# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.430999964475632*${_u_distance} variable latticeconst_converted equal 5.430999964475632*1 lattice diamond ${latticeconst_converted} lattice diamond 5.43099996447563 Lattice spacing in x,y,z = 5.4310000 5.4310000 5.4310000 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (54.310000 54.310000 54.310000) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (54.310000 54.310000 54.310000) create_atoms CPU = 0.008 seconds variable mass_converted equal 28.0855*${_u_mass} variable mass_converted equal 28.0855*1 kim_interactions Si WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Si #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_JelinekGrohHorstemeyer_2012_AlSiMgCuFe__MO_262519520678_001 pair_coeff * * Si #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 28.0855 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 160191.474847545 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 160191.474847545/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 160191.474847545/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 160191.474847545/(1*1*${_u_distance}) variable V0_metal equal 160191.474847545/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 160191.474847545*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 160191.474847545 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_262519520678_001#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.894 | 7.894 | 7.894 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -36716.218 -36716.218 -37040 -37040 313.15 313.15 160191.47 160191.47 2158.9098 2158.9098 1000 -36357.176 -36357.176 -36693.216 -36693.216 325.00561 325.00561 162216.63 162216.63 343.02861 343.02861 Loop time of 205.071 on 1 procs for 1000 steps with 8000 atoms Performance: 0.421 ns/day, 56.964 hours/ns, 4.876 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 203.37 | 203.37 | 203.37 | 0.0 | 99.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24042 | 0.24042 | 0.24042 | 0.0 | 0.12 Output | 0.00026549 | 0.00026549 | 0.00026549 | 0.0 | 0.00 Modify | 1.2996 | 1.2996 | 1.2996 | 0.0 | 0.63 Other | | 0.1608 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 560000.0 ave 560000 max 560000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 560000 Ave neighs/atom = 70.000000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.146 | 8.146 | 8.146 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -36357.176 -36357.176 -36693.216 -36693.216 325.00561 325.00561 162216.63 162216.63 343.02861 343.02861 2000 -36392.287 -36392.287 -36726.968 -36726.968 323.69096 323.69096 162201.42 162201.42 -517.12536 -517.12536 Loop time of 206.346 on 1 procs for 1000 steps with 8000 atoms Performance: 0.419 ns/day, 57.318 hours/ns, 4.846 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 204.67 | 204.67 | 204.67 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23737 | 0.23737 | 0.23737 | 0.0 | 0.12 Output | 0.00026201 | 0.00026201 | 0.00026201 | 0.0 | 0.00 Modify | 1.2767 | 1.2767 | 1.2767 | 0.0 | 0.62 Other | | 0.1595 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8595.00 ave 8595 max 8595 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 578344.0 ave 578344 max 578344 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 578344 Ave neighs/atom = 72.293000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.146 | 8.146 | 8.146 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -36392.287 -36392.287 -36726.968 -36726.968 323.69096 323.69096 162201.42 162201.42 -517.12536 -517.12536 3000 -36372.134 -36372.134 -36703.55 -36703.55 320.53303 320.53303 162257.18 162257.18 -201.84852 -201.84852 Loop time of 209.057 on 1 procs for 1000 steps with 8000 atoms Performance: 0.413 ns/day, 58.071 hours/ns, 4.783 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 207.35 | 207.35 | 207.35 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24225 | 0.24225 | 0.24225 | 0.0 | 0.12 Output | 0.00026097 | 0.00026097 | 0.00026097 | 0.0 | 0.00 Modify | 1.298 | 1.298 | 1.298 | 0.0 | 0.62 Other | | 0.1625 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 577262.0 ave 577262 max 577262 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 577262 Ave neighs/atom = 72.157750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.146 | 8.146 | 8.146 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -36372.134 -36372.134 -36703.55 -36703.55 320.53303 320.53303 162257.18 162257.18 -201.84852 -201.84852 4000 -36385.598 -36385.598 -36702.624 -36702.624 306.61541 306.61541 162190.97 162190.97 61.945638 61.945638 Loop time of 207.633 on 1 procs for 1000 steps with 8000 atoms Performance: 0.416 ns/day, 57.676 hours/ns, 4.816 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 205.94 | 205.94 | 205.94 | 0.0 | 99.18 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2469 | 0.2469 | 0.2469 | 0.0 | 0.12 Output | 0.00026327 | 0.00026327 | 0.00026327 | 0.0 | 0.00 Modify | 1.2888 | 1.2888 | 1.2888 | 0.0 | 0.62 Other | | 0.1609 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8600.00 ave 8600 max 8600 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 578028.0 ave 578028 max 578028 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 578028 Ave neighs/atom = 72.253500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.146 | 8.146 | 8.146 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -36385.598 -36385.598 -36702.624 -36702.624 306.61541 306.61541 162190.97 162190.97 61.945638 61.945638 5000 -36379.514 -36379.514 -36699.259 -36699.259 309.24547 309.24547 162141.55 162141.55 418.28188 418.28188 Loop time of 207.273 on 1 procs for 1000 steps with 8000 atoms Performance: 0.417 ns/day, 57.576 hours/ns, 4.825 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 205.58 | 205.58 | 205.58 | 0.0 | 99.18 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24695 | 0.24695 | 0.24695 | 0.0 | 0.12 Output | 0.00022895 | 0.00022895 | 0.00022895 | 0.0 | 0.00 Modify | 1.29 | 1.29 | 1.29 | 0.0 | 0.62 Other | | 0.1604 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8596.00 ave 8596 max 8596 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 578850.0 ave 578850 max 578850 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 578850 Ave neighs/atom = 72.356250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 316.038508588777, Press = 79.4915097198076 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.146 | 8.146 | 8.146 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -36379.514 -36379.514 -36699.259 -36699.259 309.24547 309.24547 162141.55 162141.55 418.28188 418.28188 6000 -36380.583 -36380.583 -36709.278 -36709.278 317.90117 317.90117 162046.22 162046.22 853.96151 853.96151 Loop time of 207.612 on 1 procs for 1000 steps with 8000 atoms Performance: 0.416 ns/day, 57.670 hours/ns, 4.817 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 205.88 | 205.88 | 205.88 | 0.0 | 99.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24729 | 0.24729 | 0.24729 | 0.0 | 0.12 Output | 0.00028103 | 0.00028103 | 0.00028103 | 0.0 | 0.00 Modify | 1.321 | 1.321 | 1.321 | 0.0 | 0.64 Other | | 0.1613 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 579880.0 ave 579880 max 579880 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 579880 Ave neighs/atom = 72.485000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.867938103564, Press = -2.61927884394664 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.146 | 8.146 | 8.146 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -36380.583 -36380.583 -36709.278 -36709.278 317.90117 317.90117 162046.22 162046.22 853.96151 853.96151 7000 -36383.301 -36383.301 -36712.725 -36712.725 318.60687 318.60687 162154.14 162154.14 115.33796 115.33796 Loop time of 208.319 on 1 procs for 1000 steps with 8000 atoms Performance: 0.415 ns/day, 57.866 hours/ns, 4.800 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 206.59 | 206.59 | 206.59 | 0.0 | 99.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24578 | 0.24578 | 0.24578 | 0.0 | 0.12 Output | 0.00023598 | 0.00023598 | 0.00023598 | 0.0 | 0.00 Modify | 1.3206 | 1.3206 | 1.3206 | 0.0 | 0.63 Other | | 0.1609 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8597.00 ave 8597 max 8597 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 579638.0 ave 579638 max 579638 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 579638 Ave neighs/atom = 72.454750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.268749055551, Press = -13.3627272896851 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.146 | 8.146 | 8.146 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -36383.301 -36383.301 -36712.725 -36712.725 318.60687 318.60687 162154.14 162154.14 115.33796 115.33796 8000 -36378.049 -36378.049 -36701.821 -36701.821 313.14089 313.14089 162313.17 162313.17 -566.06679 -566.06679 Loop time of 208.091 on 1 procs for 1000 steps with 8000 atoms Performance: 0.415 ns/day, 57.803 hours/ns, 4.806 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 206.36 | 206.36 | 206.36 | 0.0 | 99.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24706 | 0.24706 | 0.24706 | 0.0 | 0.12 Output | 0.00023218 | 0.00023218 | 0.00023218 | 0.0 | 0.00 Modify | 1.326 | 1.326 | 1.326 | 0.0 | 0.64 Other | | 0.1606 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 577676.0 ave 577676 max 577676 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 577676 Ave neighs/atom = 72.209500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.071174257678, Press = -2.43498426010572 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.146 | 8.146 | 8.146 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -36378.049 -36378.049 -36701.821 -36701.821 313.14089 313.14089 162313.17 162313.17 -566.06679 -566.06679 9000 -36385.95 -36385.95 -36711.498 -36711.498 314.85846 314.85846 162262.22 162262.22 -568.80808 -568.80808 Loop time of 207.993 on 1 procs for 1000 steps with 8000 atoms Performance: 0.415 ns/day, 57.776 hours/ns, 4.808 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 206.27 | 206.27 | 206.27 | 0.0 | 99.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24567 | 0.24567 | 0.24567 | 0.0 | 0.12 Output | 0.00027599 | 0.00027599 | 0.00027599 | 0.0 | 0.00 Modify | 1.3203 | 1.3203 | 1.3203 | 0.0 | 0.63 Other | | 0.1599 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8600.00 ave 8600 max 8600 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 578128.0 ave 578128 max 578128 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 578128 Ave neighs/atom = 72.266000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.150926698074, Press = 2.72233918533855 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.146 | 8.146 | 8.146 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -36385.95 -36385.95 -36711.498 -36711.498 314.85846 314.85846 162262.22 162262.22 -568.80808 -568.80808 10000 -36377.005 -36377.005 -36700.12 -36700.12 312.50424 312.50424 162196.26 162196.26 120.30744 120.30744 Loop time of 207.96 on 1 procs for 1000 steps with 8000 atoms Performance: 0.415 ns/day, 57.767 hours/ns, 4.809 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 206.23 | 206.23 | 206.23 | 0.0 | 99.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24566 | 0.24566 | 0.24566 | 0.0 | 0.12 Output | 0.00023392 | 0.00023392 | 0.00023392 | 0.0 | 0.00 Modify | 1.3209 | 1.3209 | 1.3209 | 0.0 | 0.64 Other | | 0.1603 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8599.00 ave 8599 max 8599 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 577650.0 ave 577650 max 577650 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 577650 Ave neighs/atom = 72.206250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.132504174534, Press = 2.23832422024615 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.146 | 8.146 | 8.146 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -36377.005 -36377.005 -36700.12 -36700.12 312.50424 312.50424 162196.26 162196.26 120.30744 120.30744 11000 -36383.831 -36383.831 -36701.379 -36701.379 307.12047 307.12047 162133.36 162133.36 457.22922 457.22922 Loop time of 208.31 on 1 procs for 1000 steps with 8000 atoms Performance: 0.415 ns/day, 57.864 hours/ns, 4.801 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 206.57 | 206.57 | 206.57 | 0.0 | 99.16 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24882 | 0.24882 | 0.24882 | 0.0 | 0.12 Output | 0.0002814 | 0.0002814 | 0.0002814 | 0.0 | 0.00 Modify | 1.331 | 1.331 | 1.331 | 0.0 | 0.64 Other | | 0.1614 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8593.00 ave 8593 max 8593 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 579038.0 ave 579038 max 579038 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 579038 Ave neighs/atom = 72.379750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.097097859214, Press = 1.45687432572077 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.146 | 8.146 | 8.146 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -36383.831 -36383.831 -36701.379 -36701.379 307.12047 307.12047 162133.36 162133.36 457.22922 457.22922 12000 -36380.92 -36380.92 -36708.139 -36708.139 316.4748 316.4748 162082.32 162082.32 608.41778 608.41778 Loop time of 208.305 on 1 procs for 1000 steps with 8000 atoms Performance: 0.415 ns/day, 57.862 hours/ns, 4.801 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 206.56 | 206.56 | 206.56 | 0.0 | 99.16 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24751 | 0.24751 | 0.24751 | 0.0 | 0.12 Output | 0.00023258 | 0.00023258 | 0.00023258 | 0.0 | 0.00 Modify | 1.3301 | 1.3301 | 1.3301 | 0.0 | 0.64 Other | | 0.1619 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8594.00 ave 8594 max 8594 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 579532.0 ave 579532 max 579532 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 579532 Ave neighs/atom = 72.441500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.239796097109, Press = -0.657008621793064 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.146 | 8.146 | 8.146 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -36380.92 -36380.92 -36708.139 -36708.139 316.4748 316.4748 162082.32 162082.32 608.41778 608.41778 13000 -36380.531 -36380.531 -36700.692 -36700.692 309.64765 309.64765 162153.21 162153.21 364.0835 364.0835 Loop time of 208.291 on 1 procs for 1000 steps with 8000 atoms Performance: 0.415 ns/day, 57.859 hours/ns, 4.801 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 206.55 | 206.55 | 206.55 | 0.0 | 99.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24728 | 0.24728 | 0.24728 | 0.0 | 0.12 Output | 0.00027782 | 0.00027782 | 0.00027782 | 0.0 | 0.00 Modify | 1.328 | 1.328 | 1.328 | 0.0 | 0.64 Other | | 0.1615 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8599.00 ave 8599 max 8599 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 579804.0 ave 579804 max 579804 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 579804 Ave neighs/atom = 72.475500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.298378344711, Press = -3.56981593552169 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.146 | 8.146 | 8.146 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -36380.531 -36380.531 -36700.692 -36700.692 309.64765 309.64765 162153.21 162153.21 364.0835 364.0835 14000 -36384.117 -36384.117 -36707.2 -36707.2 312.47374 312.47374 162299.08 162299.08 -605.83305 -605.83305 Loop time of 207.151 on 1 procs for 1000 steps with 8000 atoms Performance: 0.417 ns/day, 57.542 hours/ns, 4.827 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 205.42 | 205.42 | 205.42 | 0.0 | 99.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24245 | 0.24245 | 0.24245 | 0.0 | 0.12 Output | 0.00029766 | 0.00029766 | 0.00029766 | 0.0 | 0.00 Modify | 1.3229 | 1.3229 | 1.3229 | 0.0 | 0.64 Other | | 0.1614 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8599.00 ave 8599 max 8599 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 579086.0 ave 579086 max 579086 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 579086 Ave neighs/atom = 72.385750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.418545489184, Press = -1.70293540950871 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.146 | 8.146 | 8.146 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -36384.117 -36384.117 -36707.2 -36707.2 312.47374 312.47374 162299.08 162299.08 -605.83305 -605.83305 15000 -36379.954 -36379.954 -36704.112 -36704.112 313.51314 313.51314 162295.03 162295.03 -505.15276 -505.15276 Loop time of 206.137 on 1 procs for 1000 steps with 8000 atoms Performance: 0.419 ns/day, 57.260 hours/ns, 4.851 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 204.43 | 204.43 | 204.43 | 0.0 | 99.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23831 | 0.23831 | 0.23831 | 0.0 | 0.12 Output | 0.00022894 | 0.00022894 | 0.00022894 | 0.0 | 0.00 Modify | 1.3118 | 1.3118 | 1.3118 | 0.0 | 0.64 Other | | 0.1607 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8598.00 ave 8598 max 8598 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 577402.0 ave 577402 max 577402 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 577402 Ave neighs/atom = 72.175250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.387757730212, Press = 0.280031374152543 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.146 | 8.146 | 8.146 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -36379.954 -36379.954 -36704.112 -36704.112 313.51314 313.51314 162295.03 162295.03 -505.15276 -505.15276 16000 -36382.614 -36382.614 -36705.98 -36705.98 312.74738 312.74738 162249.84 162249.84 -282.16372 -282.16372 Loop time of 207.309 on 1 procs for 1000 steps with 8000 atoms Performance: 0.417 ns/day, 57.586 hours/ns, 4.824 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 205.58 | 205.58 | 205.58 | 0.0 | 99.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24543 | 0.24543 | 0.24543 | 0.0 | 0.12 Output | 0.00023114 | 0.00023114 | 0.00023114 | 0.0 | 0.00 Modify | 1.3194 | 1.3194 | 1.3194 | 0.0 | 0.64 Other | | 0.1608 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8595.00 ave 8595 max 8595 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 578192.0 ave 578192 max 578192 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 578192 Ave neighs/atom = 72.274000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.441239936825, Press = 1.58081959600888 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.146 | 8.146 | 8.146 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -36382.614 -36382.614 -36705.98 -36705.98 312.74738 312.74738 162249.84 162249.84 -282.16372 -282.16372 17000 -36379.346 -36379.346 -36705.408 -36705.408 315.35598 315.35598 162162.53 162162.53 249.45359 249.45359 Loop time of 209.278 on 1 procs for 1000 steps with 8000 atoms Performance: 0.413 ns/day, 58.133 hours/ns, 4.778 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 207.53 | 207.53 | 207.53 | 0.0 | 99.16 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25044 | 0.25044 | 0.25044 | 0.0 | 0.12 Output | 0.00032413 | 0.00032413 | 0.00032413 | 0.0 | 0.00 Modify | 1.3404 | 1.3404 | 1.3404 | 0.0 | 0.64 Other | | 0.1618 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8600.00 ave 8600 max 8600 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 578026.0 ave 578026 max 578026 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 578026 Ave neighs/atom = 72.253250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.529216646355, Press = 1.79779130680884 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.146 | 8.146 | 8.146 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -36379.346 -36379.346 -36705.408 -36705.408 315.35598 315.35598 162162.53 162162.53 249.45359 249.45359 18000 -36377.87 -36377.87 -36706.55 -36706.55 317.8872 317.8872 162083.16 162083.16 701.00276 701.00276 Loop time of 242.293 on 1 procs for 1000 steps with 8000 atoms Performance: 0.357 ns/day, 67.304 hours/ns, 4.127 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 240.17 | 240.17 | 240.17 | 0.0 | 99.12 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2773 | 0.2773 | 0.2773 | 0.0 | 0.11 Output | 0.00023713 | 0.00023713 | 0.00023713 | 0.0 | 0.00 Modify | 1.6612 | 1.6612 | 1.6612 | 0.0 | 0.69 Other | | 0.186 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8597.00 ave 8597 max 8597 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 578400.0 ave 578400 max 578400 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 578400 Ave neighs/atom = 72.300000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.438925838168, Press = 1.00559174046934 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.146 | 8.146 | 8.146 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -36377.87 -36377.87 -36706.55 -36706.55 317.8872 317.8872 162083.16 162083.16 701.00276 701.00276 19000 -36390.649 -36390.649 -36710.338 -36710.338 309.1921 309.1921 162027.39 162027.39 855.51324 855.51324 Loop time of 242.417 on 1 procs for 1000 steps with 8000 atoms Performance: 0.356 ns/day, 67.338 hours/ns, 4.125 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 240.32 | 240.32 | 240.32 | 0.0 | 99.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.27666 | 0.27666 | 0.27666 | 0.0 | 0.11 Output | 0.00028351 | 0.00028351 | 0.00028351 | 0.0 | 0.00 Modify | 1.6376 | 1.6376 | 1.6376 | 0.0 | 0.68 Other | | 0.1856 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8594.00 ave 8594 max 8594 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 579110.0 ave 579110 max 579110 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 579110 Ave neighs/atom = 72.388750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.364702429647, Press = -1.047736394282 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.146 | 8.146 | 8.146 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -36390.649 -36390.649 -36710.338 -36710.338 309.1921 309.1921 162027.39 162027.39 855.51324 855.51324 20000 -36376.704 -36376.704 -36706.821 -36706.821 319.27669 319.27669 162258.16 162258.16 -288.44706 -288.44706 Loop time of 242.682 on 1 procs for 1000 steps with 8000 atoms Performance: 0.356 ns/day, 67.412 hours/ns, 4.121 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 240.57 | 240.57 | 240.57 | 0.0 | 99.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.27597 | 0.27597 | 0.27597 | 0.0 | 0.11 Output | 0.00031773 | 0.00031773 | 0.00031773 | 0.0 | 0.00 Modify | 1.6478 | 1.6478 | 1.6478 | 0.0 | 0.68 Other | | 0.186 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 579520.0 ave 579520 max 579520 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 579520 Ave neighs/atom = 72.440000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.321911010632, Press = -1.66799094884411 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.146 | 8.146 | 8.146 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -36376.704 -36376.704 -36706.821 -36706.821 319.27669 319.27669 162258.16 162258.16 -288.44706 -288.44706 21000 -36380.369 -36380.369 -36701.325 -36701.325 310.41653 310.41653 162285.65 162285.65 -417.95432 -417.95432 Loop time of 241.993 on 1 procs for 1000 steps with 8000 atoms Performance: 0.357 ns/day, 67.220 hours/ns, 4.132 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 239.86 | 239.86 | 239.86 | 0.0 | 99.12 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.27946 | 0.27946 | 0.27946 | 0.0 | 0.12 Output | 0.00030795 | 0.00030795 | 0.00030795 | 0.0 | 0.00 Modify | 1.6615 | 1.6615 | 1.6615 | 0.0 | 0.69 Other | | 0.187 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8597.00 ave 8597 max 8597 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 577648.0 ave 577648 max 577648 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 577648 Ave neighs/atom = 72.206000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 162201.371479212 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0