# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.775043770670891*${_u_distance} variable latticeconst_converted equal 5.775043770670891*1 lattice diamond ${latticeconst_converted} lattice diamond 5.77504377067089 Lattice spacing in x,y,z = 5.77504 5.77504 5.77504 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (57.7504 57.7504 57.7504) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms create_atoms CPU = 0.000783205 secs variable mass_converted equal 72.64*${_u_mass} variable mass_converted equal 72.64*1 # specify which KIM Model to use pair_style kim SNAP_ZuoChenLi_2019quadratic_Ge__MO_766484508139_000 pair_coeff * * Ge mass 1 ${mass_converted} mass 1 72.64 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 192604.238745885 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 192604.238745885/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 192604.238745885/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 192604.238745885/(1*1*${_u_distance}) variable V0_metal equal 192604.238745885/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 192604.238745885*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 192604.238745885 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.9 ghost atom cutoff = 6.9 binsize = 3.45, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.9 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.677 | 4.677 | 4.677 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -35682.839 -35682.839 -35944.584 -35944.584 253.15 253.15 192604.24 192604.24 1451.5545 1451.5545 1000 -35388.973 -35388.973 -35642.145 -35642.145 244.85889 244.85889 194466.99 194466.99 154.88833 154.88833 Loop time of 1785.71 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 496.029 hours/ns, 0.560 timesteps/s 77.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1785.3 | 1785.3 | 1785.3 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.046767 | 0.046767 | 0.046767 | 0.0 | 0.00 Output | 5.5075e-05 | 5.5075e-05 | 5.5075e-05 | 0.0 | 0.00 Modify | 0.35129 | 0.35129 | 0.35129 | 0.0 | 0.02 Other | | 0.03093 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 368000 ave 368000 max 368000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 368000 Ave neighs/atom = 46 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -35388.973 -35388.973 -35642.145 -35642.145 244.85889 244.85889 194466.99 194466.99 154.88833 154.88833 2000 -35415.228 -35415.228 -35671.753 -35671.753 248.10142 248.10142 194231.71 194231.71 261.89075 261.89075 Loop time of 1796.42 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 499.004 hours/ns, 0.557 timesteps/s 77.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1795.9 | 1795.9 | 1795.9 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.04636 | 0.04636 | 0.04636 | 0.0 | 0.00 Output | 4.9114e-05 | 4.9114e-05 | 4.9114e-05 | 0.0 | 0.00 Modify | 0.38997 | 0.38997 | 0.38997 | 0.0 | 0.02 Other | | 0.05138 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372474 ave 372474 max 372474 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372474 Ave neighs/atom = 46.5592 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -35415.228 -35415.228 -35671.753 -35671.753 248.10142 248.10142 194231.71 194231.71 261.89075 261.89075 3000 -35401.828 -35401.828 -35658.928 -35658.928 248.65742 248.65742 194801.83 194801.83 -1161.6044 -1161.6044 Loop time of 1794.65 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 498.513 hours/ns, 0.557 timesteps/s 76.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1794.2 | 1794.2 | 1794.2 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.046593 | 0.046593 | 0.046593 | 0.0 | 0.00 Output | 5.1975e-05 | 5.1975e-05 | 5.1975e-05 | 0.0 | 0.00 Modify | 0.33003 | 0.33003 | 0.33003 | 0.0 | 0.02 Other | | 0.0309 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372266 ave 372266 max 372266 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372266 Ave neighs/atom = 46.5333 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -35401.828 -35401.828 -35658.928 -35658.928 248.65742 248.65742 194801.83 194801.83 -1161.6044 -1161.6044 4000 -35410.537 -35410.537 -35663.466 -35663.466 244.62406 244.62406 194348.22 194348.22 122.99173 122.99173 Loop time of 1785.96 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 496.099 hours/ns, 0.560 timesteps/s 77.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1785.5 | 1785.5 | 1785.5 | 0.0 | 99.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.046207 | 0.046207 | 0.046207 | 0.0 | 0.00 Output | 5.1975e-05 | 5.1975e-05 | 5.1975e-05 | 0.0 | 0.00 Modify | 0.35046 | 0.35046 | 0.35046 | 0.0 | 0.02 Other | | 0.03104 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372522 ave 372522 max 372522 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372522 Ave neighs/atom = 46.5652 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -35410.537 -35410.537 -35663.466 -35663.466 244.62406 244.62406 194348.22 194348.22 122.99173 122.99173 5000 -35400.222 -35400.222 -35674.525 -35674.525 265.29585 265.29585 194520.36 194520.36 -488.74554 -488.74554 Loop time of 1804.48 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 501.244 hours/ns, 0.554 timesteps/s 76.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1803.9 | 1803.9 | 1803.9 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13656 | 0.13656 | 0.13656 | 0.0 | 0.01 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.38847 | 0.38847 | 0.38847 | 0.0 | 0.02 Other | | 0.05098 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372486 ave 372486 max 372486 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372486 Ave neighs/atom = 46.5607 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.203591417589, Press = -239.466133914969 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -35400.222 -35400.222 -35674.525 -35674.525 265.29585 265.29585 194520.36 194520.36 -488.74554 -488.74554 6000 -35409.743 -35409.743 -35663.338 -35663.338 245.26731 245.26731 194365.78 194365.78 23.637938 23.637938 Loop time of 1804.63 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 501.287 hours/ns, 0.554 timesteps/s 76.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1804.1 | 1804.1 | 1804.1 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.069256 | 0.069256 | 0.069256 | 0.0 | 0.00 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.47708 | 0.47708 | 0.47708 | 0.0 | 0.03 Other | | 0.03093 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 371728 ave 371728 max 371728 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 371728 Ave neighs/atom = 46.466 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.257158310404, Press = 16.1794775588361 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -35409.743 -35409.743 -35663.338 -35663.338 245.26731 245.26731 194365.78 194365.78 23.637938 23.637938 7000 -35402.942 -35402.942 -35668.349 -35668.349 256.69203 256.69203 194446.04 194446.04 -276.3158 -276.3158 Loop time of 1795.28 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 498.689 hours/ns, 0.557 timesteps/s 76.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1794.8 | 1794.8 | 1794.8 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.066425 | 0.066425 | 0.066425 | 0.0 | 0.00 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.39829 | 0.39829 | 0.39829 | 0.0 | 0.02 Other | | 0.03134 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372620 ave 372620 max 372620 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372620 Ave neighs/atom = 46.5775 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.252890397332, Press = -6.1904763112722 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -35402.942 -35402.942 -35668.349 -35668.349 256.69203 256.69203 194446.04 194446.04 -276.3158 -276.3158 8000 -35410.307 -35410.307 -35668.896 -35668.896 250.0972 250.0972 194386.28 194386.28 -142.15647 -142.15647 Loop time of 1773.81 on 1 procs for 1000 steps with 8000 atoms Performance: 0.049 ns/day, 492.725 hours/ns, 0.564 timesteps/s 77.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1773.3 | 1773.3 | 1773.3 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.046236 | 0.046236 | 0.046236 | 0.0 | 0.00 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.39775 | 0.39775 | 0.39775 | 0.0 | 0.02 Other | | 0.05112 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372236 ave 372236 max 372236 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372236 Ave neighs/atom = 46.5295 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.125906315126, Press = -2.70564123172242 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -35410.307 -35410.307 -35668.896 -35668.896 250.0972 250.0972 194386.28 194386.28 -142.15647 -142.15647 9000 -35402.21 -35402.21 -35666.863 -35666.863 255.9624 255.9624 194185.03 194185.03 597.97018 597.97018 Loop time of 1809.65 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 502.681 hours/ns, 0.553 timesteps/s 76.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1809 | 1809 | 1809 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.066016 | 0.066016 | 0.066016 | 0.0 | 0.00 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.51631 | 0.51631 | 0.51631 | 0.0 | 0.03 Other | | 0.031 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372456 ave 372456 max 372456 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372456 Ave neighs/atom = 46.557 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.216888492968, Press = -0.284370940788497 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -35402.21 -35402.21 -35666.863 -35666.863 255.9624 255.9624 194185.03 194185.03 597.97018 597.97018 10000 -35406.93 -35406.93 -35670.009 -35670.009 254.44065 254.44065 194469.96 194469.96 -391.53783 -391.53783 Loop time of 1788.53 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 496.814 hours/ns, 0.559 timesteps/s 77.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1788 | 1788 | 1788 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.095688 | 0.095688 | 0.095688 | 0.0 | 0.01 Output | 6.1989e-05 | 6.1989e-05 | 6.1989e-05 | 0.0 | 0.00 Modify | 0.36801 | 0.36801 | 0.36801 | 0.0 | 0.02 Other | | 0.05112 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372248 ave 372248 max 372248 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372248 Ave neighs/atom = 46.531 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.121810005154, Press = -5.71587450007236 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -35406.93 -35406.93 -35670.009 -35670.009 254.44065 254.44065 194469.96 194469.96 -391.53783 -391.53783 11000 -35410.207 -35410.207 -35669.948 -35669.948 251.21176 251.21176 194209.37 194209.37 409.09796 409.09796 Loop time of 1794.6 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 498.500 hours/ns, 0.557 timesteps/s 76.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1794.1 | 1794.1 | 1794.1 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.067672 | 0.067672 | 0.067672 | 0.0 | 0.00 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.40869 | 0.40869 | 0.40869 | 0.0 | 0.02 Other | | 0.03141 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372072 ave 372072 max 372072 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372072 Ave neighs/atom = 46.509 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.217013288087, Press = -0.35960642293718 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -35410.207 -35410.207 -35669.948 -35669.948 251.21176 251.21176 194209.37 194209.37 409.09796 409.09796 12000 -35398.683 -35398.683 -35661.112 -35661.112 253.81123 253.81123 194513.19 194513.19 -319.87007 -319.87007 Loop time of 1792.55 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 497.929 hours/ns, 0.558 timesteps/s 76.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1792.1 | 1792.1 | 1792.1 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.046556 | 0.046556 | 0.046556 | 0.0 | 0.00 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.35832 | 0.35832 | 0.35832 | 0.0 | 0.02 Other | | 0.05116 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372194 ave 372194 max 372194 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372194 Ave neighs/atom = 46.5243 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.222383851798, Press = -2.88109619709449 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -35398.683 -35398.683 -35661.112 -35661.112 253.81123 253.81123 194513.19 194513.19 -319.87007 -319.87007 13000 -35405.997 -35405.997 -35667.42 -35667.42 252.83881 252.83881 194347.65 194347.65 59.650999 59.650999 Loop time of 1788.99 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 496.943 hours/ns, 0.559 timesteps/s 77.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1788.5 | 1788.5 | 1788.5 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.08649 | 0.08649 | 0.08649 | 0.0 | 0.00 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.40703 | 0.40703 | 0.40703 | 0.0 | 0.02 Other | | 0.03099 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372374 ave 372374 max 372374 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372374 Ave neighs/atom = 46.5468 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.265450277356, Press = 0.265070437404968 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -35405.997 -35405.997 -35667.42 -35667.42 252.83881 252.83881 194347.65 194347.65 59.650999 59.650999 14000 -35406.602 -35406.602 -35670.843 -35670.843 255.56332 255.56332 194260.73 194260.73 244.72822 244.72822 Loop time of 1783.53 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 495.426 hours/ns, 0.561 timesteps/s 77.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1783 | 1783 | 1783 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.046322 | 0.046322 | 0.046322 | 0.0 | 0.00 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.40712 | 0.40712 | 0.40712 | 0.0 | 0.02 Other | | 0.06109 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372288 ave 372288 max 372288 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372288 Ave neighs/atom = 46.536 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.269270917325, Press = -2.00832062067204 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -35406.602 -35406.602 -35670.843 -35670.843 255.56332 255.56332 194260.73 194260.73 244.72822 244.72822 15000 -35412.983 -35412.983 -35672.808 -35672.808 251.2934 251.2934 194414.93 194414.93 -259.15643 -259.15643 Loop time of 1782.05 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 495.015 hours/ns, 0.561 timesteps/s 77.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1781.6 | 1781.6 | 1781.6 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.046391 | 0.046391 | 0.046391 | 0.0 | 0.00 Output | 4.1008e-05 | 4.1008e-05 | 4.1008e-05 | 0.0 | 0.00 Modify | 0.37833 | 0.37833 | 0.37833 | 0.0 | 0.02 Other | | 0.03098 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372340 ave 372340 max 372340 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372340 Ave neighs/atom = 46.5425 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.198147523043, Press = -0.42694146625636 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -35412.983 -35412.983 -35672.808 -35672.808 251.2934 251.2934 194414.93 194414.93 -259.15643 -259.15643 16000 -35403.666 -35403.666 -35670.095 -35670.095 257.68005 257.68005 194277.5 194277.5 232.33626 232.33626 Loop time of 1787.21 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 496.448 hours/ns, 0.560 timesteps/s 77.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1786.7 | 1786.7 | 1786.7 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.066329 | 0.066329 | 0.066329 | 0.0 | 0.00 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.37647 | 0.37647 | 0.37647 | 0.0 | 0.02 Other | | 0.03105 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372032 ave 372032 max 372032 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372032 Ave neighs/atom = 46.504 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.195356076079, Press = -0.949564005796059 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -35403.666 -35403.666 -35670.095 -35670.095 257.68005 257.68005 194277.5 194277.5 232.33626 232.33626 17000 -35407.77 -35407.77 -35670.431 -35670.431 254.03564 254.03564 194472.38 194472.38 -308.46207 -308.46207 Loop time of 1792.42 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 497.894 hours/ns, 0.558 timesteps/s 76.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1791.9 | 1791.9 | 1791.9 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.066407 | 0.066407 | 0.066407 | 0.0 | 0.00 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.43725 | 0.43725 | 0.43725 | 0.0 | 0.02 Other | | 0.05101 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372436 ave 372436 max 372436 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372436 Ave neighs/atom = 46.5545 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.243165926914, Press = -0.588437276256957 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -35407.77 -35407.77 -35670.431 -35670.431 254.03564 254.03564 194472.38 194472.38 -308.46207 -308.46207 18000 -35403.068 -35403.068 -35663.959 -35663.959 252.32443 252.32443 194183.72 194183.72 649.8178 649.8178 Loop time of 1799.14 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 499.760 hours/ns, 0.556 timesteps/s 76.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1798.6 | 1798.6 | 1798.6 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.046109 | 0.046109 | 0.046109 | 0.0 | 0.00 Output | 5.3167e-05 | 5.3167e-05 | 5.3167e-05 | 0.0 | 0.00 Modify | 0.4328 | 0.4328 | 0.4328 | 0.0 | 0.02 Other | | 0.0308 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372162 ave 372162 max 372162 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372162 Ave neighs/atom = 46.5202 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.278855495867, Press = -0.777687531747284 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -35403.068 -35403.068 -35663.959 -35663.959 252.32443 252.32443 194183.72 194183.72 649.8178 649.8178 19000 -35406.26 -35406.26 -35666.306 -35666.306 251.50682 251.50682 194551.16 194551.16 -537.89252 -537.89252 Loop time of 1790.69 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 497.415 hours/ns, 0.558 timesteps/s 76.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1790.2 | 1790.2 | 1790.2 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.046618 | 0.046618 | 0.046618 | 0.0 | 0.00 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.40683 | 0.40683 | 0.40683 | 0.0 | 0.02 Other | | 0.03128 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372928 ave 372928 max 372928 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372928 Ave neighs/atom = 46.616 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.270624859195, Press = -1.66296315380506 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -35406.26 -35406.26 -35666.306 -35666.306 251.50682 251.50682 194551.16 194551.16 -537.89252 -537.89252 20000 -35406.241 -35406.241 -35668.111 -35668.111 253.27172 253.27172 194388.54 194388.54 -51.350106 -51.350106 Loop time of 1788.11 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 496.697 hours/ns, 0.559 timesteps/s 77.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1787.6 | 1787.6 | 1787.6 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.066761 | 0.066761 | 0.066761 | 0.0 | 0.00 Output | 4.22e-05 | 4.22e-05 | 4.22e-05 | 0.0 | 0.00 Modify | 0.41866 | 0.41866 | 0.41866 | 0.0 | 0.02 Other | | 0.03116 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372088 ave 372088 max 372088 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372088 Ave neighs/atom = 46.511 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.235744206606, Press = 0.597795986333305 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -35406.241 -35406.241 -35668.111 -35668.111 253.27172 253.27172 194388.54 194388.54 -51.350106 -51.350106 21000 -35406.901 -35406.901 -35669.43 -35669.43 253.90828 253.90828 194238.9 194238.9 359.16403 359.16403 Loop time of 1781.12 on 1 procs for 1000 steps with 8000 atoms Performance: 0.049 ns/day, 494.754 hours/ns, 0.561 timesteps/s 77.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1780.6 | 1780.6 | 1780.6 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.046585 | 0.046585 | 0.046585 | 0.0 | 0.00 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.41794 | 0.41794 | 0.41794 | 0.0 | 0.02 Other | | 0.03118 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372382 ave 372382 max 372382 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372382 Ave neighs/atom = 46.5478 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.22415030377, Press = -0.993840089277322 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -35406.901 -35406.901 -35669.43 -35669.43 253.90828 253.90828 194238.9 194238.9 359.16403 359.16403 22000 -35400.639 -35400.639 -35665.301 -35665.301 255.97138 255.97138 194449.73 194449.73 -176.00729 -176.00729 Loop time of 1794.8 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 498.554 hours/ns, 0.557 timesteps/s 76.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1794.3 | 1794.3 | 1794.3 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.046603 | 0.046603 | 0.046603 | 0.0 | 0.00 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.35564 | 0.35564 | 0.35564 | 0.0 | 0.02 Other | | 0.05121 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372386 ave 372386 max 372386 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372386 Ave neighs/atom = 46.5483 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.229589098268, Press = -0.802238000513154 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -35400.639 -35400.639 -35665.301 -35665.301 255.97138 255.97138 194449.73 194449.73 -176.00729 -176.00729 23000 -35406.936 -35406.936 -35665.529 -35665.529 250.10123 250.10123 194363.94 194363.94 9.0514306 9.0514306 Loop time of 1775.91 on 1 procs for 1000 steps with 8000 atoms Performance: 0.049 ns/day, 493.308 hours/ns, 0.563 timesteps/s 77.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1775.4 | 1775.4 | 1775.4 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.066539 | 0.066539 | 0.066539 | 0.0 | 0.00 Output | 5.5075e-05 | 5.5075e-05 | 5.5075e-05 | 0.0 | 0.00 Modify | 0.35782 | 0.35782 | 0.35782 | 0.0 | 0.02 Other | | 0.05116 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372406 ave 372406 max 372406 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372406 Ave neighs/atom = 46.5508 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.245796776571, Press = -0.297449433725728 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -35406.936 -35406.936 -35665.529 -35665.529 250.10123 250.10123 194363.94 194363.94 9.0514306 9.0514306 24000 -35403.437 -35403.437 -35666.922 -35666.922 254.83203 254.83203 194409.54 194409.54 -98.57039 -98.57039 Loop time of 1752.32 on 1 procs for 1000 steps with 8000 atoms Performance: 0.049 ns/day, 486.757 hours/ns, 0.571 timesteps/s 78.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1751.8 | 1751.8 | 1751.8 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.066406 | 0.066406 | 0.066406 | 0.0 | 0.00 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.39913 | 0.39913 | 0.39913 | 0.0 | 0.02 Other | | 0.03133 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372414 ave 372414 max 372414 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372414 Ave neighs/atom = 46.5517 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.299477430781, Press = -0.490786212028327 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -35403.437 -35403.437 -35666.922 -35666.922 254.83203 254.83203 194409.54 194409.54 -98.57039 -98.57039 25000 -35408.837 -35408.837 -35669.978 -35669.978 252.5655 252.5655 194402.58 194402.58 -157.87779 -157.87779 Loop time of 1473.52 on 1 procs for 1000 steps with 8000 atoms Performance: 0.059 ns/day, 409.310 hours/ns, 0.679 timesteps/s 93.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1473.1 | 1473.1 | 1473.1 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.04811 | 0.04811 | 0.04811 | 0.0 | 0.00 Output | 4.1008e-05 | 4.1008e-05 | 4.1008e-05 | 0.0 | 0.00 Modify | 0.29598 | 0.29598 | 0.29598 | 0.0 | 0.02 Other | | 0.03081 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372540 ave 372540 max 372540 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372540 Ave neighs/atom = 46.5675 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.260990966719, Press = -0.501802730046043 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -35408.837 -35408.837 -35669.978 -35669.978 252.5655 252.5655 194402.58 194402.58 -157.87779 -157.87779 26000 -35403.12 -35403.12 -35664.344 -35664.344 252.64646 252.64646 194515.89 194515.89 -371.20649 -371.20649 Loop time of 1371.84 on 1 procs for 1000 steps with 8000 atoms Performance: 0.063 ns/day, 381.068 hours/ns, 0.729 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1371.5 | 1371.5 | 1371.5 | 0.0 | 99.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.046435 | 0.046435 | 0.046435 | 0.0 | 0.00 Output | 4.4107e-05 | 4.4107e-05 | 4.4107e-05 | 0.0 | 0.00 Modify | 0.2974 | 0.2974 | 0.2974 | 0.0 | 0.02 Other | | 0.03105 | | | 0.00 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372394 ave 372394 max 372394 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372394 Ave neighs/atom = 46.5493 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 194370.851738461 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0