# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.433560132980347*${_u_distance} variable latticeconst_converted equal 5.433560132980347*1 lattice diamond ${latticeconst_converted} lattice diamond 5.43356013298035 Lattice spacing in x,y,z = 5.43356 5.43356 5.43356 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (54.3356 54.3356 54.3356) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms create_atoms CPU = 0.000594139 secs variable mass_converted equal 28.0855*${_u_mass} variable mass_converted equal 28.0855*1 # specify which KIM Model to use pair_style kim ThreeBodyBondOrder_PPM_PurjaPunMishin_2017_Si__MO_566683736730_000 WARNING: KIM Model does not provide `partialParticleVirial'; virial per atom will be zero (src/KIM/pair_kim.cpp:1089) pair_coeff * * Si mass 1 ${mass_converted} mass 1 28.0855 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 160418.124008228 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 160418.124008228/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 160418.124008228/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 160418.124008228/(1*1*${_u_distance}) variable V0_metal equal 160418.124008228/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 160418.124008228*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 160418.124008228 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.20569 ghost atom cutoff = 5.20569 binsize = 2.60285, bins = 21 21 21 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5.20569 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -36778.254 -36778.254 -37039.999 -37039.999 253.15 253.15 160418.12 160418.12 1742.7887 1742.7887 1000 -36482.768 -36482.768 -36747.196 -36747.196 255.74448 255.74448 161434.86 161434.86 -937.24676 -937.24676 Loop time of 112.504 on 1 procs for 1000 steps with 8000 atoms Performance: 0.768 ns/day, 31.251 hours/ns, 8.889 timesteps/s 45.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 111.72 | 111.72 | 111.72 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.044209 | 0.044209 | 0.044209 | 0.0 | 0.04 Output | 7.1049e-05 | 7.1049e-05 | 7.1049e-05 | 0.0 | 0.00 Modify | 0.64573 | 0.64573 | 0.64573 | 0.0 | 0.57 Other | | 0.09467 | | | 0.08 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224000 ave 224000 max 224000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224000 Ave neighs/atom = 28 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -36482.768 -36482.768 -36747.196 -36747.196 255.74448 255.74448 161434.86 161434.86 -937.24676 -937.24676 2000 -36513.492 -36513.492 -36773.889 -36773.889 251.84586 251.84586 161189.66 161189.66 286.20287 286.20287 Loop time of 116.584 on 1 procs for 1000 steps with 8000 atoms Performance: 0.741 ns/day, 32.385 hours/ns, 8.577 timesteps/s 45.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 115.72 | 115.72 | 115.72 | 0.0 | 99.26 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1235 | 0.1235 | 0.1235 | 0.0 | 0.11 Output | 5.8889e-05 | 5.8889e-05 | 5.8889e-05 | 0.0 | 0.00 Modify | 0.68794 | 0.68794 | 0.68794 | 0.0 | 0.59 Other | | 0.05425 | | | 0.05 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224046 ave 224046 max 224046 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224046 Ave neighs/atom = 28.0057 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -36513.492 -36513.492 -36773.889 -36773.889 251.84586 251.84586 161189.66 161189.66 286.20287 286.20287 3000 -36494.492 -36494.492 -36765.125 -36765.125 261.74616 261.74616 161265.01 161265.01 26.442227 26.442227 Loop time of 115.396 on 1 procs for 1000 steps with 8000 atoms Performance: 0.749 ns/day, 32.055 hours/ns, 8.666 timesteps/s 45.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 114.4 | 114.4 | 114.4 | 0.0 | 99.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14336 | 0.14336 | 0.14336 | 0.0 | 0.12 Output | 5.5075e-05 | 5.5075e-05 | 5.5075e-05 | 0.0 | 0.00 Modify | 0.80028 | 0.80028 | 0.80028 | 0.0 | 0.69 Other | | 0.05491 | | | 0.05 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224024 ave 224024 max 224024 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224024 Ave neighs/atom = 28.003 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -36494.492 -36494.492 -36765.125 -36765.125 261.74616 261.74616 161265.01 161265.01 26.442227 26.442227 4000 -36505.682 -36505.682 -36764.166 -36764.166 249.99634 249.99634 161259.79 161259.79 -49.951495 -49.951495 Loop time of 118.566 on 1 procs for 1000 steps with 8000 atoms Performance: 0.729 ns/day, 32.935 hours/ns, 8.434 timesteps/s 44.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 117.58 | 117.58 | 117.58 | 0.0 | 99.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.18419 | 0.18419 | 0.18419 | 0.0 | 0.16 Output | 4.6968e-05 | 4.6968e-05 | 4.6968e-05 | 0.0 | 0.00 Modify | 0.68309 | 0.68309 | 0.68309 | 0.0 | 0.58 Other | | 0.1146 | | | 0.10 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224010 ave 224010 max 224010 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224010 Ave neighs/atom = 28.0012 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -36505.682 -36505.682 -36764.166 -36764.166 249.99634 249.99634 161259.79 161259.79 -49.951495 -49.951495 5000 -36500.459 -36500.459 -36763.254 -36763.254 254.16529 254.16529 161208.22 161208.22 333.97012 333.97012 Loop time of 112.289 on 1 procs for 1000 steps with 8000 atoms Performance: 0.769 ns/day, 31.191 hours/ns, 8.906 timesteps/s 47.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 111.41 | 111.41 | 111.41 | 0.0 | 99.22 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10357 | 0.10357 | 0.10357 | 0.0 | 0.09 Output | 5.0068e-05 | 5.0068e-05 | 5.0068e-05 | 0.0 | 0.00 Modify | 0.71835 | 0.71835 | 0.71835 | 0.0 | 0.64 Other | | 0.05449 | | | 0.05 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224032 ave 224032 max 224032 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224032 Ave neighs/atom = 28.004 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 254.947598422345, Press = -235.521565738581 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -36500.459 -36500.459 -36763.254 -36763.254 254.16529 254.16529 161208.22 161208.22 333.97012 333.97012 6000 -36503.682 -36503.682 -36763.118 -36763.118 250.91699 250.91699 161382.88 161382.88 -791.98964 -791.98964 Loop time of 111.83 on 1 procs for 1000 steps with 8000 atoms Performance: 0.773 ns/day, 31.064 hours/ns, 8.942 timesteps/s 47.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 110.9 | 110.9 | 110.9 | 0.0 | 99.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10387 | 0.10387 | 0.10387 | 0.0 | 0.09 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.75434 | 0.75434 | 0.75434 | 0.0 | 0.67 Other | | 0.07495 | | | 0.07 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224036 ave 224036 max 224036 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224036 Ave neighs/atom = 28.0045 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.970782618967, Press = -5.26307867823002 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -36503.682 -36503.682 -36763.118 -36763.118 250.91699 250.91699 161382.88 161382.88 -791.98964 -791.98964 7000 -36501.341 -36501.341 -36763.963 -36763.963 253.99804 253.99804 161095.52 161095.52 952.78017 952.78017 Loop time of 128.43 on 1 procs for 1000 steps with 8000 atoms Performance: 0.673 ns/day, 35.675 hours/ns, 7.786 timesteps/s 41.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.72 | 127.72 | 127.72 | 0.0 | 99.45 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10332 | 0.10332 | 0.10332 | 0.0 | 0.08 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.53354 | 0.53354 | 0.53354 | 0.0 | 0.42 Other | | 0.07417 | | | 0.06 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224028 ave 224028 max 224028 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224028 Ave neighs/atom = 28.0035 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.283099328398, Press = -4.40088190695682 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -36501.341 -36501.341 -36763.963 -36763.963 253.99804 253.99804 161095.52 161095.52 952.78017 952.78017 8000 -36501.591 -36501.591 -36764.958 -36764.958 254.71855 254.71855 161327.21 161327.21 -421.05699 -421.05699 Loop time of 127.303 on 1 procs for 1000 steps with 8000 atoms Performance: 0.679 ns/day, 35.362 hours/ns, 7.855 timesteps/s 41.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 126.44 | 126.44 | 126.44 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10358 | 0.10358 | 0.10358 | 0.0 | 0.08 Output | 5.6982e-05 | 5.6982e-05 | 5.6982e-05 | 0.0 | 0.00 Modify | 0.70709 | 0.70709 | 0.70709 | 0.0 | 0.56 Other | | 0.05414 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224036 ave 224036 max 224036 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224036 Ave neighs/atom = 28.0045 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.105803528752, Press = -6.48518182784107 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -36501.591 -36501.591 -36764.958 -36764.958 254.71855 254.71855 161327.21 161327.21 -421.05699 -421.05699 9000 -36504.493 -36504.493 -36763.105 -36763.105 250.12 250.12 161226.17 161226.17 212.51787 212.51787 Loop time of 121.54 on 1 procs for 1000 steps with 8000 atoms Performance: 0.711 ns/day, 33.761 hours/ns, 8.228 timesteps/s 43.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 120.85 | 120.85 | 120.85 | 0.0 | 99.43 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.062928 | 0.062928 | 0.062928 | 0.0 | 0.05 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.5942 | 0.5942 | 0.5942 | 0.0 | 0.49 Other | | 0.03393 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224014 ave 224014 max 224014 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224014 Ave neighs/atom = 28.0018 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.191523953367, Press = -1.24554552827582 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -36504.493 -36504.493 -36763.105 -36763.105 250.12 250.12 161226.17 161226.17 212.51787 212.51787 10000 -36499.588 -36499.588 -36761.322 -36761.322 253.14002 253.14002 161260.77 161260.77 -42.227339 -42.227339 Loop time of 121.365 on 1 procs for 1000 steps with 8000 atoms Performance: 0.712 ns/day, 33.713 hours/ns, 8.240 timesteps/s 43.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 120.36 | 120.36 | 120.36 | 0.0 | 99.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.16401 | 0.16401 | 0.16401 | 0.0 | 0.14 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.80544 | 0.80544 | 0.80544 | 0.0 | 0.66 Other | | 0.03442 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224030 ave 224030 max 224030 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224030 Ave neighs/atom = 28.0038 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.11942555215, Press = -3.26093979681344 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -36499.588 -36499.588 -36761.322 -36761.322 253.14002 253.14002 161260.77 161260.77 -42.227339 -42.227339 11000 -36505.274 -36505.274 -36764.099 -36764.099 250.32668 250.32668 161343.63 161343.63 -538.36373 -538.36373 Loop time of 111.51 on 1 procs for 1000 steps with 8000 atoms Performance: 0.775 ns/day, 30.975 hours/ns, 8.968 timesteps/s 47.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 110.71 | 110.71 | 110.71 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.064415 | 0.064415 | 0.064415 | 0.0 | 0.06 Output | 4.3154e-05 | 4.3154e-05 | 4.3154e-05 | 0.0 | 0.00 Modify | 0.66218 | 0.66218 | 0.66218 | 0.0 | 0.59 Other | | 0.07488 | | | 0.07 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224036 ave 224036 max 224036 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224036 Ave neighs/atom = 28.0045 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.19206763376, Press = 0.733572114035261 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -36505.274 -36505.274 -36764.099 -36764.099 250.32668 250.32668 161343.63 161343.63 -538.36373 -538.36373 12000 -36496.022 -36496.022 -36761.883 -36761.883 257.13132 257.13132 161100.83 161100.83 999.41336 999.41336 Loop time of 104.756 on 1 procs for 1000 steps with 8000 atoms Performance: 0.825 ns/day, 29.099 hours/ns, 9.546 timesteps/s 50.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 104.09 | 104.09 | 104.09 | 0.0 | 99.36 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.063963 | 0.063963 | 0.063963 | 0.0 | 0.06 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.56743 | 0.56743 | 0.56743 | 0.0 | 0.54 Other | | 0.03491 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224032 ave 224032 max 224032 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224032 Ave neighs/atom = 28.004 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.333415907522, Press = -2.71842105358584 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -36496.022 -36496.022 -36761.883 -36761.883 257.13132 257.13132 161100.83 161100.83 999.41336 999.41336 13000 -36505.583 -36505.583 -36762.35 -36762.35 248.33591 248.33591 161334.92 161334.92 -491.02567 -491.02567 Loop time of 101.654 on 1 procs for 1000 steps with 8000 atoms Performance: 0.850 ns/day, 28.237 hours/ns, 9.837 timesteps/s 52.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 100.85 | 100.85 | 100.85 | 0.0 | 99.21 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.064702 | 0.064702 | 0.064702 | 0.0 | 0.06 Output | 4.3869e-05 | 4.3869e-05 | 4.3869e-05 | 0.0 | 0.00 Modify | 0.66513 | 0.66513 | 0.66513 | 0.0 | 0.65 Other | | 0.0755 | | | 0.07 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224038 ave 224038 max 224038 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224038 Ave neighs/atom = 28.0048 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.362931566667, Press = -1.41982229654042 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -36505.583 -36505.583 -36762.35 -36762.35 248.33591 248.33591 161334.92 161334.92 -491.02567 -491.02567 14000 -36507.885 -36507.885 -36767.612 -36767.612 251.19832 251.19832 161193.16 161193.16 368.20923 368.20923 Loop time of 98.8684 on 1 procs for 1000 steps with 8000 atoms Performance: 0.874 ns/day, 27.463 hours/ns, 10.114 timesteps/s 53.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 98.101 | 98.101 | 98.101 | 0.0 | 99.22 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.044321 | 0.044321 | 0.044321 | 0.0 | 0.04 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.6883 | 0.6883 | 0.6883 | 0.0 | 0.70 Other | | 0.03483 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224018 ave 224018 max 224018 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224018 Ave neighs/atom = 28.0023 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.33220625071, Press = -0.862498513604146 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -36507.885 -36507.885 -36767.612 -36767.612 251.19832 251.19832 161193.16 161193.16 368.20923 368.20923 15000 -36499.31 -36499.31 -36763.813 -36763.813 255.81733 255.81733 161297.8 161297.8 -260.71783 -260.71783 Loop time of 98.5992 on 1 procs for 1000 steps with 8000 atoms Performance: 0.876 ns/day, 27.389 hours/ns, 10.142 timesteps/s 53.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 97.955 | 97.955 | 97.955 | 0.0 | 99.35 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.072948 | 0.072948 | 0.072948 | 0.0 | 0.07 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.51627 | 0.51627 | 0.51627 | 0.0 | 0.52 Other | | 0.05493 | | | 0.06 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224026 ave 224026 max 224026 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224026 Ave neighs/atom = 28.0033 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.233744403444, Press = -1.98256866714308 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -36499.31 -36499.31 -36763.813 -36763.813 255.81733 255.81733 161297.8 161297.8 -260.71783 -260.71783 16000 -36501.076 -36501.076 -36761.251 -36761.251 251.63221 251.63221 161206.51 161206.51 239.73496 239.73496 Loop time of 97.0851 on 1 procs for 1000 steps with 8000 atoms Performance: 0.890 ns/day, 26.968 hours/ns, 10.300 timesteps/s 54.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 96.329 | 96.329 | 96.329 | 0.0 | 99.22 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.084248 | 0.084248 | 0.084248 | 0.0 | 0.09 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.63696 | 0.63696 | 0.63696 | 0.0 | 0.66 Other | | 0.03463 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224036 ave 224036 max 224036 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224036 Ave neighs/atom = 28.0045 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.224899042265, Press = 0.264178867655565 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -36501.076 -36501.076 -36761.251 -36761.251 251.63221 251.63221 161206.51 161206.51 239.73496 239.73496 17000 -36497.159 -36497.159 -36760.143 -36760.143 254.34841 254.34841 161274.43 161274.43 -92.493389 -92.493389 Loop time of 97.2571 on 1 procs for 1000 steps with 8000 atoms Performance: 0.888 ns/day, 27.016 hours/ns, 10.282 timesteps/s 54.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 96.449 | 96.449 | 96.449 | 0.0 | 99.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.094569 | 0.094569 | 0.094569 | 0.0 | 0.10 Output | 4.5061e-05 | 4.5061e-05 | 4.5061e-05 | 0.0 | 0.00 Modify | 0.59875 | 0.59875 | 0.59875 | 0.0 | 0.62 Other | | 0.1152 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224028 ave 224028 max 224028 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224028 Ave neighs/atom = 28.0035 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.201060487228, Press = -3.70677154342863 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -36497.159 -36497.159 -36760.143 -36760.143 254.34841 254.34841 161274.43 161274.43 -92.493389 -92.493389 18000 -36506.705 -36506.705 -36765.698 -36765.698 250.48835 250.48835 161304.17 161304.17 -358.15646 -358.15646 Loop time of 102.206 on 1 procs for 1000 steps with 8000 atoms Performance: 0.845 ns/day, 28.391 hours/ns, 9.784 timesteps/s 51.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 101.37 | 101.37 | 101.37 | 0.0 | 99.18 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.13364 | 0.13364 | 0.13364 | 0.0 | 0.13 Output | 4.3154e-05 | 4.3154e-05 | 4.3154e-05 | 0.0 | 0.00 Modify | 0.66653 | 0.66653 | 0.66653 | 0.0 | 0.65 Other | | 0.03443 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224026 ave 224026 max 224026 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224026 Ave neighs/atom = 28.0033 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.189014353205, Press = 0.375229567542124 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -36506.705 -36506.705 -36765.698 -36765.698 250.48835 250.48835 161304.17 161304.17 -358.15646 -358.15646 19000 -36498.283 -36498.283 -36763.71 -36763.71 256.7111 256.7111 161201.15 161201.15 298.31316 298.31316 Loop time of 114.616 on 1 procs for 1000 steps with 8000 atoms Performance: 0.754 ns/day, 31.838 hours/ns, 8.725 timesteps/s 45.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.59 | 113.59 | 113.59 | 0.0 | 99.10 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10352 | 0.10352 | 0.10352 | 0.0 | 0.09 Output | 4.5061e-05 | 4.5061e-05 | 4.5061e-05 | 0.0 | 0.00 Modify | 0.83069 | 0.83069 | 0.83069 | 0.0 | 0.72 Other | | 0.09392 | | | 0.08 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224020 ave 224020 max 224020 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224020 Ave neighs/atom = 28.0025 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.128977864595, Press = -1.43167471369689 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -36498.283 -36498.283 -36763.71 -36763.71 256.7111 256.7111 161201.15 161201.15 298.31316 298.31316 20000 -36510.621 -36510.621 -36766.713 -36766.713 247.68222 247.68222 161316.66 161316.66 -503.32015 -503.32015 Loop time of 119.37 on 1 procs for 1000 steps with 8000 atoms Performance: 0.724 ns/day, 33.158 hours/ns, 8.377 timesteps/s 43.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 118.55 | 118.55 | 118.55 | 0.0 | 99.31 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.083081 | 0.083081 | 0.083081 | 0.0 | 0.07 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.68045 | 0.68045 | 0.68045 | 0.0 | 0.57 Other | | 0.05419 | | | 0.05 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224030 ave 224030 max 224030 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224030 Ave neighs/atom = 28.0038 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.083494727829, Press = -0.58799475238312 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -36510.621 -36510.621 -36766.713 -36766.713 247.68222 247.68222 161316.66 161316.66 -503.32015 -503.32015 21000 -36501.05 -36501.05 -36763.03 -36763.03 253.37721 253.37721 161131.17 161131.17 765.95585 765.95585 Loop time of 136.286 on 1 procs for 1000 steps with 8000 atoms Performance: 0.634 ns/day, 37.857 hours/ns, 7.338 timesteps/s 38.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 135.22 | 135.22 | 135.22 | 0.0 | 99.22 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.082902 | 0.082902 | 0.082902 | 0.0 | 0.06 Output | 4.3154e-05 | 4.3154e-05 | 4.3154e-05 | 0.0 | 0.00 Modify | 0.91242 | 0.91242 | 0.91242 | 0.0 | 0.67 Other | | 0.07221 | | | 0.05 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224028 ave 224028 max 224028 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224028 Ave neighs/atom = 28.0035 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.036251963523, Press = -0.548606195221822 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -36501.05 -36501.05 -36763.03 -36763.03 253.37721 253.37721 161131.17 161131.17 765.95585 765.95585 22000 -36504.276 -36504.276 -36765.243 -36765.243 252.3977 252.3977 161383.14 161383.14 -865.52268 -865.52268 Loop time of 135.688 on 1 procs for 1000 steps with 8000 atoms Performance: 0.637 ns/day, 37.691 hours/ns, 7.370 timesteps/s 38.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.7 | 134.7 | 134.7 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10192 | 0.10192 | 0.10192 | 0.0 | 0.08 Output | 5.6028e-05 | 5.6028e-05 | 5.6028e-05 | 0.0 | 0.00 Modify | 0.79522 | 0.79522 | 0.79522 | 0.0 | 0.59 Other | | 0.09352 | | | 0.07 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224038 ave 224038 max 224038 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224038 Ave neighs/atom = 28.0048 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.010090234635, Press = -1.47313512094738 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -36504.276 -36504.276 -36765.243 -36765.243 252.3977 252.3977 161383.14 161383.14 -865.52268 -865.52268 23000 -36501.188 -36501.188 -36764.604 -36764.604 254.76611 254.76611 161147.83 161147.83 668.0737 668.0737 Loop time of 133.734 on 1 procs for 1000 steps with 8000 atoms Performance: 0.646 ns/day, 37.148 hours/ns, 7.478 timesteps/s 39.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 132.58 | 132.58 | 132.58 | 0.0 | 99.14 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12594 | 0.12594 | 0.12594 | 0.0 | 0.09 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.9108 | 0.9108 | 0.9108 | 0.0 | 0.68 Other | | 0.114 | | | 0.09 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224034 ave 224034 max 224034 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224034 Ave neighs/atom = 28.0042 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.055390340261, Press = 0.903697763647478 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -36501.188 -36501.188 -36764.604 -36764.604 254.76611 254.76611 161147.83 161147.83 668.0737 668.0737 24000 -36505.588 -36505.588 -36762.529 -36762.529 248.50366 248.50366 161255.67 161255.67 -40.687773 -40.687773 Loop time of 122.125 on 1 procs for 1000 steps with 8000 atoms Performance: 0.707 ns/day, 33.924 hours/ns, 8.188 timesteps/s 43.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 121.28 | 121.28 | 121.28 | 0.0 | 99.31 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.084229 | 0.084229 | 0.084229 | 0.0 | 0.07 Output | 4.3869e-05 | 4.3869e-05 | 4.3869e-05 | 0.0 | 0.00 Modify | 0.66824 | 0.66824 | 0.66824 | 0.0 | 0.55 Other | | 0.09318 | | | 0.08 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224028 ave 224028 max 224028 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224028 Ave neighs/atom = 28.0035 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.07638066397, Press = -1.34732667591479 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -36505.588 -36505.588 -36762.529 -36762.529 248.50366 248.50366 161255.67 161255.67 -40.687773 -40.687773 25000 -36497.807 -36497.807 -36762.719 -36762.719 256.21372 256.21372 161285.22 161285.22 -175.52906 -175.52906 Loop time of 112.741 on 1 procs for 1000 steps with 8000 atoms Performance: 0.766 ns/day, 31.317 hours/ns, 8.870 timesteps/s 46.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 112.03 | 112.03 | 112.03 | 0.0 | 99.37 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.083699 | 0.083699 | 0.083699 | 0.0 | 0.07 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.55746 | 0.55746 | 0.55746 | 0.0 | 0.49 Other | | 0.07414 | | | 0.07 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224016 ave 224016 max 224016 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224016 Ave neighs/atom = 28.002 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 161253.354728247 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0