# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.431230753660202*${_u_distance} variable latticeconst_converted equal 5.431230753660202*1 lattice diamond ${latticeconst_converted} lattice diamond 5.4312307536602 Lattice spacing in x,y,z = 5.4312308 5.4312308 5.4312308 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (54.312308 54.312308 54.312308) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms create_atoms CPU = 0.001 seconds variable mass_converted equal 28.0855*${_u_mass} variable mass_converted equal 28.0855*1 kim_interactions Si #=== BEGIN kim_interactions ================================== pair_style kim Tersoff_LAMMPS_Tersoff_1988T2_Si__MO_245095684871_003 pair_coeff * * Si #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 28.0855 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 160211.897623003 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 160211.897623003/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 160211.897623003/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 160211.897623003/(1*1*${_u_distance}) variable V0_metal equal 160211.897623003/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 160211.897623003*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 160211.897623003 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 273.15*${_u_temperature} variable temp_converted equal 273.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 273.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "273.15 - 0.2" variable T_up equal "273.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.2 ghost atom cutoff = 5.2 binsize = 2.6, bins = 21 21 21 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, ghost, cut 5.2 pair build: full/bin/ghost stencil: full/ghost/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.609 | 4.609 | 4.609 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -36760.873 -36760.873 -37043.297 -37043.297 273.15 273.15 160211.9 160211.9 1882.8912 1882.8912 1000 -36449.743 -36449.743 -36731.298 -36731.298 272.30975 272.30975 159902.57 159902.57 -211.1139 -211.1139 Loop time of 53.7938 on 1 procs for 1000 steps with 8000 atoms Performance: 1.606 ns/day, 14.943 hours/ns, 18.589 timesteps/s 61.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 53.176 | 53.176 | 53.176 | 0.0 | 98.85 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037941 | 0.037941 | 0.037941 | 0.0 | 0.07 Output | 5.62e-05 | 5.62e-05 | 5.62e-05 | 0.0 | 0.00 Modify | 0.529 | 0.529 | 0.529 | 0.0 | 0.98 Other | | 0.05051 | | | 0.09 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995.00 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224000.0 ave 224000 max 224000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224000 Ave neighs/atom = 28.000000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.609 | 4.609 | 4.609 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -36449.743 -36449.743 -36731.298 -36731.298 272.30975 272.30975 159902.57 159902.57 -211.1139 -211.1139 2000 -36480.617 -36480.617 -36752.722 -36752.722 263.16949 263.16949 159964.26 159964.26 -371.85455 -371.85455 Loop time of 58.6179 on 1 procs for 1000 steps with 8000 atoms Performance: 1.474 ns/day, 16.283 hours/ns, 17.060 timesteps/s 61.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.168 | 58.168 | 58.168 | 0.0 | 99.23 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058002 | 0.058002 | 0.058002 | 0.0 | 0.10 Output | 5.21e-05 | 5.21e-05 | 5.21e-05 | 0.0 | 0.00 Modify | 0.36159 | 0.36159 | 0.36159 | 0.0 | 0.62 Other | | 0.03041 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5054.00 ave 5054 max 5054 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226834.0 ave 226834 max 226834 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226834 Ave neighs/atom = 28.354250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.609 | 4.609 | 4.609 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -36480.617 -36480.617 -36752.722 -36752.722 263.16949 263.16949 159964.26 159964.26 -371.85455 -371.85455 3000 -36460.19 -36460.19 -36751.274 -36751.274 281.52622 281.52622 160266.06 160266.06 -1934.4032 -1934.4032 Loop time of 50.9419 on 1 procs for 1000 steps with 8000 atoms Performance: 1.696 ns/day, 14.151 hours/ns, 19.630 timesteps/s 70.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 50.372 | 50.372 | 50.372 | 0.0 | 98.88 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.067498 | 0.067498 | 0.067498 | 0.0 | 0.13 Output | 5.34e-05 | 5.34e-05 | 5.34e-05 | 0.0 | 0.00 Modify | 0.47237 | 0.47237 | 0.47237 | 0.0 | 0.93 Other | | 0.03031 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5038.00 ave 5038 max 5038 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226670.0 ave 226670 max 226670 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226670 Ave neighs/atom = 28.333750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.609 | 4.609 | 4.609 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -36460.19 -36460.19 -36751.274 -36751.274 281.52622 281.52622 160266.06 160266.06 -1934.4032 -1934.4032 4000 -36473.706 -36473.706 -36759.209 -36759.209 276.12801 276.12801 160201.19 160201.19 -1424.2331 -1424.2331 Loop time of 56.5515 on 1 procs for 1000 steps with 8000 atoms Performance: 1.528 ns/day, 15.709 hours/ns, 17.683 timesteps/s 63.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 56.004 | 56.004 | 56.004 | 0.0 | 99.03 Neigh | 0.036727 | 0.036727 | 0.036727 | 0.0 | 0.06 Comm | 0.078413 | 0.078413 | 0.078413 | 0.0 | 0.14 Output | 3.96e-05 | 3.96e-05 | 3.96e-05 | 0.0 | 0.00 Modify | 0.36192 | 0.36192 | 0.36192 | 0.0 | 0.64 Other | | 0.07046 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5051.00 ave 5051 max 5051 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226838.0 ave 226838 max 226838 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226838 Ave neighs/atom = 28.354750 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.609 | 4.609 | 4.609 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -36473.706 -36473.706 -36759.209 -36759.209 276.12801 276.12801 160201.19 160201.19 -1424.2331 -1424.2331 5000 -36461.815 -36461.815 -36748.303 -36748.303 277.08121 277.08121 159880.09 159880.09 273.72332 273.72332 Loop time of 60.846 on 1 procs for 1000 steps with 8000 atoms Performance: 1.420 ns/day, 16.902 hours/ns, 16.435 timesteps/s 59.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.282 | 60.282 | 60.282 | 0.0 | 99.07 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058023 | 0.058023 | 0.058023 | 0.0 | 0.10 Output | 4.16e-05 | 4.16e-05 | 4.16e-05 | 0.0 | 0.00 Modify | 0.45539 | 0.45539 | 0.45539 | 0.0 | 0.75 Other | | 0.05073 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5018.00 ave 5018 max 5018 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226100.0 ave 226100 max 226100 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226100 Ave neighs/atom = 28.262500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 283.098370721055, Press = -275.071962467669 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.609 | 4.609 | 4.609 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -36461.815 -36461.815 -36748.303 -36748.303 277.08121 277.08121 159880.09 159880.09 273.72332 273.72332 6000 -36474.922 -36474.922 -36753.819 -36753.819 269.73868 269.73868 159584.64 159584.64 1632.3969 1632.3969 Loop time of 58.6275 on 1 procs for 1000 steps with 8000 atoms Performance: 1.474 ns/day, 16.285 hours/ns, 17.057 timesteps/s 60.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.092 | 58.092 | 58.092 | 0.0 | 99.09 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057597 | 0.057597 | 0.057597 | 0.0 | 0.10 Output | 4.34e-05 | 4.34e-05 | 4.34e-05 | 0.0 | 0.00 Modify | 0.4278 | 0.4278 | 0.4278 | 0.0 | 0.73 Other | | 0.05051 | | | 0.09 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5034.00 ave 5034 max 5034 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226578.0 ave 226578 max 226578 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226578 Ave neighs/atom = 28.322250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.591345489688, Press = -7.51009058984728 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.609 | 4.609 | 4.609 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -36474.922 -36474.922 -36753.819 -36753.819 269.73868 269.73868 159584.64 159584.64 1632.3969 1632.3969 7000 -36466.557 -36466.557 -36749.838 -36749.838 273.97885 273.97885 159963.13 159963.13 -468.75924 -468.75924 Loop time of 55.8388 on 1 procs for 1000 steps with 8000 atoms Performance: 1.547 ns/day, 15.511 hours/ns, 17.909 timesteps/s 64.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 55.1 | 55.1 | 55.1 | 0.0 | 98.68 Neigh | 0.11787 | 0.11787 | 0.11787 | 0.0 | 0.21 Comm | 0.037896 | 0.037896 | 0.037896 | 0.0 | 0.07 Output | 4.35e-05 | 4.35e-05 | 4.35e-05 | 0.0 | 0.00 Modify | 0.55285 | 0.55285 | 0.55285 | 0.0 | 0.99 Other | | 0.02988 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5047.00 ave 5047 max 5047 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226666.0 ave 226666 max 226666 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226666 Ave neighs/atom = 28.333250 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.418796432283, Press = -7.11717655788948 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.609 | 4.609 | 4.609 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -36466.557 -36466.557 -36749.838 -36749.838 273.97885 273.97885 159963.13 159963.13 -468.75924 -468.75924 8000 -36471.956 -36471.956 -36758.733 -36758.733 277.36037 277.36037 160176.6 160176.6 -1197.6236 -1197.6236 Loop time of 55.7249 on 1 procs for 1000 steps with 8000 atoms Performance: 1.550 ns/day, 15.479 hours/ns, 17.945 timesteps/s 64.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 55.093 | 55.093 | 55.093 | 0.0 | 98.87 Neigh | 0.040442 | 0.040442 | 0.040442 | 0.0 | 0.07 Comm | 0.058542 | 0.058542 | 0.058542 | 0.0 | 0.11 Output | 4.31e-05 | 4.31e-05 | 4.31e-05 | 0.0 | 0.00 Modify | 0.48183 | 0.48183 | 0.48183 | 0.0 | 0.86 Other | | 0.05076 | | | 0.09 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5031.00 ave 5031 max 5031 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226488.0 ave 226488 max 226488 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226488 Ave neighs/atom = 28.311000 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.353603938177, Press = -11.0088564703561 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.609 | 4.609 | 4.609 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -36471.956 -36471.956 -36758.733 -36758.733 277.36037 277.36037 160176.6 160176.6 -1197.6236 -1197.6236 9000 -36466.583 -36466.583 -36747.213 -36747.213 271.41524 271.41524 159794.2 159794.2 567.86639 567.86639 Loop time of 55.876 on 1 procs for 1000 steps with 8000 atoms Performance: 1.546 ns/day, 15.521 hours/ns, 17.897 timesteps/s 64.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 55.314 | 55.314 | 55.314 | 0.0 | 98.99 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.049351 | 0.049351 | 0.049351 | 0.0 | 0.09 Output | 3.59e-05 | 3.59e-05 | 3.59e-05 | 0.0 | 0.00 Modify | 0.47762 | 0.47762 | 0.47762 | 0.0 | 0.85 Other | | 0.03479 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5013.00 ave 5013 max 5013 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226068.0 ave 226068 max 226068 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226068 Ave neighs/atom = 28.258500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.315067974884, Press = -6.05539176470508 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.609 | 4.609 | 4.609 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -36466.583 -36466.583 -36747.213 -36747.213 271.41524 271.41524 159794.2 159794.2 567.86639 567.86639 10000 -36472.113 -36472.113 -36752.431 -36752.431 271.11258 271.11258 159872.3 159872.3 375.05913 375.05913 Loop time of 54.6942 on 1 procs for 1000 steps with 8000 atoms Performance: 1.580 ns/day, 15.193 hours/ns, 18.283 timesteps/s 64.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 54.198 | 54.198 | 54.198 | 0.0 | 99.09 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.077477 | 0.077477 | 0.077477 | 0.0 | 0.14 Output | 4.45e-05 | 4.45e-05 | 4.45e-05 | 0.0 | 0.00 Modify | 0.38047 | 0.38047 | 0.38047 | 0.0 | 0.70 Other | | 0.03809 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5037.00 ave 5037 max 5037 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226624.0 ave 226624 max 226624 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226624 Ave neighs/atom = 28.328000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.263153421058, Press = -6.18915488867745 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.609 | 4.609 | 4.609 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -36472.113 -36472.113 -36752.431 -36752.431 271.11258 271.11258 159872.3 159872.3 375.05913 375.05913 11000 -36469.767 -36469.767 -36752.203 -36752.203 273.16104 273.16104 159883.03 159883.03 216.72371 216.72371 Loop time of 56.8878 on 1 procs for 1000 steps with 8000 atoms Performance: 1.519 ns/day, 15.802 hours/ns, 17.578 timesteps/s 63.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 56.402 | 56.402 | 56.402 | 0.0 | 99.15 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.06031 | 0.06031 | 0.06031 | 0.0 | 0.11 Output | 4.22e-05 | 4.22e-05 | 4.22e-05 | 0.0 | 0.00 Modify | 0.39509 | 0.39509 | 0.39509 | 0.0 | 0.69 Other | | 0.03068 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5041.00 ave 5041 max 5041 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226538.0 ave 226538 max 226538 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226538 Ave neighs/atom = 28.317250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.119502023376, Press = -3.06074992104689 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.609 | 4.609 | 4.609 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -36469.767 -36469.767 -36752.203 -36752.203 273.16104 273.16104 159883.03 159883.03 216.72371 216.72371 12000 -36467.885 -36467.885 -36750.876 -36750.876 273.69863 273.69863 160152.95 160152.95 -1276.313 -1276.313 Loop time of 52.3531 on 1 procs for 1000 steps with 8000 atoms Performance: 1.650 ns/day, 14.543 hours/ns, 19.101 timesteps/s 68.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 51.855 | 51.855 | 51.855 | 0.0 | 99.05 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057934 | 0.057934 | 0.057934 | 0.0 | 0.11 Output | 4.34e-05 | 4.34e-05 | 4.34e-05 | 0.0 | 0.00 Modify | 0.40943 | 0.40943 | 0.40943 | 0.0 | 0.78 Other | | 0.03054 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5050.00 ave 5050 max 5050 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226492.0 ave 226492 max 226492 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226492 Ave neighs/atom = 28.311500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.159716547137, Press = -3.94308120967921 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.609 | 4.609 | 4.609 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -36467.885 -36467.885 -36750.876 -36750.876 273.69863 273.69863 160152.95 160152.95 -1276.313 -1276.313 13000 -36463.689 -36463.689 -36743.98 -36743.98 271.08713 271.08713 159784.2 159784.2 348.50047 348.50047 Loop time of 56.3398 on 1 procs for 1000 steps with 8000 atoms Performance: 1.534 ns/day, 15.650 hours/ns, 17.749 timesteps/s 64.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 55.851 | 55.851 | 55.851 | 0.0 | 99.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058179 | 0.058179 | 0.058179 | 0.0 | 0.10 Output | 4.57e-05 | 4.57e-05 | 4.57e-05 | 0.0 | 0.00 Modify | 0.38975 | 0.38975 | 0.38975 | 0.0 | 0.69 Other | | 0.04083 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5024.00 ave 5024 max 5024 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226416.0 ave 226416 max 226416 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226416 Ave neighs/atom = 28.302000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.165366831495, Press = -4.4717172239391 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.609 | 4.609 | 4.609 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -36463.689 -36463.689 -36743.98 -36743.98 271.08713 271.08713 159784.2 159784.2 348.50047 348.50047 14000 -36470.366 -36470.366 -36751.193 -36751.193 271.60468 271.60468 159788.78 159788.78 495.83745 495.83745 Loop time of 71.099 on 1 procs for 1000 steps with 8000 atoms Performance: 1.215 ns/day, 19.750 hours/ns, 14.065 timesteps/s 50.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 70.416 | 70.416 | 70.416 | 0.0 | 99.04 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10807 | 0.10807 | 0.10807 | 0.0 | 0.15 Output | 4.44e-05 | 4.44e-05 | 4.44e-05 | 0.0 | 0.00 Modify | 0.52363 | 0.52363 | 0.52363 | 0.0 | 0.74 Other | | 0.05091 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5051.00 ave 5051 max 5051 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226706.0 ave 226706 max 226706 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226706 Ave neighs/atom = 28.338250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.280996927028, Press = -2.32438967113684 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.610 | 4.610 | 4.610 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -36470.366 -36470.366 -36751.193 -36751.193 271.60468 271.60468 159788.78 159788.78 495.83745 495.83745 15000 -36472.652 -36472.652 -36756.284 -36756.284 274.31888 274.31888 159874.85 159874.85 -72.997842 -72.997842 Loop time of 68.8271 on 1 procs for 1000 steps with 8000 atoms Performance: 1.255 ns/day, 19.119 hours/ns, 14.529 timesteps/s 51.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.063 | 68.063 | 68.063 | 0.0 | 98.89 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058186 | 0.058186 | 0.058186 | 0.0 | 0.08 Output | 4.47e-05 | 4.47e-05 | 4.47e-05 | 0.0 | 0.00 Modify | 0.65377 | 0.65377 | 0.65377 | 0.0 | 0.95 Other | | 0.05177 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5069.00 ave 5069 max 5069 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226738.0 ave 226738 max 226738 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226738 Ave neighs/atom = 28.342250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.18042496076, Press = -2.39519647854268 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.610 | 4.610 | 4.610 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -36472.652 -36472.652 -36756.284 -36756.284 274.31888 274.31888 159874.85 159874.85 -72.997842 -72.997842 16000 -36469.914 -36469.914 -36752.433 -36752.433 273.2423 273.2423 159880.33 159880.33 -69.501579 -69.501579 Loop time of 69.574 on 1 procs for 1000 steps with 8000 atoms Performance: 1.242 ns/day, 19.326 hours/ns, 14.373 timesteps/s 51.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.987 | 68.987 | 68.987 | 0.0 | 99.16 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.058119 | 0.058119 | 0.058119 | 0.0 | 0.08 Output | 6.15e-05 | 6.15e-05 | 6.15e-05 | 0.0 | 0.00 Modify | 0.49863 | 0.49863 | 0.49863 | 0.0 | 0.72 Other | | 0.03059 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5029.00 ave 5029 max 5029 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226514.0 ave 226514 max 226514 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226514 Ave neighs/atom = 28.314250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.158107575475, Press = -3.17274994431192 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.610 | 4.610 | 4.610 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -36469.914 -36469.914 -36752.433 -36752.433 273.2423 273.2423 159880.33 159880.33 -69.501579 -69.501579 17000 -36478.844 -36478.844 -36754.782 -36754.782 266.87696 266.87696 159804.91 159804.91 227.32663 227.32663 Loop time of 66.5286 on 1 procs for 1000 steps with 8000 atoms Performance: 1.299 ns/day, 18.480 hours/ns, 15.031 timesteps/s 54.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 65.813 | 65.813 | 65.813 | 0.0 | 98.92 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.078427 | 0.078427 | 0.078427 | 0.0 | 0.12 Output | 4.49e-05 | 4.49e-05 | 4.49e-05 | 0.0 | 0.00 Modify | 0.60679 | 0.60679 | 0.60679 | 0.0 | 0.91 Other | | 0.0307 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5041.00 ave 5041 max 5041 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226556.0 ave 226556 max 226556 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226556 Ave neighs/atom = 28.319500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.127731537743, Press = -1.65615202727197 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.610 | 4.610 | 4.610 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -36478.844 -36478.844 -36754.782 -36754.782 266.87696 266.87696 159804.91 159804.91 227.32663 227.32663 18000 -36470.451 -36470.451 -36752.823 -36752.823 273.09935 273.09935 159939.16 159939.16 -290.62571 -290.62571 Loop time of 61.0455 on 1 procs for 1000 steps with 8000 atoms Performance: 1.415 ns/day, 16.957 hours/ns, 16.381 timesteps/s 59.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 60.339 | 60.339 | 60.339 | 0.0 | 98.84 Neigh | 0.021556 | 0.021556 | 0.021556 | 0.0 | 0.04 Comm | 0.099189 | 0.099189 | 0.099189 | 0.0 | 0.16 Output | 4.47e-05 | 4.47e-05 | 4.47e-05 | 0.0 | 0.00 Modify | 0.51536 | 0.51536 | 0.51536 | 0.0 | 0.84 Other | | 0.07044 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5041.00 ave 5041 max 5041 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226626.0 ave 226626 max 226626 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226626 Ave neighs/atom = 28.328250 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.123012094951, Press = -1.60770622622074 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.610 | 4.610 | 4.610 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -36470.451 -36470.451 -36752.823 -36752.823 273.09935 273.09935 159939.16 159939.16 -290.62571 -290.62571 19000 -36462.984 -36462.984 -36750.874 -36750.874 278.43572 278.43572 160023.48 160023.48 -862.64213 -862.64213 Loop time of 65.1398 on 1 procs for 1000 steps with 8000 atoms Performance: 1.326 ns/day, 18.094 hours/ns, 15.352 timesteps/s 55.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 64.424 | 64.424 | 64.424 | 0.0 | 98.90 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11811 | 0.11811 | 0.11811 | 0.0 | 0.18 Output | 4.41e-05 | 4.41e-05 | 4.41e-05 | 0.0 | 0.00 Modify | 0.5074 | 0.5074 | 0.5074 | 0.0 | 0.78 Other | | 0.09059 | | | 0.14 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5050.00 ave 5050 max 5050 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226548.0 ave 226548 max 226548 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226548 Ave neighs/atom = 28.318500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.19257106086, Press = -1.73976779676189 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.610 | 4.610 | 4.610 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -36462.984 -36462.984 -36750.874 -36750.874 278.43572 278.43572 160023.48 160023.48 -862.64213 -862.64213 20000 -36469.221 -36469.221 -36752.526 -36752.526 274.00253 274.00253 159869.31 159869.31 108.32493 108.32493 Loop time of 64.459 on 1 procs for 1000 steps with 8000 atoms Performance: 1.340 ns/day, 17.905 hours/ns, 15.514 timesteps/s 55.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.762 | 63.762 | 63.762 | 0.0 | 98.92 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.049886 | 0.049886 | 0.049886 | 0.0 | 0.08 Output | 4.46e-05 | 4.46e-05 | 4.46e-05 | 0.0 | 0.00 Modify | 0.57635 | 0.57635 | 0.57635 | 0.0 | 0.89 Other | | 0.07058 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5046.00 ave 5046 max 5046 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226578.0 ave 226578 max 226578 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226578 Ave neighs/atom = 28.322250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.220933958646, Press = -2.8699903459422 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.610 | 4.610 | 4.610 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -36469.221 -36469.221 -36752.526 -36752.526 274.00253 274.00253 159869.31 159869.31 108.32493 108.32493 21000 -36476.594 -36476.594 -36754.618 -36754.618 268.89404 268.89404 159762.87 159762.87 454.99358 454.99358 Loop time of 55.6041 on 1 procs for 1000 steps with 8000 atoms Performance: 1.554 ns/day, 15.446 hours/ns, 17.984 timesteps/s 64.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 54.795 | 54.795 | 54.795 | 0.0 | 98.55 Neigh | 0.12124 | 0.12124 | 0.12124 | 0.0 | 0.22 Comm | 0.058495 | 0.058495 | 0.058495 | 0.0 | 0.11 Output | 6.29e-05 | 6.29e-05 | 6.29e-05 | 0.0 | 0.00 Modify | 0.53543 | 0.53543 | 0.53543 | 0.0 | 0.96 Other | | 0.09351 | | | 0.17 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5043.00 ave 5043 max 5043 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226482.0 ave 226482 max 226482 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226482 Ave neighs/atom = 28.310250 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.193818683473, Press = -1.46759181661311 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.610 | 4.610 | 4.610 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -36476.594 -36476.594 -36754.618 -36754.618 268.89404 268.89404 159762.87 159762.87 454.99358 454.99358 22000 -36472.595 -36472.595 -36754.744 -36754.744 272.88376 272.88376 159984.06 159984.06 -636.566 -636.566 Loop time of 51.2286 on 1 procs for 1000 steps with 8000 atoms Performance: 1.687 ns/day, 14.230 hours/ns, 19.520 timesteps/s 70.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 50.598 | 50.598 | 50.598 | 0.0 | 98.77 Neigh | 0.059674 | 0.059674 | 0.059674 | 0.0 | 0.12 Comm | 0.037987 | 0.037987 | 0.037987 | 0.0 | 0.07 Output | 3.58e-05 | 3.58e-05 | 3.58e-05 | 0.0 | 0.00 Modify | 0.50204 | 0.50204 | 0.50204 | 0.0 | 0.98 Other | | 0.03042 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5046.00 ave 5046 max 5046 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226798.0 ave 226798 max 226798 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226798 Ave neighs/atom = 28.349750 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.217591787171, Press = -1.75183721011972 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.610 | 4.610 | 4.610 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -36472.595 -36472.595 -36754.744 -36754.744 272.88376 272.88376 159984.06 159984.06 -636.566 -636.566 23000 -36461.398 -36461.398 -36750.33 -36750.33 279.44388 279.44388 159850.69 159850.69 306.44077 306.44077 Loop time of 49.0911 on 1 procs for 1000 steps with 8000 atoms Performance: 1.760 ns/day, 13.636 hours/ns, 20.370 timesteps/s 73.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.566 | 48.566 | 48.566 | 0.0 | 98.93 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.087751 | 0.087751 | 0.087751 | 0.0 | 0.18 Output | 4.47e-05 | 4.47e-05 | 4.47e-05 | 0.0 | 0.00 Modify | 0.38733 | 0.38733 | 0.38733 | 0.0 | 0.79 Other | | 0.05037 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5042.00 ave 5042 max 5042 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226510.0 ave 226510 max 226510 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226510 Ave neighs/atom = 28.313750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.247131703908, Press = -1.23661518221209 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.610 | 4.610 | 4.610 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -36461.398 -36461.398 -36750.33 -36750.33 279.44388 279.44388 159850.69 159850.69 306.44077 306.44077 24000 -36474.562 -36474.562 -36751.523 -36751.523 267.8665 267.8665 159806.57 159806.57 339.20627 339.20627 Loop time of 44.9399 on 1 procs for 1000 steps with 8000 atoms Performance: 1.923 ns/day, 12.483 hours/ns, 22.252 timesteps/s 78.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.464 | 44.464 | 44.464 | 0.0 | 98.94 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.057374 | 0.057374 | 0.057374 | 0.0 | 0.13 Output | 4.48e-05 | 4.48e-05 | 4.48e-05 | 0.0 | 0.00 Modify | 0.38865 | 0.38865 | 0.38865 | 0.0 | 0.86 Other | | 0.03025 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5046.00 ave 5046 max 5046 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226586.0 ave 226586 max 226586 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226586 Ave neighs/atom = 28.323250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.251547679844, Press = -0.731822196879611 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.610 | 4.610 | 4.610 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -36474.562 -36474.562 -36751.523 -36751.523 267.8665 267.8665 159806.57 159806.57 339.20627 339.20627 25000 -36469.245 -36469.245 -36753.032 -36753.032 274.46846 274.46846 159854.14 159854.14 72.010445 72.010445 Loop time of 43.1711 on 1 procs for 1000 steps with 8000 atoms Performance: 2.001 ns/day, 11.992 hours/ns, 23.164 timesteps/s 82.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.778 | 42.778 | 42.778 | 0.0 | 99.09 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.036723 | 0.036723 | 0.036723 | 0.0 | 0.09 Output | 3.6e-05 | 3.6e-05 | 3.6e-05 | 0.0 | 0.00 Modify | 0.30619 | 0.30619 | 0.30619 | 0.0 | 0.71 Other | | 0.05008 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5036.00 ave 5036 max 5036 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226748.0 ave 226748 max 226748 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226748 Ave neighs/atom = 28.343500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.232737500867, Press = -1.44386168065483 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.610 | 4.610 | 4.610 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -36469.245 -36469.245 -36753.032 -36753.032 274.46846 274.46846 159854.14 159854.14 72.010445 72.010445 26000 -36468.343 -36468.343 -36754.595 -36754.595 276.85251 276.85251 159849.12 159849.12 295.95746 295.95746 Loop time of 41.8578 on 1 procs for 1000 steps with 8000 atoms Performance: 2.064 ns/day, 11.627 hours/ns, 23.890 timesteps/s 85.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.408 | 41.408 | 41.408 | 0.0 | 98.93 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037416 | 0.037416 | 0.037416 | 0.0 | 0.09 Output | 4.49e-05 | 4.49e-05 | 4.49e-05 | 0.0 | 0.00 Modify | 0.38198 | 0.38198 | 0.38198 | 0.0 | 0.91 Other | | 0.03047 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5040.00 ave 5040 max 5040 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226540.0 ave 226540 max 226540 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226540 Ave neighs/atom = 28.317500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.190376128067, Press = -0.856175674846613 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.610 | 4.610 | 4.610 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 26000 -36468.343 -36468.343 -36754.595 -36754.595 276.85251 276.85251 159849.12 159849.12 295.95746 295.95746 27000 -36461.817 -36461.817 -36746.829 -36746.829 275.65347 275.65347 159840.38 159840.38 71.661629 71.661629 Loop time of 39.4152 on 1 procs for 1000 steps with 8000 atoms Performance: 2.192 ns/day, 10.949 hours/ns, 25.371 timesteps/s 90.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 38.998 | 38.998 | 38.998 | 0.0 | 98.94 Neigh | 0.041911 | 0.041911 | 0.041911 | 0.0 | 0.11 Comm | 0.037598 | 0.037598 | 0.037598 | 0.0 | 0.10 Output | 4.42e-05 | 4.42e-05 | 4.42e-05 | 0.0 | 0.00 Modify | 0.30735 | 0.30735 | 0.30735 | 0.0 | 0.78 Other | | 0.03 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5036.00 ave 5036 max 5036 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226688.0 ave 226688 max 226688 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226688 Ave neighs/atom = 28.336000 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.179840219135, Press = -1.35896476024321 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.610 | 4.610 | 4.610 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 27000 -36461.817 -36461.817 -36746.829 -36746.829 275.65347 275.65347 159840.38 159840.38 71.661629 71.661629 28000 -36470.016 -36470.016 -36752.767 -36752.767 273.46554 273.46554 159763.51 159763.51 610.25562 610.25562 Loop time of 41.3359 on 1 procs for 1000 steps with 8000 atoms Performance: 2.090 ns/day, 11.482 hours/ns, 24.192 timesteps/s 86.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.899 | 40.899 | 40.899 | 0.0 | 98.94 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037459 | 0.037459 | 0.037459 | 0.0 | 0.09 Output | 4.48e-05 | 4.48e-05 | 4.48e-05 | 0.0 | 0.00 Modify | 0.36913 | 0.36913 | 0.36913 | 0.0 | 0.89 Other | | 0.03028 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 5049.00 ave 5049 max 5049 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 226766.0 ave 226766 max 226766 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 226766 Ave neighs/atom = 28.345750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T273.15.out" else "print 'not_converged' file output/vol_T273.15.out" print '${V}' file output/vol_T273.15.out 159888.511251508 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0