# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.177976079285145*${_u_distance} variable latticeconst_converted equal 5.177976079285145*1 lattice diamond ${latticeconst_converted} lattice diamond 5.17797607928514 Lattice spacing in x,y,z = 5.17798 5.17798 5.17798 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (51.7798 51.7798 51.7798) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms create_atoms CPU = 0.000801086 secs variable mass_converted equal 28.0855*${_u_mass} variable mass_converted equal 28.0855*1 # specify which KIM Model to use pair_style kim SW_ZhangXieHu_2014OptimizedSW2_Si__MO_475612090600_004 pair_coeff * * Si mass 1 ${mass_converted} mass 1 28.0855 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 138828.975696945 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 138828.975696945/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 138828.975696945/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 138828.975696945/(1*1*${_u_distance}) variable V0_metal equal 138828.975696945/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 138828.975696945*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 138828.975696945 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.59552 ghost atom cutoff = 5.59552 binsize = 2.79776, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5.59552 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -28387.234 -28387.234 -28711.016 -28711.016 313.15 313.15 138828.98 138828.98 2491.1031 2491.1031 1000 -28035.798 -28035.798 -28362.342 -28362.342 315.8207 315.8207 139707.79 139707.79 -778.49034 -778.49034 Loop time of 70.4657 on 1 procs for 1000 steps with 8000 atoms Performance: 1.226 ns/day, 19.574 hours/ns, 14.191 timesteps/s 53.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.738 | 69.738 | 69.738 | 0.0 | 98.97 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.095048 | 0.095048 | 0.095048 | 0.0 | 0.13 Output | 5.5075e-05 | 5.5075e-05 | 5.5075e-05 | 0.0 | 0.00 Modify | 0.57457 | 0.57457 | 0.57457 | 0.0 | 0.82 Other | | 0.05754 | | | 0.08 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 272000 ave 272000 max 272000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 272000 Ave neighs/atom = 34 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -28035.798 -28035.798 -28362.342 -28362.342 315.8207 315.8207 139707.79 139707.79 -778.49034 -778.49034 2000 -28068.975 -28068.975 -28394.835 -28394.835 315.1599 315.1599 139473.77 139473.77 666.66096 666.66096 Loop time of 76.2546 on 1 procs for 1000 steps with 8000 atoms Performance: 1.133 ns/day, 21.182 hours/ns, 13.114 timesteps/s 55.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 75.587 | 75.587 | 75.587 | 0.0 | 99.12 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.096024 | 0.096024 | 0.096024 | 0.0 | 0.13 Output | 6.9141e-05 | 6.9141e-05 | 6.9141e-05 | 0.0 | 0.00 Modify | 0.49378 | 0.49378 | 0.49378 | 0.0 | 0.65 Other | | 0.07819 | | | 0.10 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 294732 ave 294732 max 294732 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 294732 Ave neighs/atom = 36.8415 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -28068.975 -28068.975 -28394.835 -28394.835 315.1599 315.1599 139473.77 139473.77 666.66096 666.66096 3000 -28053.69 -28053.69 -28398.457 -28398.457 333.44571 333.44571 139590.63 139590.63 -41.47697 -41.47697 Loop time of 75.0166 on 1 procs for 1000 steps with 8000 atoms Performance: 1.152 ns/day, 20.838 hours/ns, 13.330 timesteps/s 56.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 74.131 | 74.131 | 74.131 | 0.0 | 98.82 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13704 | 0.13704 | 0.13704 | 0.0 | 0.18 Output | 5.3883e-05 | 5.3883e-05 | 5.3883e-05 | 0.0 | 0.00 Modify | 0.65703 | 0.65703 | 0.65703 | 0.0 | 0.88 Other | | 0.09111 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 294402 ave 294402 max 294402 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 294402 Ave neighs/atom = 36.8002 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -28053.69 -28053.69 -28398.457 -28398.457 333.44571 333.44571 139590.63 139590.63 -41.47697 -41.47697 4000 -28061.478 -28061.478 -28378.991 -28378.991 307.08725 307.08725 139575.78 139575.78 -109.33058 -109.33058 Loop time of 68.8475 on 1 procs for 1000 steps with 8000 atoms Performance: 1.255 ns/day, 19.124 hours/ns, 14.525 timesteps/s 61.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.121 | 68.121 | 68.121 | 0.0 | 98.94 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1163 | 0.1163 | 0.1163 | 0.0 | 0.17 Output | 5.1022e-05 | 5.1022e-05 | 5.1022e-05 | 0.0 | 0.00 Modify | 0.55265 | 0.55265 | 0.55265 | 0.0 | 0.80 Other | | 0.05801 | | | 0.08 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 293848 ave 293848 max 293848 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 293848 Ave neighs/atom = 36.731 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -28061.478 -28061.478 -28378.991 -28378.991 307.08725 307.08725 139575.78 139575.78 -109.33058 -109.33058 5000 -28061.307 -28061.307 -28388.05 -28388.05 316.01363 316.01363 139471.57 139471.57 648.2542 648.2542 Loop time of 71.6331 on 1 procs for 1000 steps with 8000 atoms Performance: 1.206 ns/day, 19.898 hours/ns, 13.960 timesteps/s 59.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 70.885 | 70.885 | 70.885 | 0.0 | 98.96 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.074631 | 0.074631 | 0.074631 | 0.0 | 0.10 Output | 4.7922e-05 | 4.7922e-05 | 4.7922e-05 | 0.0 | 0.00 Modify | 0.63534 | 0.63534 | 0.63534 | 0.0 | 0.89 Other | | 0.03806 | | | 0.05 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 294760 ave 294760 max 294760 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 294760 Ave neighs/atom = 36.845 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 314.777104492895, Press = 394.925004266297 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -28061.307 -28061.307 -28388.05 -28388.05 316.01363 316.01363 139471.57 139471.57 648.2542 648.2542 6000 -28056.156 -28056.156 -28374.257 -28374.257 307.6557 307.6557 139769.58 139769.58 -1416.5424 -1416.5424 Loop time of 69.2106 on 1 procs for 1000 steps with 8000 atoms Performance: 1.248 ns/day, 19.225 hours/ns, 14.449 timesteps/s 61.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.219 | 68.219 | 68.219 | 0.0 | 98.57 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13677 | 0.13677 | 0.13677 | 0.0 | 0.20 Output | 4.3869e-05 | 4.3869e-05 | 4.3869e-05 | 0.0 | 0.00 Modify | 0.77595 | 0.77595 | 0.77595 | 0.0 | 1.12 Other | | 0.07925 | | | 0.11 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 295102 ave 295102 max 295102 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 295102 Ave neighs/atom = 36.8877 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.919566289938, Press = 0.613084751222015 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -28056.156 -28056.156 -28374.257 -28374.257 307.6557 307.6557 139769.58 139769.58 -1416.5424 -1416.5424 7000 -28062.642 -28062.642 -28381.677 -28381.677 308.55877 308.55877 139459.61 139459.61 666.97439 666.97439 Loop time of 74.5782 on 1 procs for 1000 steps with 8000 atoms Performance: 1.159 ns/day, 20.716 hours/ns, 13.409 timesteps/s 56.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 73.928 | 73.928 | 73.928 | 0.0 | 99.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.078863 | 0.078863 | 0.078863 | 0.0 | 0.11 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.49227 | 0.49227 | 0.49227 | 0.0 | 0.66 Other | | 0.07888 | | | 0.11 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 294128 ave 294128 max 294128 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 294128 Ave neighs/atom = 36.766 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.08588209647, Press = 8.34479064128923 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -28062.642 -28062.642 -28381.677 -28381.677 308.55877 308.55877 139459.61 139459.61 666.97439 666.97439 8000 -28053.657 -28053.657 -28378.727 -28378.727 314.39565 314.39565 139643.63 139643.63 -395.01012 -395.01012 Loop time of 69.1773 on 1 procs for 1000 steps with 8000 atoms Performance: 1.249 ns/day, 19.216 hours/ns, 14.456 timesteps/s 61.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.579 | 68.579 | 68.579 | 0.0 | 99.14 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.076826 | 0.076826 | 0.076826 | 0.0 | 0.11 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.4623 | 0.4623 | 0.4623 | 0.0 | 0.67 Other | | 0.05906 | | | 0.09 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 295408 ave 295408 max 295408 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 295408 Ave neighs/atom = 36.926 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.083154999703, Press = 8.25967604389176 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -28053.657 -28053.657 -28378.727 -28378.727 314.39565 314.39565 139643.63 139643.63 -395.01012 -395.01012 9000 -28062.095 -28062.095 -28387.891 -28387.891 315.09789 315.09789 139502.5 139502.5 384.47224 384.47224 Loop time of 70.7961 on 1 procs for 1000 steps with 8000 atoms Performance: 1.220 ns/day, 19.666 hours/ns, 14.125 timesteps/s 59.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 70.171 | 70.171 | 70.171 | 0.0 | 99.12 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.097022 | 0.097022 | 0.097022 | 0.0 | 0.14 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.48965 | 0.48965 | 0.48965 | 0.0 | 0.69 Other | | 0.03868 | | | 0.05 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 293846 ave 293846 max 293846 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 293846 Ave neighs/atom = 36.7308 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.082909463896, Press = 2.49023415162928 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -28062.095 -28062.095 -28387.891 -28387.891 315.09789 315.09789 139502.5 139502.5 384.47224 384.47224 10000 -28056.331 -28056.331 -28392.311 -28392.311 324.94752 324.94752 139607.83 139607.83 -269.29933 -269.29933 Loop time of 68.8279 on 1 procs for 1000 steps with 8000 atoms Performance: 1.255 ns/day, 19.119 hours/ns, 14.529 timesteps/s 61.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.293 | 68.293 | 68.293 | 0.0 | 99.22 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.075879 | 0.075879 | 0.075879 | 0.0 | 0.11 Output | 6.7949e-05 | 6.7949e-05 | 6.7949e-05 | 0.0 | 0.00 Modify | 0.42137 | 0.42137 | 0.42137 | 0.0 | 0.61 Other | | 0.03797 | | | 0.06 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 294996 ave 294996 max 294996 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 294996 Ave neighs/atom = 36.8745 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.156968808956, Press = 6.84727039624244 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -28056.331 -28056.331 -28392.311 -28392.311 324.94752 324.94752 139607.83 139607.83 -269.29933 -269.29933 11000 -28056.191 -28056.191 -28382.233 -28382.233 315.33512 315.33512 139592.06 139592.06 -128.25971 -128.25971 Loop time of 72.9765 on 1 procs for 1000 steps with 8000 atoms Performance: 1.184 ns/day, 20.271 hours/ns, 13.703 timesteps/s 57.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 72.259 | 72.259 | 72.259 | 0.0 | 99.02 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11666 | 0.11666 | 0.11666 | 0.0 | 0.16 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.52235 | 0.52235 | 0.52235 | 0.0 | 0.72 Other | | 0.07868 | | | 0.11 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 294204 ave 294204 max 294204 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 294204 Ave neighs/atom = 36.7755 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.125247758324, Press = -1.46296086416633 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -28056.191 -28056.191 -28382.233 -28382.233 315.33512 315.33512 139592.06 139592.06 -128.25971 -128.25971 12000 -28065.478 -28065.478 -28388.158 -28388.158 312.08378 312.08378 139432.26 139432.26 902.71709 902.71709 Loop time of 70.7101 on 1 procs for 1000 steps with 8000 atoms Performance: 1.222 ns/day, 19.642 hours/ns, 14.142 timesteps/s 59.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.996 | 69.996 | 69.996 | 0.0 | 98.99 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.07584 | 0.07584 | 0.07584 | 0.0 | 0.11 Output | 6.3896e-05 | 6.3896e-05 | 6.3896e-05 | 0.0 | 0.00 Modify | 0.59926 | 0.59926 | 0.59926 | 0.0 | 0.85 Other | | 0.03846 | | | 0.05 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 294514 ave 294514 max 294514 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 294514 Ave neighs/atom = 36.8143 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.121624000129, Press = 8.14521492372589 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -28065.478 -28065.478 -28388.158 -28388.158 312.08378 312.08378 139432.26 139432.26 902.71709 902.71709 13000 -28059.077 -28059.077 -28383.977 -28383.977 314.23137 314.23137 139641.57 139641.57 -546.99316 -546.99316 Loop time of 70.1629 on 1 procs for 1000 steps with 8000 atoms Performance: 1.231 ns/day, 19.490 hours/ns, 14.253 timesteps/s 60.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.365 | 69.365 | 69.365 | 0.0 | 98.86 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.096446 | 0.096446 | 0.096446 | 0.0 | 0.14 Output | 4.3154e-05 | 4.3154e-05 | 4.3154e-05 | 0.0 | 0.00 Modify | 0.60298 | 0.60298 | 0.60298 | 0.0 | 0.86 Other | | 0.09835 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 295252 ave 295252 max 295252 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 295252 Ave neighs/atom = 36.9065 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.004707731683, Press = 1.7351661524164 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -28059.077 -28059.077 -28383.977 -28383.977 314.23137 314.23137 139641.57 139641.57 -546.99316 -546.99316 14000 -28064.683 -28064.683 -28383.209 -28383.209 308.06589 308.06589 139497.59 139497.59 454.85304 454.85304 Loop time of 69.7116 on 1 procs for 1000 steps with 8000 atoms Performance: 1.239 ns/day, 19.364 hours/ns, 14.345 timesteps/s 60.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.965 | 68.965 | 68.965 | 0.0 | 98.93 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11595 | 0.11595 | 0.11595 | 0.0 | 0.17 Output | 4.3154e-05 | 4.3154e-05 | 4.3154e-05 | 0.0 | 0.00 Modify | 0.57203 | 0.57203 | 0.57203 | 0.0 | 0.82 Other | | 0.05834 | | | 0.08 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 294390 ave 294390 max 294390 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 294390 Ave neighs/atom = 36.7987 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.859704261786, Press = 2.42138376583201 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -28064.683 -28064.683 -28383.209 -28383.209 308.06589 308.06589 139497.59 139497.59 454.85304 454.85304 15000 -28056.115 -28056.115 -28382.626 -28382.626 315.78872 315.78872 139632.87 139632.87 -419.10883 -419.10883 Loop time of 70.0712 on 1 procs for 1000 steps with 8000 atoms Performance: 1.233 ns/day, 19.464 hours/ns, 14.271 timesteps/s 60.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.36 | 69.36 | 69.36 | 0.0 | 98.98 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.05657 | 0.05657 | 0.05657 | 0.0 | 0.08 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.58107 | 0.58107 | 0.58107 | 0.0 | 0.83 Other | | 0.07358 | | | 0.11 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 294768 ave 294768 max 294768 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 294768 Ave neighs/atom = 36.846 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.772739780198, Press = 2.5303473409827 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -28056.115 -28056.115 -28382.626 -28382.626 315.78872 315.78872 139632.87 139632.87 -419.10883 -419.10883 16000 -28066.453 -28066.453 -28382.202 -28382.202 305.38075 305.38075 139456.82 139456.82 698.21131 698.21131 Loop time of 69.2169 on 1 procs for 1000 steps with 8000 atoms Performance: 1.248 ns/day, 19.227 hours/ns, 14.447 timesteps/s 60.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 68.597 | 68.597 | 68.597 | 0.0 | 99.10 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.059914 | 0.059914 | 0.059914 | 0.0 | 0.09 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.52089 | 0.52089 | 0.52089 | 0.0 | 0.75 Other | | 0.0389 | | | 0.06 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 294232 ave 294232 max 294232 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 294232 Ave neighs/atom = 36.779 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.687002046262, Press = 0.103060693245578 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -28066.453 -28066.453 -28382.202 -28382.202 305.38075 305.38075 139456.82 139456.82 698.21131 698.21131 17000 -28059.437 -28059.437 -28381.441 -28381.441 311.43067 311.43067 139639.01 139639.01 -551.01194 -551.01194 Loop time of 74.4596 on 1 procs for 1000 steps with 8000 atoms Performance: 1.160 ns/day, 20.683 hours/ns, 13.430 timesteps/s 56.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 73.676 | 73.676 | 73.676 | 0.0 | 98.95 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11604 | 0.11604 | 0.11604 | 0.0 | 0.16 Output | 4.4107e-05 | 4.4107e-05 | 4.4107e-05 | 0.0 | 0.00 Modify | 0.60968 | 0.60968 | 0.60968 | 0.0 | 0.82 Other | | 0.05829 | | | 0.08 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 295338 ave 295338 max 295338 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 295338 Ave neighs/atom = 36.9173 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.705018716527, Press = 4.22504423342787 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -28059.437 -28059.437 -28381.441 -28381.441 311.43067 311.43067 139639.01 139639.01 -551.01194 -551.01194 18000 -28051.067 -28051.067 -28384.036 -28384.036 322.03589 322.03589 139564.65 139564.65 62.518551 62.518551 Loop time of 65.2487 on 1 procs for 1000 steps with 8000 atoms Performance: 1.324 ns/day, 18.125 hours/ns, 15.326 timesteps/s 64.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 64.669 | 64.669 | 64.669 | 0.0 | 99.11 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.05709 | 0.05709 | 0.05709 | 0.0 | 0.09 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.48401 | 0.48401 | 0.48401 | 0.0 | 0.74 Other | | 0.03875 | | | 0.06 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 294442 ave 294442 max 294442 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 294442 Ave neighs/atom = 36.8053 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.763106629062, Press = -0.046594971892446 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -28051.067 -28051.067 -28384.036 -28384.036 322.03589 322.03589 139564.65 139564.65 62.518551 62.518551 19000 -28061.722 -28061.722 -28385.15 -28385.15 312.80754 312.80754 139548.93 139548.93 84.906104 84.906104 Loop time of 63.904 on 1 procs for 1000 steps with 8000 atoms Performance: 1.352 ns/day, 17.751 hours/ns, 15.648 timesteps/s 65.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.32 | 63.32 | 63.32 | 0.0 | 99.09 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.078261 | 0.078261 | 0.078261 | 0.0 | 0.12 Output | 4.4107e-05 | 4.4107e-05 | 4.4107e-05 | 0.0 | 0.00 Modify | 0.46652 | 0.46652 | 0.46652 | 0.0 | 0.73 Other | | 0.03968 | | | 0.06 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 294360 ave 294360 max 294360 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 294360 Ave neighs/atom = 36.795 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.889897441573, Press = 1.81794322803564 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -28061.722 -28061.722 -28385.15 -28385.15 312.80754 312.80754 139548.93 139548.93 84.906104 84.906104 20000 -28056.863 -28056.863 -28379.494 -28379.494 312.03614 312.03614 139610.49 139610.49 -309.42864 -309.42864 Loop time of 62.5569 on 1 procs for 1000 steps with 8000 atoms Performance: 1.381 ns/day, 17.377 hours/ns, 15.985 timesteps/s 67.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 61.709 | 61.709 | 61.709 | 0.0 | 98.64 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11996 | 0.11996 | 0.11996 | 0.0 | 0.19 Output | 6.0081e-05 | 6.0081e-05 | 6.0081e-05 | 0.0 | 0.00 Modify | 0.68819 | 0.68819 | 0.68819 | 0.0 | 1.10 Other | | 0.03995 | | | 0.06 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 294822 ave 294822 max 294822 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 294822 Ave neighs/atom = 36.8528 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.950463389461, Press = 0.673443017864757 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -28056.863 -28056.863 -28379.494 -28379.494 312.03614 312.03614 139610.49 139610.49 -309.42864 -309.42864 21000 -28063.324 -28063.324 -28383.316 -28383.316 309.48447 309.48447 139488.09 139488.09 508.52741 508.52741 Loop time of 63.813 on 1 procs for 1000 steps with 8000 atoms Performance: 1.354 ns/day, 17.726 hours/ns, 15.671 timesteps/s 66.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 63.058 | 63.058 | 63.058 | 0.0 | 98.82 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12186 | 0.12186 | 0.12186 | 0.0 | 0.19 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.59178 | 0.59178 | 0.59178 | 0.0 | 0.93 Other | | 0.04096 | | | 0.06 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 294880 ave 294880 max 294880 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 294880 Ave neighs/atom = 36.86 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.972700231587, Press = 1.48584510808633 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -28063.324 -28063.324 -28383.316 -28383.316 309.48447 309.48447 139488.09 139488.09 508.52741 508.52741 22000 -28055.053 -28055.053 -28381.428 -28381.428 315.65776 315.65776 139708.57 139708.57 -937.61104 -937.61104 Loop time of 70.6349 on 1 procs for 1000 steps with 8000 atoms Performance: 1.223 ns/day, 19.621 hours/ns, 14.157 timesteps/s 59.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 69.962 | 69.962 | 69.962 | 0.0 | 99.05 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10136 | 0.10136 | 0.10136 | 0.0 | 0.14 Output | 4.3154e-05 | 4.3154e-05 | 4.3154e-05 | 0.0 | 0.00 Modify | 0.47174 | 0.47174 | 0.47174 | 0.0 | 0.67 Other | | 0.1001 | | | 0.14 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 294808 ave 294808 max 294808 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 294808 Ave neighs/atom = 36.851 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.996101840619, Press = 1.56037622482711 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.693 | 4.693 | 4.693 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -28055.053 -28055.053 -28381.428 -28381.428 315.65776 315.65776 139708.57 139708.57 -937.61104 -937.61104 23000 -28057.369 -28057.369 -28380.784 -28380.784 312.79542 312.79542 139488.66 139488.66 521.55215 521.55215 Loop time of 71.6397 on 1 procs for 1000 steps with 8000 atoms Performance: 1.206 ns/day, 19.900 hours/ns, 13.959 timesteps/s 59.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 70.738 | 70.738 | 70.738 | 0.0 | 98.74 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.099479 | 0.099479 | 0.099479 | 0.0 | 0.14 Output | 4.4107e-05 | 4.4107e-05 | 4.4107e-05 | 0.0 | 0.00 Modify | 0.6815 | 0.6815 | 0.6815 | 0.0 | 0.95 Other | | 0.1206 | | | 0.17 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 293900 ave 293900 max 293900 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 293900 Ave neighs/atom = 36.7375 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 139565.209422446 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0