# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.430949777364731*${_u_distance} variable latticeconst_converted equal 5.430949777364731*1 lattice diamond ${latticeconst_converted} lattice diamond 5.43094977736473 Lattice spacing in x,y,z = 5.43095 5.43095 5.43095 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (54.3095 54.3095 54.3095) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms create_atoms CPU = 0.000823975 secs variable mass_converted equal 28.0855*${_u_mass} variable mass_converted equal 28.0855*1 # specify which KIM Model to use pair_style kim SW_StillingerWeber_1985_Si__MO_405512056662_005 pair_coeff * * Si mass 1 ${mass_converted} mass 1 28.0855 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 160187.033967556 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 160187.033967556/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 160187.033967556/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 160187.033967556/(1*1*${_u_distance}) variable V0_metal equal 160187.033967556/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 160187.033967556*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 160187.033967556 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.77118 ghost atom cutoff = 5.77118 binsize = 2.88559, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5.77118 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -34429.455 -34429.455 -34691.2 -34691.2 253.15 253.15 160187.03 160187.03 1745.3002 1745.3002 1000 -34145.968 -34145.968 -34417.36 -34417.36 262.47989 262.47989 160730.74 160730.74 -244.10078 -244.10078 Loop time of 84.3062 on 1 procs for 1000 steps with 8000 atoms Performance: 1.025 ns/day, 23.418 hours/ns, 11.862 timesteps/s 41.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 83.287 | 83.287 | 83.287 | 0.0 | 98.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19357 | 0.19357 | 0.19357 | 0.0 | 0.23 Output | 5.6028e-05 | 5.6028e-05 | 5.6028e-05 | 0.0 | 0.00 Modify | 0.72918 | 0.72918 | 0.72918 | 0.0 | 0.86 Other | | 0.0964 | | | 0.11 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 272000 ave 272000 max 272000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 272000 Ave neighs/atom = 34 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.311 | 4.311 | 4.311 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -34145.968 -34145.968 -34417.36 -34417.36 262.47989 262.47989 160730.74 160730.74 -244.10078 -244.10078 2000 -34173.065 -34173.065 -34425.314 -34425.314 243.9658 243.9658 160670.66 160670.66 -62.995726 -62.995726 Loop time of 93.9135 on 1 procs for 1000 steps with 8000 atoms Performance: 0.920 ns/day, 26.087 hours/ns, 10.648 timesteps/s 41.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 92.895 | 92.895 | 92.895 | 0.0 | 98.92 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15265 | 0.15265 | 0.15265 | 0.0 | 0.16 Output | 5.3883e-05 | 5.3883e-05 | 5.3883e-05 | 0.0 | 0.00 Modify | 0.74999 | 0.74999 | 0.74999 | 0.0 | 0.80 Other | | 0.1159 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 274078 ave 274078 max 274078 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 274078 Ave neighs/atom = 34.2597 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.311 | 4.311 | 4.311 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -34173.065 -34173.065 -34425.314 -34425.314 243.9658 243.9658 160670.66 160670.66 -62.995726 -62.995726 3000 -34162.899 -34162.899 -34430 -34430 258.32982 258.32982 160603.76 160603.76 372.00745 372.00745 Loop time of 94.7322 on 1 procs for 1000 steps with 8000 atoms Performance: 0.912 ns/day, 26.314 hours/ns, 10.556 timesteps/s 41.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 93.862 | 93.862 | 93.862 | 0.0 | 99.08 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15373 | 0.15373 | 0.15373 | 0.0 | 0.16 Output | 5.2929e-05 | 5.2929e-05 | 5.2929e-05 | 0.0 | 0.00 Modify | 0.62998 | 0.62998 | 0.62998 | 0.0 | 0.67 Other | | 0.08634 | | | 0.09 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 273818 ave 273818 max 273818 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 273818 Ave neighs/atom = 34.2272 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.311 | 4.311 | 4.311 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -34162.899 -34162.899 -34430 -34430 258.32982 258.32982 160603.76 160603.76 372.00745 372.00745 4000 -34164.776 -34164.776 -34426.156 -34426.156 252.79668 252.79668 160732.06 160732.06 -449.25904 -449.25904 Loop time of 88.1468 on 1 procs for 1000 steps with 8000 atoms Performance: 0.980 ns/day, 24.485 hours/ns, 11.345 timesteps/s 44.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 87.387 | 87.387 | 87.387 | 0.0 | 99.14 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.17381 | 0.17381 | 0.17381 | 0.0 | 0.20 Output | 6.1035e-05 | 6.1035e-05 | 6.1035e-05 | 0.0 | 0.00 Modify | 0.5094 | 0.5094 | 0.5094 | 0.0 | 0.58 Other | | 0.07637 | | | 0.09 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 273860 ave 273860 max 273860 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 273860 Ave neighs/atom = 34.2325 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.311 | 4.311 | 4.311 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -34164.776 -34164.776 -34426.156 -34426.156 252.79668 252.79668 160732.06 160732.06 -449.25904 -449.25904 5000 -34166.691 -34166.691 -34422.041 -34422.041 246.96582 246.96582 160653.27 160653.27 23.114184 23.114184 Loop time of 87.5476 on 1 procs for 1000 steps with 8000 atoms Performance: 0.987 ns/day, 24.319 hours/ns, 11.422 timesteps/s 44.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 86.726 | 86.726 | 86.726 | 0.0 | 99.06 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13332 | 0.13332 | 0.13332 | 0.0 | 0.15 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.62168 | 0.62168 | 0.62168 | 0.0 | 0.71 Other | | 0.06647 | | | 0.08 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 273964 ave 273964 max 273964 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 273964 Ave neighs/atom = 34.2455 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.058085881011, Press = 168.303063576434 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.311 | 4.311 | 4.311 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -34166.691 -34166.691 -34422.041 -34422.041 246.96582 246.96582 160653.27 160653.27 23.114184 23.114184 6000 -34161.301 -34161.301 -34424.889 -34424.889 254.9323 254.9323 160528.92 160528.92 932.84266 932.84266 Loop time of 89.8684 on 1 procs for 1000 steps with 8000 atoms Performance: 0.961 ns/day, 24.963 hours/ns, 11.127 timesteps/s 43.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 88.878 | 88.878 | 88.878 | 0.0 | 98.90 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23016 | 0.23016 | 0.23016 | 0.0 | 0.26 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.70395 | 0.70395 | 0.70395 | 0.0 | 0.78 Other | | 0.05632 | | | 0.06 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 274172 ave 274172 max 274172 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 274172 Ave neighs/atom = 34.2715 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.829031244602, Press = -1.8221021570452 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.311 | 4.311 | 4.311 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -34161.301 -34161.301 -34424.889 -34424.889 254.9323 254.9323 160528.92 160528.92 932.84266 932.84266 7000 -34170.002 -34170.002 -34426.852 -34426.852 248.41531 248.41531 160862.56 160862.56 -1277.987 -1277.987 Loop time of 87.7277 on 1 procs for 1000 steps with 8000 atoms Performance: 0.985 ns/day, 24.369 hours/ns, 11.399 timesteps/s 44.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 86.603 | 86.603 | 86.603 | 0.0 | 98.72 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.27365 | 0.27365 | 0.27365 | 0.0 | 0.31 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.72598 | 0.72598 | 0.72598 | 0.0 | 0.83 Other | | 0.1253 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 273870 ave 273870 max 273870 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 273870 Ave neighs/atom = 34.2338 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.05538029275, Press = -4.05226009531581 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.311 | 4.311 | 4.311 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -34170.002 -34170.002 -34426.852 -34426.852 248.41531 248.41531 160862.56 160862.56 -1277.987 -1277.987 8000 -34163.572 -34163.572 -34423.497 -34423.497 251.39027 251.39027 160619.57 160619.57 249.52759 249.52759 Loop time of 89.6709 on 1 procs for 1000 steps with 8000 atoms Performance: 0.964 ns/day, 24.909 hours/ns, 11.152 timesteps/s 43.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 88.887 | 88.887 | 88.887 | 0.0 | 99.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13344 | 0.13344 | 0.13344 | 0.0 | 0.15 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.56429 | 0.56429 | 0.56429 | 0.0 | 0.63 Other | | 0.0864 | | | 0.10 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 273860 ave 273860 max 273860 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 273860 Ave neighs/atom = 34.2325 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.093654191912, Press = 7.51204673744396 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.311 | 4.311 | 4.311 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -34163.572 -34163.572 -34423.497 -34423.497 251.39027 251.39027 160619.57 160619.57 249.52759 249.52759 9000 -34167.454 -34167.454 -34429.893 -34429.893 253.82096 253.82096 160634.99 160634.99 256.38421 256.38421 Loop time of 89.3602 on 1 procs for 1000 steps with 8000 atoms Performance: 0.967 ns/day, 24.822 hours/ns, 11.191 timesteps/s 43.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 88.422 | 88.422 | 88.422 | 0.0 | 98.95 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19393 | 0.19393 | 0.19393 | 0.0 | 0.22 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.65779 | 0.65779 | 0.65779 | 0.0 | 0.74 Other | | 0.08645 | | | 0.10 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 274222 ave 274222 max 274222 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 274222 Ave neighs/atom = 34.2777 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.07599095634, Press = -1.44409070897596 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.311 | 4.311 | 4.311 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -34167.454 -34167.454 -34429.893 -34429.893 253.82096 253.82096 160634.99 160634.99 256.38421 256.38421 10000 -34164.068 -34164.068 -34422.161 -34422.161 249.61735 249.61735 160709.63 160709.63 -339.04604 -339.04604 Loop time of 78.723 on 1 procs for 1000 steps with 8000 atoms Performance: 1.098 ns/day, 21.867 hours/ns, 12.703 timesteps/s 49.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 77.808 | 77.808 | 77.808 | 0.0 | 98.84 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11889 | 0.11889 | 0.11889 | 0.0 | 0.15 Output | 7.0095e-05 | 7.0095e-05 | 7.0095e-05 | 0.0 | 0.00 Modify | 0.70005 | 0.70005 | 0.70005 | 0.0 | 0.89 Other | | 0.09604 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 273794 ave 273794 max 273794 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 273794 Ave neighs/atom = 34.2242 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.117188310566, Press = 0.821101448643441 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.311 | 4.311 | 4.311 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -34164.068 -34164.068 -34422.161 -34422.161 249.61735 249.61735 160709.63 160709.63 -339.04604 -339.04604 11000 -34162.554 -34162.554 -34426.238 -34426.238 255.02548 255.02548 160651.61 160651.61 66.19997 66.19997 Loop time of 76.1892 on 1 procs for 1000 steps with 8000 atoms Performance: 1.134 ns/day, 21.164 hours/ns, 13.125 timesteps/s 51.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 75.438 | 75.438 | 75.438 | 0.0 | 99.01 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.093695 | 0.093695 | 0.093695 | 0.0 | 0.12 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.6201 | 0.6201 | 0.6201 | 0.0 | 0.81 Other | | 0.03701 | | | 0.05 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 274068 ave 274068 max 274068 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 274068 Ave neighs/atom = 34.2585 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.017119197823, Press = 3.62584400487109 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.311 | 4.311 | 4.311 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -34162.554 -34162.554 -34426.238 -34426.238 255.02548 255.02548 160651.61 160651.61 66.19997 66.19997 12000 -34165.76 -34165.76 -34424.869 -34424.869 250.60057 250.60057 160543.72 160543.72 744.29306 744.29306 Loop time of 67.4888 on 1 procs for 1000 steps with 8000 atoms Performance: 1.280 ns/day, 18.747 hours/ns, 14.817 timesteps/s 57.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 66.964 | 66.964 | 66.964 | 0.0 | 99.22 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.074846 | 0.074846 | 0.074846 | 0.0 | 0.11 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.39233 | 0.39233 | 0.39233 | 0.0 | 0.58 Other | | 0.05794 | | | 0.09 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 274156 ave 274156 max 274156 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 274156 Ave neighs/atom = 34.2695 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.182428802833, Press = -2.62033929163429 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.311 | 4.311 | 4.311 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -34165.76 -34165.76 -34424.869 -34424.869 250.60057 250.60057 160543.72 160543.72 744.29306 744.29306 13000 -34169.003 -34169.003 -34428.87 -34428.87 251.33382 251.33382 160761.95 160761.95 -622.97478 -622.97478 Loop time of 72.2809 on 1 procs for 1000 steps with 8000 atoms Performance: 1.195 ns/day, 20.078 hours/ns, 13.835 timesteps/s 53.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 71.389 | 71.389 | 71.389 | 0.0 | 98.77 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.15574 | 0.15574 | 0.15574 | 0.0 | 0.22 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.67847 | 0.67847 | 0.67847 | 0.0 | 0.94 Other | | 0.05772 | | | 0.08 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 274050 ave 274050 max 274050 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 274050 Ave neighs/atom = 34.2563 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.15820362008, Press = 1.02770634929512 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.311 | 4.311 | 4.311 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -34169.003 -34169.003 -34428.87 -34428.87 251.33382 251.33382 160761.95 160761.95 -622.97478 -622.97478 14000 -34162.743 -34162.743 -34430.595 -34430.595 259.05715 259.05715 160637.59 160637.59 250.01266 250.01266 Loop time of 69.7101 on 1 procs for 1000 steps with 8000 atoms Performance: 1.239 ns/day, 19.364 hours/ns, 14.345 timesteps/s 56.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.939 | 68.939 | 68.939 | 0.0 | 98.89 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14037 | 0.14037 | 0.14037 | 0.0 | 0.20 Output | 4.5061e-05 | 4.5061e-05 | 4.5061e-05 | 0.0 | 0.00 Modify | 0.59241 | 0.59241 | 0.59241 | 0.0 | 0.85 Other | | 0.03803 | | | 0.05 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 273908 ave 273908 max 273908 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 273908 Ave neighs/atom = 34.2385 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.097368592171, Press = 1.05239518221634 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.311 | 4.311 | 4.311 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -34162.743 -34162.743 -34430.595 -34430.595 259.05715 259.05715 160637.59 160637.59 250.01266 250.01266 15000 -34160.878 -34160.878 -34423.738 -34423.738 254.22859 254.22859 160662.08 160662.08 42.920148 42.920148 Loop time of 64.3296 on 1 procs for 1000 steps with 8000 atoms Performance: 1.343 ns/day, 17.869 hours/ns, 15.545 timesteps/s 60.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.755 | 63.755 | 63.755 | 0.0 | 99.11 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.055521 | 0.055521 | 0.055521 | 0.0 | 0.09 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.46135 | 0.46135 | 0.46135 | 0.0 | 0.72 Other | | 0.0579 | | | 0.09 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 273804 ave 273804 max 273804 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 273804 Ave neighs/atom = 34.2255 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.110554250547, Press = -0.633163786041883 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.311 | 4.311 | 4.311 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -34160.878 -34160.878 -34423.738 -34423.738 254.22859 254.22859 160662.08 160662.08 42.920148 42.920148 16000 -34167.922 -34167.922 -34432.116 -34432.116 255.51807 255.51807 160769.53 160769.53 -667.0485 -667.0485 Loop time of 67.8948 on 1 procs for 1000 steps with 8000 atoms Performance: 1.273 ns/day, 18.860 hours/ns, 14.729 timesteps/s 57.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 67.278 | 67.278 | 67.278 | 0.0 | 99.09 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.096153 | 0.096153 | 0.096153 | 0.0 | 0.14 Output | 4.3154e-05 | 4.3154e-05 | 4.3154e-05 | 0.0 | 0.00 Modify | 0.46212 | 0.46212 | 0.46212 | 0.0 | 0.68 Other | | 0.05863 | | | 0.09 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 273922 ave 273922 max 273922 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 273922 Ave neighs/atom = 34.2403 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.206329520193, Press = 0.634028658002476 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.311 | 4.311 | 4.311 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -34167.922 -34167.922 -34432.116 -34432.116 255.51807 255.51807 160769.53 160769.53 -667.0485 -667.0485 17000 -34163.614 -34163.614 -34427.685 -34427.685 255.40043 255.40043 160581.79 160581.79 481.29543 481.29543 Loop time of 62.0507 on 1 procs for 1000 steps with 8000 atoms Performance: 1.392 ns/day, 17.236 hours/ns, 16.116 timesteps/s 63.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 61.399 | 61.399 | 61.399 | 0.0 | 98.95 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11626 | 0.11626 | 0.11626 | 0.0 | 0.19 Output | 4.9114e-05 | 4.9114e-05 | 4.9114e-05 | 0.0 | 0.00 Modify | 0.46377 | 0.46377 | 0.46377 | 0.0 | 0.75 Other | | 0.07151 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 273806 ave 273806 max 273806 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 273806 Ave neighs/atom = 34.2257 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.202335547341, Press = 0.681388208030554 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.311 | 4.311 | 4.311 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -34163.614 -34163.614 -34427.685 -34427.685 255.40043 255.40043 160581.79 160581.79 481.29543 481.29543 18000 -34165.935 -34165.935 -34438.255 -34438.255 263.37775 263.37775 160808.78 160808.78 -877.54687 -877.54687 Loop time of 68.4394 on 1 procs for 1000 steps with 8000 atoms Performance: 1.262 ns/day, 19.011 hours/ns, 14.611 timesteps/s 57.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 67.781 | 67.781 | 67.781 | 0.0 | 99.04 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.056932 | 0.056932 | 0.056932 | 0.0 | 0.08 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.56419 | 0.56419 | 0.56419 | 0.0 | 0.82 Other | | 0.03773 | | | 0.06 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 274054 ave 274054 max 274054 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 274054 Ave neighs/atom = 34.2567 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.245427580189, Press = -1.33046860242739 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.311 | 4.311 | 4.311 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -34165.935 -34165.935 -34438.255 -34438.255 263.37775 263.37775 160808.78 160808.78 -877.54687 -877.54687 19000 -34161.342 -34161.342 -34421.339 -34421.339 251.45945 251.45945 160655.77 160655.77 110.4064 110.4064 Loop time of 63.5314 on 1 procs for 1000 steps with 8000 atoms Performance: 1.360 ns/day, 17.648 hours/ns, 15.740 timesteps/s 61.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 62.762 | 62.762 | 62.762 | 0.0 | 98.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12655 | 0.12655 | 0.12655 | 0.0 | 0.20 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.57498 | 0.57498 | 0.57498 | 0.0 | 0.91 Other | | 0.06781 | | | 0.11 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 273622 ave 273622 max 273622 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 273622 Ave neighs/atom = 34.2028 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.276397820173, Press = 3.03753034608617 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.311 | 4.311 | 4.311 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -34161.342 -34161.342 -34421.339 -34421.339 251.45945 251.45945 160655.77 160655.77 110.4064 110.4064 20000 -34169.177 -34169.177 -34430.145 -34430.145 252.39839 252.39839 160596.27 160596.27 451.34786 451.34786 Loop time of 69.2845 on 1 procs for 1000 steps with 8000 atoms Performance: 1.247 ns/day, 19.246 hours/ns, 14.433 timesteps/s 56.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.595 | 68.595 | 68.595 | 0.0 | 99.00 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.090333 | 0.090333 | 0.090333 | 0.0 | 0.13 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.54106 | 0.54106 | 0.54106 | 0.0 | 0.78 Other | | 0.05802 | | | 0.08 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 273970 ave 273970 max 273970 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 273970 Ave neighs/atom = 34.2463 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 160666.298993708 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0