# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.4223007559776315*${_u_distance} variable latticeconst_converted equal 5.4223007559776315*1 lattice diamond ${latticeconst_converted} lattice diamond 5.42230075597763 Lattice spacing in x,y,z = 5.4223008 5.4223008 5.4223008 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (54.223008 54.223008 54.223008) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms create_atoms CPU = 0.001 seconds variable mass_converted equal 28.0855*${_u_mass} variable mass_converted equal 28.0855*1 kim_interactions Si #=== BEGIN kim_interactions ================================== pair_style kim MEAM_LAMMPS_CuiGaoCui_2012_LiSi__MO_557492625287_000 pair_coeff * * Si #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 28.0855 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 159422.937867836 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 159422.937867836/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 159422.937867836/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 159422.937867836/(1*1*${_u_distance}) variable V0_metal equal 159422.937867836/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 159422.937867836*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 159422.937867836 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.894 | 7.894 | 7.894 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -36768.337 -36768.337 -37030.082 -37030.082 253.15 253.15 159422.94 159422.94 1753.6539 1753.6539 1000 -36483.605 -36483.605 -36781.953 -36781.953 288.55083 288.55083 160611.97 160611.97 -1562.9124 -1562.9124 Loop time of 203.794 on 1 procs for 1000 steps with 8000 atoms Performance: 0.424 ns/day, 56.610 hours/ns, 4.907 timesteps/s 83.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 203.32 | 203.32 | 203.32 | 0.0 | 99.77 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.099182 | 0.099182 | 0.099182 | 0.0 | 0.05 Output | 6.25e-05 | 6.25e-05 | 6.25e-05 | 0.0 | 0.00 Modify | 0.34555 | 0.34555 | 0.34555 | 0.0 | 0.17 Other | | 0.0336 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 560000.0 ave 560000 max 560000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 560000 Ave neighs/atom = 70.000000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.894 | 7.894 | 7.894 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -36483.605 -36483.605 -36781.953 -36781.953 288.55083 288.55083 160611.97 160611.97 -1562.9124 -1562.9124 2000 -36511.48 -36511.48 -36768.868 -36768.868 248.93575 248.93575 160299.22 160299.22 667.8775 667.8775 Loop time of 206.084 on 1 procs for 1000 steps with 8000 atoms Performance: 0.419 ns/day, 57.245 hours/ns, 4.852 timesteps/s 83.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 205.63 | 205.63 | 205.63 | 0.0 | 99.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.054412 | 0.054412 | 0.054412 | 0.0 | 0.03 Output | 5.95e-05 | 5.95e-05 | 5.95e-05 | 0.0 | 0.00 Modify | 0.34367 | 0.34367 | 0.34367 | 0.0 | 0.17 Other | | 0.05328 | | | 0.03 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7661.00 ave 7661 max 7661 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555150.0 ave 555150 max 555150 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555150 Ave neighs/atom = 69.393750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.894 | 7.894 | 7.894 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -36511.48 -36511.48 -36768.868 -36768.868 248.93575 248.93575 160299.22 160299.22 667.8775 667.8775 3000 -36497.802 -36497.802 -36761.655 -36761.655 255.18809 255.18809 160501.78 160501.78 -365.52359 -365.52359 Loop time of 207.122 on 1 procs for 1000 steps with 8000 atoms Performance: 0.417 ns/day, 57.534 hours/ns, 4.828 timesteps/s 83.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 206.63 | 206.63 | 206.63 | 0.0 | 99.76 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.054124 | 0.054124 | 0.054124 | 0.0 | 0.03 Output | 5.95e-05 | 5.95e-05 | 5.95e-05 | 0.0 | 0.00 Modify | 0.36347 | 0.36347 | 0.36347 | 0.0 | 0.18 Other | | 0.07322 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7810.00 ave 7810 max 7810 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555628.0 ave 555628 max 555628 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555628 Ave neighs/atom = 69.453500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.894 | 7.894 | 7.894 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -36497.802 -36497.802 -36761.655 -36761.655 255.18809 255.18809 160501.78 160501.78 -365.52359 -365.52359 4000 -36505.162 -36505.162 -36764.819 -36764.819 251.13037 251.13037 160388.36 160388.36 67.697502 67.697502 Loop time of 204.625 on 1 procs for 1000 steps with 8000 atoms Performance: 0.422 ns/day, 56.840 hours/ns, 4.887 timesteps/s 84.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 204.2 | 204.2 | 204.2 | 0.0 | 99.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.054348 | 0.054348 | 0.054348 | 0.0 | 0.03 Output | 5.96e-05 | 5.96e-05 | 5.96e-05 | 0.0 | 0.00 Modify | 0.33501 | 0.33501 | 0.33501 | 0.0 | 0.16 Other | | 0.03324 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7729.00 ave 7729 max 7729 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 554892.0 ave 554892 max 554892 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 554892 Ave neighs/atom = 69.361500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.894 | 7.894 | 7.894 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -36505.162 -36505.162 -36764.819 -36764.819 251.13037 251.13037 160388.36 160388.36 67.697502 67.697502 5000 -36503.792 -36503.792 -36765.02 -36765.02 252.65009 252.65009 160418.85 160418.85 27.038791 27.038791 Loop time of 204.145 on 1 procs for 1000 steps with 8000 atoms Performance: 0.423 ns/day, 56.707 hours/ns, 4.898 timesteps/s 84.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 203.75 | 203.75 | 203.75 | 0.0 | 99.80 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.062675 | 0.062675 | 0.062675 | 0.0 | 0.03 Output | 3.81e-05 | 3.81e-05 | 3.81e-05 | 0.0 | 0.00 Modify | 0.30458 | 0.30458 | 0.30458 | 0.0 | 0.15 Other | | 0.03281 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7773.00 ave 7773 max 7773 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555092.0 ave 555092 max 555092 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555092 Ave neighs/atom = 69.386500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.699665255887, Press = 52.8581904196935 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.894 | 7.894 | 7.894 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -36503.792 -36503.792 -36765.02 -36765.02 252.65009 252.65009 160418.85 160418.85 27.038791 27.038791 6000 -36499.996 -36499.996 -36758.894 -36758.894 250.39588 250.39588 160410.96 160410.96 2.7816809 2.7816809 Loop time of 202.473 on 1 procs for 1000 steps with 8000 atoms Performance: 0.427 ns/day, 56.243 hours/ns, 4.939 timesteps/s 85.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 202 | 202 | 202 | 0.0 | 99.77 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.075394 | 0.075394 | 0.075394 | 0.0 | 0.04 Output | 4.67e-05 | 4.67e-05 | 4.67e-05 | 0.0 | 0.00 Modify | 0.36389 | 0.36389 | 0.36389 | 0.0 | 0.18 Other | | 0.03331 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7770.00 ave 7770 max 7770 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555302.0 ave 555302 max 555302 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555302 Ave neighs/atom = 69.412750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.70100337522, Press = -3.95940820351695 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.894 | 7.894 | 7.894 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -36499.996 -36499.996 -36758.894 -36758.894 250.39588 250.39588 160410.96 160410.96 2.7816809 2.7816809 7000 -36505.782 -36505.782 -36771.297 -36771.297 256.79595 256.79595 160492.04 160492.04 -443.66624 -443.66624 Loop time of 209.59 on 1 procs for 1000 steps with 8000 atoms Performance: 0.412 ns/day, 58.220 hours/ns, 4.771 timesteps/s 83.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 209.09 | 209.09 | 209.09 | 0.0 | 99.76 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.055186 | 0.055186 | 0.055186 | 0.0 | 0.03 Output | 4.22e-05 | 4.22e-05 | 4.22e-05 | 0.0 | 0.00 Modify | 0.41209 | 0.41209 | 0.41209 | 0.0 | 0.20 Other | | 0.0333 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7807.00 ave 7807 max 7807 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 554872.0 ave 554872 max 554872 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 554872 Ave neighs/atom = 69.359000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.103480768122, Press = 4.7687387448144 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.894 | 7.894 | 7.894 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -36505.782 -36505.782 -36771.297 -36771.297 256.79595 256.79595 160492.04 160492.04 -443.66624 -443.66624 8000 -36497.859 -36497.859 -36762.565 -36762.565 256.01375 256.01375 160300.17 160300.17 962.88084 962.88084 Loop time of 209.597 on 1 procs for 1000 steps with 8000 atoms Performance: 0.412 ns/day, 58.221 hours/ns, 4.771 timesteps/s 82.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 209.08 | 209.08 | 209.08 | 0.0 | 99.75 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.094932 | 0.094932 | 0.094932 | 0.0 | 0.05 Output | 4.74e-05 | 4.74e-05 | 4.74e-05 | 0.0 | 0.00 Modify | 0.37025 | 0.37025 | 0.37025 | 0.0 | 0.18 Other | | 0.05313 | | | 0.03 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7778.00 ave 7778 max 7778 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555896.0 ave 555896 max 555896 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555896 Ave neighs/atom = 69.487000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.053949138222, Press = -0.480113659981116 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.894 | 7.894 | 7.894 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -36497.859 -36497.859 -36762.565 -36762.565 256.01375 256.01375 160300.17 160300.17 962.88084 962.88084 9000 -36505.855 -36505.855 -36764.59 -36764.59 250.2389 250.2389 160555.92 160555.92 -855.04 -855.04 Loop time of 205.487 on 1 procs for 1000 steps with 8000 atoms Performance: 0.420 ns/day, 57.080 hours/ns, 4.866 timesteps/s 84.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 205.05 | 205.05 | 205.05 | 0.0 | 99.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.05503 | 0.05503 | 0.05503 | 0.0 | 0.03 Output | 8.63e-05 | 8.63e-05 | 8.63e-05 | 0.0 | 0.00 Modify | 0.34576 | 0.34576 | 0.34576 | 0.0 | 0.17 Other | | 0.03314 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7780.00 ave 7780 max 7780 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555608.0 ave 555608 max 555608 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555608 Ave neighs/atom = 69.451000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.079918677479, Press = 0.279989486060852 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.894 | 7.894 | 7.894 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -36505.855 -36505.855 -36764.59 -36764.59 250.2389 250.2389 160555.92 160555.92 -855.04 -855.04 10000 -36500.67 -36500.67 -36757.73 -36757.73 248.61922 248.61922 160378.82 160378.82 249.45775 249.45775 Loop time of 206.194 on 1 procs for 1000 steps with 8000 atoms Performance: 0.419 ns/day, 57.276 hours/ns, 4.850 timesteps/s 84.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 205.65 | 205.65 | 205.65 | 0.0 | 99.74 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.053898 | 0.053898 | 0.053898 | 0.0 | 0.03 Output | 4.64e-05 | 4.64e-05 | 4.64e-05 | 0.0 | 0.00 Modify | 0.39193 | 0.39193 | 0.39193 | 0.0 | 0.19 Other | | 0.09313 | | | 0.05 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7719.00 ave 7719 max 7719 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 554840.0 ave 554840 max 554840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 554840 Ave neighs/atom = 69.355000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.143852293821, Press = 0.833321259972472 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.894 | 7.894 | 7.894 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -36500.67 -36500.67 -36757.73 -36757.73 248.61922 248.61922 160378.82 160378.82 249.45775 249.45775 11000 -36500.343 -36500.343 -36766.365 -36766.365 257.28641 257.28641 160485.54 160485.54 -394.25989 -394.25989 Loop time of 202.795 on 1 procs for 1000 steps with 8000 atoms Performance: 0.426 ns/day, 56.332 hours/ns, 4.931 timesteps/s 85.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 202.28 | 202.28 | 202.28 | 0.0 | 99.74 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.054452 | 0.054452 | 0.054452 | 0.0 | 0.03 Output | 3.85e-05 | 3.85e-05 | 3.85e-05 | 0.0 | 0.00 Modify | 0.39134 | 0.39134 | 0.39134 | 0.0 | 0.19 Other | | 0.07328 | | | 0.04 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7722.00 ave 7722 max 7722 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555006.0 ave 555006 max 555006 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555006 Ave neighs/atom = 69.375750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.183016619085, Press = 0.300939716961098 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -36500.343 -36500.343 -36766.365 -36766.365 257.28641 257.28641 160485.54 160485.54 -394.25989 -394.25989 12000 -36505.034 -36505.034 -36760.56 -36760.56 247.13546 247.13546 160370.24 160370.24 312.03708 312.03708 Loop time of 209.324 on 1 procs for 1000 steps with 8000 atoms Performance: 0.413 ns/day, 58.146 hours/ns, 4.777 timesteps/s 83.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 208.79 | 208.79 | 208.79 | 0.0 | 99.75 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.054988 | 0.054988 | 0.054988 | 0.0 | 0.03 Output | 4.62e-05 | 4.62e-05 | 4.62e-05 | 0.0 | 0.00 Modify | 0.44041 | 0.44041 | 0.44041 | 0.0 | 0.21 Other | | 0.03355 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7738.00 ave 7738 max 7738 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555250.0 ave 555250 max 555250 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555250 Ave neighs/atom = 69.406250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.336169022867, Press = -0.422375248374333 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -36505.034 -36505.034 -36760.56 -36760.56 247.13546 247.13546 160370.24 160370.24 312.03708 312.03708 13000 -36498.202 -36498.202 -36758.88 -36758.88 252.11837 252.11837 160475.72 160475.72 -218.16253 -218.16253 Loop time of 205.125 on 1 procs for 1000 steps with 8000 atoms Performance: 0.421 ns/day, 56.979 hours/ns, 4.875 timesteps/s 84.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 204.68 | 204.68 | 204.68 | 0.0 | 99.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.055492 | 0.055492 | 0.055492 | 0.0 | 0.03 Output | 4.61e-05 | 4.61e-05 | 4.61e-05 | 0.0 | 0.00 Modify | 0.35198 | 0.35198 | 0.35198 | 0.0 | 0.17 Other | | 0.03327 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7726.00 ave 7726 max 7726 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555412.0 ave 555412 max 555412 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555412 Ave neighs/atom = 69.426500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.367289890084, Press = 1.05413674396106 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -36498.202 -36498.202 -36758.88 -36758.88 252.11837 252.11837 160475.72 160475.72 -218.16253 -218.16253 14000 -36503.597 -36503.597 -36758.945 -36758.945 246.96312 246.96312 160428.93 160428.93 -111.83946 -111.83946 Loop time of 205.477 on 1 procs for 1000 steps with 8000 atoms Performance: 0.420 ns/day, 57.077 hours/ns, 4.867 timesteps/s 84.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 205.04 | 205.04 | 205.04 | 0.0 | 99.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.054349 | 0.054349 | 0.054349 | 0.0 | 0.03 Output | 4.69e-05 | 4.69e-05 | 4.69e-05 | 0.0 | 0.00 Modify | 0.35405 | 0.35405 | 0.35405 | 0.0 | 0.17 Other | | 0.03321 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7733.00 ave 7733 max 7733 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 554812.0 ave 554812 max 554812 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 554812 Ave neighs/atom = 69.351500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.333091134329, Press = -1.26579311313658 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -36503.597 -36503.597 -36758.945 -36758.945 246.96312 246.96312 160428.93 160428.93 -111.83946 -111.83946 15000 -36504.28 -36504.28 -36765.738 -36765.738 252.87229 252.87229 160438.29 160438.29 -193.48381 -193.48381 Loop time of 206.771 on 1 procs for 1000 steps with 8000 atoms Performance: 0.418 ns/day, 57.436 hours/ns, 4.836 timesteps/s 84.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 206.34 | 206.34 | 206.34 | 0.0 | 99.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.055462 | 0.055462 | 0.055462 | 0.0 | 0.03 Output | 4.61e-05 | 4.61e-05 | 4.61e-05 | 0.0 | 0.00 Modify | 0.33742 | 0.33742 | 0.33742 | 0.0 | 0.16 Other | | 0.03337 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7723.00 ave 7723 max 7723 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 554678.0 ave 554678 max 554678 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 554678 Ave neighs/atom = 69.334750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.309788204933, Press = 1.77240608155261 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -36504.28 -36504.28 -36765.738 -36765.738 252.87229 252.87229 160438.29 160438.29 -193.48381 -193.48381 16000 -36503.236 -36503.236 -36765.163 -36765.163 253.3261 253.3261 160411.29 160411.29 -13.441769 -13.441769 Loop time of 201.27 on 1 procs for 1000 steps with 8000 atoms Performance: 0.429 ns/day, 55.908 hours/ns, 4.968 timesteps/s 86.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 200.81 | 200.81 | 200.81 | 0.0 | 99.77 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.076785 | 0.076785 | 0.076785 | 0.0 | 0.04 Output | 4.83e-05 | 4.83e-05 | 4.83e-05 | 0.0 | 0.00 Modify | 0.35331 | 0.35331 | 0.35331 | 0.0 | 0.18 Other | | 0.03314 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7660.00 ave 7660 max 7660 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555074.0 ave 555074 max 555074 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555074 Ave neighs/atom = 69.384250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.24028179934, Press = -1.54421452878546 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -36503.236 -36503.236 -36765.163 -36765.163 253.3261 253.3261 160411.29 160411.29 -13.441769 -13.441769 17000 -36501.027 -36501.027 -36763.421 -36763.421 253.77796 253.77796 160484.6 160484.6 -360.79585 -360.79585 Loop time of 192.494 on 1 procs for 1000 steps with 8000 atoms Performance: 0.449 ns/day, 53.470 hours/ns, 5.195 timesteps/s 90.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 192.04 | 192.04 | 192.04 | 0.0 | 99.76 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.05445 | 0.05445 | 0.05445 | 0.0 | 0.03 Output | 5.7e-05 | 5.7e-05 | 5.7e-05 | 0.0 | 0.00 Modify | 0.3469 | 0.3469 | 0.3469 | 0.0 | 0.18 Other | | 0.05343 | | | 0.03 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7677.00 ave 7677 max 7677 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555166.0 ave 555166 max 555166 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555166 Ave neighs/atom = 69.395750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.287375312717, Press = 1.58277226097447 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -36501.027 -36501.027 -36763.421 -36763.421 253.77796 253.77796 160484.6 160484.6 -360.79585 -360.79585 18000 -36497.615 -36497.615 -36759.975 -36759.975 253.74512 253.74512 160382.11 160382.11 318.7891 318.7891 Loop time of 202.826 on 1 procs for 1000 steps with 8000 atoms Performance: 0.426 ns/day, 56.341 hours/ns, 4.930 timesteps/s 85.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 202.38 | 202.38 | 202.38 | 0.0 | 99.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.054252 | 0.054252 | 0.054252 | 0.0 | 0.03 Output | 4.72e-05 | 4.72e-05 | 4.72e-05 | 0.0 | 0.00 Modify | 0.35346 | 0.35346 | 0.35346 | 0.0 | 0.17 Other | | 0.03337 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7654.00 ave 7654 max 7654 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555194.0 ave 555194 max 555194 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555194 Ave neighs/atom = 69.399250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.321555491903, Press = -0.843604128266578 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -36497.615 -36497.615 -36759.975 -36759.975 253.74512 253.74512 160382.11 160382.11 318.7891 318.7891 19000 -36505.168 -36505.168 -36765.394 -36765.394 251.6813 251.6813 160443.97 160443.97 -130.19544 -130.19544 Loop time of 184.441 on 1 procs for 1000 steps with 8000 atoms Performance: 0.468 ns/day, 51.234 hours/ns, 5.422 timesteps/s 93.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 184.02 | 184.02 | 184.02 | 0.0 | 99.77 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.053855 | 0.053855 | 0.053855 | 0.0 | 0.03 Output | 6.23e-05 | 6.23e-05 | 6.23e-05 | 0.0 | 0.00 Modify | 0.33498 | 0.33498 | 0.33498 | 0.0 | 0.18 Other | | 0.03287 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7744.00 ave 7744 max 7744 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555102.0 ave 555102 max 555102 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555102 Ave neighs/atom = 69.387750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.378455404084, Press = 0.865409241863949 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -36505.168 -36505.168 -36765.394 -36765.394 251.6813 251.6813 160443.97 160443.97 -130.19544 -130.19544 20000 -36502.602 -36502.602 -36762.957 -36762.957 251.80569 251.80569 160441.07 160441.07 -72.965866 -72.965866 Loop time of 184.862 on 1 procs for 1000 steps with 8000 atoms Performance: 0.467 ns/day, 51.351 hours/ns, 5.409 timesteps/s 94.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 184.4 | 184.4 | 184.4 | 0.0 | 99.75 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.074077 | 0.074077 | 0.074077 | 0.0 | 0.04 Output | 4.48e-05 | 4.48e-05 | 4.48e-05 | 0.0 | 0.00 Modify | 0.35078 | 0.35078 | 0.35078 | 0.0 | 0.19 Other | | 0.0333 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7638.00 ave 7638 max 7638 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555392.0 ave 555392 max 555392 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555392 Ave neighs/atom = 69.424000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.36088073838, Press = -0.207980614763846 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -36502.602 -36502.602 -36762.957 -36762.957 251.80569 251.80569 160441.07 160441.07 -72.965866 -72.965866 21000 -36502.652 -36502.652 -36762.164 -36762.164 250.99086 250.99086 160399.39 160399.39 164.15307 164.15307 Loop time of 184.534 on 1 procs for 1000 steps with 8000 atoms Performance: 0.468 ns/day, 51.260 hours/ns, 5.419 timesteps/s 94.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 184.11 | 184.11 | 184.11 | 0.0 | 99.77 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.07415 | 0.07415 | 0.07415 | 0.0 | 0.04 Output | 7.11e-05 | 7.11e-05 | 7.11e-05 | 0.0 | 0.00 Modify | 0.31135 | 0.31135 | 0.31135 | 0.0 | 0.17 Other | | 0.0342 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7721.00 ave 7721 max 7721 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555260.0 ave 555260 max 555260 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555260 Ave neighs/atom = 69.407500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.311220151954, Press = 0.216986415534308 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -36502.652 -36502.652 -36762.164 -36762.164 250.99086 250.99086 160399.39 160399.39 164.15307 164.15307 22000 -36505.065 -36505.065 -36763.913 -36763.913 250.34759 250.34759 160482.57 160482.57 -373.96866 -373.96866 Loop time of 186.825 on 1 procs for 1000 steps with 8000 atoms Performance: 0.462 ns/day, 51.896 hours/ns, 5.353 timesteps/s 92.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 186.35 | 186.35 | 186.35 | 0.0 | 99.74 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.071795 | 0.071795 | 0.071795 | 0.0 | 0.04 Output | 0.0034422 | 0.0034422 | 0.0034422 | 0.0 | 0.00 Modify | 0.37113 | 0.37113 | 0.37113 | 0.0 | 0.20 Other | | 0.03311 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7696.00 ave 7696 max 7696 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 554958.0 ave 554958 max 554958 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 554958 Ave neighs/atom = 69.369750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 160423.711162185 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0