# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.4223007559776315*${_u_distance} variable latticeconst_converted equal 5.4223007559776315*1 lattice diamond ${latticeconst_converted} lattice diamond 5.42230075597763 Lattice spacing in x,y,z = 5.4223008 5.4223008 5.4223008 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (54.223008 54.223008 54.223008) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0 0 0) to (54.223008 54.223008 54.223008) create_atoms CPU = 0.001 seconds variable mass_converted equal 28.0855*${_u_mass} variable mass_converted equal 28.0855*1 kim_interactions Si WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Si #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_CuiGaoCui_2012_LiSi__MO_557492625287_002 pair_coeff * * Si #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 28.0855 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 159422.937867836 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 159422.937867836/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 159422.937867836/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 159422.937867836/(1*1*${_u_distance}) variable V0_metal equal 159422.937867836/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 159422.937867836*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 159422.937867836 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_557492625287_002#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 7.894 | 7.894 | 7.894 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -36768.337 -36768.337 -37030.082 -37030.082 253.15 253.15 159422.94 159422.94 1753.6539 1753.6539 1000 -36483.605 -36483.605 -36781.953 -36781.953 288.55083 288.55083 160611.97 160611.97 -1562.9124 -1562.9124 Loop time of 275.926 on 1 procs for 1000 steps with 8000 atoms Performance: 0.313 ns/day, 76.646 hours/ns, 3.624 timesteps/s 55.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 275.32 | 275.32 | 275.32 | 0.0 | 99.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.061125 | 0.061125 | 0.061125 | 0.0 | 0.02 Output | 0.00021317 | 0.00021317 | 0.00021317 | 0.0 | 0.00 Modify | 0.46997 | 0.46997 | 0.46997 | 0.0 | 0.17 Other | | 0.07204 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 560000 ave 560000 max 560000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 560000 Ave neighs/atom = 70 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.136 | 8.136 | 8.136 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -36483.605 -36483.605 -36781.953 -36781.953 288.55083 288.55083 160611.97 160611.97 -1562.9124 -1562.9124 2000 -36511.48 -36511.48 -36768.868 -36768.868 248.93575 248.93575 160299.22 160299.22 667.8775 667.8775 Loop time of 295.842 on 1 procs for 1000 steps with 8000 atoms Performance: 0.292 ns/day, 82.178 hours/ns, 3.380 timesteps/s 56.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 295.24 | 295.24 | 295.24 | 0.0 | 99.80 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.053386 | 0.053386 | 0.053386 | 0.0 | 0.02 Output | 0.00011663 | 0.00011663 | 0.00011663 | 0.0 | 0.00 Modify | 0.46423 | 0.46423 | 0.46423 | 0.0 | 0.16 Other | | 0.08518 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7661 ave 7661 max 7661 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555150 ave 555150 max 555150 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555150 Ave neighs/atom = 69.39375 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.138 | 8.138 | 8.138 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -36511.48 -36511.48 -36768.868 -36768.868 248.93575 248.93575 160299.22 160299.22 667.8775 667.8775 3000 -36497.802 -36497.802 -36761.655 -36761.655 255.18809 255.18809 160501.78 160501.78 -365.52359 -365.52359 Loop time of 335.106 on 1 procs for 1000 steps with 8000 atoms Performance: 0.258 ns/day, 93.085 hours/ns, 2.984 timesteps/s 50.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 334.28 | 334.28 | 334.28 | 0.0 | 99.75 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.065368 | 0.065368 | 0.065368 | 0.0 | 0.02 Output | 0.0001044 | 0.0001044 | 0.0001044 | 0.0 | 0.00 Modify | 0.62271 | 0.62271 | 0.62271 | 0.0 | 0.19 Other | | 0.1419 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7810 ave 7810 max 7810 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555628 ave 555628 max 555628 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555628 Ave neighs/atom = 69.4535 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.137 | 8.137 | 8.137 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -36497.802 -36497.802 -36761.655 -36761.655 255.18809 255.18809 160501.78 160501.78 -365.52359 -365.52359 4000 -36505.162 -36505.162 -36764.819 -36764.819 251.13037 251.13037 160388.36 160388.36 67.697502 67.697502 Loop time of 337.695 on 1 procs for 1000 steps with 8000 atoms Performance: 0.256 ns/day, 93.804 hours/ns, 2.961 timesteps/s 50.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 336.96 | 336.96 | 336.96 | 0.0 | 99.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.096198 | 0.096198 | 0.096198 | 0.0 | 0.03 Output | 0.00027822 | 0.00027822 | 0.00027822 | 0.0 | 0.00 Modify | 0.52308 | 0.52308 | 0.52308 | 0.0 | 0.15 Other | | 0.114 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7729 ave 7729 max 7729 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 554892 ave 554892 max 554892 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 554892 Ave neighs/atom = 69.3615 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.137 | 8.137 | 8.137 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -36505.162 -36505.162 -36764.819 -36764.819 251.13037 251.13037 160388.36 160388.36 67.697502 67.697502 5000 -36503.792 -36503.792 -36765.02 -36765.02 252.65009 252.65009 160418.85 160418.85 27.038791 27.038791 Loop time of 262.233 on 1 procs for 1000 steps with 8000 atoms Performance: 0.329 ns/day, 72.842 hours/ns, 3.813 timesteps/s 64.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 261.72 | 261.72 | 261.72 | 0.0 | 99.80 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.056579 | 0.056579 | 0.056579 | 0.0 | 0.02 Output | 8.4348e-05 | 8.4348e-05 | 8.4348e-05 | 0.0 | 0.00 Modify | 0.40254 | 0.40254 | 0.40254 | 0.0 | 0.15 Other | | 0.05464 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7773 ave 7773 max 7773 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555092 ave 555092 max 555092 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555092 Ave neighs/atom = 69.3865 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.699665255889, Press = 52.8581904218862 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.137 | 8.137 | 8.137 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -36503.792 -36503.792 -36765.02 -36765.02 252.65009 252.65009 160418.85 160418.85 27.038791 27.038791 6000 -36499.996 -36499.996 -36758.894 -36758.894 250.39588 250.39588 160410.96 160410.96 2.7816809 2.7816809 Loop time of 259.206 on 1 procs for 1000 steps with 8000 atoms Performance: 0.333 ns/day, 72.002 hours/ns, 3.858 timesteps/s 65.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 258.67 | 258.67 | 258.67 | 0.0 | 99.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.066744 | 0.066744 | 0.066744 | 0.0 | 0.03 Output | 8.3237e-05 | 8.3237e-05 | 8.3237e-05 | 0.0 | 0.00 Modify | 0.42697 | 0.42697 | 0.42697 | 0.0 | 0.16 Other | | 0.04332 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7770 ave 7770 max 7770 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555302 ave 555302 max 555302 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555302 Ave neighs/atom = 69.41275 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.701003375223, Press = -3.95940820454082 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.138 | 8.138 | 8.138 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -36499.996 -36499.996 -36758.894 -36758.894 250.39588 250.39588 160410.96 160410.96 2.7816809 2.7816809 7000 -36505.782 -36505.782 -36771.297 -36771.297 256.79595 256.79595 160492.04 160492.04 -443.66624 -443.66624 Loop time of 255.596 on 1 procs for 1000 steps with 8000 atoms Performance: 0.338 ns/day, 70.999 hours/ns, 3.912 timesteps/s 66.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 255.14 | 255.14 | 255.14 | 0.0 | 99.82 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.046341 | 0.046341 | 0.046341 | 0.0 | 0.02 Output | 8.3136e-05 | 8.3136e-05 | 8.3136e-05 | 0.0 | 0.00 Modify | 0.37651 | 0.37651 | 0.37651 | 0.0 | 0.15 Other | | 0.03356 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7807 ave 7807 max 7807 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 554872 ave 554872 max 554872 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 554872 Ave neighs/atom = 69.359 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.103480768124, Press = 4.76873874571494 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.137 | 8.137 | 8.137 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -36505.782 -36505.782 -36771.297 -36771.297 256.79595 256.79595 160492.04 160492.04 -443.66624 -443.66624 8000 -36497.859 -36497.859 -36762.565 -36762.565 256.01375 256.01375 160300.17 160300.17 962.88084 962.88084 Loop time of 223.638 on 1 procs for 1000 steps with 8000 atoms Performance: 0.386 ns/day, 62.122 hours/ns, 4.472 timesteps/s 80.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 223.23 | 223.23 | 223.23 | 0.0 | 99.82 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.035016 | 0.035016 | 0.035016 | 0.0 | 0.02 Output | 9.8976e-05 | 9.8976e-05 | 9.8976e-05 | 0.0 | 0.00 Modify | 0.33582 | 0.33582 | 0.33582 | 0.0 | 0.15 Other | | 0.03832 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7778 ave 7778 max 7778 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555896 ave 555896 max 555896 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555896 Ave neighs/atom = 69.487 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.053949138223, Press = -0.480113660845615 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.137 | 8.137 | 8.137 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -36497.859 -36497.859 -36762.565 -36762.565 256.01375 256.01375 160300.17 160300.17 962.88084 962.88084 9000 -36505.855 -36505.855 -36764.59 -36764.59 250.2389 250.2389 160555.92 160555.92 -855.04 -855.04 Loop time of 208.229 on 1 procs for 1000 steps with 8000 atoms Performance: 0.415 ns/day, 57.841 hours/ns, 4.802 timesteps/s 89.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 207.83 | 207.83 | 207.83 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.036214 | 0.036214 | 0.036214 | 0.0 | 0.02 Output | 9.1312e-05 | 9.1312e-05 | 9.1312e-05 | 0.0 | 0.00 Modify | 0.32999 | 0.32999 | 0.32999 | 0.0 | 0.16 Other | | 0.02872 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7780 ave 7780 max 7780 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555608 ave 555608 max 555608 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555608 Ave neighs/atom = 69.451 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.079918677479, Press = 0.279989486660496 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.137 | 8.137 | 8.137 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -36505.855 -36505.855 -36764.59 -36764.59 250.2389 250.2389 160555.92 160555.92 -855.04 -855.04 10000 -36500.67 -36500.67 -36757.73 -36757.73 248.61922 248.61922 160378.82 160378.82 249.45775 249.45775 Loop time of 218.886 on 1 procs for 1000 steps with 8000 atoms Performance: 0.395 ns/day, 60.802 hours/ns, 4.569 timesteps/s 85.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 218.43 | 218.43 | 218.43 | 0.0 | 99.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.036998 | 0.036998 | 0.036998 | 0.0 | 0.02 Output | 8.8215e-05 | 8.8215e-05 | 8.8215e-05 | 0.0 | 0.00 Modify | 0.38236 | 0.38236 | 0.38236 | 0.0 | 0.17 Other | | 0.03226 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7719 ave 7719 max 7719 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 554840 ave 554840 max 554840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 554840 Ave neighs/atom = 69.355 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.143852293822, Press = 0.833321259699442 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.137 | 8.137 | 8.137 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -36500.67 -36500.67 -36757.73 -36757.73 248.61922 248.61922 160378.82 160378.82 249.45775 249.45775 11000 -36500.343 -36500.343 -36766.365 -36766.365 257.28641 257.28641 160485.54 160485.54 -394.25989 -394.25989 Loop time of 214.905 on 1 procs for 1000 steps with 8000 atoms Performance: 0.402 ns/day, 59.696 hours/ns, 4.653 timesteps/s 87.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 214.52 | 214.52 | 214.52 | 0.0 | 99.82 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.037756 | 0.037756 | 0.037756 | 0.0 | 0.02 Output | 8.8095e-05 | 8.8095e-05 | 8.8095e-05 | 0.0 | 0.00 Modify | 0.31847 | 0.31847 | 0.31847 | 0.0 | 0.15 Other | | 0.03107 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7722 ave 7722 max 7722 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555006 ave 555006 max 555006 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555006 Ave neighs/atom = 69.37575 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.183016619084, Press = 0.300939717076073 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.139 | 8.139 | 8.139 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -36500.343 -36500.343 -36766.365 -36766.365 257.28641 257.28641 160485.54 160485.54 -394.25989 -394.25989 12000 -36505.034 -36505.034 -36760.56 -36760.56 247.13546 247.13546 160370.24 160370.24 312.03708 312.03708 Loop time of 178.037 on 1 procs for 1000 steps with 8000 atoms Performance: 0.485 ns/day, 49.455 hours/ns, 5.617 timesteps/s 99.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 177.69 | 177.69 | 177.69 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.035502 | 0.035502 | 0.035502 | 0.0 | 0.02 Output | 8.1744e-05 | 8.1744e-05 | 8.1744e-05 | 0.0 | 0.00 Modify | 0.27732 | 0.27732 | 0.27732 | 0.0 | 0.16 Other | | 0.02905 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7738 ave 7738 max 7738 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555250 ave 555250 max 555250 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555250 Ave neighs/atom = 69.40625 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.336169022867, Press = -0.422375248381793 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.139 | 8.139 | 8.139 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -36505.034 -36505.034 -36760.56 -36760.56 247.13546 247.13546 160370.24 160370.24 312.03708 312.03708 13000 -36498.202 -36498.202 -36758.88 -36758.88 252.11837 252.11837 160475.72 160475.72 -218.16253 -218.16253 Loop time of 167.729 on 1 procs for 1000 steps with 8000 atoms Performance: 0.515 ns/day, 46.591 hours/ns, 5.962 timesteps/s 99.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 167.41 | 167.41 | 167.41 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.033412 | 0.033412 | 0.033412 | 0.0 | 0.02 Output | 7.8928e-05 | 7.8928e-05 | 7.8928e-05 | 0.0 | 0.00 Modify | 0.26138 | 0.26138 | 0.26138 | 0.0 | 0.16 Other | | 0.02742 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7726 ave 7726 max 7726 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555412 ave 555412 max 555412 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555412 Ave neighs/atom = 69.4265 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.367289890085, Press = 1.05413674399941 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.139 | 8.139 | 8.139 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -36498.202 -36498.202 -36758.88 -36758.88 252.11837 252.11837 160475.72 160475.72 -218.16253 -218.16253 14000 -36503.597 -36503.597 -36758.945 -36758.945 246.96312 246.96312 160428.93 160428.93 -111.83946 -111.83946 Loop time of 168.255 on 1 procs for 1000 steps with 8000 atoms Performance: 0.514 ns/day, 46.737 hours/ns, 5.943 timesteps/s 99.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 167.93 | 167.93 | 167.93 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.03287 | 0.03287 | 0.03287 | 0.0 | 0.02 Output | 8.0691e-05 | 8.0691e-05 | 8.0691e-05 | 0.0 | 0.00 Modify | 0.26108 | 0.26108 | 0.26108 | 0.0 | 0.16 Other | | 0.02677 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7733 ave 7733 max 7733 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 554812 ave 554812 max 554812 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 554812 Ave neighs/atom = 69.3515 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.33309113434, Press = -1.26579311312827 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.139 | 8.139 | 8.139 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -36503.597 -36503.597 -36758.945 -36758.945 246.96312 246.96312 160428.93 160428.93 -111.83946 -111.83946 15000 -36504.28 -36504.28 -36765.738 -36765.738 252.87229 252.87229 160438.29 160438.29 -193.48381 -193.48381 Loop time of 168.539 on 1 procs for 1000 steps with 8000 atoms Performance: 0.513 ns/day, 46.816 hours/ns, 5.933 timesteps/s 99.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 168.21 | 168.21 | 168.21 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.03344 | 0.03344 | 0.03344 | 0.0 | 0.02 Output | 9.1161e-05 | 9.1161e-05 | 9.1161e-05 | 0.0 | 0.00 Modify | 0.26381 | 0.26381 | 0.26381 | 0.0 | 0.16 Other | | 0.02814 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7723 ave 7723 max 7723 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 554678 ave 554678 max 554678 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 554678 Ave neighs/atom = 69.33475 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.309788204939, Press = 1.77240608139156 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.138 | 8.138 | 8.138 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -36504.28 -36504.28 -36765.738 -36765.738 252.87229 252.87229 160438.29 160438.29 -193.48381 -193.48381 16000 -36503.236 -36503.236 -36765.163 -36765.163 253.3261 253.3261 160411.29 160411.29 -13.441769 -13.441769 Loop time of 168.176 on 1 procs for 1000 steps with 8000 atoms Performance: 0.514 ns/day, 46.715 hours/ns, 5.946 timesteps/s 99.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 167.85 | 167.85 | 167.85 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.032918 | 0.032918 | 0.032918 | 0.0 | 0.02 Output | 8.3567e-05 | 8.3567e-05 | 8.3567e-05 | 0.0 | 0.00 Modify | 0.2612 | 0.2612 | 0.2612 | 0.0 | 0.16 Other | | 0.02732 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7660 ave 7660 max 7660 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555074 ave 555074 max 555074 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555074 Ave neighs/atom = 69.38425 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.240281799421, Press = -1.54421452854083 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.139 | 8.139 | 8.139 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -36503.236 -36503.236 -36765.163 -36765.163 253.3261 253.3261 160411.29 160411.29 -13.441769 -13.441769 17000 -36501.027 -36501.027 -36763.421 -36763.421 253.77796 253.77796 160484.6 160484.6 -360.79585 -360.79585 Loop time of 167.873 on 1 procs for 1000 steps with 8000 atoms Performance: 0.515 ns/day, 46.631 hours/ns, 5.957 timesteps/s 99.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 167.54 | 167.54 | 167.54 | 0.0 | 99.80 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.034869 | 0.034869 | 0.034869 | 0.0 | 0.02 Output | 0.00010997 | 0.00010997 | 0.00010997 | 0.0 | 0.00 Modify | 0.27211 | 0.27211 | 0.27211 | 0.0 | 0.16 Other | | 0.02823 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7677 ave 7677 max 7677 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555166 ave 555166 max 555166 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555166 Ave neighs/atom = 69.39575 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.287375313021, Press = 1.5827722610311 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.138 | 8.138 | 8.138 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -36501.027 -36501.027 -36763.421 -36763.421 253.77796 253.77796 160484.6 160484.6 -360.79585 -360.79585 18000 -36497.615 -36497.615 -36759.975 -36759.975 253.74512 253.74512 160382.11 160382.11 318.7891 318.7891 Loop time of 167.207 on 1 procs for 1000 steps with 8000 atoms Performance: 0.517 ns/day, 46.446 hours/ns, 5.981 timesteps/s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 166.89 | 166.89 | 166.89 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.030855 | 0.030855 | 0.030855 | 0.0 | 0.02 Output | 0.0001351 | 0.0001351 | 0.0001351 | 0.0 | 0.00 Modify | 0.25972 | 0.25972 | 0.25972 | 0.0 | 0.16 Other | | 0.02367 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7654 ave 7654 max 7654 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555194 ave 555194 max 555194 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555194 Ave neighs/atom = 69.39925 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.321555491973, Press = -0.843604128933671 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.139 | 8.139 | 8.139 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -36497.615 -36497.615 -36759.975 -36759.975 253.74512 253.74512 160382.11 160382.11 318.7891 318.7891 19000 -36505.168 -36505.168 -36765.394 -36765.394 251.6813 251.6813 160443.97 160443.97 -130.19545 -130.19545 Loop time of 167.098 on 1 procs for 1000 steps with 8000 atoms Performance: 0.517 ns/day, 46.416 hours/ns, 5.985 timesteps/s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 166.78 | 166.78 | 166.78 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.031214 | 0.031214 | 0.031214 | 0.0 | 0.02 Output | 8.1664e-05 | 8.1664e-05 | 8.1664e-05 | 0.0 | 0.00 Modify | 0.25795 | 0.25795 | 0.25795 | 0.0 | 0.15 Other | | 0.02403 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7744 ave 7744 max 7744 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555102 ave 555102 max 555102 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555102 Ave neighs/atom = 69.38775 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.378455403848, Press = 0.865409243518728 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.138 | 8.138 | 8.138 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -36505.168 -36505.168 -36765.394 -36765.394 251.6813 251.6813 160443.97 160443.97 -130.19545 -130.19545 20000 -36502.602 -36502.602 -36762.957 -36762.957 251.80569 251.80569 160441.07 160441.07 -72.965867 -72.965867 Loop time of 166.991 on 1 procs for 1000 steps with 8000 atoms Performance: 0.517 ns/day, 46.386 hours/ns, 5.988 timesteps/s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 166.68 | 166.68 | 166.68 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.030909 | 0.030909 | 0.030909 | 0.0 | 0.02 Output | 8.1112e-05 | 8.1112e-05 | 8.1112e-05 | 0.0 | 0.00 Modify | 0.25787 | 0.25787 | 0.25787 | 0.0 | 0.15 Other | | 0.0239 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7638 ave 7638 max 7638 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555392 ave 555392 max 555392 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555392 Ave neighs/atom = 69.424 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.360880736746, Press = -0.207980612251683 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.139 | 8.139 | 8.139 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -36502.602 -36502.602 -36762.957 -36762.957 251.80569 251.80569 160441.07 160441.07 -72.965867 -72.965867 21000 -36502.652 -36502.652 -36762.164 -36762.164 250.99088 250.99088 160399.39 160399.39 164.15291 164.15291 Loop time of 166.943 on 1 procs for 1000 steps with 8000 atoms Performance: 0.518 ns/day, 46.373 hours/ns, 5.990 timesteps/s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 166.63 | 166.63 | 166.63 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.031333 | 0.031333 | 0.031333 | 0.0 | 0.02 Output | 8.6002e-05 | 8.6002e-05 | 8.6002e-05 | 0.0 | 0.00 Modify | 0.25824 | 0.25824 | 0.25824 | 0.0 | 0.15 Other | | 0.0237 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7721 ave 7721 max 7721 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555260 ave 555260 max 555260 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555260 Ave neighs/atom = 69.4075 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.311220161688, Press = 0.21698646616345 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.8 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.139 | 8.139 | 8.139 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -36502.652 -36502.652 -36762.164 -36762.164 250.99088 250.99088 160399.39 160399.39 164.15291 164.15291 22000 -36505.065 -36505.065 -36763.913 -36763.913 250.34759 250.34759 160482.57 160482.57 -373.96916 -373.96916 Loop time of 166.981 on 1 procs for 1000 steps with 8000 atoms Performance: 0.517 ns/day, 46.384 hours/ns, 5.989 timesteps/s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 166.67 | 166.67 | 166.67 | 0.0 | 99.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.031071 | 0.031071 | 0.031071 | 0.0 | 0.02 Output | 8.3537e-05 | 8.3537e-05 | 8.3537e-05 | 0.0 | 0.00 Modify | 0.25851 | 0.25851 | 0.25851 | 0.0 | 0.15 Other | | 0.02336 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7696 ave 7696 max 7696 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 554958 ave 554958 max 554958 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 554958 Ave neighs/atom = 69.36975 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 160423.711164044 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0