# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.427092581987381*${_u_distance} variable latticeconst_converted equal 5.427092581987381*1 lattice diamond ${latticeconst_converted} lattice diamond 5.42709258198738 Lattice spacing in x,y,z = 5.4270926 5.4270926 5.4270926 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (54.270926 54.270926 54.270926) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (54.270926 54.270926 54.270926) create_atoms CPU = 0.008 seconds variable mass_converted equal 28.0855*${_u_mass} variable mass_converted equal 28.0855*1 kim_interactions Si WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Si #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_KangEunJun_2014_SiC__MO_477506997611_001 pair_coeff * * Si #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 28.0855 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 159845.969888008 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 159845.969888008/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 159845.969888008/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 159845.969888008/(1*1*${_u_distance}) variable V0_metal equal 159845.969888008/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 159845.969888008*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 159845.969888008 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_477506997611_001#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.689 | 4.689 | 4.689 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -36716.218 -36716.218 -37040 -37040 313.15 313.15 159845.97 159845.97 2163.5478 2163.5478 1000 -36363.968 -36363.968 -36705.746 -36705.746 330.55487 330.55487 160508.26 160508.26 345.33721 345.33721 Loop time of 137.378 on 1 procs for 1000 steps with 8000 atoms Performance: 0.629 ns/day, 38.161 hours/ns, 7.279 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 135.4 | 135.4 | 135.4 | 0.0 | 98.56 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22832 | 0.22832 | 0.22832 | 0.0 | 0.17 Output | 0.00027707 | 0.00027707 | 0.00027707 | 0.0 | 0.00 Modify | 1.5731 | 1.5731 | 1.5731 | 0.0 | 1.15 Other | | 0.1776 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 368000.0 ave 368000 max 368000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 368000 Ave neighs/atom = 46.000000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -36363.968 -36363.968 -36705.746 -36705.746 330.55487 330.55487 160508.26 160508.26 345.33721 345.33721 2000 -36398.673 -36398.673 -36708.008 -36708.008 299.17662 299.17662 160562.44 160562.44 -68.343673 -68.343673 Loop time of 132.816 on 1 procs for 1000 steps with 8000 atoms Performance: 0.651 ns/day, 36.893 hours/ns, 7.529 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 130.89 | 130.89 | 130.89 | 0.0 | 98.55 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22376 | 0.22376 | 0.22376 | 0.0 | 0.17 Output | 0.00026312 | 0.00026312 | 0.00026312 | 0.0 | 0.00 Modify | 1.526 | 1.526 | 1.526 | 0.0 | 1.15 Other | | 0.1768 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351936.0 ave 351936 max 351936 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351936 Ave neighs/atom = 43.992000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -36398.673 -36398.673 -36708.008 -36708.008 299.17662 299.17662 160562.44 160562.44 -68.343673 -68.343673 3000 -36381.394 -36381.394 -36711.776 -36711.776 319.53324 319.53324 160616.17 160616.17 -326.65407 -326.65407 Loop time of 120.673 on 1 procs for 1000 steps with 8000 atoms Performance: 0.716 ns/day, 33.520 hours/ns, 8.287 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 118.97 | 118.97 | 118.97 | 0.0 | 98.59 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2097 | 0.2097 | 0.2097 | 0.0 | 0.17 Output | 0.00026333 | 0.00026333 | 0.00026333 | 0.0 | 0.00 Modify | 1.3286 | 1.3286 | 1.3286 | 0.0 | 1.10 Other | | 0.1633 | | | 0.14 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351640.0 ave 351640 max 351640 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351640 Ave neighs/atom = 43.955000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -36381.394 -36381.394 -36711.776 -36711.776 319.53324 319.53324 160616.17 160616.17 -326.65407 -326.65407 4000 -36389.84 -36389.84 -36711.367 -36711.367 310.96918 310.96918 160585.71 160585.71 -190.13409 -190.13409 Loop time of 139.949 on 1 procs for 1000 steps with 8000 atoms Performance: 0.617 ns/day, 38.875 hours/ns, 7.145 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 137.9 | 137.9 | 137.9 | 0.0 | 98.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22817 | 0.22817 | 0.22817 | 0.0 | 0.16 Output | 0.00026389 | 0.00026389 | 0.00026389 | 0.0 | 0.00 Modify | 1.6416 | 1.6416 | 1.6416 | 0.0 | 1.17 Other | | 0.183 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351686.0 ave 351686 max 351686 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351686 Ave neighs/atom = 43.960750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -36389.84 -36389.84 -36711.367 -36711.367 310.96918 310.96918 160585.71 160585.71 -190.13409 -190.13409 5000 -36388.815 -36388.815 -36711.129 -36711.129 311.73059 311.73059 160434.73 160434.73 659.27606 659.27606 Loop time of 140.017 on 1 procs for 1000 steps with 8000 atoms Performance: 0.617 ns/day, 38.894 hours/ns, 7.142 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 137.96 | 137.96 | 137.96 | 0.0 | 98.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22889 | 0.22889 | 0.22889 | 0.0 | 0.16 Output | 0.00028757 | 0.00028757 | 0.00028757 | 0.0 | 0.00 Modify | 1.6478 | 1.6478 | 1.6478 | 0.0 | 1.18 Other | | 0.1838 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351884.0 ave 351884 max 351884 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351884 Ave neighs/atom = 43.985500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 314.348451560451, Press = 484.368192228532 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -36388.815 -36388.815 -36711.129 -36711.129 311.73059 311.73059 160434.73 160434.73 659.27606 659.27606 6000 -36384.001 -36384.001 -36702.96 -36702.96 308.48529 308.48529 160468.77 160468.77 418.12839 418.12839 Loop time of 136.924 on 1 procs for 1000 steps with 8000 atoms Performance: 0.631 ns/day, 38.034 hours/ns, 7.303 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.86 | 134.86 | 134.86 | 0.0 | 98.49 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24749 | 0.24749 | 0.24749 | 0.0 | 0.18 Output | 0.00022946 | 0.00022946 | 0.00022946 | 0.0 | 0.00 Modify | 1.6333 | 1.6333 | 1.6333 | 0.0 | 1.19 Other | | 0.1809 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 352346.0 ave 352346 max 352346 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 352346 Ave neighs/atom = 44.043250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.731776185361, Press = 15.853531860072 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -36384.001 -36384.001 -36702.96 -36702.96 308.48529 308.48529 160468.77 160468.77 418.12839 418.12839 7000 -36391.77 -36391.77 -36709.442 -36709.442 307.24089 307.24089 160552.32 160552.32 -132.8322 -132.8322 Loop time of 122.559 on 1 procs for 1000 steps with 8000 atoms Performance: 0.705 ns/day, 34.044 hours/ns, 8.159 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 120.79 | 120.79 | 120.79 | 0.0 | 98.56 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21231 | 0.21231 | 0.21231 | 0.0 | 0.17 Output | 0.00026837 | 0.00026837 | 0.00026837 | 0.0 | 0.00 Modify | 1.3916 | 1.3916 | 1.3916 | 0.0 | 1.14 Other | | 0.1651 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351484.0 ave 351484 max 351484 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351484 Ave neighs/atom = 43.935500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.115378424628, Press = 9.04083913252059 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -36391.77 -36391.77 -36709.442 -36709.442 307.24089 307.24089 160552.32 160552.32 -132.8322 -132.8322 8000 -36381.221 -36381.221 -36709.787 -36709.787 317.77739 317.77739 160552.37 160552.37 4.0289297 4.0289297 Loop time of 136.662 on 1 procs for 1000 steps with 8000 atoms Performance: 0.632 ns/day, 37.962 hours/ns, 7.317 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.62 | 134.62 | 134.62 | 0.0 | 98.50 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22558 | 0.22558 | 0.22558 | 0.0 | 0.17 Output | 0.00022274 | 0.00022274 | 0.00022274 | 0.0 | 0.00 Modify | 1.6405 | 1.6405 | 1.6405 | 0.0 | 1.20 Other | | 0.1793 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351656.0 ave 351656 max 351656 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351656 Ave neighs/atom = 43.957000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.09070169957, Press = 6.36120977925843 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -36381.221 -36381.221 -36709.787 -36709.787 317.77739 317.77739 160552.37 160552.37 4.0289297 4.0289297 9000 -36391.455 -36391.455 -36715.108 -36715.108 313.02502 313.02502 160490.73 160490.73 390.37093 390.37093 Loop time of 120.683 on 1 procs for 1000 steps with 8000 atoms Performance: 0.716 ns/day, 33.523 hours/ns, 8.286 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 118.95 | 118.95 | 118.95 | 0.0 | 98.56 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20616 | 0.20616 | 0.20616 | 0.0 | 0.17 Output | 0.00022243 | 0.00022243 | 0.00022243 | 0.0 | 0.00 Modify | 1.3683 | 1.3683 | 1.3683 | 0.0 | 1.13 Other | | 0.1626 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351766.0 ave 351766 max 351766 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351766 Ave neighs/atom = 43.970750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.042671567785, Press = 3.81996081603313 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -36391.455 -36391.455 -36715.108 -36715.108 313.02502 313.02502 160490.73 160490.73 390.37093 390.37093 10000 -36384.246 -36384.246 -36715.076 -36715.076 319.96632 319.96632 160498.1 160498.1 428.6922 428.6922 Loop time of 123.564 on 1 procs for 1000 steps with 8000 atoms Performance: 0.699 ns/day, 34.323 hours/ns, 8.093 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 121.77 | 121.77 | 121.77 | 0.0 | 98.55 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21214 | 0.21214 | 0.21214 | 0.0 | 0.17 Output | 0.00030093 | 0.00030093 | 0.00030093 | 0.0 | 0.00 Modify | 1.4165 | 1.4165 | 1.4165 | 0.0 | 1.15 Other | | 0.1636 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351962.0 ave 351962 max 351962 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351962 Ave neighs/atom = 43.995250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.16385374708, Press = 1.68013772752346 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -36384.246 -36384.246 -36715.076 -36715.076 319.96632 319.96632 160498.1 160498.1 428.6922 428.6922 11000 -36386.553 -36386.553 -36711.913 -36711.913 314.67617 314.67617 160620.67 160620.67 -399.73018 -399.73018 Loop time of 139.168 on 1 procs for 1000 steps with 8000 atoms Performance: 0.621 ns/day, 38.658 hours/ns, 7.186 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 137.08 | 137.08 | 137.08 | 0.0 | 98.50 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23277 | 0.23277 | 0.23277 | 0.0 | 0.17 Output | 0.00022579 | 0.00022579 | 0.00022579 | 0.0 | 0.00 Modify | 1.6674 | 1.6674 | 1.6674 | 0.0 | 1.20 Other | | 0.1833 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 352274.0 ave 352274 max 352274 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 352274 Ave neighs/atom = 44.034250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.205207903384, Press = -0.40539592924835 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -36386.553 -36386.553 -36711.913 -36711.913 314.67617 314.67617 160620.67 160620.67 -399.73018 -399.73018 12000 -36384.284 -36384.284 -36714.672 -36714.672 319.53916 319.53916 160690.41 160690.41 -646.74828 -646.74828 Loop time of 125.673 on 1 procs for 1000 steps with 8000 atoms Performance: 0.687 ns/day, 34.909 hours/ns, 7.957 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 123.84 | 123.84 | 123.84 | 0.0 | 98.54 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21247 | 0.21247 | 0.21247 | 0.0 | 0.17 Output | 0.00022695 | 0.00022695 | 0.00022695 | 0.0 | 0.00 Modify | 1.4484 | 1.4484 | 1.4484 | 0.0 | 1.15 Other | | 0.1682 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351636.0 ave 351636 max 351636 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351636 Ave neighs/atom = 43.954500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.456917459053, Press = 2.55951767772537 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -36384.284 -36384.284 -36714.672 -36714.672 319.53916 319.53916 160690.41 160690.41 -646.74828 -646.74828 13000 -36386.256 -36386.256 -36715 -36715 317.94866 317.94866 160594.96 160594.96 -191.55669 -191.55669 Loop time of 118.825 on 1 procs for 1000 steps with 8000 atoms Performance: 0.727 ns/day, 33.007 hours/ns, 8.416 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 117.12 | 117.12 | 117.12 | 0.0 | 98.57 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20804 | 0.20804 | 0.20804 | 0.0 | 0.18 Output | 0.00028554 | 0.00028554 | 0.00028554 | 0.0 | 0.00 Modify | 1.3301 | 1.3301 | 1.3301 | 0.0 | 1.12 Other | | 0.1617 | | | 0.14 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351932.0 ave 351932 max 351932 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351932 Ave neighs/atom = 43.991500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.395027951776, Press = 5.39875174309206 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -36386.256 -36386.256 -36715 -36715 317.94866 317.94866 160594.96 160594.96 -191.55669 -191.55669 14000 -36391.158 -36391.158 -36715.837 -36715.837 314.01737 314.01737 160483.19 160483.19 459.26958 459.26958 Loop time of 132.757 on 1 procs for 1000 steps with 8000 atoms Performance: 0.651 ns/day, 36.877 hours/ns, 7.533 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 130.78 | 130.78 | 130.78 | 0.0 | 98.51 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22424 | 0.22424 | 0.22424 | 0.0 | 0.17 Output | 0.00022694 | 0.00022694 | 0.00022694 | 0.0 | 0.00 Modify | 1.5778 | 1.5778 | 1.5778 | 0.0 | 1.19 Other | | 0.176 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 352020.0 ave 352020 max 352020 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 352020 Ave neighs/atom = 44.002500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.316142942055, Press = 2.80626296762247 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -36391.158 -36391.158 -36715.837 -36715.837 314.01737 314.01737 160483.19 160483.19 459.26958 459.26958 15000 -36381.396 -36381.396 -36708.948 -36708.948 316.79601 316.79601 160495.03 160495.03 412.80017 412.80017 Loop time of 120.71 on 1 procs for 1000 steps with 8000 atoms Performance: 0.716 ns/day, 33.531 hours/ns, 8.284 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 118.98 | 118.98 | 118.98 | 0.0 | 98.56 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20836 | 0.20836 | 0.20836 | 0.0 | 0.17 Output | 0.00032772 | 0.00032772 | 0.00032772 | 0.0 | 0.00 Modify | 1.3626 | 1.3626 | 1.3626 | 0.0 | 1.13 Other | | 0.1611 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 352246.0 ave 352246 max 352246 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 352246 Ave neighs/atom = 44.030750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.366108277178, Press = 1.61514996713864 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -36381.396 -36381.396 -36708.948 -36708.948 316.79601 316.79601 160495.03 160495.03 412.80017 412.80017 16000 -36389.55 -36389.55 -36710.01 -36710.01 309.93794 309.93794 160518.74 160518.74 116.89185 116.89185 Loop time of 119.386 on 1 procs for 1000 steps with 8000 atoms Performance: 0.724 ns/day, 33.163 hours/ns, 8.376 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 117.67 | 117.67 | 117.67 | 0.0 | 98.57 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20958 | 0.20958 | 0.20958 | 0.0 | 0.18 Output | 0.00022891 | 0.00022891 | 0.00022891 | 0.0 | 0.00 Modify | 1.3411 | 1.3411 | 1.3411 | 0.0 | 1.12 Other | | 0.161 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351980.0 ave 351980 max 351980 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351980 Ave neighs/atom = 43.997500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.347152129097, Press = 0.824265880062031 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -36389.55 -36389.55 -36710.01 -36710.01 309.93794 309.93794 160518.74 160518.74 116.89185 116.89185 17000 -36382.705 -36382.705 -36705.409 -36705.409 312.10723 312.10723 160597.43 160597.43 -229.68495 -229.68495 Loop time of 118.755 on 1 procs for 1000 steps with 8000 atoms Performance: 0.728 ns/day, 32.987 hours/ns, 8.421 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 117.06 | 117.06 | 117.06 | 0.0 | 98.57 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20965 | 0.20965 | 0.20965 | 0.0 | 0.18 Output | 0.00022643 | 0.00022643 | 0.00022643 | 0.0 | 0.00 Modify | 1.3279 | 1.3279 | 1.3279 | 0.0 | 1.12 Other | | 0.1614 | | | 0.14 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351898.0 ave 351898 max 351898 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351898 Ave neighs/atom = 43.987250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.333048152229, Press = 0.236462383393122 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -36382.705 -36382.705 -36705.409 -36705.409 312.10723 312.10723 160597.43 160597.43 -229.68495 -229.68495 18000 -36387.423 -36387.423 -36707.901 -36707.901 309.95439 309.95439 160760.36 160760.36 -1231.5198 -1231.5198 Loop time of 118.75 on 1 procs for 1000 steps with 8000 atoms Performance: 0.728 ns/day, 32.986 hours/ns, 8.421 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 117.05 | 117.05 | 117.05 | 0.0 | 98.57 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20722 | 0.20722 | 0.20722 | 0.0 | 0.17 Output | 0.00022555 | 0.00022555 | 0.00022555 | 0.0 | 0.00 Modify | 1.3308 | 1.3308 | 1.3308 | 0.0 | 1.12 Other | | 0.1603 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351274.0 ave 351274 max 351274 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351274 Ave neighs/atom = 43.909250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.268771094743, Press = 0.448540460229985 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -36387.423 -36387.423 -36707.901 -36707.901 309.95439 309.95439 160760.36 160760.36 -1231.5198 -1231.5198 19000 -36388.518 -36388.518 -36712.865 -36712.865 313.69635 313.69635 160635.66 160635.66 -491.29253 -491.29253 Loop time of 118.596 on 1 procs for 1000 steps with 8000 atoms Performance: 0.729 ns/day, 32.943 hours/ns, 8.432 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 116.9 | 116.9 | 116.9 | 0.0 | 98.57 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20876 | 0.20876 | 0.20876 | 0.0 | 0.18 Output | 0.00027535 | 0.00027535 | 0.00027535 | 0.0 | 0.00 Modify | 1.3293 | 1.3293 | 1.3293 | 0.0 | 1.12 Other | | 0.161 | | | 0.14 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 350958.0 ave 350958 max 350958 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 350958 Ave neighs/atom = 43.869750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.219370042872, Press = 2.87443872441052 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -36388.518 -36388.518 -36712.865 -36712.865 313.69635 313.69635 160635.66 160635.66 -491.29253 -491.29253 20000 -36386.874 -36386.874 -36707.692 -36707.692 310.28332 310.28332 160489.64 160489.64 395.9587 395.9587 Loop time of 135.882 on 1 procs for 1000 steps with 8000 atoms Performance: 0.636 ns/day, 37.745 hours/ns, 7.359 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.85 | 133.85 | 133.85 | 0.0 | 98.51 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23449 | 0.23449 | 0.23449 | 0.0 | 0.17 Output | 0.0002241 | 0.0002241 | 0.0002241 | 0.0 | 0.00 Modify | 1.6138 | 1.6138 | 1.6138 | 0.0 | 1.19 Other | | 0.1809 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351572.0 ave 351572 max 351572 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351572 Ave neighs/atom = 43.946500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.168240438483, Press = 2.23705844535203 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -36386.874 -36386.874 -36707.692 -36707.692 310.28332 310.28332 160489.64 160489.64 395.9587 395.9587 21000 -36385.674 -36385.674 -36715.277 -36715.277 318.77978 318.77978 160424.32 160424.32 754.39727 754.39727 Loop time of 117.53 on 1 procs for 1000 steps with 8000 atoms Performance: 0.735 ns/day, 32.647 hours/ns, 8.508 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 115.85 | 115.85 | 115.85 | 0.0 | 98.57 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20402 | 0.20402 | 0.20402 | 0.0 | 0.17 Output | 0.00027042 | 0.00027042 | 0.00027042 | 0.0 | 0.00 Modify | 1.3157 | 1.3157 | 1.3157 | 0.0 | 1.12 Other | | 0.1593 | | | 0.14 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 351864.0 ave 351864 max 351864 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 351864 Ave neighs/atom = 43.983000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.273863056995, Press = 1.02927763717147 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -36385.674 -36385.674 -36715.277 -36715.277 318.77978 318.77978 160424.32 160424.32 754.39727 754.39727 22000 -36383.258 -36383.258 -36712.243 -36712.243 318.18273 318.18273 160467 160467 531.64023 531.64023 Loop time of 117.697 on 1 procs for 1000 steps with 8000 atoms Performance: 0.734 ns/day, 32.694 hours/ns, 8.496 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 116.02 | 116.02 | 116.02 | 0.0 | 98.57 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20413 | 0.20413 | 0.20413 | 0.0 | 0.17 Output | 0.00022464 | 0.00022464 | 0.00022464 | 0.0 | 0.00 Modify | 1.3168 | 1.3168 | 1.3168 | 0.0 | 1.12 Other | | 0.1591 | | | 0.14 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 352500.0 ave 352500 max 352500 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 352500 Ave neighs/atom = 44.062500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.256321289291, Press = 0.300447167782338 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6 ghost atom cutoff = 6 binsize = 3, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.691 | 4.691 | 4.691 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -36383.258 -36383.258 -36712.243 -36712.243 318.18273 318.18273 160467 160467 531.64023 531.64023 23000 -36389.468 -36389.468 -36715.065 -36715.065 314.90565 314.90565 160584.54 160584.54 -181.69308 -181.69308 Loop time of 117.602 on 1 procs for 1000 steps with 8000 atoms Performance: 0.735 ns/day, 32.667 hours/ns, 8.503 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 115.92 | 115.92 | 115.92 | 0.0 | 98.57 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20461 | 0.20461 | 0.20461 | 0.0 | 0.17 Output | 0.00022417 | 0.00022417 | 0.00022417 | 0.0 | 0.00 Modify | 1.3154 | 1.3154 | 1.3154 | 0.0 | 1.12 Other | | 0.1583 | | | 0.13 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 352258.0 ave 352258 max 352258 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 352258 Ave neighs/atom = 44.032250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 160552.400819047 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0