# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.430545687675476*${_u_distance} variable latticeconst_converted equal 5.430545687675476*1 lattice diamond ${latticeconst_converted} lattice diamond 5.43054568767548 Lattice spacing in x,y,z = 5.4305457 5.4305457 5.4305457 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (54.305457 54.305457 54.305457) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms create_atoms CPU = 0.001 seconds variable mass_converted equal 28.0855*${_u_mass} variable mass_converted equal 28.0855*1 kim_interactions Si #=== BEGIN kim_interactions ================================== pair_style kim MEAM_LAMMPS_LenoskySadighAlonso_2000_Si__MO_533426548156_000 pair_coeff * * Si #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 28.0855 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 160151.280490546 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 160151.280490546/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 160151.280490546/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 160151.280490546/(1*1*${_u_distance}) variable V0_metal equal 160151.280490546/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 160151.280490546*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 160151.280490546 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 333.15*${_u_temperature} variable temp_converted equal 333.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 333.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "333.15 - 0.2" variable T_up equal "333.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.677 | 4.677 | 4.677 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -36509.899 -36509.899 -36854.36 -36854.36 333.15 333.15 160151.28 160151.28 2297.3495 2297.3495 1000 -36116.69 -36116.69 -36460.865 -36460.865 332.87291 332.87291 158396.92 158396.92 214.4868 214.4868 Loop time of 59.7386 on 1 procs for 1000 steps with 8000 atoms Performance: 1.446 ns/day, 16.594 hours/ns, 16.740 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 59.405 | 59.405 | 59.405 | 0.0 | 99.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038834 | 0.038834 | 0.038834 | 0.0 | 0.07 Output | 5e-05 | 5e-05 | 5e-05 | 0.0 | 0.00 Modify | 0.2675 | 0.2675 | 0.2675 | 0.0 | 0.45 Other | | 0.02688 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 368000.0 ave 368000 max 368000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 368000 Ave neighs/atom = 46.000000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -36116.69 -36116.69 -36460.865 -36460.865 332.87291 332.87291 158396.92 158396.92 214.4868 214.4868 2000 -36154.409 -36154.409 -36494.263 -36494.263 328.69438 328.69438 158520.25 158520.25 407.17252 407.17252 Loop time of 58.846 on 1 procs for 1000 steps with 8000 atoms Performance: 1.468 ns/day, 16.346 hours/ns, 16.994 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.518 | 58.518 | 58.518 | 0.0 | 99.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037936 | 0.037936 | 0.037936 | 0.0 | 0.06 Output | 5.74e-05 | 5.74e-05 | 5.74e-05 | 0.0 | 0.00 Modify | 0.26385 | 0.26385 | 0.26385 | 0.0 | 0.45 Other | | 0.02637 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 390912.0 ave 390912 max 390912 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 390912 Ave neighs/atom = 48.864000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -36154.409 -36154.409 -36494.263 -36494.263 328.69438 328.69438 158520.25 158520.25 407.17252 407.17252 3000 -36128.334 -36128.334 -36477.266 -36477.266 337.4745 337.4745 158366.17 158366.17 230.80921 230.80921 Loop time of 58.9809 on 1 procs for 1000 steps with 8000 atoms Performance: 1.465 ns/day, 16.384 hours/ns, 16.955 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.653 | 58.653 | 58.653 | 0.0 | 99.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037906 | 0.037906 | 0.037906 | 0.0 | 0.06 Output | 4.84e-05 | 4.84e-05 | 4.84e-05 | 0.0 | 0.00 Modify | 0.26372 | 0.26372 | 0.26372 | 0.0 | 0.45 Other | | 0.02633 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 388140.0 ave 388140 max 388140 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 388140 Ave neighs/atom = 48.517500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -36128.334 -36128.334 -36477.266 -36477.266 337.4745 337.4745 158366.17 158366.17 230.80921 230.80921 4000 -36150.224 -36150.224 -36488.52 -36488.52 327.18736 327.18736 158532.74 158532.74 -46.137569 -46.137569 Loop time of 58.4092 on 1 procs for 1000 steps with 8000 atoms Performance: 1.479 ns/day, 16.225 hours/ns, 17.121 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.083 | 58.083 | 58.083 | 0.0 | 99.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037628 | 0.037628 | 0.037628 | 0.0 | 0.06 Output | 4.78e-05 | 4.78e-05 | 4.78e-05 | 0.0 | 0.00 Modify | 0.26239 | 0.26239 | 0.26239 | 0.0 | 0.45 Other | | 0.02616 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6726.00 ave 6726 max 6726 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 391102.0 ave 391102 max 391102 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 391102 Ave neighs/atom = 48.887750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -36150.224 -36150.224 -36488.52 -36488.52 327.18736 327.18736 158532.74 158532.74 -46.137569 -46.137569 5000 -36130.67 -36130.67 -36477.46 -36477.46 335.40258 335.40258 158328.01 158328.01 645.84298 645.84298 Loop time of 58.2541 on 1 procs for 1000 steps with 8000 atoms Performance: 1.483 ns/day, 16.182 hours/ns, 17.166 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 57.927 | 57.927 | 57.927 | 0.0 | 99.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037865 | 0.037865 | 0.037865 | 0.0 | 0.06 Output | 3.65e-05 | 3.65e-05 | 3.65e-05 | 0.0 | 0.00 Modify | 0.26294 | 0.26294 | 0.26294 | 0.0 | 0.45 Other | | 0.02617 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6729.00 ave 6729 max 6729 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 389076.0 ave 389076 max 389076 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 389076 Ave neighs/atom = 48.634500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 335.453379643692, Press = 34.1134955933266 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -36130.67 -36130.67 -36477.46 -36477.46 335.40258 335.40258 158328.01 158328.01 645.84298 645.84298 6000 -36148.109 -36148.109 -36485.973 -36485.973 326.76984 326.76984 158430.17 158430.17 191.22865 191.22865 Loop time of 58.9803 on 1 procs for 1000 steps with 8000 atoms Performance: 1.465 ns/day, 16.383 hours/ns, 16.955 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.646 | 58.646 | 58.646 | 0.0 | 99.43 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037848 | 0.037848 | 0.037848 | 0.0 | 0.06 Output | 4.44e-05 | 4.44e-05 | 4.44e-05 | 0.0 | 0.00 Modify | 0.26976 | 0.26976 | 0.26976 | 0.0 | 0.46 Other | | 0.02627 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6726.00 ave 6726 max 6726 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 390598.0 ave 390598 max 390598 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 390598 Ave neighs/atom = 48.824750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.531502100238, Press = -29.1257771079985 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -36148.109 -36148.109 -36485.973 -36485.973 326.76984 326.76984 158430.17 158430.17 191.22865 191.22865 7000 -36132.554 -36132.554 -36482.052 -36482.052 338.02153 338.02153 158464.38 158464.38 263.33027 263.33027 Loop time of 58.806 on 1 procs for 1000 steps with 8000 atoms Performance: 1.469 ns/day, 16.335 hours/ns, 17.005 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.472 | 58.472 | 58.472 | 0.0 | 99.43 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037979 | 0.037979 | 0.037979 | 0.0 | 0.06 Output | 3.67e-05 | 3.67e-05 | 3.67e-05 | 0.0 | 0.00 Modify | 0.26972 | 0.26972 | 0.26972 | 0.0 | 0.46 Other | | 0.02636 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 390002.0 ave 390002 max 390002 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 390002 Ave neighs/atom = 48.750250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.262596877784, Press = -9.87830219989637 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -36132.554 -36132.554 -36482.052 -36482.052 338.02153 338.02153 158464.38 158464.38 263.33027 263.33027 8000 -36145.837 -36145.837 -36485.574 -36485.574 328.58133 328.58133 158503.67 158503.67 -335.31889 -335.31889 Loop time of 60.2244 on 1 procs for 1000 steps with 8000 atoms Performance: 1.435 ns/day, 16.729 hours/ns, 16.605 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 59.886 | 59.886 | 59.886 | 0.0 | 99.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.03842 | 0.03842 | 0.03842 | 0.0 | 0.06 Output | 3.64e-05 | 3.64e-05 | 3.64e-05 | 0.0 | 0.00 Modify | 0.2732 | 0.2732 | 0.2732 | 0.0 | 0.45 Other | | 0.02677 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6726.00 ave 6726 max 6726 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 389678.0 ave 389678 max 389678 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 389678 Ave neighs/atom = 48.709750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.274374440221, Press = -10.6896024110947 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -36145.837 -36145.837 -36485.574 -36485.574 328.58133 328.58133 158503.67 158503.67 -335.31889 -335.31889 9000 -36134.024 -36134.024 -36481.121 -36481.121 335.69893 335.69893 158583.93 158583.93 -473.37746 -473.37746 Loop time of 58.7293 on 1 procs for 1000 steps with 8000 atoms Performance: 1.471 ns/day, 16.314 hours/ns, 17.027 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.396 | 58.396 | 58.396 | 0.0 | 99.43 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037978 | 0.037978 | 0.037978 | 0.0 | 0.06 Output | 4.46e-05 | 4.46e-05 | 4.46e-05 | 0.0 | 0.00 Modify | 0.2694 | 0.2694 | 0.2694 | 0.0 | 0.46 Other | | 0.02613 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 389844.0 ave 389844 max 389844 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 389844 Ave neighs/atom = 48.730500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.211051041791, Press = 2.89312028612997 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -36134.024 -36134.024 -36481.121 -36481.121 335.69893 335.69893 158583.93 158583.93 -473.37746 -473.37746 10000 -36146.033 -36146.033 -36489.108 -36489.108 331.80892 331.80892 158470.84 158470.84 80.780313 80.780313 Loop time of 58.4246 on 1 procs for 1000 steps with 8000 atoms Performance: 1.479 ns/day, 16.229 hours/ns, 17.116 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.092 | 58.092 | 58.092 | 0.0 | 99.43 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037989 | 0.037989 | 0.037989 | 0.0 | 0.07 Output | 3.64e-05 | 3.64e-05 | 3.64e-05 | 0.0 | 0.00 Modify | 0.26801 | 0.26801 | 0.26801 | 0.0 | 0.46 Other | | 0.02614 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 389170.0 ave 389170 max 389170 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 389170 Ave neighs/atom = 48.646250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.241238267713, Press = 1.3054811317788 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -36146.033 -36146.033 -36489.108 -36489.108 331.80892 331.80892 158470.84 158470.84 80.780313 80.780313 11000 -36131.684 -36131.684 -36479.15 -36479.15 336.05612 336.05612 158527.06 158527.06 -315.19341 -315.19341 Loop time of 58.1569 on 1 procs for 1000 steps with 8000 atoms Performance: 1.486 ns/day, 16.155 hours/ns, 17.195 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 57.825 | 57.825 | 57.825 | 0.0 | 99.43 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037736 | 0.037736 | 0.037736 | 0.0 | 0.06 Output | 4.47e-05 | 4.47e-05 | 4.47e-05 | 0.0 | 0.00 Modify | 0.26792 | 0.26792 | 0.26792 | 0.0 | 0.46 Other | | 0.02606 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6727.00 ave 6727 max 6727 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 389640.0 ave 389640 max 389640 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 389640 Ave neighs/atom = 48.705000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.286846082915, Press = 0.812920694902163 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -36131.684 -36131.684 -36479.15 -36479.15 336.05612 336.05612 158527.06 158527.06 -315.19341 -315.19341 12000 -36143.378 -36143.378 -36489.483 -36489.483 334.73975 334.73975 158453.25 158453.25 164.50849 164.50849 Loop time of 58.3958 on 1 procs for 1000 steps with 8000 atoms Performance: 1.480 ns/day, 16.221 hours/ns, 17.125 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.063 | 58.063 | 58.063 | 0.0 | 99.43 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037794 | 0.037794 | 0.037794 | 0.0 | 0.06 Output | 5.46e-05 | 5.46e-05 | 5.46e-05 | 0.0 | 0.00 Modify | 0.26902 | 0.26902 | 0.26902 | 0.0 | 0.46 Other | | 0.02615 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6727.00 ave 6727 max 6727 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 389906.0 ave 389906 max 389906 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 389906 Ave neighs/atom = 48.738250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.336719935682, Press = 0.261331970525504 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -36143.378 -36143.378 -36489.483 -36489.483 334.73975 334.73975 158453.25 158453.25 164.50849 164.50849 13000 -36135.994 -36135.994 -36480.808 -36480.808 333.49062 333.49062 158569.66 158569.66 -609.16344 -609.16344 Loop time of 58.0993 on 1 procs for 1000 steps with 8000 atoms Performance: 1.487 ns/day, 16.139 hours/ns, 17.212 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 57.766 | 57.766 | 57.766 | 0.0 | 99.43 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.03789 | 0.03789 | 0.03789 | 0.0 | 0.07 Output | 3.64e-05 | 3.64e-05 | 3.64e-05 | 0.0 | 0.00 Modify | 0.26894 | 0.26894 | 0.26894 | 0.0 | 0.46 Other | | 0.0261 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6726.00 ave 6726 max 6726 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 389734.0 ave 389734 max 389734 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 389734 Ave neighs/atom = 48.716750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.437286462995, Press = -2.42471378292428 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -36135.994 -36135.994 -36480.808 -36480.808 333.49062 333.49062 158569.66 158569.66 -609.16344 -609.16344 14000 -36145.614 -36145.614 -36485.723 -36485.723 328.94079 328.94079 158652.13 158652.13 -932.37638 -932.37638 Loop time of 58.0976 on 1 procs for 1000 steps with 8000 atoms Performance: 1.487 ns/day, 16.138 hours/ns, 17.212 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 57.766 | 57.766 | 57.766 | 0.0 | 99.43 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037757 | 0.037757 | 0.037757 | 0.0 | 0.06 Output | 6.32e-05 | 6.32e-05 | 6.32e-05 | 0.0 | 0.00 Modify | 0.26816 | 0.26816 | 0.26816 | 0.0 | 0.46 Other | | 0.02604 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 389656.0 ave 389656 max 389656 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 389656 Ave neighs/atom = 48.707000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.429443611039, Press = -1.19176442958534 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -36145.614 -36145.614 -36485.723 -36485.723 328.94079 328.94079 158652.13 158652.13 -932.37638 -932.37638 15000 -36136.892 -36136.892 -36482.223 -36482.223 333.99089 333.99089 158486.77 158486.77 -197.9809 -197.9809 Loop time of 58.4803 on 1 procs for 1000 steps with 8000 atoms Performance: 1.477 ns/day, 16.245 hours/ns, 17.100 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.147 | 58.147 | 58.147 | 0.0 | 99.43 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037783 | 0.037783 | 0.037783 | 0.0 | 0.06 Output | 4.43e-05 | 4.43e-05 | 4.43e-05 | 0.0 | 0.00 Modify | 0.26887 | 0.26887 | 0.26887 | 0.0 | 0.46 Other | | 0.02623 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6726.00 ave 6726 max 6726 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 389124.0 ave 389124 max 389124 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 389124 Ave neighs/atom = 48.640500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.264687778592, Press = 0.79902730762021 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -36136.892 -36136.892 -36482.223 -36482.223 333.99089 333.99089 158486.77 158486.77 -197.9809 -197.9809 16000 -36151.008 -36151.008 -36485.095 -36485.095 323.11656 323.11656 158387.87 158387.87 501.29749 501.29749 Loop time of 58.287 on 1 procs for 1000 steps with 8000 atoms Performance: 1.482 ns/day, 16.191 hours/ns, 17.156 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 57.955 | 57.955 | 57.955 | 0.0 | 99.43 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.03776 | 0.03776 | 0.03776 | 0.0 | 0.06 Output | 3.65e-05 | 3.65e-05 | 3.65e-05 | 0.0 | 0.00 Modify | 0.26797 | 0.26797 | 0.26797 | 0.0 | 0.46 Other | | 0.02601 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6727.00 ave 6727 max 6727 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 390000.0 ave 390000 max 390000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 390000 Ave neighs/atom = 48.750000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.196733464136, Press = 0.315390506240811 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -36151.008 -36151.008 -36485.095 -36485.095 323.11656 323.11656 158387.87 158387.87 501.29749 501.29749 17000 -36135.792 -36135.792 -36480.374 -36480.374 333.26643 333.26643 158425.71 158425.71 48.076356 48.076356 Loop time of 59.5681 on 1 procs for 1000 steps with 8000 atoms Performance: 1.450 ns/day, 16.547 hours/ns, 16.788 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 59.232 | 59.232 | 59.232 | 0.0 | 99.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038094 | 0.038094 | 0.038094 | 0.0 | 0.06 Output | 4.49e-05 | 4.49e-05 | 4.49e-05 | 0.0 | 0.00 Modify | 0.27145 | 0.27145 | 0.27145 | 0.0 | 0.46 Other | | 0.02664 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6727.00 ave 6727 max 6727 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 390072.0 ave 390072 max 390072 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 390072 Ave neighs/atom = 48.759000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.127993674654, Press = -0.498380191399889 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -36135.792 -36135.792 -36480.374 -36480.374 333.26643 333.26643 158425.71 158425.71 48.076356 48.076356 18000 -36134.74 -36134.74 -36483.037 -36483.037 336.85987 336.85987 158406.54 158406.54 287.73333 287.73333 Loop time of 58.1154 on 1 procs for 1000 steps with 8000 atoms Performance: 1.487 ns/day, 16.143 hours/ns, 17.207 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 57.784 | 57.784 | 57.784 | 0.0 | 99.43 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037834 | 0.037834 | 0.037834 | 0.0 | 0.07 Output | 4.45e-05 | 4.45e-05 | 4.45e-05 | 0.0 | 0.00 Modify | 0.26746 | 0.26746 | 0.26746 | 0.0 | 0.46 Other | | 0.02601 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 390532.0 ave 390532 max 390532 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 390532 Ave neighs/atom = 48.816500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.153711807033, Press = -0.406156017830699 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -36134.74 -36134.74 -36483.037 -36483.037 336.85987 336.85987 158406.54 158406.54 287.73333 287.73333 19000 -36132.768 -36132.768 -36482.622 -36482.622 338.3662 338.3662 158439.3 158439.3 133.37184 133.37184 Loop time of 58.3227 on 1 procs for 1000 steps with 8000 atoms Performance: 1.481 ns/day, 16.201 hours/ns, 17.146 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 57.991 | 57.991 | 57.991 | 0.0 | 99.43 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037601 | 0.037601 | 0.037601 | 0.0 | 0.06 Output | 3.68e-05 | 3.68e-05 | 3.68e-05 | 0.0 | 0.00 Modify | 0.26812 | 0.26812 | 0.26812 | 0.0 | 0.46 Other | | 0.02608 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6730.00 ave 6730 max 6730 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 390508.0 ave 390508 max 390508 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 390508 Ave neighs/atom = 48.813500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.218257713378, Press = 1.06837710439057 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -36132.768 -36132.768 -36482.622 -36482.622 338.3662 338.3662 158439.3 158439.3 133.37184 133.37184 20000 -36147.754 -36147.754 -36486.112 -36486.112 327.2473 327.2473 158279.18 158279.18 907.16324 907.16324 Loop time of 58.449 on 1 procs for 1000 steps with 8000 atoms Performance: 1.478 ns/day, 16.236 hours/ns, 17.109 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 58.117 | 58.117 | 58.117 | 0.0 | 99.43 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037911 | 0.037911 | 0.037911 | 0.0 | 0.06 Output | 3.65e-05 | 3.65e-05 | 3.65e-05 | 0.0 | 0.00 Modify | 0.26828 | 0.26828 | 0.26828 | 0.0 | 0.46 Other | | 0.02615 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6727.00 ave 6727 max 6727 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 389978.0 ave 389978 max 389978 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 389978 Ave neighs/atom = 48.747250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.216644447679, Press = 1.10411271030485 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -36147.754 -36147.754 -36486.112 -36486.112 327.2473 327.2473 158279.18 158279.18 907.16324 907.16324 21000 -36139.662 -36139.662 -36480.448 -36480.448 329.59492 329.59492 158397.37 158397.37 72.793131 72.793131 Loop time of 60.3029 on 1 procs for 1000 steps with 8000 atoms Performance: 1.433 ns/day, 16.751 hours/ns, 16.583 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 59.963 | 59.963 | 59.963 | 0.0 | 99.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.038488 | 0.038488 | 0.038488 | 0.0 | 0.06 Output | 6.75e-05 | 6.75e-05 | 6.75e-05 | 0.0 | 0.00 Modify | 0.27467 | 0.27467 | 0.27467 | 0.0 | 0.46 Other | | 0.02684 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6726.00 ave 6726 max 6726 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 390666.0 ave 390666 max 390666 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 390666 Ave neighs/atom = 48.833250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.144162991875, Press = -0.531511097594459 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -36139.662 -36139.662 -36480.448 -36480.448 329.59492 329.59492 158397.37 158397.37 72.793131 72.793131 22000 -36143.96 -36143.96 -36482.962 -36482.962 327.87064 327.87064 158480.61 158480.61 -200.85361 -200.85361 Loop time of 57.5445 on 1 procs for 1000 steps with 8000 atoms Performance: 1.501 ns/day, 15.985 hours/ns, 17.378 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 57.214 | 57.214 | 57.214 | 0.0 | 99.43 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037765 | 0.037765 | 0.037765 | 0.0 | 0.07 Output | 4.39e-05 | 4.39e-05 | 4.39e-05 | 0.0 | 0.00 Modify | 0.26667 | 0.26667 | 0.26667 | 0.0 | 0.46 Other | | 0.02581 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6728.00 ave 6728 max 6728 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 390568.0 ave 390568 max 390568 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 390568 Ave neighs/atom = 48.821000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.153247771833, Press = -1.18628404521936 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -36143.96 -36143.96 -36482.962 -36482.962 327.87064 327.87064 158480.61 158480.61 -200.85361 -200.85361 23000 -36143.236 -36143.236 -36485.949 -36485.949 331.45885 331.45885 158612.57 158612.57 -480.33171 -480.33171 Loop time of 56.3857 on 1 procs for 1000 steps with 8000 atoms Performance: 1.532 ns/day, 15.663 hours/ns, 17.735 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 56.06 | 56.06 | 56.06 | 0.0 | 99.42 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.036934 | 0.036934 | 0.036934 | 0.0 | 0.07 Output | 3.66e-05 | 3.66e-05 | 3.66e-05 | 0.0 | 0.00 Modify | 0.26347 | 0.26347 | 0.26347 | 0.0 | 0.47 Other | | 0.02546 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6726.00 ave 6726 max 6726 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 389942.0 ave 389942 max 389942 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 389942 Ave neighs/atom = 48.742750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.158889904149, Press = -1.59479224531324 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -36143.236 -36143.236 -36485.949 -36485.949 331.45885 331.45885 158612.57 158612.57 -480.33171 -480.33171 24000 -36138.419 -36138.419 -36488.469 -36488.469 338.55576 338.55576 158614.8 158614.8 -429.68279 -429.68279 Loop time of 55.1443 on 1 procs for 1000 steps with 8000 atoms Performance: 1.567 ns/day, 15.318 hours/ns, 18.134 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 54.824 | 54.824 | 54.824 | 0.0 | 99.42 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.036478 | 0.036478 | 0.036478 | 0.0 | 0.07 Output | 3.65e-05 | 3.65e-05 | 3.65e-05 | 0.0 | 0.00 Modify | 0.25894 | 0.25894 | 0.25894 | 0.0 | 0.47 Other | | 0.02493 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 388794.0 ave 388794 max 388794 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 388794 Ave neighs/atom = 48.599250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.067824369608, Press = 0.87600493679841 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -36138.419 -36138.419 -36488.469 -36488.469 338.55576 338.55576 158614.8 158614.8 -429.68279 -429.68279 25000 -36148.587 -36148.587 -36486.878 -36486.878 327.1825 327.1825 158594.16 158594.16 -475.28513 -475.28513 Loop time of 56.2722 on 1 procs for 1000 steps with 8000 atoms Performance: 1.535 ns/day, 15.631 hours/ns, 17.771 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 55.948 | 55.948 | 55.948 | 0.0 | 99.42 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.036703 | 0.036703 | 0.036703 | 0.0 | 0.07 Output | 4.46e-05 | 4.46e-05 | 4.46e-05 | 0.0 | 0.00 Modify | 0.2621 | 0.2621 | 0.2621 | 0.0 | 0.47 Other | | 0.02536 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6729.00 ave 6729 max 6729 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 388680.0 ave 388680 max 388680 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 388680 Ave neighs/atom = 48.585000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.049202291499, Press = 0.554939046724984 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -36148.587 -36148.587 -36486.878 -36486.878 327.1825 327.1825 158594.16 158594.16 -475.28513 -475.28513 26000 -36140.292 -36140.292 -36480.832 -36480.832 329.35788 329.35788 158494.39 158494.39 -185.46488 -185.46488 Loop time of 55.9056 on 1 procs for 1000 steps with 8000 atoms Performance: 1.545 ns/day, 15.529 hours/ns, 17.887 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 55.582 | 55.582 | 55.582 | 0.0 | 99.42 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.036903 | 0.036903 | 0.036903 | 0.0 | 0.07 Output | 3.66e-05 | 3.66e-05 | 3.66e-05 | 0.0 | 0.00 Modify | 0.26158 | 0.26158 | 0.26158 | 0.0 | 0.47 Other | | 0.02528 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 388906.0 ave 388906 max 388906 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 388906 Ave neighs/atom = 48.613250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T333.15.out" else "print 'not_converged' file output/vol_T333.15.out" print '${V}' file output/vol_T333.15.out 158475.308610498 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0