# Variables that can be adjusted by kim-lammps-preprocessor to switch unit sets for # Simulator Models variable _u_distance equal 1.0 variable _u_energy equal 1.0 variable _u_mass equal 1.0 variable _u_time equal 1.0 variable _u_pressure equal 1.0 variable _u_temperature equal 1.0 # This line may be swapped out by kim-lammps-preprocessor if running against a Simulator # Model whose atom_style is not 'atomic' atom_style atomic # periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.433560132980347*${_u_distance} variable latticeconst_converted equal 5.433560132980347*1 lattice diamond ${latticeconst_converted} lattice diamond 5.43356013298035 Lattice spacing in x,y,z = 5.43356 5.43356 5.43356 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (54.3356 54.3356 54.3356) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms create_atoms CPU = 0.0230269 secs variable mass_converted equal 28.0855*${_u_mass} variable mass_converted equal 28.0855*1 # specify which KIM Model to use pair_style kim ThreeBodyBondOrder_PPM_PurjaPunMishin_2017_Si__MO_566683736730_000 WARNING: KIM Model does not provide `partialParticleVirial'; virial per atom will be zero (src/KIM/pair_kim.cpp:1089) pair_coeff * * Si mass 1 ${mass_converted} mass 1 28.0855 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 160418.124008228 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 160418.124008228/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 160418.124008228/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 160418.124008228/(1*1*${_u_distance}) variable V0_metal equal 160418.124008228/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 160418.124008228*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 160418.124008228 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 5.20569 ghost atom cutoff = 5.20569 binsize = 2.60285, bins = 21 21 21 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 5.20569 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -36716.217 -36716.217 -37039.999 -37039.999 313.15 313.15 160418.12 160418.12 2155.8526 2155.8526 1000 -36339.404 -36339.404 -36674.79 -36674.79 324.37261 324.37261 161387.06 161387.06 679.43002 679.43002 Loop time of 114.288 on 1 procs for 1000 steps with 8000 atoms Performance: 0.756 ns/day, 31.747 hours/ns, 8.750 timesteps/s 44.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 113.38 | 113.38 | 113.38 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12486 | 0.12486 | 0.12486 | 0.0 | 0.11 Output | 5.4836e-05 | 5.4836e-05 | 5.4836e-05 | 0.0 | 0.00 Modify | 0.72068 | 0.72068 | 0.72068 | 0.0 | 0.63 Other | | 0.06449 | | | 0.06 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224000 ave 224000 max 224000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224000 Ave neighs/atom = 28 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -36339.404 -36339.404 -36674.79 -36674.79 324.37261 324.37261 161387.06 161387.06 679.43002 679.43002 2000 -36376.848 -36376.848 -36697.574 -36697.574 310.19407 310.19407 161412.69 161412.69 179.12574 179.12574 Loop time of 116.966 on 1 procs for 1000 steps with 8000 atoms Performance: 0.739 ns/day, 32.491 hours/ns, 8.549 timesteps/s 45.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 116.15 | 116.15 | 116.15 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1437 | 0.1437 | 0.1437 | 0.0 | 0.12 Output | 4.5061e-05 | 4.5061e-05 | 4.5061e-05 | 0.0 | 0.00 Modify | 0.61092 | 0.61092 | 0.61092 | 0.0 | 0.52 Other | | 0.06432 | | | 0.05 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224114 ave 224114 max 224114 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224114 Ave neighs/atom = 28.0143 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -36376.848 -36376.848 -36697.574 -36697.574 310.19407 310.19407 161412.69 161412.69 179.12574 179.12574 3000 -36356.715 -36356.715 -36683.142 -36683.142 315.70731 315.70731 161489.46 161489.46 -181.50074 -181.50074 Loop time of 116.497 on 1 procs for 1000 steps with 8000 atoms Performance: 0.742 ns/day, 32.360 hours/ns, 8.584 timesteps/s 45.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 115.55 | 115.55 | 115.55 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.043766 | 0.043766 | 0.043766 | 0.0 | 0.04 Output | 5.2929e-05 | 5.2929e-05 | 5.2929e-05 | 0.0 | 0.00 Modify | 0.81097 | 0.81097 | 0.81097 | 0.0 | 0.70 Other | | 0.09446 | | | 0.08 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224086 ave 224086 max 224086 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224086 Ave neighs/atom = 28.0108 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -36356.715 -36356.715 -36683.142 -36683.142 315.70731 315.70731 161489.46 161489.46 -181.50074 -181.50074 4000 -36370.17 -36370.17 -36687.368 -36687.368 306.78169 306.78169 161494.87 161494.87 -277.18348 -277.18348 Loop time of 116.88 on 1 procs for 1000 steps with 8000 atoms Performance: 0.739 ns/day, 32.467 hours/ns, 8.556 timesteps/s 45.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 115.95 | 115.95 | 115.95 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.044204 | 0.044204 | 0.044204 | 0.0 | 0.04 Output | 5.5075e-05 | 5.5075e-05 | 5.5075e-05 | 0.0 | 0.00 Modify | 0.77091 | 0.77091 | 0.77091 | 0.0 | 0.66 Other | | 0.1147 | | | 0.10 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224112 ave 224112 max 224112 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224112 Ave neighs/atom = 28.014 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -36370.17 -36370.17 -36687.368 -36687.368 306.78169 306.78169 161494.87 161494.87 -277.18348 -277.18348 5000 -36358.392 -36358.392 -36684.362 -36684.362 315.2668 315.2668 161599.69 161599.69 -678.51252 -678.51252 Loop time of 116.136 on 1 procs for 1000 steps with 8000 atoms Performance: 0.744 ns/day, 32.260 hours/ns, 8.611 timesteps/s 45.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 115.31 | 115.31 | 115.31 | 0.0 | 99.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10435 | 0.10435 | 0.10435 | 0.0 | 0.09 Output | 4.5061e-05 | 4.5061e-05 | 4.5061e-05 | 0.0 | 0.00 Modify | 0.64084 | 0.64084 | 0.64084 | 0.0 | 0.55 Other | | 0.08501 | | | 0.07 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224104 ave 224104 max 224104 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224104 Ave neighs/atom = 28.013 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 317.151168682261, Press = -209.192209785434 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -36358.392 -36358.392 -36684.362 -36684.362 315.2668 315.2668 161599.69 161599.69 -678.51252 -678.51252 6000 -36368.043 -36368.043 -36687.389 -36687.389 308.85997 308.85997 161607.38 161607.38 -960.93722 -960.93722 Loop time of 109.42 on 1 procs for 1000 steps with 8000 atoms Performance: 0.790 ns/day, 30.394 hours/ns, 9.139 timesteps/s 48.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 108.69 | 108.69 | 108.69 | 0.0 | 99.33 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.044425 | 0.044425 | 0.044425 | 0.0 | 0.04 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.58987 | 0.58987 | 0.58987 | 0.0 | 0.54 Other | | 0.09543 | | | 0.09 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224076 ave 224076 max 224076 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224076 Ave neighs/atom = 28.0095 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.173852527978, Press = -1.25972008866439 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -36368.043 -36368.043 -36687.389 -36687.389 308.85997 308.85997 161607.38 161607.38 -960.93722 -960.93722 7000 -36358.901 -36358.901 -36684.294 -36684.294 314.70788 314.70788 161500.57 161500.57 -196.85329 -196.85329 Loop time of 127.334 on 1 procs for 1000 steps with 8000 atoms Performance: 0.679 ns/day, 35.370 hours/ns, 7.853 timesteps/s 41.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 126.4 | 126.4 | 126.4 | 0.0 | 99.27 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12325 | 0.12325 | 0.12325 | 0.0 | 0.10 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.7525 | 0.7525 | 0.7525 | 0.0 | 0.59 Other | | 0.05409 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224088 ave 224088 max 224088 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224088 Ave neighs/atom = 28.011 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.298678614596, Press = 3.43949779307107 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -36358.901 -36358.901 -36684.294 -36684.294 314.70788 314.70788 161500.57 161500.57 -196.85329 -196.85329 8000 -36365.059 -36365.059 -36689.103 -36689.103 313.40338 313.40338 161488.75 161488.75 -154.79826 -154.79826 Loop time of 128.897 on 1 procs for 1000 steps with 8000 atoms Performance: 0.670 ns/day, 35.805 hours/ns, 7.758 timesteps/s 41.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.87 | 127.87 | 127.87 | 0.0 | 99.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.083614 | 0.083614 | 0.083614 | 0.0 | 0.06 Output | 5.3883e-05 | 5.3883e-05 | 5.3883e-05 | 0.0 | 0.00 Modify | 0.85377 | 0.85377 | 0.85377 | 0.0 | 0.66 Other | | 0.09399 | | | 0.07 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4999 ave 4999 max 4999 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224108 ave 224108 max 224108 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224108 Ave neighs/atom = 28.0135 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.156344830789, Press = 1.01146515904186 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -36365.059 -36365.059 -36689.103 -36689.103 313.40338 313.40338 161488.75 161488.75 -154.79826 -154.79826 9000 -36356.937 -36356.937 -36681.666 -36681.666 314.06652 314.06652 161492.51 161492.51 -199.16098 -199.16098 Loop time of 123.77 on 1 procs for 1000 steps with 8000 atoms Performance: 0.698 ns/day, 34.381 hours/ns, 8.079 timesteps/s 42.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 122.77 | 122.77 | 122.77 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11919 | 0.11919 | 0.11919 | 0.0 | 0.10 Output | 8.7976e-05 | 8.7976e-05 | 8.7976e-05 | 0.0 | 0.00 Modify | 0.7644 | 0.7644 | 0.7644 | 0.0 | 0.62 Other | | 0.114 | | | 0.09 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224078 ave 224078 max 224078 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224078 Ave neighs/atom = 28.0098 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.242440786094, Press = 1.44844829599792 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -36356.937 -36356.937 -36681.666 -36681.666 314.06652 314.06652 161492.51 161492.51 -199.16098 -199.16098 10000 -36367.894 -36367.894 -36692.476 -36692.476 313.92426 313.92426 161475.51 161475.51 -173.427 -173.427 Loop time of 121.462 on 1 procs for 1000 steps with 8000 atoms Performance: 0.711 ns/day, 33.739 hours/ns, 8.233 timesteps/s 43.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 120.46 | 120.46 | 120.46 | 0.0 | 99.17 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.083238 | 0.083238 | 0.083238 | 0.0 | 0.07 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.86734 | 0.86734 | 0.86734 | 0.0 | 0.71 Other | | 0.05401 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224112 ave 224112 max 224112 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224112 Ave neighs/atom = 28.014 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.157866023703, Press = 0.904809982160967 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -36367.894 -36367.894 -36692.476 -36692.476 313.92426 313.92426 161475.51 161475.51 -173.427 -173.427 11000 -36371.272 -36371.272 -36694.871 -36694.871 312.97332 312.97332 161420.55 161420.55 214.75084 214.75084 Loop time of 111.737 on 1 procs for 1000 steps with 8000 atoms Performance: 0.773 ns/day, 31.038 hours/ns, 8.950 timesteps/s 47.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 110.98 | 110.98 | 110.98 | 0.0 | 99.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.14072 | 0.14072 | 0.14072 | 0.0 | 0.13 Output | 4.6968e-05 | 4.6968e-05 | 4.6968e-05 | 0.0 | 0.00 Modify | 0.58563 | 0.58563 | 0.58563 | 0.0 | 0.52 Other | | 0.034 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224096 ave 224096 max 224096 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224096 Ave neighs/atom = 28.012 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.176926301674, Press = 0.430201488195926 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -36371.272 -36371.272 -36694.871 -36694.871 312.97332 312.97332 161420.55 161420.55 214.75084 214.75084 12000 -36364.497 -36364.497 -36689.603 -36689.603 314.4309 314.4309 161426.3 161426.3 218.69621 218.69621 Loop time of 99.1646 on 1 procs for 1000 steps with 8000 atoms Performance: 0.871 ns/day, 27.546 hours/ns, 10.084 timesteps/s 53.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 98.399 | 98.399 | 98.399 | 0.0 | 99.23 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.085374 | 0.085374 | 0.085374 | 0.0 | 0.09 Output | 4.3154e-05 | 4.3154e-05 | 4.3154e-05 | 0.0 | 0.00 Modify | 0.62789 | 0.62789 | 0.62789 | 0.0 | 0.63 Other | | 0.05192 | | | 0.05 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224092 ave 224092 max 224092 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224092 Ave neighs/atom = 28.0115 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.133993403629, Press = -1.17901912820045 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -36364.497 -36364.497 -36689.603 -36689.603 314.4309 314.4309 161426.3 161426.3 218.69621 218.69621 13000 -36372.075 -36372.075 -36692.814 -36692.814 310.20701 310.20701 161433.85 161433.85 88.62761 88.62761 Loop time of 103.591 on 1 procs for 1000 steps with 8000 atoms Performance: 0.834 ns/day, 28.775 hours/ns, 9.653 timesteps/s 51.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 102.79 | 102.79 | 102.79 | 0.0 | 99.23 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.063791 | 0.063791 | 0.063791 | 0.0 | 0.06 Output | 3.6955e-05 | 3.6955e-05 | 3.6955e-05 | 0.0 | 0.00 Modify | 0.68403 | 0.68403 | 0.68403 | 0.0 | 0.66 Other | | 0.05422 | | | 0.05 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224096 ave 224096 max 224096 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224096 Ave neighs/atom = 28.012 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.970096450768, Press = -1.47470050745257 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -36372.075 -36372.075 -36692.814 -36692.814 310.20701 310.20701 161433.85 161433.85 88.62761 88.62761 14000 -36356.549 -36356.549 -36685.265 -36685.265 317.92172 317.92172 161471.81 161471.81 -35.953837 -35.953837 Loop time of 97.2804 on 1 procs for 1000 steps with 8000 atoms Performance: 0.888 ns/day, 27.022 hours/ns, 10.280 timesteps/s 54.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 96.576 | 96.576 | 96.576 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.11429 | 0.11429 | 0.11429 | 0.0 | 0.12 Output | 4.5061e-05 | 4.5061e-05 | 4.5061e-05 | 0.0 | 0.00 Modify | 0.55503 | 0.55503 | 0.55503 | 0.0 | 0.57 Other | | 0.03498 | | | 0.04 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224086 ave 224086 max 224086 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224086 Ave neighs/atom = 28.0108 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.049489222476, Press = -1.07453624278763 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -36356.549 -36356.549 -36685.265 -36685.265 317.92172 317.92172 161471.81 161471.81 -35.953837 -35.953837 15000 -36372.199 -36372.199 -36695.856 -36695.856 313.02852 313.02852 161443.52 161443.52 -46.273188 -46.273188 Loop time of 95.2322 on 1 procs for 1000 steps with 8000 atoms Performance: 0.907 ns/day, 26.453 hours/ns, 10.501 timesteps/s 55.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 94.547 | 94.547 | 94.547 | 0.0 | 99.28 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.0642 | 0.0642 | 0.0642 | 0.0 | 0.07 Output | 5.9843e-05 | 5.9843e-05 | 5.9843e-05 | 0.0 | 0.00 Modify | 0.56659 | 0.56659 | 0.56659 | 0.0 | 0.59 Other | | 0.05475 | | | 0.06 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224086 ave 224086 max 224086 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224086 Ave neighs/atom = 28.0108 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.089138939177, Press = -0.962854233626564 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -36372.199 -36372.199 -36695.856 -36695.856 313.02852 313.02852 161443.52 161443.52 -46.273188 -46.273188 16000 -36367.682 -36367.682 -36691.64 -36691.64 313.3199 313.3199 161475.2 161475.2 -78.634464 -78.634464 Loop time of 92.7485 on 1 procs for 1000 steps with 8000 atoms Performance: 0.932 ns/day, 25.763 hours/ns, 10.782 timesteps/s 57.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 91.968 | 91.968 | 91.968 | 0.0 | 99.16 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12554 | 0.12554 | 0.12554 | 0.0 | 0.14 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.59878 | 0.59878 | 0.59878 | 0.0 | 0.65 Other | | 0.05569 | | | 0.06 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224092 ave 224092 max 224092 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224092 Ave neighs/atom = 28.0115 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.174168892124, Press = -0.96040473549209 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -36367.682 -36367.682 -36691.64 -36691.64 313.3199 313.3199 161475.2 161475.2 -78.634464 -78.634464 17000 -36367.94 -36367.94 -36689.833 -36689.833 311.32311 311.32311 161507.59 161507.59 -271.75811 -271.75811 Loop time of 98.7393 on 1 procs for 1000 steps with 8000 atoms Performance: 0.875 ns/day, 27.428 hours/ns, 10.128 timesteps/s 53.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 97.998 | 97.998 | 97.998 | 0.0 | 99.25 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10697 | 0.10697 | 0.10697 | 0.0 | 0.11 Output | 4.4107e-05 | 4.4107e-05 | 4.4107e-05 | 0.0 | 0.00 Modify | 0.559 | 0.559 | 0.559 | 0.0 | 0.57 Other | | 0.07501 | | | 0.08 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224076 ave 224076 max 224076 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224076 Ave neighs/atom = 28.0095 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.269470299456, Press = -0.940833631419684 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -36367.94 -36367.94 -36689.833 -36689.833 311.32311 311.32311 161507.59 161507.59 -271.75811 -271.75811 18000 -36369.56 -36369.56 -36686.33 -36686.33 306.36803 306.36803 161570.93 161570.93 -724.11941 -724.11941 Loop time of 104.661 on 1 procs for 1000 steps with 8000 atoms Performance: 0.826 ns/day, 29.073 hours/ns, 9.555 timesteps/s 50.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 103.78 | 103.78 | 103.78 | 0.0 | 99.16 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10446 | 0.10446 | 0.10446 | 0.0 | 0.10 Output | 4.3154e-05 | 4.3154e-05 | 4.3154e-05 | 0.0 | 0.00 Modify | 0.66212 | 0.66212 | 0.66212 | 0.0 | 0.63 Other | | 0.115 | | | 0.11 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224096 ave 224096 max 224096 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224096 Ave neighs/atom = 28.012 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.25778679177, Press = -0.600592966994462 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -36369.56 -36369.56 -36686.33 -36686.33 306.36803 306.36803 161570.93 161570.93 -724.11941 -724.11941 19000 -36364.321 -36364.321 -36689.487 -36689.487 314.4887 314.4887 161553.51 161553.51 -515.23094 -515.23094 Loop time of 112.238 on 1 procs for 1000 steps with 8000 atoms Performance: 0.770 ns/day, 31.177 hours/ns, 8.910 timesteps/s 46.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 111.33 | 111.33 | 111.33 | 0.0 | 99.19 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.062687 | 0.062687 | 0.062687 | 0.0 | 0.06 Output | 5.2929e-05 | 5.2929e-05 | 5.2929e-05 | 0.0 | 0.00 Modify | 0.77187 | 0.77187 | 0.77187 | 0.0 | 0.69 Other | | 0.07361 | | | 0.07 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224084 ave 224084 max 224084 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224084 Ave neighs/atom = 28.0105 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.223468639934, Press = 0.510942795275236 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -36364.321 -36364.321 -36689.487 -36689.487 314.4887 314.4887 161553.51 161553.51 -515.23094 -515.23094 20000 -36367.855 -36367.855 -36691.811 -36691.811 313.31804 313.31804 161468.94 161468.94 -118.94469 -118.94469 Loop time of 118.62 on 1 procs for 1000 steps with 8000 atoms Performance: 0.728 ns/day, 32.950 hours/ns, 8.430 timesteps/s 44.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 117.8 | 117.8 | 117.8 | 0.0 | 99.31 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.083581 | 0.083581 | 0.083581 | 0.0 | 0.07 Output | 4.3869e-05 | 4.3869e-05 | 4.3869e-05 | 0.0 | 0.00 Modify | 0.70389 | 0.70389 | 0.70389 | 0.0 | 0.59 Other | | 0.03382 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224074 ave 224074 max 224074 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224074 Ave neighs/atom = 28.0093 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.1230982925, Press = 0.897226158881313 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -36367.855 -36367.855 -36691.811 -36691.811 313.31804 313.31804 161468.94 161468.94 -118.94469 -118.94469 21000 -36369.325 -36369.325 -36695.557 -36695.557 315.51889 315.51889 161361.6 161361.6 587.92296 587.92296 Loop time of 136.355 on 1 procs for 1000 steps with 8000 atoms Performance: 0.634 ns/day, 37.876 hours/ns, 7.334 timesteps/s 38.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 135.5 | 135.5 | 135.5 | 0.0 | 99.37 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.082829 | 0.082829 | 0.082829 | 0.0 | 0.06 Output | 4.6015e-05 | 4.6015e-05 | 4.6015e-05 | 0.0 | 0.00 Modify | 0.68748 | 0.68748 | 0.68748 | 0.0 | 0.50 Other | | 0.08329 | | | 0.06 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224068 ave 224068 max 224068 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224068 Ave neighs/atom = 28.0085 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.100600819316, Press = 1.55614813403575 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -36369.325 -36369.325 -36695.557 -36695.557 315.51889 315.51889 161361.6 161361.6 587.92296 587.92296 22000 -36355.071 -36355.071 -36684.364 -36684.364 318.47936 318.47936 161269.09 161269.09 1262.258 1262.258 Loop time of 137.916 on 1 procs for 1000 steps with 8000 atoms Performance: 0.626 ns/day, 38.310 hours/ns, 7.251 timesteps/s 38.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 136.85 | 136.85 | 136.85 | 0.0 | 99.22 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.094662 | 0.094662 | 0.094662 | 0.0 | 0.07 Output | 6.3896e-05 | 6.3896e-05 | 6.3896e-05 | 0.0 | 0.00 Modify | 0.86168 | 0.86168 | 0.86168 | 0.0 | 0.62 Other | | 0.1139 | | | 0.08 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224078 ave 224078 max 224078 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224078 Ave neighs/atom = 28.0098 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.056296526187, Press = 1.03445302149197 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 4.227 | 4.227 | 4.227 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -36355.071 -36355.071 -36684.364 -36684.364 318.47936 318.47936 161269.09 161269.09 1262.258 1262.258 23000 -36363.541 -36363.541 -36686.416 -36686.416 312.27306 312.27306 161346.82 161346.82 637.75372 637.75372 Loop time of 137.339 on 1 procs for 1000 steps with 8000 atoms Performance: 0.629 ns/day, 38.150 hours/ns, 7.281 timesteps/s 38.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 136.38 | 136.38 | 136.38 | 0.0 | 99.30 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.12602 | 0.12602 | 0.12602 | 0.0 | 0.09 Output | 4.4823e-05 | 4.4823e-05 | 4.4823e-05 | 0.0 | 0.00 Modify | 0.70183 | 0.70183 | 0.70183 | 0.0 | 0.51 Other | | 0.1336 | | | 0.10 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 4995 ave 4995 max 4995 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 224164 ave 224164 max 224164 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 224164 Ave neighs/atom = 28.0205 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 161456.64598952 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0