23569 | 0.0 | 0.16 Output | 0.00031845 | 0.00031845 | 0.00031845 | 0.0 | 0.00 Modify | 1.6684 | 1.6684 | 1.6684 | 0.0 | 1.16 Other | | 0.1873 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 367998.0 ave 367998 max 367998 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 367998 Ave neighs/atom = 45.999750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.149436579009, Press = 1.30300120922432 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 18 18 18 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.684 | 4.684 | 4.684 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -30231.186 -30231.186 -30507.919 -30507.919 267.64559 267.64559 182124.69 182124.69 371.25187 371.25187 11000 -30231.515 -30231.515 -30514.762 -30514.762 273.94591 273.94591 182230.04 182230.04 -83.306706 -83.306706 Loop time of 143.268 on 1 procs for 1000 steps with 8000 atoms Performance: 0.603 ns/day, 39.797 hours/ns, 6.980 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 141.19 | 141.19 | 141.19 | 0.0 | 98.55 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23655 | 0.23655 | 0.23655 | 0.0 | 0.17 Output | 0.00031366 | 0.00031366 | 0.00031366 | 0.0 | 0.00 Modify | 1.6596 | 1.6596 | 1.6596 | 0.0 | 1.16 Other | | 0.1854 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 367996.0 ave 367996 max 367996 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 367996 Ave neighs/atom = 45.999500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.237660156651, Press = -1.05497918083653 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 18 18 18 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.684 | 4.684 | 4.684 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -30231.515 -30231.515 -30514.762 -30514.762 273.94591 273.94591 182230.04 182230.04 -83.306706 -83.306706 12000 -30233.135 -30233.135 -30511.637 -30511.637 269.35695 269.35695 182317.17 182317.17 -499.61581 -499.61581 Loop time of 125.299 on 1 procs for 1000 steps with 8000 atoms Performance: 0.690 ns/day, 34.805 hours/ns, 7.981 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.55 | 123.55 | 123.55 | 0.0 | 98.60 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20902 | 0.20902 | 0.20902 | 0.0 | 0.17 Output | 0.00023037 | 0.00023037 | 0.00023037 | 0.0 | 0.00 Modify | 1.3728 | 1.3728 | 1.3728 | 0.0 | 1.10 Other | | 0.1676 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 367998.0 ave 367998 max 367998 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 367998 Ave neighs/atom = 45.999750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.204164200299, Press = -2.3057003359023 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 18 18 18 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.684 | 4.684 | 4.684 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -30233.135 -30233.135 -30511.637 -30511.637 269.35695 269.35695 182317.17 182317.17 -499.61581 -499.61581 13000 -30234.617 -30234.617 -30513.671 -30513.671 269.89024 269.89024 182347.07 182347.07 -729.35987 -729.35987 Loop time of 124.404 on 1 procs for 1000 steps with 8000 atoms Performance: 0.695 ns/day, 34.557 hours/ns, 8.038 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.67 | 122.67 | 122.67 | 0.0 | 98.60 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20878 | 0.20878 | 0.20878 | 0.0 | 0.17 Output | 0.00023004 | 0.00023004 | 0.00023004 | 0.0 | 0.00 Modify | 1.3624 | 1.3624 | 1.3624 | 0.0 | 1.10 Other | | 0.1642 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 367998.0 ave 367998 max 367998 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 367998 Ave neighs/atom = 45.999750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.110664897532, Press = -1.49605241582088 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 18 18 18 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.684 | 4.684 | 4.684 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -30234.617 -30234.617 -30513.671 -30513.671 269.89024 269.89024 182347.07 182347.07 -729.35987 -729.35987 14000 -30225.825 -30225.825 -30509.714 -30509.714 274.56747 274.56747 182353.07 182353.07 -533.00349 -533.00349 Loop time of 122.272 on 1 procs for 1000 steps with 8000 atoms Performance: 0.707 ns/day, 33.964 hours/ns, 8.179 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 120.57 | 120.57 | 120.57 | 0.0 | 98.61 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20833 | 0.20833 | 0.20833 | 0.0 | 0.17 Output | 0.00023975 | 0.00023975 | 0.00023975 | 0.0 | 0.00 Modify | 1.3287 | 1.3287 | 1.3287 | 0.0 | 1.09 Other | | 0.1607 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 367994.0 ave 367994 max 367994 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 367994 Ave neighs/atom = 45.999250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.126842873147, Press = -0.483330314405005 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 18 18 18 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.684 | 4.684 | 4.684 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -30225.825 -30225.825 -30509.714 -30509.714 274.56747 274.56747 182353.07 182353.07 -533.00349 -533.00349 15000 -30233.039 -30233.039 -30508.731 -30508.731 266.63867 266.63867 182253.09 182253.09 -175.44102 -175.44102 Loop time of 122.17 on 1 procs for 1000 steps with 8000 atoms Performance: 0.707 ns/day, 33.936 hours/ns, 8.185 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 120.47 | 120.47 | 120.47 | 0.0 | 98.61 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20918 | 0.20918 | 0.20918 | 0.0 | 0.17 Output | 0.00049676 | 0.00049676 | 0.00049676 | 0.0 | 0.00 Modify | 1.329 | 1.329 | 1.329 | 0.0 | 1.09 Other | | 0.16 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 367994.0 ave 367994 max 367994 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 367994 Ave neighs/atom = 45.999250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.098070295318, Press = 0.651524752360847 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 18 18 18 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.684 | 4.684 | 4.684 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -30233.039 -30233.039 -30508.731 -30508.731 266.63867 266.63867 182253.09 182253.09 -175.44102 -175.44102 16000 -30232.531 -30232.531 -30512.183 -30512.183 270.46863 270.46863 182148.76 182148.76 210.85482 210.85482 Loop time of 122.278 on 1 procs for 1000 steps with 8000 atoms Performance: 0.707 ns/day, 33.966 hours/ns, 8.178 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 120.58 | 120.58 | 120.58 | 0.0 | 98.61 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21188 | 0.21188 | 0.21188 | 0.0 | 0.17 Output | 0.00023156 | 0.00023156 | 0.00023156 | 0.0 | 0.00 Modify | 1.3293 | 1.3293 | 1.3293 | 0.0 | 1.09 Other | | 0.1608 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 367988.0 ave 367988 max 367988 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 367988 Ave neighs/atom = 45.998500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.063893318705, Press = -0.886668767200102 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 18 18 18 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.684 | 4.684 | 4.684 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -30232.531 -30232.531 -30512.183 -30512.183 270.46863 270.46863 182148.76 182148.76 210.85482 210.85482 17000 -30231.525 -30231.525 -30522.952 -30522.952 281.85705 281.85705 182223.3 182223.3 -42.717676 -42.717676 Loop time of 142.846 on 1 procs for 1000 steps with 8000 atoms Performance: 0.605 ns/day, 39.679 hours/ns, 7.001 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 140.79 | 140.79 | 140.79 | 0.0 | 98.56 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23356 | 0.23356 | 0.23356 | 0.0 | 0.16 Output | 0.00032313 | 0.00032313 | 0.00032313 | 0.0 | 0.00 Modify | 1.6326 | 1.6326 | 1.6326 | 0.0 | 1.14 Other | | 0.1851 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 367998.0 ave 367998 max 367998 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 367998 Ave neighs/atom = 45.999750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.019160272175, Press = -0.41505173279293 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 18 18 18 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.684 | 4.684 | 4.684 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -30231.525 -30231.525 -30522.952 -30522.952 281.85705 281.85705 182223.3 182223.3 -42.717676 -42.717676 18000 -30228.704 -30228.704 -30513.438 -30513.438 275.38463 275.38463 182148.16 182148.16 384.11704 384.11704 Loop time of 143.08 on 1 procs for 1000 steps with 8000 atoms Performance: 0.604 ns/day, 39.744 hours/ns, 6.989 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 141.02 | 141.02 | 141.02 | 0.0 | 98.56 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23374 | 0.23374 | 0.23374 | 0.0 | 0.16 Output | 0.0002346 | 0.0002346 | 0.0002346 | 0.0 | 0.00 Modify | 1.6451 | 1.6451 | 1.6451 | 0.0 | 1.15 Other | | 0.1851 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 367998.0 ave 367998 max 367998 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 367998 Ave neighs/atom = 45.999750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T273.15.out" else "print 'not_converged' file output/vol_T273.15.out" print '${V}' file output/vol_T273.15.out 182216.356500423 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0