# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.430545687675476*${_u_distance} variable latticeconst_converted equal 5.430545687675476*1 lattice diamond ${latticeconst_converted} lattice diamond 5.43054568767548 Lattice spacing in x,y,z = 5.4305457 5.4305457 5.4305457 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (54.305457 54.305457 54.305457) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0 0 0) to (54.305457 54.305457 54.305457) create_atoms CPU = 0.009 seconds variable mass_converted equal 28.0855*${_u_mass} variable mass_converted equal 28.0855*1 kim_interactions Si WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Si #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_LenoskySadighAlonso_2000_Si__MO_533426548156_002 pair_coeff * * Si #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 28.0855 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 160151.280490546 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 160151.280490546/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 160151.280490546/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 160151.280490546/(1*1*${_u_distance}) variable V0_metal equal 160151.280490546/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 160151.280490546*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 160151.280490546 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_533426548156_002#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.677 | 4.677 | 4.677 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -36592.615 -36592.615 -36854.36 -36854.36 253.15 253.15 160151.28 160151.28 1745.68 1745.68 1000 -36296.33 -36296.33 -36562.02 -36562.02 256.96522 256.96522 158966.6 158966.6 -200.62172 -200.62172 Loop time of 366.295 on 1 procs for 1000 steps with 8000 atoms Performance: 0.236 ns/day, 101.748 hours/ns, 2.730 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 364.59 | 364.59 | 364.59 | 0.0 | 99.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20485 | 0.20485 | 0.20485 | 0.0 | 0.06 Output | 0.00032453 | 0.00032453 | 0.00032453 | 0.0 | 0.00 Modify | 1.3409 | 1.3409 | 1.3409 | 0.0 | 0.37 Other | | 0.1632 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 368000 ave 368000 max 368000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 368000 Ave neighs/atom = 46 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -36296.33 -36296.33 -36562.02 -36562.02 256.96522 256.96522 158966.6 158966.6 -200.62172 -200.62172 2000 -36328.05 -36328.05 -36581.898 -36581.898 245.51178 245.51178 158960.83 158960.83 -286.51285 -286.51285 Loop time of 371.178 on 1 procs for 1000 steps with 8000 atoms Performance: 0.233 ns/day, 103.105 hours/ns, 2.694 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 369.46 | 369.46 | 369.46 | 0.0 | 99.54 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20704 | 0.20704 | 0.20704 | 0.0 | 0.06 Output | 0.00027768 | 0.00027768 | 0.00027768 | 0.0 | 0.00 Modify | 1.3451 | 1.3451 | 1.3451 | 0.0 | 0.36 Other | | 0.1638 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 381368 ave 381368 max 381368 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 381368 Ave neighs/atom = 47.671 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -36328.05 -36328.05 -36581.898 -36581.898 245.51178 245.51178 158960.83 158960.83 -286.51285 -286.51285 3000 -36305.832 -36305.832 -36576.287 -36576.287 261.57479 261.57479 158929.86 158929.86 -51.137011 -51.137011 Loop time of 370.065 on 1 procs for 1000 steps with 8000 atoms Performance: 0.233 ns/day, 102.796 hours/ns, 2.702 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 368.36 | 368.36 | 368.36 | 0.0 | 99.54 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20752 | 0.20752 | 0.20752 | 0.0 | 0.06 Output | 0.00027597 | 0.00027597 | 0.00027597 | 0.0 | 0.00 Modify | 1.3338 | 1.3338 | 1.3338 | 0.0 | 0.36 Other | | 0.1625 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 380762 ave 380762 max 380762 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 380762 Ave neighs/atom = 47.59525 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -36305.832 -36305.832 -36576.287 -36576.287 261.57479 261.57479 158929.86 158929.86 -51.137011 -51.137011 4000 -36322.225 -36322.225 -36579.716 -36579.716 249.03568 249.03568 159075.9 159075.9 -485.00503 -485.00503 Loop time of 369.829 on 1 procs for 1000 steps with 8000 atoms Performance: 0.234 ns/day, 102.730 hours/ns, 2.704 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 368.14 | 368.14 | 368.14 | 0.0 | 99.54 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20397 | 0.20397 | 0.20397 | 0.0 | 0.06 Output | 0.00027116 | 0.00027116 | 0.00027116 | 0.0 | 0.00 Modify | 1.325 | 1.325 | 1.325 | 0.0 | 0.36 Other | | 0.1615 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 381384 ave 381384 max 381384 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 381384 Ave neighs/atom = 47.673 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -36322.225 -36322.225 -36579.716 -36579.716 249.03568 249.03568 159075.9 159075.9 -485.00503 -485.00503 5000 -36312.065 -36312.065 -36574.215 -36574.215 253.54231 253.54231 158862.44 158862.44 255.8859 255.8859 Loop time of 371.192 on 1 procs for 1000 steps with 8000 atoms Performance: 0.233 ns/day, 103.109 hours/ns, 2.694 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 369.48 | 369.48 | 369.48 | 0.0 | 99.54 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20545 | 0.20545 | 0.20545 | 0.0 | 0.06 Output | 0.00027644 | 0.00027644 | 0.00027644 | 0.0 | 0.00 Modify | 1.3476 | 1.3476 | 1.3476 | 0.0 | 0.36 Other | | 0.1634 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 379920 ave 379920 max 379920 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 379920 Ave neighs/atom = 47.49 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 255.826466591571, Press = 109.909801765665 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -36312.065 -36312.065 -36574.215 -36574.215 253.54231 253.54231 158862.44 158862.44 255.8859 255.8859 6000 -36316.909 -36316.909 -36582.302 -36582.302 256.67848 256.67848 158721.56 158721.56 1161.9454 1161.9454 Loop time of 370.961 on 1 procs for 1000 steps with 8000 atoms Performance: 0.233 ns/day, 103.045 hours/ns, 2.696 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 369.22 | 369.22 | 369.22 | 0.0 | 99.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20542 | 0.20542 | 0.20542 | 0.0 | 0.06 Output | 0.00023735 | 0.00023735 | 0.00023735 | 0.0 | 0.00 Modify | 1.3699 | 1.3699 | 1.3699 | 0.0 | 0.37 Other | | 0.1622 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 381106 ave 381106 max 381106 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 381106 Ave neighs/atom = 47.63825 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.900930681169, Press = 3.07899996014959 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -36316.909 -36316.909 -36582.302 -36582.302 256.67848 256.67848 158721.56 158721.56 1161.9454 1161.9454 7000 -36315.93 -36315.93 -36576.694 -36576.694 252.20068 252.20068 158950.79 158950.79 -146.88021 -146.88021 Loop time of 370.894 on 1 procs for 1000 steps with 8000 atoms Performance: 0.233 ns/day, 103.026 hours/ns, 2.696 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 369.15 | 369.15 | 369.15 | 0.0 | 99.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20607 | 0.20607 | 0.20607 | 0.0 | 0.06 Output | 0.00024123 | 0.00024123 | 0.00024123 | 0.0 | 0.00 Modify | 1.375 | 1.375 | 1.375 | 0.0 | 0.37 Other | | 0.1623 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 381374 ave 381374 max 381374 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 381374 Ave neighs/atom = 47.67175 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.267159834024, Press = -5.38240218654737 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -36315.93 -36315.93 -36576.694 -36576.694 252.20068 252.20068 158950.79 158950.79 -146.88021 -146.88021 8000 -36313.38 -36313.38 -36578.461 -36578.461 256.37642 256.37642 159038.36 159038.36 -393.99773 -393.99773 Loop time of 370.412 on 1 procs for 1000 steps with 8000 atoms Performance: 0.233 ns/day, 102.892 hours/ns, 2.700 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 368.67 | 368.67 | 368.67 | 0.0 | 99.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20425 | 0.20425 | 0.20425 | 0.0 | 0.06 Output | 0.00023435 | 0.00023435 | 0.00023435 | 0.0 | 0.00 Modify | 1.3737 | 1.3737 | 1.3737 | 0.0 | 0.37 Other | | 0.1626 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 381018 ave 381018 max 381018 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 381018 Ave neighs/atom = 47.62725 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.08136329576, Press = 4.47342357631744 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -36313.38 -36313.38 -36578.461 -36578.461 256.37642 256.37642 159038.36 159038.36 -393.99773 -393.99773 9000 -36318.17 -36318.17 -36577.763 -36577.763 251.06874 251.06874 158928.19 158928.19 -80.350676 -80.350676 Loop time of 370.072 on 1 procs for 1000 steps with 8000 atoms Performance: 0.233 ns/day, 102.798 hours/ns, 2.702 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 368.33 | 368.33 | 368.33 | 0.0 | 99.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20496 | 0.20496 | 0.20496 | 0.0 | 0.06 Output | 0.00028052 | 0.00028052 | 0.00028052 | 0.0 | 0.00 Modify | 1.3766 | 1.3766 | 1.3766 | 0.0 | 0.37 Other | | 0.1623 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 380244 ave 380244 max 380244 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 380244 Ave neighs/atom = 47.5305 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.189651952095, Press = 1.47049183037607 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -36318.17 -36318.17 -36577.763 -36577.763 251.06874 251.06874 158928.19 158928.19 -80.350676 -80.350676 10000 -36311.977 -36311.977 -36573.85 -36573.85 253.27434 253.27434 158992.32 158992.32 -417.72053 -417.72053 Loop time of 370.326 on 1 procs for 1000 steps with 8000 atoms Performance: 0.233 ns/day, 102.868 hours/ns, 2.700 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 368.58 | 368.58 | 368.58 | 0.0 | 99.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20398 | 0.20398 | 0.20398 | 0.0 | 0.06 Output | 0.00023199 | 0.00023199 | 0.00023199 | 0.0 | 0.00 Modify | 1.3791 | 1.3791 | 1.3791 | 0.0 | 0.37 Other | | 0.1626 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 381136 ave 381136 max 381136 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 381136 Ave neighs/atom = 47.642 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.121890532646, Press = 3.54203973657852 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -36311.977 -36311.977 -36573.85 -36573.85 253.27434 253.27434 158992.32 158992.32 -417.72053 -417.72053 11000 -36318.374 -36318.374 -36576.707 -36576.707 249.85024 249.85024 158779.65 158779.65 662.35926 662.35926 Loop time of 372.283 on 1 procs for 1000 steps with 8000 atoms Performance: 0.232 ns/day, 103.412 hours/ns, 2.686 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 370.53 | 370.53 | 370.53 | 0.0 | 99.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20426 | 0.20426 | 0.20426 | 0.0 | 0.05 Output | 0.00027493 | 0.00027493 | 0.00027493 | 0.0 | 0.00 Modify | 1.3842 | 1.3842 | 1.3842 | 0.0 | 0.37 Other | | 0.1628 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 380798 ave 380798 max 380798 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 380798 Ave neighs/atom = 47.59975 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.133243462718, Press = 0.492861002781451 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -36318.374 -36318.374 -36576.707 -36576.707 249.85024 249.85024 158779.65 158779.65 662.35926 662.35926 12000 -36315.69 -36315.69 -36576.847 -36576.847 252.58091 252.58091 159024.03 159024.03 -559.99692 -559.99692 Loop time of 370.542 on 1 procs for 1000 steps with 8000 atoms Performance: 0.233 ns/day, 102.928 hours/ns, 2.699 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 368.79 | 368.79 | 368.79 | 0.0 | 99.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20705 | 0.20705 | 0.20705 | 0.0 | 0.06 Output | 0.00023573 | 0.00023573 | 0.00023573 | 0.0 | 0.00 Modify | 1.3786 | 1.3786 | 1.3786 | 0.0 | 0.37 Other | | 0.1635 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 381572 ave 381572 max 381572 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 381572 Ave neighs/atom = 47.6965 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.128229841188, Press = 0.811708711399029 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -36315.69 -36315.69 -36576.847 -36576.847 252.58091 252.58091 159024.03 159024.03 -559.99692 -559.99692 13000 -36315.745 -36315.745 -36578.234 -36578.234 253.86954 253.86954 158932.26 158932.26 -120.93298 -120.93298 Loop time of 372.37 on 1 procs for 1000 steps with 8000 atoms Performance: 0.232 ns/day, 103.436 hours/ns, 2.686 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 370.6 | 370.6 | 370.6 | 0.0 | 99.52 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20585 | 0.20585 | 0.20585 | 0.0 | 0.06 Output | 0.00027472 | 0.00027472 | 0.00027472 | 0.0 | 0.00 Modify | 1.401 | 1.401 | 1.401 | 0.0 | 0.38 Other | | 0.1642 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 380710 ave 380710 max 380710 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 380710 Ave neighs/atom = 47.58875 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.973850980613, Press = 1.06456014917676 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -36315.745 -36315.745 -36578.234 -36578.234 253.86954 253.86954 158932.26 158932.26 -120.93298 -120.93298 14000 -36320.015 -36320.015 -36578.497 -36578.497 249.99376 249.99376 158943.4 158943.4 -293.8066 -293.8066 Loop time of 372.233 on 1 procs for 1000 steps with 8000 atoms Performance: 0.232 ns/day, 103.398 hours/ns, 2.686 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 370.47 | 370.47 | 370.47 | 0.0 | 99.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20636 | 0.20636 | 0.20636 | 0.0 | 0.06 Output | 0.00023437 | 0.00023437 | 0.00023437 | 0.0 | 0.00 Modify | 1.3905 | 1.3905 | 1.3905 | 0.0 | 0.37 Other | | 0.1631 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 381110 ave 381110 max 381110 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 381110 Ave neighs/atom = 47.63875 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.944156225098, Press = 2.62610276622148 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -36320.015 -36320.015 -36578.497 -36578.497 249.99376 249.99376 158943.4 158943.4 -293.8066 -293.8066 15000 -36319.502 -36319.502 -36578.003 -36578.003 250.01324 250.01324 158753.58 158753.58 558.22022 558.22022 Loop time of 373.276 on 1 procs for 1000 steps with 8000 atoms Performance: 0.231 ns/day, 103.688 hours/ns, 2.679 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 371.51 | 371.51 | 371.51 | 0.0 | 99.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20756 | 0.20756 | 0.20756 | 0.0 | 0.06 Output | 0.00023922 | 0.00023922 | 0.00023922 | 0.0 | 0.00 Modify | 1.3939 | 1.3939 | 1.3939 | 0.0 | 0.37 Other | | 0.1641 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 381540 ave 381540 max 381540 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 381540 Ave neighs/atom = 47.6925 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.82940890884, Press = 1.48226265195067 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -36319.502 -36319.502 -36578.003 -36578.003 250.01324 250.01324 158753.58 158753.58 558.22022 558.22022 16000 -36312.546 -36312.546 -36574.648 -36574.648 253.49512 253.49512 158781.28 158781.28 429.19051 429.19051 Loop time of 372.917 on 1 procs for 1000 steps with 8000 atoms Performance: 0.232 ns/day, 103.588 hours/ns, 2.682 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 371.16 | 371.16 | 371.16 | 0.0 | 99.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20619 | 0.20619 | 0.20619 | 0.0 | 0.06 Output | 0.00027959 | 0.00027959 | 0.00027959 | 0.0 | 0.00 Modify | 1.3913 | 1.3913 | 1.3913 | 0.0 | 0.37 Other | | 0.1646 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6727 ave 6727 max 6727 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 382120 ave 382120 max 382120 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 382120 Ave neighs/atom = 47.765 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.794065490985, Press = 0.187681326920107 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -36312.546 -36312.546 -36574.648 -36574.648 253.49512 253.49512 158781.28 158781.28 429.19051 429.19051 17000 -36319.217 -36319.217 -36578.903 -36578.903 251.15846 251.15846 158986.25 158986.25 -553.75123 -553.75123 Loop time of 372.117 on 1 procs for 1000 steps with 8000 atoms Performance: 0.232 ns/day, 103.366 hours/ns, 2.687 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 370.37 | 370.37 | 370.37 | 0.0 | 99.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20634 | 0.20634 | 0.20634 | 0.0 | 0.06 Output | 0.00023559 | 0.00023559 | 0.00023559 | 0.0 | 0.00 Modify | 1.38 | 1.38 | 1.38 | 0.0 | 0.37 Other | | 0.1637 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 382126 ave 382126 max 382126 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 382126 Ave neighs/atom = 47.76575 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.776340466585, Press = 1.3881495864661 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -36319.217 -36319.217 -36578.903 -36578.903 251.15846 251.15846 158986.25 158986.25 -553.75123 -553.75123 18000 -36310.258 -36310.258 -36574.728 -36574.728 255.78553 255.78553 158849.43 158849.43 226.35992 226.35992 Loop time of 371.671 on 1 procs for 1000 steps with 8000 atoms Performance: 0.232 ns/day, 103.242 hours/ns, 2.691 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 369.93 | 369.93 | 369.93 | 0.0 | 99.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2056 | 0.2056 | 0.2056 | 0.0 | 0.06 Output | 0.00028167 | 0.00028167 | 0.00028167 | 0.0 | 0.00 Modify | 1.3697 | 1.3697 | 1.3697 | 0.0 | 0.37 Other | | 0.163 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 381386 ave 381386 max 381386 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 381386 Ave neighs/atom = 47.67325 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.859754627756, Press = 1.16671928589686 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -36310.258 -36310.258 -36574.728 -36574.728 255.78553 255.78553 158849.43 158849.43 226.35992 226.35992 19000 -36317.161 -36317.161 -36579.615 -36579.615 253.83644 253.83644 158871.34 158871.34 243.04779 243.04779 Loop time of 371.987 on 1 procs for 1000 steps with 8000 atoms Performance: 0.232 ns/day, 103.330 hours/ns, 2.688 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 370.24 | 370.24 | 370.24 | 0.0 | 99.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20612 | 0.20612 | 0.20612 | 0.0 | 0.06 Output | 0.00028019 | 0.00028019 | 0.00028019 | 0.0 | 0.00 Modify | 1.382 | 1.382 | 1.382 | 0.0 | 0.37 Other | | 0.1625 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 381864 ave 381864 max 381864 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 381864 Ave neighs/atom = 47.733 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.986972483063, Press = -0.527452652145895 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -36317.161 -36317.161 -36579.615 -36579.615 253.83644 253.83644 158871.34 158871.34 243.04779 243.04779 20000 -36315.606 -36315.606 -36574.753 -36574.753 250.63734 250.63734 158882.27 158882.27 34.175827 34.175827 Loop time of 369.917 on 1 procs for 1000 steps with 8000 atoms Performance: 0.234 ns/day, 102.755 hours/ns, 2.703 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 368.19 | 368.19 | 368.19 | 0.0 | 99.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20355 | 0.20355 | 0.20355 | 0.0 | 0.06 Output | 0.00023218 | 0.00023218 | 0.00023218 | 0.0 | 0.00 Modify | 1.3632 | 1.3632 | 1.3632 | 0.0 | 0.37 Other | | 0.1625 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 381152 ave 381152 max 381152 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 381152 Ave neighs/atom = 47.644 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.009806828091, Press = -0.224477282008315 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -36315.606 -36315.606 -36574.753 -36574.753 250.63734 250.63734 158882.27 158882.27 34.175827 34.175827 21000 -36318.359 -36318.359 -36583.185 -36583.185 256.12998 256.12998 159004.49 159004.49 -212.65764 -212.65764 Loop time of 370.659 on 1 procs for 1000 steps with 8000 atoms Performance: 0.233 ns/day, 102.961 hours/ns, 2.698 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 368.91 | 368.91 | 368.91 | 0.0 | 99.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20613 | 0.20613 | 0.20613 | 0.0 | 0.06 Output | 0.00022972 | 0.00022972 | 0.00022972 | 0.0 | 0.00 Modify | 1.3777 | 1.3777 | 1.3777 | 0.0 | 0.37 Other | | 0.1625 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 381594 ave 381594 max 381594 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 381594 Ave neighs/atom = 47.69925 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.019896168115, Press = 1.01563789098989 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -36318.359 -36318.359 -36583.185 -36583.185 256.12998 256.12998 159004.49 159004.49 -212.65764 -212.65764 22000 -36315.294 -36315.294 -36576.275 -36576.275 252.41088 252.41088 158792.84 158792.84 413.51526 413.51526 Loop time of 371.845 on 1 procs for 1000 steps with 8000 atoms Performance: 0.232 ns/day, 103.290 hours/ns, 2.689 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 370.09 | 370.09 | 370.09 | 0.0 | 99.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20773 | 0.20773 | 0.20773 | 0.0 | 0.06 Output | 0.00039229 | 0.00039229 | 0.00039229 | 0.0 | 0.00 Modify | 1.3816 | 1.3816 | 1.3816 | 0.0 | 0.37 Other | | 0.1624 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 379900 ave 379900 max 379900 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 379900 Ave neighs/atom = 47.4875 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.007085272955, Press = 1.46884332965172 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -36315.294 -36315.294 -36576.275 -36576.275 252.41088 252.41088 158792.84 158792.84 413.51526 413.51526 23000 -36322.846 -36322.846 -36583.188 -36583.188 251.79384 251.79384 158979.24 158979.24 -132.27213 -132.27213 Loop time of 370.164 on 1 procs for 1000 steps with 8000 atoms Performance: 0.233 ns/day, 102.823 hours/ns, 2.702 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 368.44 | 368.44 | 368.44 | 0.0 | 99.53 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2049 | 0.2049 | 0.2049 | 0.0 | 0.06 Output | 0.00023348 | 0.00023348 | 0.00023348 | 0.0 | 0.00 Modify | 1.3568 | 1.3568 | 1.3568 | 0.0 | 0.37 Other | | 0.1615 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 382152 ave 382152 max 382152 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 382152 Ave neighs/atom = 47.769 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 158905.463585793 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0