# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.427092581987381*${_u_distance} variable latticeconst_converted equal 5.427092581987381*1 lattice diamond ${latticeconst_converted} lattice diamond 5.42709258198738 Lattice spacing in x,y,z = 5.4270926 5.4270926 5.4270926 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (54.270926 54.270926 54.270926) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms create_atoms CPU = 0.001 seconds variable mass_converted equal 28.0855*${_u_mass} variable mass_converted equal 28.0855*1 kim_interactions Si #=== BEGIN kim_interactions ================================== pair_style kim MEAM_LAMMPS_KangEunJun_2014_SiC__MO_477506997611_000 pair_coeff * * Si #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 28.0855 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 159845.969888008 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 159845.969888008/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 159845.969888008/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 159845.969888008/(1*1*${_u_distance}) variable V0_metal equal 159845.969888008/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 159845.969888008*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 159845.969888008 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.689 | 4.689 | 4.689 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -36716.218 -36716.218 -37040 -37040 313.15 313.15 159845.97 159845.97 2163.5478 2163.5478 1000 -36363.968 -36363.968 -36705.746 -36705.746 330.55487 330.55487 160508.26 160508.26 345.33721 345.33721 Loop time of 47.8078 on 1 procs for 1000 steps with 8000 atoms Performance: 1.807 ns/day, 13.280 hours/ns, 20.917 timesteps/s 57.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.097 | 47.097 | 47.097 | 0.0 | 98.51 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.051358 | 0.051358 | 0.051358 | 0.0 | 0.11 Output | 6.26e-05 | 6.26e-05 | 6.26e-05 | 0.0 | 0.00 Modify | 0.62616 | 0.62616 | 0.62616 | 0.0 | 1.31 Other | | 0.03359 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 368000.0 ave 368000 max 368000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 368000 Ave neighs/atom = 46.000000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -36363.968 -36363.968 -36705.746 -36705.746 330.55487 330.55487 160508.26 160508.26 345.33721 345.33721 2000 -36398.673 -36398.673 -36708.008 -36708.008 299.17662 299.17662 160562.44 160562.44 -68.343673 -68.343673 Loop time of 49.6486 on 1 procs for 1000 steps with 8000 atoms Performance: 1.740 ns/day, 13.791 hours/ns, 20.142 timesteps/s 55.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.947 | 48.947 | 48.947 | 0.0 | 98.59 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.089639 | 0.089639 | 0.089639 | 0.0 | 0.18 Output | 4.92e-05 | 4.92e-05 | 4.92e-05 | 0.0 | 0.00 Modify | 0.55901 | 0.55901 | 0.55901 | 0.0 | 1.13 Other | | 0.05334 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351936.0 ave 351936 max 351936 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351936 Ave neighs/atom = 43.992000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -36398.673 -36398.673 -36708.008 -36708.008 299.17662 299.17662 160562.44 160562.44 -68.343673 -68.343673 3000 -36381.394 -36381.394 -36711.776 -36711.776 319.53324 319.53324 160616.17 160616.17 -326.65407 -326.65407 Loop time of 48.8617 on 1 procs for 1000 steps with 8000 atoms Performance: 1.768 ns/day, 13.573 hours/ns, 20.466 timesteps/s 56.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.27 | 48.27 | 48.27 | 0.0 | 98.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.090167 | 0.090167 | 0.090167 | 0.0 | 0.18 Output | 4.97e-05 | 4.97e-05 | 4.97e-05 | 0.0 | 0.00 Modify | 0.4473 | 0.4473 | 0.4473 | 0.0 | 0.92 Other | | 0.05374 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351640.0 ave 351640 max 351640 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351640 Ave neighs/atom = 43.955000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -36381.394 -36381.394 -36711.776 -36711.776 319.53324 319.53324 160616.17 160616.17 -326.65407 -326.65407 4000 -36389.84 -36389.84 -36711.367 -36711.367 310.96918 310.96918 160585.71 160585.71 -190.13409 -190.13409 Loop time of 43.6796 on 1 procs for 1000 steps with 8000 atoms Performance: 1.978 ns/day, 12.133 hours/ns, 22.894 timesteps/s 64.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.065 | 43.065 | 43.065 | 0.0 | 98.59 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11015 | 0.11015 | 0.11015 | 0.0 | 0.25 Output | 7.64e-05 | 7.64e-05 | 7.64e-05 | 0.0 | 0.00 Modify | 0.45099 | 0.45099 | 0.45099 | 0.0 | 1.03 Other | | 0.05337 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351686.0 ave 351686 max 351686 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351686 Ave neighs/atom = 43.960750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -36389.84 -36389.84 -36711.367 -36711.367 310.96918 310.96918 160585.71 160585.71 -190.13409 -190.13409 5000 -36388.815 -36388.815 -36711.129 -36711.129 311.73059 311.73059 160434.73 160434.73 659.27606 659.27606 Loop time of 51.3425 on 1 procs for 1000 steps with 8000 atoms Performance: 1.683 ns/day, 14.262 hours/ns, 19.477 timesteps/s 54.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 50.724 | 50.724 | 50.724 | 0.0 | 98.80 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.072455 | 0.072455 | 0.072455 | 0.0 | 0.14 Output | 4.72e-05 | 4.72e-05 | 4.72e-05 | 0.0 | 0.00 Modify | 0.49253 | 0.49253 | 0.49253 | 0.0 | 0.96 Other | | 0.05337 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351884.0 ave 351884 max 351884 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351884 Ave neighs/atom = 43.985500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 314.348451560449, Press = 484.368192222703 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -36388.815 -36388.815 -36711.129 -36711.129 311.73059 311.73059 160434.73 160434.73 659.27606 659.27606 6000 -36384.001 -36384.001 -36702.96 -36702.96 308.48529 308.48529 160468.77 160468.77 418.12839 418.12839 Loop time of 45.6067 on 1 procs for 1000 steps with 8000 atoms Performance: 1.894 ns/day, 12.669 hours/ns, 21.927 timesteps/s 61.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.863 | 44.863 | 44.863 | 0.0 | 98.37 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.069984 | 0.069984 | 0.069984 | 0.0 | 0.15 Output | 4.6e-05 | 4.6e-05 | 4.6e-05 | 0.0 | 0.00 Modify | 0.60971 | 0.60971 | 0.60971 | 0.0 | 1.34 Other | | 0.06361 | | | 0.14 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 352346.0 ave 352346 max 352346 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 352346 Ave neighs/atom = 44.043250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.731776185361, Press = 15.85353186004 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -36384.001 -36384.001 -36702.96 -36702.96 308.48529 308.48529 160468.77 160468.77 418.12839 418.12839 7000 -36391.77 -36391.77 -36709.442 -36709.442 307.24089 307.24089 160552.32 160552.32 -132.8322 -132.8322 Loop time of 44.0638 on 1 procs for 1000 steps with 8000 atoms Performance: 1.961 ns/day, 12.240 hours/ns, 22.694 timesteps/s 63.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.399 | 43.399 | 43.399 | 0.0 | 98.49 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.090229 | 0.090229 | 0.090229 | 0.0 | 0.20 Output | 4.72e-05 | 4.72e-05 | 4.72e-05 | 0.0 | 0.00 Modify | 0.52004 | 0.52004 | 0.52004 | 0.0 | 1.18 Other | | 0.05412 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351484.0 ave 351484 max 351484 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351484 Ave neighs/atom = 43.935500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.115378424627, Press = 9.04083913264098 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -36391.77 -36391.77 -36709.442 -36709.442 307.24089 307.24089 160552.32 160552.32 -132.8322 -132.8322 8000 -36381.221 -36381.221 -36709.787 -36709.787 317.77739 317.77739 160552.37 160552.37 4.0289297 4.0289297 Loop time of 43.6262 on 1 procs for 1000 steps with 8000 atoms Performance: 1.980 ns/day, 12.118 hours/ns, 22.922 timesteps/s 64.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.055 | 43.055 | 43.055 | 0.0 | 98.69 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.049658 | 0.049658 | 0.049658 | 0.0 | 0.11 Output | 4.5e-05 | 4.5e-05 | 4.5e-05 | 0.0 | 0.00 Modify | 0.46825 | 0.46825 | 0.46825 | 0.0 | 1.07 Other | | 0.05326 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351656.0 ave 351656 max 351656 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351656 Ave neighs/atom = 43.957000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.09070169957, Press = 6.36120977935015 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -36381.221 -36381.221 -36709.787 -36709.787 317.77739 317.77739 160552.37 160552.37 4.0289297 4.0289297 9000 -36391.455 -36391.455 -36715.108 -36715.108 313.02502 313.02502 160490.73 160490.73 390.37093 390.37093 Loop time of 45.6266 on 1 procs for 1000 steps with 8000 atoms Performance: 1.894 ns/day, 12.674 hours/ns, 21.917 timesteps/s 61.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 44.878 | 44.878 | 44.878 | 0.0 | 98.36 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13042 | 0.13042 | 0.13042 | 0.0 | 0.29 Output | 4.64e-05 | 4.64e-05 | 4.64e-05 | 0.0 | 0.00 Modify | 0.56452 | 0.56452 | 0.56452 | 0.0 | 1.24 Other | | 0.0535 | | | 0.12 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351766.0 ave 351766 max 351766 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351766 Ave neighs/atom = 43.970750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.042671567785, Press = 3.8199608157259 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -36391.455 -36391.455 -36715.108 -36715.108 313.02502 313.02502 160490.73 160490.73 390.37093 390.37093 10000 -36384.246 -36384.246 -36715.076 -36715.076 319.96632 319.96632 160498.1 160498.1 428.6922 428.6922 Loop time of 52.4497 on 1 procs for 1000 steps with 8000 atoms Performance: 1.647 ns/day, 14.569 hours/ns, 19.066 timesteps/s 53.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 51.804 | 51.804 | 51.804 | 0.0 | 98.77 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.049864 | 0.049864 | 0.049864 | 0.0 | 0.10 Output | 4.68e-05 | 4.68e-05 | 4.68e-05 | 0.0 | 0.00 Modify | 0.55286 | 0.55286 | 0.55286 | 0.0 | 1.05 Other | | 0.04337 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351962.0 ave 351962 max 351962 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351962 Ave neighs/atom = 43.995250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.16385374708, Press = 1.68013772689048 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -36384.246 -36384.246 -36715.076 -36715.076 319.96632 319.96632 160498.1 160498.1 428.6922 428.6922 11000 -36386.553 -36386.553 -36711.913 -36711.913 314.67617 314.67617 160620.67 160620.67 -399.73018 -399.73018 Loop time of 51.997 on 1 procs for 1000 steps with 8000 atoms Performance: 1.662 ns/day, 14.444 hours/ns, 19.232 timesteps/s 53.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 51.275 | 51.275 | 51.275 | 0.0 | 98.61 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.090107 | 0.090107 | 0.090107 | 0.0 | 0.17 Output | 4.7e-05 | 4.7e-05 | 4.7e-05 | 0.0 | 0.00 Modify | 0.59831 | 0.59831 | 0.59831 | 0.0 | 1.15 Other | | 0.03363 | | | 0.06 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 352274.0 ave 352274 max 352274 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 352274 Ave neighs/atom = 44.034250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.205207903385, Press = -0.405395929072972 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -36386.553 -36386.553 -36711.913 -36711.913 314.67617 314.67617 160620.67 160620.67 -399.73018 -399.73018 12000 -36384.284 -36384.284 -36714.672 -36714.672 319.53916 319.53916 160690.41 160690.41 -646.74828 -646.74828 Loop time of 46.886 on 1 procs for 1000 steps with 8000 atoms Performance: 1.843 ns/day, 13.024 hours/ns, 21.328 timesteps/s 59.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.192 | 46.192 | 46.192 | 0.0 | 98.52 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.090107 | 0.090107 | 0.090107 | 0.0 | 0.19 Output | 5.34e-05 | 5.34e-05 | 5.34e-05 | 0.0 | 0.00 Modify | 0.53001 | 0.53001 | 0.53001 | 0.0 | 1.13 Other | | 0.074 | | | 0.16 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351636.0 ave 351636 max 351636 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351636 Ave neighs/atom = 43.954500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.456917459053, Press = 2.55951767844044 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -36384.284 -36384.284 -36714.672 -36714.672 319.53916 319.53916 160690.41 160690.41 -646.74828 -646.74828 13000 -36386.256 -36386.256 -36715 -36715 317.94866 317.94866 160594.96 160594.96 -191.55669 -191.55669 Loop time of 44.264 on 1 procs for 1000 steps with 8000 atoms Performance: 1.952 ns/day, 12.296 hours/ns, 22.592 timesteps/s 63.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.665 | 43.665 | 43.665 | 0.0 | 98.65 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.080053 | 0.080053 | 0.080053 | 0.0 | 0.18 Output | 4.64e-05 | 4.64e-05 | 4.64e-05 | 0.0 | 0.00 Modify | 0.44563 | 0.44563 | 0.44563 | 0.0 | 1.01 Other | | 0.07296 | | | 0.16 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351932.0 ave 351932 max 351932 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351932 Ave neighs/atom = 43.991500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.395027951776, Press = 5.39875174298296 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -36386.256 -36386.256 -36715 -36715 317.94866 317.94866 160594.96 160594.96 -191.55669 -191.55669 14000 -36391.158 -36391.158 -36715.837 -36715.837 314.01737 314.01737 160483.19 160483.19 459.26958 459.26958 Loop time of 43.0165 on 1 procs for 1000 steps with 8000 atoms Performance: 2.009 ns/day, 11.949 hours/ns, 23.247 timesteps/s 64.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 42.423 | 42.423 | 42.423 | 0.0 | 98.62 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.05005 | 0.05005 | 0.05005 | 0.0 | 0.12 Output | 6.53e-05 | 6.53e-05 | 6.53e-05 | 0.0 | 0.00 Modify | 0.50975 | 0.50975 | 0.50975 | 0.0 | 1.19 Other | | 0.03354 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 352020.0 ave 352020 max 352020 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 352020 Ave neighs/atom = 44.002500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.316142942052, Press = 2.80626296720224 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -36391.158 -36391.158 -36715.837 -36715.837 314.01737 314.01737 160483.19 160483.19 459.26958 459.26958 15000 -36381.396 -36381.396 -36708.948 -36708.948 316.79601 316.79601 160495.03 160495.03 412.80017 412.80017 Loop time of 49.0248 on 1 procs for 1000 steps with 8000 atoms Performance: 1.762 ns/day, 13.618 hours/ns, 20.398 timesteps/s 57.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 48.284 | 48.284 | 48.284 | 0.0 | 98.49 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070478 | 0.070478 | 0.070478 | 0.0 | 0.14 Output | 4.72e-05 | 4.72e-05 | 4.72e-05 | 0.0 | 0.00 Modify | 0.63679 | 0.63679 | 0.63679 | 0.0 | 1.30 Other | | 0.03334 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 352246.0 ave 352246 max 352246 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 352246 Ave neighs/atom = 44.030750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.366108277163, Press = 1.615149967067 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -36381.396 -36381.396 -36708.948 -36708.948 316.79601 316.79601 160495.03 160495.03 412.80017 412.80017 16000 -36389.55 -36389.55 -36710.01 -36710.01 309.93794 309.93794 160518.74 160518.74 116.89185 116.89185 Loop time of 47.8916 on 1 procs for 1000 steps with 8000 atoms Performance: 1.804 ns/day, 13.303 hours/ns, 20.880 timesteps/s 58.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.185 | 47.185 | 47.185 | 0.0 | 98.52 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070116 | 0.070116 | 0.070116 | 0.0 | 0.15 Output | 4.63e-05 | 4.63e-05 | 4.63e-05 | 0.0 | 0.00 Modify | 0.60339 | 0.60339 | 0.60339 | 0.0 | 1.26 Other | | 0.03321 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351980.0 ave 351980 max 351980 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351980 Ave neighs/atom = 43.997500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.347152129125, Press = 0.824265879871413 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -36389.55 -36389.55 -36710.01 -36710.01 309.93794 309.93794 160518.74 160518.74 116.89185 116.89185 17000 -36382.705 -36382.705 -36705.409 -36705.409 312.10723 312.10723 160597.43 160597.43 -229.68495 -229.68495 Loop time of 47.3685 on 1 procs for 1000 steps with 8000 atoms Performance: 1.824 ns/day, 13.158 hours/ns, 21.111 timesteps/s 58.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.695 | 46.695 | 46.695 | 0.0 | 98.58 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.090288 | 0.090288 | 0.090288 | 0.0 | 0.19 Output | 4.75e-05 | 4.75e-05 | 4.75e-05 | 0.0 | 0.00 Modify | 0.54983 | 0.54983 | 0.54983 | 0.0 | 1.16 Other | | 0.03322 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351898.0 ave 351898 max 351898 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351898 Ave neighs/atom = 43.987250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.333048152686, Press = 0.23646238282489 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -36382.705 -36382.705 -36705.409 -36705.409 312.10723 312.10723 160597.43 160597.43 -229.68495 -229.68495 18000 -36387.423 -36387.423 -36707.901 -36707.901 309.95439 309.95439 160760.36 160760.36 -1231.5198 -1231.5198 Loop time of 47.8669 on 1 procs for 1000 steps with 8000 atoms Performance: 1.805 ns/day, 13.296 hours/ns, 20.891 timesteps/s 58.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 47.179 | 47.179 | 47.179 | 0.0 | 98.56 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070456 | 0.070456 | 0.070456 | 0.0 | 0.15 Output | 3.99e-05 | 3.99e-05 | 3.99e-05 | 0.0 | 0.00 Modify | 0.52387 | 0.52387 | 0.52387 | 0.0 | 1.09 Other | | 0.09354 | | | 0.20 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351274.0 ave 351274 max 351274 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351274 Ave neighs/atom = 43.909250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.268771087985, Press = 0.448540454553876 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -36387.423 -36387.423 -36707.901 -36707.901 309.95439 309.95439 160760.36 160760.36 -1231.5198 -1231.5198 19000 -36388.518 -36388.518 -36712.865 -36712.865 313.69635 313.69635 160635.66 160635.66 -491.29251 -491.29251 Loop time of 46.7104 on 1 procs for 1000 steps with 8000 atoms Performance: 1.850 ns/day, 12.975 hours/ns, 21.409 timesteps/s 59.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.087 | 46.087 | 46.087 | 0.0 | 98.67 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.050407 | 0.050407 | 0.050407 | 0.0 | 0.11 Output | 4.62e-05 | 4.62e-05 | 4.62e-05 | 0.0 | 0.00 Modify | 0.51941 | 0.51941 | 0.51941 | 0.0 | 1.11 Other | | 0.05331 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 350958.0 ave 350958 max 350958 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 350958 Ave neighs/atom = 43.869750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.219370017957, Press = 2.8744387380806 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -36388.518 -36388.518 -36712.865 -36712.865 313.69635 313.69635 160635.66 160635.66 -491.29251 -491.29251 20000 -36386.874 -36386.874 -36707.692 -36707.692 310.28332 310.28332 160489.64 160489.64 395.95871 395.95871 Loop time of 46.8607 on 1 procs for 1000 steps with 8000 atoms Performance: 1.844 ns/day, 13.017 hours/ns, 21.340 timesteps/s 59.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.148 | 46.148 | 46.148 | 0.0 | 98.48 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.080054 | 0.080054 | 0.080054 | 0.0 | 0.17 Output | 4.65e-05 | 4.65e-05 | 4.65e-05 | 0.0 | 0.00 Modify | 0.55891 | 0.55891 | 0.55891 | 0.0 | 1.19 Other | | 0.07338 | | | 0.16 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351572.0 ave 351572 max 351572 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351572 Ave neighs/atom = 43.946500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.168240461068, Press = 2.23705844363268 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -36386.874 -36386.874 -36707.692 -36707.692 310.28332 310.28332 160489.64 160489.64 395.95871 395.95871 21000 -36385.674 -36385.674 -36715.277 -36715.277 318.77979 318.77979 160424.32 160424.32 754.39723 754.39723 Loop time of 44.3531 on 1 procs for 1000 steps with 8000 atoms Performance: 1.948 ns/day, 12.320 hours/ns, 22.546 timesteps/s 62.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 43.722 | 43.722 | 43.722 | 0.0 | 98.58 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.050026 | 0.050026 | 0.050026 | 0.0 | 0.11 Output | 7.46e-05 | 7.46e-05 | 7.46e-05 | 0.0 | 0.00 Modify | 0.54773 | 0.54773 | 0.54773 | 0.0 | 1.23 Other | | 0.03334 | | | 0.08 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351864.0 ave 351864 max 351864 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351864 Ave neighs/atom = 43.983000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.27386315227, Press = 1.02927776142903 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -36385.674 -36385.674 -36715.277 -36715.277 318.77979 318.77979 160424.32 160424.32 754.39723 754.39723 22000 -36383.258 -36383.258 -36712.243 -36712.243 318.18274 318.18274 160467 160467 531.64025 531.64025 Loop time of 46.699 on 1 procs for 1000 steps with 8000 atoms Performance: 1.850 ns/day, 12.972 hours/ns, 21.414 timesteps/s 59.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 46.057 | 46.057 | 46.057 | 0.0 | 98.63 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.069449 | 0.069449 | 0.069449 | 0.0 | 0.15 Output | 5.01e-05 | 5.01e-05 | 5.01e-05 | 0.0 | 0.00 Modify | 0.53896 | 0.53896 | 0.53896 | 0.0 | 1.15 Other | | 0.03328 | | | 0.07 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 352500.0 ave 352500 max 352500 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 352500 Ave neighs/atom = 44.062500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.256321425522, Press = 0.300446992220164 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -36383.258 -36383.258 -36712.243 -36712.243 318.18274 318.18274 160467 160467 531.64025 531.64025 23000 -36389.468 -36389.468 -36715.065 -36715.065 314.90564 314.90564 160584.54 160584.54 -181.69319 -181.69319 Loop time of 53.1777 on 1 procs for 1000 steps with 8000 atoms Performance: 1.625 ns/day, 14.772 hours/ns, 18.805 timesteps/s 52.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 52.409 | 52.409 | 52.409 | 0.0 | 98.55 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.084017 | 0.084017 | 0.084017 | 0.0 | 0.16 Output | 3.73e-05 | 3.73e-05 | 3.73e-05 | 0.0 | 0.00 Modify | 0.63137 | 0.63137 | 0.63137 | 0.0 | 1.19 Other | | 0.05356 | | | 0.10 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 352258.0 ave 352258 max 352258 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 352258 Ave neighs/atom = 44.032250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 160552.400818841 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0