# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.427092581987381*${_u_distance} variable latticeconst_converted equal 5.427092581987381*1 lattice diamond ${latticeconst_converted} lattice diamond 5.42709258198738 Lattice spacing in x,y,z = 5.4270926 5.4270926 5.4270926 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (54.270926 54.270926 54.270926) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms create_atoms CPU = 0.001 seconds variable mass_converted equal 28.0855*${_u_mass} variable mass_converted equal 28.0855*1 kim_interactions Si #=== BEGIN kim_interactions ================================== pair_style kim MEAM_LAMMPS_KangEunJun_2014_SiC__MO_477506997611_000 pair_coeff * * Si #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 28.0855 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 159845.969888008 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 159845.969888008/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 159845.969888008/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 159845.969888008/(1*1*${_u_distance}) variable V0_metal equal 159845.969888008/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 159845.969888008*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 159845.969888008 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 273.15*${_u_temperature} variable temp_converted equal 273.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 273.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 273.15 273.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "273.15 - 0.2" variable T_up equal "273.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.689 | 4.689 | 4.689 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -36757.576 -36757.576 -37040 -37040 273.15 273.15 159845.97 159845.97 1887.1862 1887.1862 1000 -36450.913 -36450.913 -36755.507 -36755.507 294.59239 294.59239 160516.04 160516.04 -337.0503 -337.0503 Loop time of 49.4256 on 1 procs for 1000 steps with 8000 atoms Performance: 1.748 ns/day, 13.729 hours/ns, 20.232 timesteps/s 55.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.699 | 48.699 | 48.699 | 0.0 | 98.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.089955 | 0.089955 | 0.089955 | 0.0 | 0.18 Output | 6.23e-05 | 6.23e-05 | 6.23e-05 | 0.0 | 0.00 Modify | 0.58208 | 0.58208 | 0.58208 | 0.0 | 1.18 Other | | 0.05397 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 368000.0 ave 368000 max 368000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 368000 Ave neighs/atom = 46.000000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -36450.913 -36450.913 -36755.507 -36755.507 294.59239 294.59239 160516.04 160516.04 -337.0503 -337.0503 2000 -36481.026 -36481.026 -36749.148 -36749.148 259.31753 259.31753 160503.89 160503.89 -264.03688 -264.03688 Loop time of 46.303 on 1 procs for 1000 steps with 8000 atoms Performance: 1.866 ns/day, 12.862 hours/ns, 21.597 timesteps/s 60.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 45.591 | 45.591 | 45.591 | 0.0 | 98.46 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.049141 | 0.049141 | 0.049141 | 0.0 | 0.11 Output | 8.14e-05 | 8.14e-05 | 8.14e-05 | 0.0 | 0.00 Modify | 0.62878 | 0.62878 | 0.62878 | 0.0 | 1.36 Other | | 0.03406 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 353538.0 ave 353538 max 353538 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 353538 Ave neighs/atom = 44.192250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -36481.026 -36481.026 -36749.148 -36749.148 259.31753 259.31753 160503.89 160503.89 -264.03688 -264.03688 3000 -36466.413 -36466.413 -36748.454 -36748.454 272.78004 272.78004 160427.92 160427.92 247.57685 247.57685 Loop time of 45.48 on 1 procs for 1000 steps with 8000 atoms Performance: 1.900 ns/day, 12.633 hours/ns, 21.988 timesteps/s 61.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.893 | 44.893 | 44.893 | 0.0 | 98.71 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.065113 | 0.065113 | 0.065113 | 0.0 | 0.14 Output | 5.01e-05 | 5.01e-05 | 5.01e-05 | 0.0 | 0.00 Modify | 0.46137 | 0.46137 | 0.46137 | 0.0 | 1.01 Other | | 0.06061 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 353598.0 ave 353598 max 353598 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 353598 Ave neighs/atom = 44.199750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -36466.413 -36466.413 -36748.454 -36748.454 272.78004 272.78004 160427.92 160427.92 247.57685 247.57685 4000 -36473.134 -36473.134 -36755.064 -36755.064 272.67276 272.67276 160509.63 160509.63 -337.36571 -337.36571 Loop time of 48.0073 on 1 procs for 1000 steps with 8000 atoms Performance: 1.800 ns/day, 13.335 hours/ns, 20.830 timesteps/s 58.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.37 | 47.37 | 47.37 | 0.0 | 98.67 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.069719 | 0.069719 | 0.069719 | 0.0 | 0.15 Output | 6.13e-05 | 6.13e-05 | 6.13e-05 | 0.0 | 0.00 Modify | 0.51324 | 0.51324 | 0.51324 | 0.0 | 1.07 Other | | 0.05451 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 353808.0 ave 353808 max 353808 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 353808 Ave neighs/atom = 44.226000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -36473.134 -36473.134 -36755.064 -36755.064 272.67276 272.67276 160509.63 160509.63 -337.36571 -337.36571 5000 -36472.808 -36472.808 -36756.473 -36756.473 274.34988 274.34988 160545.5 160545.5 -626.37035 -626.37035 Loop time of 44.6696 on 1 procs for 1000 steps with 8000 atoms Performance: 1.934 ns/day, 12.408 hours/ns, 22.387 timesteps/s 62.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.029 | 44.029 | 44.029 | 0.0 | 98.57 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.069634 | 0.069634 | 0.069634 | 0.0 | 0.16 Output | 4.7e-05 | 4.7e-05 | 4.7e-05 | 0.0 | 0.00 Modify | 0.51565 | 0.51565 | 0.51565 | 0.0 | 1.15 Other | | 0.05541 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 353902.0 ave 353902 max 353902 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 353902 Ave neighs/atom = 44.237750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.956109945552, Press = -428.19736774776 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -36472.808 -36472.808 -36756.473 -36756.473 274.34988 274.34988 160545.5 160545.5 -626.37035 -626.37035 6000 -36467.975 -36467.975 -36748.778 -36748.778 271.58252 271.58252 160333.94 160333.94 672.634 672.634 Loop time of 44.5576 on 1 procs for 1000 steps with 8000 atoms Performance: 1.939 ns/day, 12.377 hours/ns, 22.443 timesteps/s 62.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.916 | 43.916 | 43.916 | 0.0 | 98.56 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.089242 | 0.089242 | 0.089242 | 0.0 | 0.20 Output | 4.62e-05 | 4.62e-05 | 4.62e-05 | 0.0 | 0.00 Modify | 0.51754 | 0.51754 | 0.51754 | 0.0 | 1.16 Other | | 0.03427 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 353574.0 ave 353574 max 353574 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 353574 Ave neighs/atom = 44.196750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 272.749140646223, Press = -19.5565312254824 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -36467.975 -36467.975 -36748.778 -36748.778 271.58252 271.58252 160333.94 160333.94 672.634 672.634 7000 -36475.261 -36475.261 -36753.501 -36753.501 269.10395 269.10395 160492.63 160492.63 -266.24653 -266.24653 Loop time of 46.0335 on 1 procs for 1000 steps with 8000 atoms Performance: 1.877 ns/day, 12.787 hours/ns, 21.723 timesteps/s 60.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 45.329 | 45.329 | 45.329 | 0.0 | 98.47 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.089783 | 0.089783 | 0.089783 | 0.0 | 0.20 Output | 4.64e-05 | 4.64e-05 | 4.64e-05 | 0.0 | 0.00 Modify | 0.56078 | 0.56078 | 0.56078 | 0.0 | 1.22 Other | | 0.05396 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 353808.0 ave 353808 max 353808 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 353808 Ave neighs/atom = 44.226000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.095899621614, Press = -2.43712459034076 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -36475.261 -36475.261 -36753.501 -36753.501 269.10395 269.10395 160492.63 160492.63 -266.24653 -266.24653 8000 -36465.889 -36465.889 -36746.175 -36746.175 271.08277 271.08277 160521.51 160521.51 -314.64901 -314.64901 Loop time of 44.5098 on 1 procs for 1000 steps with 8000 atoms Performance: 1.941 ns/day, 12.364 hours/ns, 22.467 timesteps/s 62.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.794 | 43.794 | 43.794 | 0.0 | 98.39 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.090184 | 0.090184 | 0.090184 | 0.0 | 0.20 Output | 4.72e-05 | 4.72e-05 | 4.72e-05 | 0.0 | 0.00 Modify | 0.51182 | 0.51182 | 0.51182 | 0.0 | 1.15 Other | | 0.1138 | | | 0.26 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 353498.0 ave 353498 max 353498 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 353498 Ave neighs/atom = 44.187250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.084686104462, Press = -5.64360767150676 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -36465.889 -36465.889 -36746.175 -36746.175 271.08277 271.08277 160521.51 160521.51 -314.64901 -314.64901 9000 -36474.261 -36474.261 -36763.603 -36763.603 279.84111 279.84111 160408.43 160408.43 359.97254 359.97254 Loop time of 47.8284 on 1 procs for 1000 steps with 8000 atoms Performance: 1.806 ns/day, 13.286 hours/ns, 20.908 timesteps/s 58.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.175 | 47.175 | 47.175 | 0.0 | 98.63 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.09001 | 0.09001 | 0.09001 | 0.0 | 0.19 Output | 3.72e-05 | 3.72e-05 | 3.72e-05 | 0.0 | 0.00 Modify | 0.48919 | 0.48919 | 0.48919 | 0.0 | 1.02 Other | | 0.07403 | | | 0.15 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 353382.0 ave 353382 max 353382 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 353382 Ave neighs/atom = 44.172750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.05900611718, Press = -5.51271740984517 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -36474.261 -36474.261 -36763.603 -36763.603 279.84111 279.84111 160408.43 160408.43 359.97254 359.97254 10000 -36469.104 -36469.104 -36755.368 -36755.368 276.86466 276.86466 160402.68 160402.68 425.51772 425.51772 Loop time of 49.871 on 1 procs for 1000 steps with 8000 atoms Performance: 1.732 ns/day, 13.853 hours/ns, 20.052 timesteps/s 56.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 49.186 | 49.186 | 49.186 | 0.0 | 98.63 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.089957 | 0.089957 | 0.089957 | 0.0 | 0.18 Output | 4.64e-05 | 4.64e-05 | 4.64e-05 | 0.0 | 0.00 Modify | 0.55021 | 0.55021 | 0.55021 | 0.0 | 1.10 Other | | 0.04438 | | | 0.09 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 354792.0 ave 354792 max 354792 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 354792 Ave neighs/atom = 44.349000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.16815743347, Press = 1.26488230417319 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -36469.104 -36469.104 -36755.368 -36755.368 276.86466 276.86466 160402.68 160402.68 425.51772 425.51772 11000 -36470.02 -36470.02 -36759.176 -36759.176 279.66117 279.66117 160583.38 160583.38 -625.70496 -625.70496 Loop time of 46.338 on 1 procs for 1000 steps with 8000 atoms Performance: 1.865 ns/day, 12.872 hours/ns, 21.581 timesteps/s 59.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 45.576 | 45.576 | 45.576 | 0.0 | 98.36 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.099475 | 0.099475 | 0.099475 | 0.0 | 0.21 Output | 4.72e-05 | 4.72e-05 | 4.72e-05 | 0.0 | 0.00 Modify | 0.58844 | 0.58844 | 0.58844 | 0.0 | 1.27 Other | | 0.07426 | | | 0.16 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 354272.0 ave 354272 max 354272 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 354272 Ave neighs/atom = 44.284000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.203575622385, Press = -1.62999163324535 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -36470.02 -36470.02 -36759.176 -36759.176 279.66117 279.66117 160583.38 160583.38 -625.70496 -625.70496 12000 -36469.572 -36469.572 -36760.808 -36760.808 281.67226 281.67226 160492.91 160492.91 -81.364303 -81.364303 Loop time of 46.9909 on 1 procs for 1000 steps with 8000 atoms Performance: 1.839 ns/day, 13.053 hours/ns, 21.281 timesteps/s 59.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.418 | 46.418 | 46.418 | 0.0 | 98.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.049978 | 0.049978 | 0.049978 | 0.0 | 0.11 Output | 3.78e-05 | 3.78e-05 | 3.78e-05 | 0.0 | 0.00 Modify | 0.48891 | 0.48891 | 0.48891 | 0.0 | 1.04 Other | | 0.03366 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 353960.0 ave 353960 max 353960 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 353960 Ave neighs/atom = 44.245000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.416103735053, Press = -3.40485289425735 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -36469.572 -36469.572 -36760.808 -36760.808 281.67226 281.67226 160492.91 160492.91 -81.364303 -81.364303 13000 -36473.073 -36473.073 -36758.405 -36758.405 275.96275 275.96275 160439.4 160439.4 210.38062 210.38062 Loop time of 46.86 on 1 procs for 1000 steps with 8000 atoms Performance: 1.844 ns/day, 13.017 hours/ns, 21.340 timesteps/s 59.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.266 | 46.266 | 46.266 | 0.0 | 98.73 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.06951 | 0.06951 | 0.06951 | 0.0 | 0.15 Output | 5.14e-05 | 5.14e-05 | 5.14e-05 | 0.0 | 0.00 Modify | 0.47053 | 0.47053 | 0.47053 | 0.0 | 1.00 Other | | 0.05406 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 354252.0 ave 354252 max 354252 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 354252 Ave neighs/atom = 44.281500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.359287489256, Press = -2.31648900822926 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -36473.073 -36473.073 -36758.405 -36758.405 275.96275 275.96275 160439.4 160439.4 210.38062 210.38062 14000 -36473.225 -36473.225 -36759.128 -36759.128 276.51474 276.51474 160417.1 160417.1 287.9515 287.9515 Loop time of 47.8115 on 1 procs for 1000 steps with 8000 atoms Performance: 1.807 ns/day, 13.281 hours/ns, 20.915 timesteps/s 58.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.032 | 47.032 | 47.032 | 0.0 | 98.37 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.049542 | 0.049542 | 0.049542 | 0.0 | 0.10 Output | 4.72e-05 | 4.72e-05 | 4.72e-05 | 0.0 | 0.00 Modify | 0.67559 | 0.67559 | 0.67559 | 0.0 | 1.41 Other | | 0.05402 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 354182.0 ave 354182 max 354182 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 354182 Ave neighs/atom = 44.272750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.294818410917, Press = -1.70492078982145 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -36473.225 -36473.225 -36759.128 -36759.128 276.51474 276.51474 160417.1 160417.1 287.9515 287.9515 15000 -36465.71 -36465.71 -36753.375 -36753.375 278.21892 278.21892 160457.77 160457.77 43.868374 43.868374 Loop time of 46.2696 on 1 procs for 1000 steps with 8000 atoms Performance: 1.867 ns/day, 12.853 hours/ns, 21.612 timesteps/s 60.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 45.689 | 45.689 | 45.689 | 0.0 | 98.74 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.049051 | 0.049051 | 0.049051 | 0.0 | 0.11 Output | 5.95e-05 | 5.95e-05 | 5.95e-05 | 0.0 | 0.00 Modify | 0.458 | 0.458 | 0.458 | 0.0 | 0.99 Other | | 0.07381 | | | 0.16 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 354320.0 ave 354320 max 354320 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 354320 Ave neighs/atom = 44.290000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.271561962457, Press = 0.311575274125317 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -36465.71 -36465.71 -36753.375 -36753.375 278.21892 278.21892 160457.77 160457.77 43.868374 43.868374 16000 -36468.047 -36468.047 -36749.591 -36749.591 272.29869 272.29869 160646.18 160646.18 -1122.2137 -1122.2137 Loop time of 44.7957 on 1 procs for 1000 steps with 8000 atoms Performance: 1.929 ns/day, 12.443 hours/ns, 22.324 timesteps/s 62.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.114 | 44.114 | 44.114 | 0.0 | 98.48 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.093506 | 0.093506 | 0.093506 | 0.0 | 0.21 Output | 4.63e-05 | 4.63e-05 | 4.63e-05 | 0.0 | 0.00 Modify | 0.51385 | 0.51385 | 0.51385 | 0.0 | 1.15 Other | | 0.07395 | | | 0.17 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 353800.0 ave 353800 max 353800 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 353800 Ave neighs/atom = 44.225000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.266389222268, Press = -0.477523747021877 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -36468.047 -36468.047 -36749.591 -36749.591 272.29869 272.29869 160646.18 160646.18 -1122.2137 -1122.2137 17000 -36465.079 -36465.079 -36750.417 -36750.417 275.96786 275.96786 160497.82 160497.82 -167.49452 -167.49452 Loop time of 46.9009 on 1 procs for 1000 steps with 8000 atoms Performance: 1.842 ns/day, 13.028 hours/ns, 21.322 timesteps/s 59.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.27 | 46.27 | 46.27 | 0.0 | 98.66 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.054252 | 0.054252 | 0.054252 | 0.0 | 0.12 Output | 4.57e-05 | 4.57e-05 | 4.57e-05 | 0.0 | 0.00 Modify | 0.54242 | 0.54242 | 0.54242 | 0.0 | 1.16 Other | | 0.03385 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 353102.0 ave 353102 max 353102 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 353102 Ave neighs/atom = 44.137750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.273757157286, Press = -2.68437098298496 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -36465.079 -36465.079 -36750.417 -36750.417 275.96786 275.96786 160497.82 160497.82 -167.49452 -167.49452 18000 -36473.746 -36473.746 -36752.701 -36752.701 269.79492 269.79492 160359.87 160359.87 563.96617 563.96617 Loop time of 45.8494 on 1 procs for 1000 steps with 8000 atoms Performance: 1.884 ns/day, 12.736 hours/ns, 21.811 timesteps/s 60.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 45.118 | 45.118 | 45.118 | 0.0 | 98.41 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14963 | 0.14963 | 0.14963 | 0.0 | 0.33 Output | 5.26e-05 | 5.26e-05 | 5.26e-05 | 0.0 | 0.00 Modify | 0.52091 | 0.52091 | 0.52091 | 0.0 | 1.14 Other | | 0.06028 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 353458.0 ave 353458 max 353458 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 353458 Ave neighs/atom = 44.182250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.333043243845, Press = -0.902548647339072 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -36473.746 -36473.746 -36752.701 -36752.701 269.79492 269.79492 160359.87 160359.87 563.96617 563.96617 19000 -36469.563 -36469.563 -36754.015 -36754.015 275.11185 275.11185 160489.35 160489.35 -148.99475 -148.99475 Loop time of 48.8597 on 1 procs for 1000 steps with 8000 atoms Performance: 1.768 ns/day, 13.572 hours/ns, 20.467 timesteps/s 57.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.081 | 48.081 | 48.081 | 0.0 | 98.41 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11173 | 0.11173 | 0.11173 | 0.0 | 0.23 Output | 3.76e-05 | 3.76e-05 | 3.76e-05 | 0.0 | 0.00 Modify | 0.58945 | 0.58945 | 0.58945 | 0.0 | 1.21 Other | | 0.07747 | | | 0.16 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 354108.0 ave 354108 max 354108 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 354108 Ave neighs/atom = 44.263500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.351584073632, Press = 0.447141014910133 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -36469.563 -36469.563 -36754.015 -36754.015 275.11185 275.11185 160489.35 160489.35 -148.99475 -148.99475 20000 -36477.961 -36477.961 -36757.368 -36757.368 270.23212 270.23212 160543.05 160543.05 -529.76206 -529.76206 Loop time of 45.3594 on 1 procs for 1000 steps with 8000 atoms Performance: 1.905 ns/day, 12.600 hours/ns, 22.046 timesteps/s 61.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.715 | 44.715 | 44.715 | 0.0 | 98.58 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.04979 | 0.04979 | 0.04979 | 0.0 | 0.11 Output | 7.01e-05 | 7.01e-05 | 7.01e-05 | 0.0 | 0.00 Modify | 0.54022 | 0.54022 | 0.54022 | 0.0 | 1.19 Other | | 0.05417 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 353856.0 ave 353856 max 353856 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 353856 Ave neighs/atom = 44.232000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.263308860546, Press = -1.44261915425293 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -36477.961 -36477.961 -36757.368 -36757.368 270.23212 270.23212 160543.05 160543.05 -529.76206 -529.76206 21000 -36472.435 -36472.435 -36752.466 -36752.466 270.8349 270.8349 160416.79 160416.79 264.80752 264.80752 Loop time of 45.9925 on 1 procs for 1000 steps with 8000 atoms Performance: 1.879 ns/day, 12.776 hours/ns, 21.743 timesteps/s 61.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 45.446 | 45.446 | 45.446 | 0.0 | 98.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.065002 | 0.065002 | 0.065002 | 0.0 | 0.14 Output | 7.42e-05 | 7.42e-05 | 7.42e-05 | 0.0 | 0.00 Modify | 0.44664 | 0.44664 | 0.44664 | 0.0 | 0.97 Other | | 0.03448 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 353864.0 ave 353864 max 353864 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 353864 Ave neighs/atom = 44.233000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.253968235431, Press = -1.24130410063565 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -36472.435 -36472.435 -36752.466 -36752.466 270.8349 270.8349 160416.79 160416.79 264.80752 264.80752 22000 -36471.165 -36471.165 -36757.14 -36757.14 276.58389 276.58389 160439.34 160439.34 190.98965 190.98965 Loop time of 50.1041 on 1 procs for 1000 steps with 8000 atoms Performance: 1.724 ns/day, 13.918 hours/ns, 19.958 timesteps/s 55.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 49.48 | 49.48 | 49.48 | 0.0 | 98.76 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.069856 | 0.069856 | 0.069856 | 0.0 | 0.14 Output | 4.75e-05 | 4.75e-05 | 4.75e-05 | 0.0 | 0.00 Modify | 0.45942 | 0.45942 | 0.45942 | 0.0 | 0.92 Other | | 0.0943 | | | 0.19 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 353864.0 ave 353864 max 353864 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 353864 Ave neighs/atom = 44.233000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.238736350789, Press = -0.426050423459854 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -36471.165 -36471.165 -36757.14 -36757.14 276.58389 276.58389 160439.34 160439.34 190.98965 190.98965 23000 -36472.539 -36472.539 -36754.221 -36754.221 272.43228 272.43228 160495.94 160495.94 -225.48954 -225.48954 Loop time of 45.0177 on 1 procs for 1000 steps with 8000 atoms Performance: 1.919 ns/day, 12.505 hours/ns, 22.213 timesteps/s 62.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.332 | 44.332 | 44.332 | 0.0 | 98.48 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12983 | 0.12983 | 0.12983 | 0.0 | 0.29 Output | 4.77e-05 | 4.77e-05 | 4.77e-05 | 0.0 | 0.00 Modify | 0.52214 | 0.52214 | 0.52214 | 0.0 | 1.16 Other | | 0.03397 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 354042.0 ave 354042 max 354042 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 354042 Ave neighs/atom = 44.255250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.240922243318, Press = -0.715017806328898 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -36472.539 -36472.539 -36754.221 -36754.221 272.43228 272.43228 160495.94 160495.94 -225.48954 -225.48954 24000 -36471.602 -36471.602 -36757.796 -36757.796 276.79568 276.79568 160433.36 160433.36 193.39896 193.39896 Loop time of 44.5708 on 1 procs for 1000 steps with 8000 atoms Performance: 1.938 ns/day, 12.381 hours/ns, 22.436 timesteps/s 62.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.018 | 44.018 | 44.018 | 0.0 | 98.76 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.04904 | 0.04904 | 0.04904 | 0.0 | 0.11 Output | 3.86e-05 | 3.86e-05 | 3.86e-05 | 0.0 | 0.00 Modify | 0.44965 | 0.44965 | 0.44965 | 0.0 | 1.01 Other | | 0.05408 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 353844.0 ave 353844 max 353844 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 353844 Ave neighs/atom = 44.230500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.180616355432, Press = -0.784813953626431 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -36471.602 -36471.602 -36757.796 -36757.796 276.79568 276.79568 160433.36 160433.36 193.39896 193.39896 25000 -36466.181 -36466.181 -36752.385 -36752.385 276.80594 276.80594 160512.81 160512.81 -249.75439 -249.75439 Loop time of 41.7833 on 1 procs for 1000 steps with 8000 atoms Performance: 2.068 ns/day, 11.606 hours/ns, 23.933 timesteps/s 66.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 41.22 | 41.22 | 41.22 | 0.0 | 98.65 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.089824 | 0.089824 | 0.089824 | 0.0 | 0.21 Output | 4.48e-05 | 4.48e-05 | 4.48e-05 | 0.0 | 0.00 Modify | 0.3996 | 0.3996 | 0.3996 | 0.0 | 0.96 Other | | 0.07391 | | | 0.18 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 354258.0 ave 354258 max 354258 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 354258 Ave neighs/atom = 44.282250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.196808543246, Press = -0.851206057482238 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -36466.181 -36466.181 -36752.385 -36752.385 276.80594 276.80594 160512.81 160512.81 -249.75439 -249.75439 26000 -36473.084 -36473.084 -36754.281 -36754.281 271.9631 271.9631 160489.52 160489.52 -228.2682 -228.2682 Loop time of 42.946 on 1 procs for 1000 steps with 8000 atoms Performance: 2.012 ns/day, 11.929 hours/ns, 23.285 timesteps/s 65.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.348 | 42.348 | 42.348 | 0.0 | 98.61 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.089557 | 0.089557 | 0.089557 | 0.0 | 0.21 Output | 4.58e-05 | 4.58e-05 | 4.58e-05 | 0.0 | 0.00 Modify | 0.45433 | 0.45433 | 0.45433 | 0.0 | 1.06 Other | | 0.05441 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 353720.0 ave 353720 max 353720 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 353720 Ave neighs/atom = 44.215000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.226046182443, Press = -1.60223829994113 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 26000 -36473.084 -36473.084 -36754.281 -36754.281 271.9631 271.9631 160489.52 160489.52 -228.2682 -228.2682 27000 -36464.357 -36464.357 -36745.157 -36745.157 271.57879 271.57879 160321.64 160321.64 854.05316 854.05316 Loop time of 45.4068 on 1 procs for 1000 steps with 8000 atoms Performance: 1.903 ns/day, 12.613 hours/ns, 22.023 timesteps/s 61.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.623 | 44.623 | 44.623 | 0.0 | 98.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11965 | 0.11965 | 0.11965 | 0.0 | 0.26 Output | 4.73e-05 | 4.73e-05 | 4.73e-05 | 0.0 | 0.00 Modify | 0.56016 | 0.56016 | 0.56016 | 0.0 | 1.23 Other | | 0.1042 | | | 0.23 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 353600.0 ave 353600 max 353600 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 353600 Ave neighs/atom = 44.200000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 273.276006236344, Press = -0.653024600469886 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 27000 -36464.357 -36464.357 -36745.157 -36745.157 271.57879 271.57879 160321.64 160321.64 854.05316 854.05316 28000 -36473.17 -36473.17 -36754.478 -36754.478 272.07047 272.07047 160452.57 160452.57 -24.025847 -24.025847 Loop time of 40.9044 on 1 procs for 1000 steps with 8000 atoms Performance: 2.112 ns/day, 11.362 hours/ns, 24.447 timesteps/s 68.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 40.267 | 40.267 | 40.267 | 0.0 | 98.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.084592 | 0.084592 | 0.084592 | 0.0 | 0.21 Output | 3.82e-05 | 3.82e-05 | 3.82e-05 | 0.0 | 0.00 Modify | 0.49938 | 0.49938 | 0.49938 | 0.0 | 1.22 Other | | 0.05384 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 353824.0 ave 353824 max 353824 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 353824 Ave neighs/atom = 44.228000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T273.15.out" else "print 'not_converged' file output/vol_T273.15.out" print '${V}' file output/vol_T273.15.out 160459.335128333 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0