# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.4223007559776315*${_u_distance} variable latticeconst_converted equal 5.4223007559776315*1 lattice diamond ${latticeconst_converted} lattice diamond 5.42230075597763 Lattice spacing in x,y,z = 5.4223008 5.4223008 5.4223008 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (54.223008 54.223008 54.223008) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms create_atoms CPU = 0.001 seconds variable mass_converted equal 28.0855*${_u_mass} variable mass_converted equal 28.0855*1 kim_interactions Si #=== BEGIN kim_interactions ================================== pair_style kim MEAM_LAMMPS_CuiGaoCui_2012_LiSi__MO_557492625287_000 pair_coeff * * Si #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 28.0855 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 159422.937867836 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 159422.937867836/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 159422.937867836/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 159422.937867836/(1*1*${_u_distance}) variable V0_metal equal 159422.937867836/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 159422.937867836*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 159422.937867836 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.894 | 7.894 | 7.894 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -36706.3 -36706.3 -37030.082 -37030.082 313.15 313.15 159422.94 159422.94 2169.2963 2169.2963 1000 -36352.793 -36352.793 -36706.299 -36706.299 341.89807 341.89807 160610.41 160610.41 303.96895 303.96895 Loop time of 202.526 on 1 procs for 1000 steps with 8000 atoms Performance: 0.427 ns/day, 56.257 hours/ns, 4.938 timesteps/s 84.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 202.09 | 202.09 | 202.09 | 0.0 | 99.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.060299 | 0.060299 | 0.060299 | 0.0 | 0.03 Output | 6.27e-05 | 6.27e-05 | 6.27e-05 | 0.0 | 0.00 Modify | 0.34469 | 0.34469 | 0.34469 | 0.0 | 0.17 Other | | 0.03353 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601.00 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 560000.0 ave 560000 max 560000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 560000 Ave neighs/atom = 70.000000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.894 | 7.894 | 7.894 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -36352.793 -36352.793 -36706.299 -36706.299 341.89807 341.89807 160610.41 160610.41 303.96895 303.96895 2000 -36387.702 -36387.702 -36706.941 -36706.941 308.75595 308.75595 160643.13 160643.13 99.465575 99.465575 Loop time of 204.004 on 1 procs for 1000 steps with 8000 atoms Performance: 0.424 ns/day, 56.668 hours/ns, 4.902 timesteps/s 84.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 203.59 | 203.59 | 203.59 | 0.0 | 99.80 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.053429 | 0.053429 | 0.053429 | 0.0 | 0.03 Output | 5.97e-05 | 5.97e-05 | 5.97e-05 | 0.0 | 0.00 Modify | 0.32448 | 0.32448 | 0.32448 | 0.0 | 0.16 Other | | 0.03329 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7654.00 ave 7654 max 7654 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 552342.0 ave 552342 max 552342 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 552342 Ave neighs/atom = 69.042750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.894 | 7.894 | 7.894 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -36387.702 -36387.702 -36706.941 -36706.941 308.75595 308.75595 160643.13 160643.13 99.465575 99.465575 3000 -36370.032 -36370.032 -36699.962 -36699.962 319.09607 319.09607 160711.44 160711.44 -147.39365 -147.39365 Loop time of 208.528 on 1 procs for 1000 steps with 8000 atoms Performance: 0.414 ns/day, 57.924 hours/ns, 4.796 timesteps/s 82.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 208.02 | 208.02 | 208.02 | 0.0 | 99.75 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.053411 | 0.053411 | 0.053411 | 0.0 | 0.03 Output | 5.04e-05 | 5.04e-05 | 5.04e-05 | 0.0 | 0.00 Modify | 0.42513 | 0.42513 | 0.42513 | 0.0 | 0.20 Other | | 0.03312 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7777.00 ave 7777 max 7777 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 552320.0 ave 552320 max 552320 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 552320 Ave neighs/atom = 69.040000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.894 | 7.894 | 7.894 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -36370.032 -36370.032 -36699.962 -36699.962 319.09607 319.09607 160711.44 160711.44 -147.39365 -147.39365 4000 -36380.107 -36380.107 -36694.253 -36694.253 303.83057 303.83057 160680.4 160680.4 -116.84918 -116.84918 Loop time of 203.015 on 1 procs for 1000 steps with 8000 atoms Performance: 0.426 ns/day, 56.393 hours/ns, 4.926 timesteps/s 84.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 202.5 | 202.5 | 202.5 | 0.0 | 99.75 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.073176 | 0.073176 | 0.073176 | 0.0 | 0.04 Output | 5.91e-05 | 5.91e-05 | 5.91e-05 | 0.0 | 0.00 Modify | 0.40601 | 0.40601 | 0.40601 | 0.0 | 0.20 Other | | 0.0328 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7660.00 ave 7660 max 7660 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 551778.0 ave 551778 max 551778 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 551778 Ave neighs/atom = 68.972250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.894 | 7.894 | 7.894 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -36380.107 -36380.107 -36694.253 -36694.253 303.83057 303.83057 160680.4 160680.4 -116.84918 -116.84918 5000 -36377.505 -36377.505 -36705.591 -36705.591 317.31238 317.31238 160598.65 160598.65 316.42243 316.42243 Loop time of 201.123 on 1 procs for 1000 steps with 8000 atoms Performance: 0.430 ns/day, 55.867 hours/ns, 4.972 timesteps/s 85.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 200.64 | 200.64 | 200.64 | 0.0 | 99.76 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.053521 | 0.053521 | 0.053521 | 0.0 | 0.03 Output | 4.46e-05 | 4.46e-05 | 4.46e-05 | 0.0 | 0.00 Modify | 0.39714 | 0.39714 | 0.39714 | 0.0 | 0.20 Other | | 0.03322 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7735.00 ave 7735 max 7735 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 551212.0 ave 551212 max 551212 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 551212 Ave neighs/atom = 68.901500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.137313608283, Press = 265.001880480549 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.894 | 7.894 | 7.894 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -36377.505 -36377.505 -36705.591 -36705.591 317.31238 317.31238 160598.65 160598.65 316.42243 316.42243 6000 -36373.593 -36373.593 -36693.613 -36693.613 309.51144 309.51144 160479.06 160479.06 1095.2778 1095.2778 Loop time of 202.633 on 1 procs for 1000 steps with 8000 atoms Performance: 0.426 ns/day, 56.287 hours/ns, 4.935 timesteps/s 85.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 202.19 | 202.19 | 202.19 | 0.0 | 99.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.054069 | 0.054069 | 0.054069 | 0.0 | 0.03 Output | 4.63e-05 | 4.63e-05 | 4.63e-05 | 0.0 | 0.00 Modify | 0.35796 | 0.35796 | 0.35796 | 0.0 | 0.18 Other | | 0.03378 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7760.00 ave 7760 max 7760 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 552320.0 ave 552320 max 552320 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 552320 Ave neighs/atom = 69.040000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.667319910481, Press = 17.002307589918 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -36373.593 -36373.593 -36693.613 -36693.613 309.51144 309.51144 160479.06 160479.06 1095.2778 1095.2778 7000 -36380.37 -36380.37 -36702.746 -36702.746 311.79 311.79 160547.49 160547.49 816.02313 816.02313 Loop time of 204.931 on 1 procs for 1000 steps with 8000 atoms Performance: 0.422 ns/day, 56.925 hours/ns, 4.880 timesteps/s 84.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 204.51 | 204.51 | 204.51 | 0.0 | 99.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.05406 | 0.05406 | 0.05406 | 0.0 | 0.03 Output | 4.7e-05 | 4.7e-05 | 4.7e-05 | 0.0 | 0.00 Modify | 0.33276 | 0.33276 | 0.33276 | 0.0 | 0.16 Other | | 0.0333 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7760.00 ave 7760 max 7760 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 552002.0 ave 552002 max 552002 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 552002 Ave neighs/atom = 69.000250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.01129188622, Press = -2.67689184687613 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -36380.37 -36380.37 -36702.746 -36702.746 311.79 311.79 160547.49 160547.49 816.02313 816.02313 8000 -36371.146 -36371.146 -36696.018 -36696.018 314.20477 314.20477 160694.32 160694.32 -139.23188 -139.23188 Loop time of 206.986 on 1 procs for 1000 steps with 8000 atoms Performance: 0.417 ns/day, 57.496 hours/ns, 4.831 timesteps/s 83.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 206.55 | 206.55 | 206.55 | 0.0 | 99.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.073566 | 0.073566 | 0.073566 | 0.0 | 0.04 Output | 3.66e-05 | 3.66e-05 | 3.66e-05 | 0.0 | 0.00 Modify | 0.33376 | 0.33376 | 0.33376 | 0.0 | 0.16 Other | | 0.03315 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7703.00 ave 7703 max 7703 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 552796.0 ave 552796 max 552796 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 552796 Ave neighs/atom = 69.099500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.015176868967, Press = -2.28817901622921 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -36371.146 -36371.146 -36696.018 -36696.018 314.20477 314.20477 160694.32 160694.32 -139.23188 -139.23188 9000 -36379.943 -36379.943 -36704.171 -36704.171 313.5809 313.5809 160703.45 160703.45 -163.36022 -163.36022 Loop time of 203.985 on 1 procs for 1000 steps with 8000 atoms Performance: 0.424 ns/day, 56.663 hours/ns, 4.902 timesteps/s 84.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 203.52 | 203.52 | 203.52 | 0.0 | 99.77 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.074676 | 0.074676 | 0.074676 | 0.0 | 0.04 Output | 4.64e-05 | 4.64e-05 | 4.64e-05 | 0.0 | 0.00 Modify | 0.3596 | 0.3596 | 0.3596 | 0.0 | 0.18 Other | | 0.03336 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7732.00 ave 7732 max 7732 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 551494.0 ave 551494 max 551494 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 551494 Ave neighs/atom = 68.936750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.063370086754, Press = -0.459104343585184 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -36379.943 -36379.943 -36704.171 -36704.171 313.5809 313.5809 160703.45 160703.45 -163.36022 -163.36022 10000 -36372.318 -36372.318 -36701.885 -36701.885 318.74553 318.74553 160756.25 160756.25 -419.13278 -419.13278 Loop time of 209.288 on 1 procs for 1000 steps with 8000 atoms Performance: 0.413 ns/day, 58.136 hours/ns, 4.778 timesteps/s 82.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 208.77 | 208.77 | 208.77 | 0.0 | 99.75 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.054457 | 0.054457 | 0.054457 | 0.0 | 0.03 Output | 4.61e-05 | 4.61e-05 | 4.61e-05 | 0.0 | 0.00 Modify | 0.4264 | 0.4264 | 0.4264 | 0.0 | 0.20 Other | | 0.03335 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7757.00 ave 7757 max 7757 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 552188.0 ave 552188 max 552188 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 552188 Ave neighs/atom = 69.023500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.119599690612, Press = 1.76527171815917 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -36372.318 -36372.318 -36701.885 -36701.885 318.74553 318.74553 160756.25 160756.25 -419.13278 -419.13278 11000 -36377.184 -36377.184 -36700.357 -36700.357 312.56096 312.56096 160762.02 160762.02 -619.87054 -619.87054 Loop time of 209.063 on 1 procs for 1000 steps with 8000 atoms Performance: 0.413 ns/day, 58.073 hours/ns, 4.783 timesteps/s 82.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 208.63 | 208.63 | 208.63 | 0.0 | 99.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.073368 | 0.073368 | 0.073368 | 0.0 | 0.04 Output | 3.73e-05 | 3.73e-05 | 3.73e-05 | 0.0 | 0.00 Modify | 0.33028 | 0.33028 | 0.33028 | 0.0 | 0.16 Other | | 0.03318 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7639.00 ave 7639 max 7639 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 552184.0 ave 552184 max 552184 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 552184 Ave neighs/atom = 69.023000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.22227019126, Press = 3.90732285949902 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -36377.184 -36377.184 -36700.357 -36700.357 312.56096 312.56096 160762.02 160762.02 -619.87054 -619.87054 12000 -36380.199 -36380.199 -36702.843 -36702.843 312.04893 312.04893 160587.95 160587.95 442.62876 442.62876 Loop time of 200.42 on 1 procs for 1000 steps with 8000 atoms Performance: 0.431 ns/day, 55.672 hours/ns, 4.990 timesteps/s 85.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 199.9 | 199.9 | 199.9 | 0.0 | 99.74 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.053741 | 0.053741 | 0.053741 | 0.0 | 0.03 Output | 3.88e-05 | 3.88e-05 | 3.88e-05 | 0.0 | 0.00 Modify | 0.39394 | 0.39394 | 0.39394 | 0.0 | 0.20 Other | | 0.06915 | | | 0.03 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7768.00 ave 7768 max 7768 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 551570.0 ave 551570 max 551570 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 551570 Ave neighs/atom = 68.946250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.378830755405, Press = 7.99374114990349 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -36380.199 -36380.199 -36702.843 -36702.843 312.04893 312.04893 160587.95 160587.95 442.62876 442.62876 13000 -36373.433 -36373.433 -36701.239 -36701.239 317.04241 317.04241 160519.89 160519.89 951.32679 951.32679 Loop time of 201.333 on 1 procs for 1000 steps with 8000 atoms Performance: 0.429 ns/day, 55.926 hours/ns, 4.967 timesteps/s 85.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 200.91 | 200.91 | 200.91 | 0.0 | 99.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.053585 | 0.053585 | 0.053585 | 0.0 | 0.03 Output | 3.77e-05 | 3.77e-05 | 3.77e-05 | 0.0 | 0.00 Modify | 0.3334 | 0.3334 | 0.3334 | 0.0 | 0.17 Other | | 0.03336 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7698.00 ave 7698 max 7698 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 552178.0 ave 552178 max 552178 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 552178 Ave neighs/atom = 69.022250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.298380965645, Press = 2.76478886749916 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -36373.433 -36373.433 -36701.239 -36701.239 317.04241 317.04241 160519.89 160519.89 951.32679 951.32679 14000 -36377.721 -36377.721 -36704.522 -36704.522 316.06973 316.06973 160545.67 160545.67 808.69908 808.69908 Loop time of 204.066 on 1 procs for 1000 steps with 8000 atoms Performance: 0.423 ns/day, 56.685 hours/ns, 4.900 timesteps/s 84.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 203.63 | 203.63 | 203.63 | 0.0 | 99.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.053674 | 0.053674 | 0.053674 | 0.0 | 0.03 Output | 4.58e-05 | 4.58e-05 | 4.58e-05 | 0.0 | 0.00 Modify | 0.34601 | 0.34601 | 0.34601 | 0.0 | 0.17 Other | | 0.03286 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7751.00 ave 7751 max 7751 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 552414.0 ave 552414 max 552414 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 552414 Ave neighs/atom = 69.051750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.391127419912, Press = -0.334914136798263 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -36377.721 -36377.721 -36704.522 -36704.522 316.06973 316.06973 160545.67 160545.67 808.69908 808.69908 15000 -36369.846 -36369.846 -36694.397 -36694.397 313.89375 313.89375 160686.55 160686.55 25.378972 25.378972 Loop time of 200.736 on 1 procs for 1000 steps with 8000 atoms Performance: 0.430 ns/day, 55.760 hours/ns, 4.982 timesteps/s 86.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 200.29 | 200.29 | 200.29 | 0.0 | 99.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.054253 | 0.054253 | 0.054253 | 0.0 | 0.03 Output | 4.58e-05 | 4.58e-05 | 4.58e-05 | 0.0 | 0.00 Modify | 0.35893 | 0.35893 | 0.35893 | 0.0 | 0.18 Other | | 0.03312 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7675.00 ave 7675 max 7675 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 552570.0 ave 552570 max 552570 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 552570 Ave neighs/atom = 69.071250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.389131615229, Press = -0.638694813720285 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -36369.846 -36369.846 -36694.397 -36694.397 313.89375 313.89375 160686.55 160686.55 25.378972 25.378972 16000 -36377.159 -36377.159 -36705.441 -36705.441 317.50143 317.50143 160726.07 160726.07 -318.02555 -318.02555 Loop time of 204.241 on 1 procs for 1000 steps with 8000 atoms Performance: 0.423 ns/day, 56.734 hours/ns, 4.896 timesteps/s 85.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 203.75 | 203.75 | 203.75 | 0.0 | 99.76 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.055729 | 0.055729 | 0.055729 | 0.0 | 0.03 Output | 4.5e-05 | 4.5e-05 | 4.5e-05 | 0.0 | 0.00 Modify | 0.3843 | 0.3843 | 0.3843 | 0.0 | 0.19 Other | | 0.04802 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7700.00 ave 7700 max 7700 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 551522.0 ave 551522 max 551522 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 551522 Ave neighs/atom = 68.940250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.398834291954, Press = 0.376711429608663 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -36377.159 -36377.159 -36705.441 -36705.441 317.50143 317.50143 160726.07 160726.07 -318.02555 -318.02555 17000 -36381.165 -36381.165 -36703.38 -36703.38 311.63473 311.63473 160737 160737 -423.20787 -423.20787 Loop time of 191.129 on 1 procs for 1000 steps with 8000 atoms Performance: 0.452 ns/day, 53.091 hours/ns, 5.232 timesteps/s 90.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 190.65 | 190.65 | 190.65 | 0.0 | 99.75 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.075346 | 0.075346 | 0.075346 | 0.0 | 0.04 Output | 4.42e-05 | 4.42e-05 | 4.42e-05 | 0.0 | 0.00 Modify | 0.3731 | 0.3731 | 0.3731 | 0.0 | 0.20 Other | | 0.03333 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7640.00 ave 7640 max 7640 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 552030.0 ave 552030 max 552030 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 552030 Ave neighs/atom = 69.003750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.334689671467, Press = 0.606092794861475 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -36381.165 -36381.165 -36703.38 -36703.38 311.63473 311.63473 160737 160737 -423.20787 -423.20787 18000 -36372.868 -36372.868 -36695.971 -36695.971 312.49302 312.49302 160692.65 160692.65 -63.018924 -63.018924 Loop time of 203.224 on 1 procs for 1000 steps with 8000 atoms Performance: 0.425 ns/day, 56.451 hours/ns, 4.921 timesteps/s 85.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 202.73 | 202.73 | 202.73 | 0.0 | 99.76 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.053969 | 0.053969 | 0.053969 | 0.0 | 0.03 Output | 3.6e-05 | 3.6e-05 | 3.6e-05 | 0.0 | 0.00 Modify | 0.40182 | 0.40182 | 0.40182 | 0.0 | 0.20 Other | | 0.03335 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7678.00 ave 7678 max 7678 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 552052.0 ave 552052 max 552052 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 552052 Ave neighs/atom = 69.006500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.210987449729, Press = 1.408236594039 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -36372.868 -36372.868 -36695.971 -36695.971 312.49302 312.49302 160692.65 160692.65 -63.018924 -63.018924 19000 -36383.783 -36383.783 -36704.395 -36704.395 310.0841 310.0841 160643.8 160643.8 14.343707 14.343707 Loop time of 185.794 on 1 procs for 1000 steps with 8000 atoms Performance: 0.465 ns/day, 51.609 hours/ns, 5.382 timesteps/s 93.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 185.33 | 185.33 | 185.33 | 0.0 | 99.75 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.053569 | 0.053569 | 0.053569 | 0.0 | 0.03 Output | 4.74e-05 | 4.74e-05 | 4.74e-05 | 0.0 | 0.00 Modify | 0.35469 | 0.35469 | 0.35469 | 0.0 | 0.19 Other | | 0.05324 | | | 0.03 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7627.00 ave 7627 max 7627 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 551538.0 ave 551538 max 551538 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 551538 Ave neighs/atom = 68.942250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.170149750528, Press = 1.04641829434874 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -36383.783 -36383.783 -36704.395 -36704.395 310.0841 310.0841 160643.8 160643.8 14.343707 14.343707 20000 -36376.039 -36376.039 -36698.61 -36698.61 311.97898 311.97898 160672.21 160672.21 -51.727523 -51.727523 Loop time of 184.239 on 1 procs for 1000 steps with 8000 atoms Performance: 0.469 ns/day, 51.177 hours/ns, 5.428 timesteps/s 93.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 183.84 | 183.84 | 183.84 | 0.0 | 99.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.053157 | 0.053157 | 0.053157 | 0.0 | 0.03 Output | 4.48e-05 | 4.48e-05 | 4.48e-05 | 0.0 | 0.00 Modify | 0.31235 | 0.31235 | 0.31235 | 0.0 | 0.17 Other | | 0.03294 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7658.00 ave 7658 max 7658 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 552172.0 ave 552172 max 552172 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 552172 Ave neighs/atom = 69.021500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.106862227129, Press = 0.792875515925578 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -36376.039 -36376.039 -36698.61 -36698.61 311.97898 311.97898 160672.21 160672.21 -51.727523 -51.727523 21000 -36385.23 -36385.23 -36705.436 -36705.436 309.69092 309.69092 160651.67 160651.67 7.9538874 7.9538874 Loop time of 183.975 on 1 procs for 1000 steps with 8000 atoms Performance: 0.470 ns/day, 51.104 hours/ns, 5.436 timesteps/s 94.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 183.58 | 183.58 | 183.58 | 0.0 | 99.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.053944 | 0.053944 | 0.053944 | 0.0 | 0.03 Output | 7.75e-05 | 7.75e-05 | 7.75e-05 | 0.0 | 0.00 Modify | 0.31295 | 0.31295 | 0.31295 | 0.0 | 0.17 Other | | 0.03329 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7676.00 ave 7676 max 7676 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 551744.0 ave 551744 max 551744 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 551744 Ave neighs/atom = 68.968000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.039231870898, Press = 0.704745613857713 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -36385.23 -36385.23 -36705.436 -36705.436 309.69092 309.69092 160651.67 160651.67 7.9538874 7.9538874 22000 -36376.915 -36376.915 -36700.38 -36700.38 312.84342 312.84342 160681.71 160681.71 -73.658157 -73.658157 Loop time of 182.566 on 1 procs for 1000 steps with 8000 atoms Performance: 0.473 ns/day, 50.713 hours/ns, 5.477 timesteps/s 94.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 182.17 | 182.17 | 182.17 | 0.0 | 99.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.053444 | 0.053444 | 0.053444 | 0.0 | 0.03 Output | 3.76e-05 | 3.76e-05 | 3.76e-05 | 0.0 | 0.00 Modify | 0.31282 | 0.31282 | 0.31282 | 0.0 | 0.17 Other | | 0.03312 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7673.00 ave 7673 max 7673 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 552296.0 ave 552296 max 552296 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 552296 Ave neighs/atom = 69.037000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.087836393406, Press = 0.576909137441257 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -36376.915 -36376.915 -36700.38 -36700.38 312.84342 312.84342 160681.71 160681.71 -73.658157 -73.658157 23000 -36366.407 -36366.407 -36695.735 -36695.735 318.51347 318.51347 160722.75 160722.75 -196.69054 -196.69054 Loop time of 173.544 on 1 procs for 1000 steps with 8000 atoms Performance: 0.498 ns/day, 48.207 hours/ns, 5.762 timesteps/s 99.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 173.13 | 173.13 | 173.13 | 0.0 | 99.76 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.053311 | 0.053311 | 0.053311 | 0.0 | 0.03 Output | 4.82e-05 | 4.82e-05 | 4.82e-05 | 0.0 | 0.00 Modify | 0.3299 | 0.3299 | 0.3299 | 0.0 | 0.19 Other | | 0.03282 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7629.00 ave 7629 max 7629 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 551912.0 ave 551912 max 551912 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 551912 Ave neighs/atom = 68.989000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.125097564801, Press = 1.06196430045261 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -36366.407 -36366.407 -36695.735 -36695.735 318.51347 318.51347 160722.75 160722.75 -196.69054 -196.69054 24000 -36378.974 -36378.974 -36705.82 -36705.82 316.11327 316.11327 160581.34 160581.34 454.7764 454.7764 Loop time of 172.025 on 1 procs for 1000 steps with 8000 atoms Performance: 0.502 ns/day, 47.785 hours/ns, 5.813 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 171.63 | 171.63 | 171.63 | 0.0 | 99.77 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.052872 | 0.052872 | 0.052872 | 0.0 | 0.03 Output | 3.86e-05 | 3.86e-05 | 3.86e-05 | 0.0 | 0.00 Modify | 0.30986 | 0.30986 | 0.30986 | 0.0 | 0.18 Other | | 0.03302 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7651.00 ave 7651 max 7651 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 551724.0 ave 551724 max 551724 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 551724 Ave neighs/atom = 68.965500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.202703884357, Press = 1.40260457855423 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -36378.974 -36378.974 -36705.82 -36705.82 316.11327 316.11327 160581.34 160581.34 454.7764 454.7764 25000 -36369.887 -36369.887 -36695.366 -36695.366 314.79086 314.79086 160528.82 160528.82 921.17213 921.17213 Loop time of 172.132 on 1 procs for 1000 steps with 8000 atoms Performance: 0.502 ns/day, 47.815 hours/ns, 5.809 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 171.74 | 171.74 | 171.74 | 0.0 | 99.77 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.053365 | 0.053365 | 0.053365 | 0.0 | 0.03 Output | 4.96e-05 | 4.96e-05 | 4.96e-05 | 0.0 | 0.00 Modify | 0.31035 | 0.31035 | 0.31035 | 0.0 | 0.18 Other | | 0.03293 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7690.00 ave 7690 max 7690 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 552436.0 ave 552436 max 552436 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 552436 Ave neighs/atom = 69.054500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.251483052874, Press = 0.739493469011717 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -36369.887 -36369.887 -36695.366 -36695.366 314.79086 314.79086 160528.82 160528.82 921.17213 921.17213 26000 -36374.742 -36374.742 -36698.056 -36698.056 312.69718 312.69718 160587.92 160587.92 630.2906 630.2906 Loop time of 172.901 on 1 procs for 1000 steps with 8000 atoms Performance: 0.500 ns/day, 48.028 hours/ns, 5.784 timesteps/s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 172.5 | 172.5 | 172.5 | 0.0 | 99.77 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.053094 | 0.053094 | 0.053094 | 0.0 | 0.03 Output | 3.8e-05 | 3.8e-05 | 3.8e-05 | 0.0 | 0.00 Modify | 0.31401 | 0.31401 | 0.31401 | 0.0 | 0.18 Other | | 0.0333 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7627.00 ave 7627 max 7627 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 552020.0 ave 552020 max 552020 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 552020 Ave neighs/atom = 69.002500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.233261096343, Press = -0.41970127517156 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 7.896 | 7.896 | 7.896 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 26000 -36374.742 -36374.742 -36698.056 -36698.056 312.69718 312.69718 160587.92 160587.92 630.2906 630.2906 27000 -36374.171 -36374.171 -36702.54 -36702.54 317.58627 317.58627 160698.22 160698.22 -115.28772 -115.28772 Loop time of 172.807 on 1 procs for 1000 steps with 8000 atoms Performance: 0.500 ns/day, 48.002 hours/ns, 5.787 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 172.41 | 172.41 | 172.41 | 0.0 | 99.77 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.053709 | 0.053709 | 0.053709 | 0.0 | 0.03 Output | 4.3e-05 | 4.3e-05 | 4.3e-05 | 0.0 | 0.00 Modify | 0.31205 | 0.31205 | 0.31205 | 0.0 | 0.18 Other | | 0.03307 | | | 0.02 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7716.00 ave 7716 max 7716 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 552320.0 ave 552320 max 552320 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 552320 Ave neighs/atom = 69.040000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 160670.618191112 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0