# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.427092507481575*${_u_distance} variable latticeconst_converted equal 5.427092507481575*1 lattice diamond ${latticeconst_converted} lattice diamond 5.42709250748158 Lattice spacing in x,y,z = 5.4270925 5.4270925 5.4270925 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (54.270925 54.270925 54.270925) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0.0000000 0.0000000 0.0000000) to (54.270925 54.270925 54.270925) create_atoms CPU = 0.006 seconds variable mass_converted equal 28.0855*${_u_mass} variable mass_converted equal 28.0855*1 kim_interactions Si WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Si #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_Lee_2007_Si__MO_774917820956_000 pair_coeff * * Si #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 28.0855 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 159845.963304675 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 159845.963304675/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 159845.963304675/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 159845.963304675/(1*1*${_u_distance}) variable V0_metal equal 159845.963304675/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 159845.963304675*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 159845.963304675 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_774917820956_000#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.677 | 4.677 | 4.677 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -36716.218 -36716.218 -37040 -37040 313.15 313.15 159845.96 159845.96 2163.5619 2163.5619 1000 -36363.968 -36363.968 -36705.746 -36705.746 330.55487 330.55487 160508.26 160508.26 345.33906 345.33906 Loop time of 141.817 on 1 procs for 1000 steps with 8000 atoms Performance: 0.609 ns/day, 39.394 hours/ns, 7.051 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 140.16 | 140.16 | 140.16 | 0.0 | 98.83 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20665 | 0.20665 | 0.20665 | 0.0 | 0.15 Output | 0.00027059 | 0.00027059 | 0.00027059 | 0.0 | 0.00 Modify | 1.2894 | 1.2894 | 1.2894 | 0.0 | 0.91 Other | | 0.1588 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 368000.0 ave 368000 max 368000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 368000 Ave neighs/atom = 46.000000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -36363.968 -36363.968 -36705.746 -36705.746 330.55487 330.55487 160508.26 160508.26 345.33906 345.33906 2000 -36398.673 -36398.673 -36708.008 -36708.008 299.17662 299.17662 160562.44 160562.44 -68.347346 -68.347346 Loop time of 142.065 on 1 procs for 1000 steps with 8000 atoms Performance: 0.608 ns/day, 39.463 hours/ns, 7.039 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 140.43 | 140.43 | 140.43 | 0.0 | 98.85 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.19993 | 0.19993 | 0.19993 | 0.0 | 0.14 Output | 0.00025914 | 0.00025914 | 0.00025914 | 0.0 | 0.00 Modify | 1.2758 | 1.2758 | 1.2758 | 0.0 | 0.90 Other | | 0.1571 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 374204.0 ave 374204 max 374204 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 374204 Ave neighs/atom = 46.775500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -36398.673 -36398.673 -36708.008 -36708.008 299.17662 299.17662 160562.44 160562.44 -68.347346 -68.347346 3000 -36381.394 -36381.394 -36711.776 -36711.776 319.53324 319.53324 160616.17 160616.17 -326.65644 -326.65644 Loop time of 142.573 on 1 procs for 1000 steps with 8000 atoms Performance: 0.606 ns/day, 39.603 hours/ns, 7.014 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 140.92 | 140.92 | 140.92 | 0.0 | 98.84 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20519 | 0.20519 | 0.20519 | 0.0 | 0.14 Output | 0.00026884 | 0.00026884 | 0.00026884 | 0.0 | 0.00 Modify | 1.2845 | 1.2845 | 1.2845 | 0.0 | 0.90 Other | | 0.1581 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 373718.0 ave 373718 max 373718 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 373718 Ave neighs/atom = 46.714750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -36381.394 -36381.394 -36711.776 -36711.776 319.53324 319.53324 160616.17 160616.17 -326.65644 -326.65644 4000 -36389.84 -36389.84 -36711.367 -36711.367 310.96917 310.96917 160585.71 160585.71 -190.13174 -190.13174 Loop time of 143.684 on 1 procs for 1000 steps with 8000 atoms Performance: 0.601 ns/day, 39.912 hours/ns, 6.960 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 142.01 | 142.01 | 142.01 | 0.0 | 98.84 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21248 | 0.21248 | 0.21248 | 0.0 | 0.15 Output | 0.00026834 | 0.00026834 | 0.00026834 | 0.0 | 0.00 Modify | 1.2972 | 1.2972 | 1.2972 | 0.0 | 0.90 Other | | 0.1593 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 373618.0 ave 373618 max 373618 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 373618 Ave neighs/atom = 46.702250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -36389.84 -36389.84 -36711.367 -36711.367 310.96917 310.96917 160585.71 160585.71 -190.13174 -190.13174 5000 -36388.815 -36388.815 -36711.129 -36711.129 311.73059 311.73059 160434.73 160434.73 659.2739 659.2739 Loop time of 160.238 on 1 procs for 1000 steps with 8000 atoms Performance: 0.539 ns/day, 44.510 hours/ns, 6.241 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 158.3 | 158.3 | 158.3 | 0.0 | 98.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23101 | 0.23101 | 0.23101 | 0.0 | 0.14 Output | 0.00023893 | 0.00023893 | 0.00023893 | 0.0 | 0.00 Modify | 1.5264 | 1.5264 | 1.5264 | 0.0 | 0.95 Other | | 0.1758 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 373608.0 ave 373608 max 373608 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 373608 Ave neighs/atom = 46.701000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 314.348448172997, Press = 484.362185982303 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -36388.815 -36388.815 -36711.129 -36711.129 311.73059 311.73059 160434.73 160434.73 659.2739 659.2739 6000 -36384.001 -36384.001 -36702.96 -36702.96 308.48529 308.48529 160468.77 160468.77 418.13535 418.13535 Loop time of 167.425 on 1 procs for 1000 steps with 8000 atoms Performance: 0.516 ns/day, 46.507 hours/ns, 5.973 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 165.34 | 165.34 | 165.34 | 0.0 | 98.75 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23679 | 0.23679 | 0.23679 | 0.0 | 0.14 Output | 0.00031176 | 0.00031176 | 0.00031176 | 0.0 | 0.00 Modify | 1.6636 | 1.6636 | 1.6636 | 0.0 | 0.99 Other | | 0.1841 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 374174.0 ave 374174 max 374174 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 374174 Ave neighs/atom = 46.771750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.73177619766, Press = 15.8532484202093 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -36384.001 -36384.001 -36702.96 -36702.96 308.48529 308.48529 160468.77 160468.77 418.13535 418.13535 7000 -36391.77 -36391.77 -36709.442 -36709.442 307.24089 307.24089 160552.32 160552.32 -132.83385 -132.83385 Loop time of 167.467 on 1 procs for 1000 steps with 8000 atoms Performance: 0.516 ns/day, 46.519 hours/ns, 5.971 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 165.38 | 165.38 | 165.38 | 0.0 | 98.75 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23621 | 0.23621 | 0.23621 | 0.0 | 0.14 Output | 0.00023322 | 0.00023322 | 0.00023322 | 0.0 | 0.00 Modify | 1.6651 | 1.6651 | 1.6651 | 0.0 | 0.99 Other | | 0.1839 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 374680.0 ave 374680 max 374680 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 374680 Ave neighs/atom = 46.835000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.115378269434, Press = 9.04068220956287 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -36391.77 -36391.77 -36709.442 -36709.442 307.24089 307.24089 160552.32 160552.32 -132.83385 -132.83385 8000 -36381.221 -36381.221 -36709.787 -36709.787 317.7774 317.7774 160552.38 160552.38 4.0245039 4.0245039 Loop time of 167.267 on 1 procs for 1000 steps with 8000 atoms Performance: 0.517 ns/day, 46.463 hours/ns, 5.978 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 165.19 | 165.19 | 165.19 | 0.0 | 98.76 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23666 | 0.23666 | 0.23666 | 0.0 | 0.14 Output | 0.00036904 | 0.00036904 | 0.00036904 | 0.0 | 0.00 Modify | 1.6539 | 1.6539 | 1.6539 | 0.0 | 0.99 Other | | 0.1863 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 374050.0 ave 374050 max 374050 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 374050 Ave neighs/atom = 46.756250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.090701759301, Press = 6.36113436651188 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -36381.221 -36381.221 -36709.787 -36709.787 317.7774 317.7774 160552.38 160552.38 4.0245039 4.0245039 9000 -36391.455 -36391.455 -36715.108 -36715.108 313.02501 313.02501 160490.73 160490.73 390.36588 390.36588 Loop time of 167.809 on 1 procs for 1000 steps with 8000 atoms Performance: 0.515 ns/day, 46.614 hours/ns, 5.959 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 165.73 | 165.73 | 165.73 | 0.0 | 98.76 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23861 | 0.23861 | 0.23861 | 0.0 | 0.14 Output | 0.00040829 | 0.00040829 | 0.00040829 | 0.0 | 0.00 Modify | 1.6572 | 1.6572 | 1.6572 | 0.0 | 0.99 Other | | 0.186 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 373766.0 ave 373766 max 373766 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 373766 Ave neighs/atom = 46.720750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.042671436766, Press = 3.81996250074089 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -36391.455 -36391.455 -36715.108 -36715.108 313.02501 313.02501 160490.73 160490.73 390.36588 390.36588 10000 -36384.246 -36384.246 -36715.076 -36715.076 319.9663 319.9663 160498.1 160498.1 428.70332 428.70332 Loop time of 168.046 on 1 procs for 1000 steps with 8000 atoms Performance: 0.514 ns/day, 46.679 hours/ns, 5.951 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 165.95 | 165.95 | 165.95 | 0.0 | 98.75 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2394 | 0.2394 | 0.2394 | 0.0 | 0.14 Output | 0.00031146 | 0.00031146 | 0.00031146 | 0.0 | 0.00 Modify | 1.6707 | 1.6707 | 1.6707 | 0.0 | 0.99 Other | | 0.1851 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 373874.0 ave 373874 max 373874 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 373874 Ave neighs/atom = 46.734250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.163853777154, Press = 1.68017602632561 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -36384.246 -36384.246 -36715.076 -36715.076 319.9663 319.9663 160498.1 160498.1 428.70332 428.70332 11000 -36386.553 -36386.553 -36711.913 -36711.913 314.6762 314.6762 160620.66 160620.66 -399.70436 -399.70436 Loop time of 167.485 on 1 procs for 1000 steps with 8000 atoms Performance: 0.516 ns/day, 46.524 hours/ns, 5.971 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 165.39 | 165.39 | 165.39 | 0.0 | 98.75 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23908 | 0.23908 | 0.23908 | 0.0 | 0.14 Output | 0.00030243 | 0.00030243 | 0.00030243 | 0.0 | 0.00 Modify | 1.666 | 1.666 | 1.666 | 0.0 | 0.99 Other | | 0.1845 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 373626.0 ave 373626 max 373626 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 373626 Ave neighs/atom = 46.703250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.205208118395, Press = -0.405435590795554 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -36386.553 -36386.553 -36711.913 -36711.913 314.6762 314.6762 160620.66 160620.66 -399.70436 -399.70436 12000 -36384.284 -36384.284 -36714.672 -36714.672 319.53918 319.53918 160690.41 160690.41 -646.74067 -646.74067 Loop time of 167.526 on 1 procs for 1000 steps with 8000 atoms Performance: 0.516 ns/day, 46.535 hours/ns, 5.969 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 165.43 | 165.43 | 165.43 | 0.0 | 98.75 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24045 | 0.24045 | 0.24045 | 0.0 | 0.14 Output | 0.00030922 | 0.00030922 | 0.00030922 | 0.0 | 0.00 Modify | 1.6671 | 1.6671 | 1.6671 | 0.0 | 1.00 Other | | 0.1851 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 373478.0 ave 373478 max 373478 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 373478 Ave neighs/atom = 46.684750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.456917744558, Press = 2.55937198923509 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -36384.284 -36384.284 -36714.672 -36714.672 319.53918 319.53918 160690.41 160690.41 -646.74067 -646.74067 13000 -36386.256 -36386.256 -36715 -36715 317.94872 317.94872 160594.96 160594.96 -191.58722 -191.58722 Loop time of 162.018 on 1 procs for 1000 steps with 8000 atoms Performance: 0.533 ns/day, 45.005 hours/ns, 6.172 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 160.02 | 160.02 | 160.02 | 0.0 | 98.77 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23114 | 0.23114 | 0.23114 | 0.0 | 0.14 Output | 0.00022661 | 0.00022661 | 0.00022661 | 0.0 | 0.00 Modify | 1.59 | 1.59 | 1.59 | 0.0 | 0.98 Other | | 0.1795 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 372910.0 ave 372910 max 372910 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 372910 Ave neighs/atom = 46.613750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.395028688886, Press = 5.39873788848172 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -36386.256 -36386.256 -36715 -36715 317.94872 317.94872 160594.96 160594.96 -191.58722 -191.58722 14000 -36391.158 -36391.158 -36715.837 -36715.837 314.01741 314.01741 160483.19 160483.19 459.28415 459.28415 Loop time of 142.824 on 1 procs for 1000 steps with 8000 atoms Performance: 0.605 ns/day, 39.673 hours/ns, 7.002 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 141.14 | 141.14 | 141.14 | 0.0 | 98.82 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20412 | 0.20412 | 0.20412 | 0.0 | 0.14 Output | 0.00022757 | 0.00022757 | 0.00022757 | 0.0 | 0.00 Modify | 1.3185 | 1.3185 | 1.3185 | 0.0 | 0.92 Other | | 0.1588 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 373586.0 ave 373586 max 373586 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 373586 Ave neighs/atom = 46.698250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.316144860681, Press = 2.80631824372858 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -36391.158 -36391.158 -36715.837 -36715.837 314.01741 314.01741 160483.19 160483.19 459.28415 459.28415 15000 -36381.396 -36381.396 -36708.948 -36708.948 316.79613 316.79613 160495.02 160495.02 412.80571 412.80571 Loop time of 142.103 on 1 procs for 1000 steps with 8000 atoms Performance: 0.608 ns/day, 39.473 hours/ns, 7.037 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 140.43 | 140.43 | 140.43 | 0.0 | 98.82 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20088 | 0.20088 | 0.20088 | 0.0 | 0.14 Output | 0.00053127 | 0.00053127 | 0.00053127 | 0.0 | 0.00 Modify | 1.3108 | 1.3108 | 1.3108 | 0.0 | 0.92 Other | | 0.1584 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 373672.0 ave 373672 max 373672 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 373672 Ave neighs/atom = 46.709000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.36612183704, Press = 1.61514888803947 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -36381.396 -36381.396 -36708.948 -36708.948 316.79613 316.79613 160495.02 160495.02 412.80571 412.80571 16000 -36389.548 -36389.548 -36710.01 -36710.01 309.93868 309.93868 160518.74 160518.74 116.88569 116.88569 Loop time of 147.836 on 1 procs for 1000 steps with 8000 atoms Performance: 0.584 ns/day, 41.065 hours/ns, 6.764 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 146.08 | 146.08 | 146.08 | 0.0 | 98.81 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.21097 | 0.21097 | 0.21097 | 0.0 | 0.14 Output | 0.00022826 | 0.00022826 | 0.00022826 | 0.0 | 0.00 Modify | 1.3814 | 1.3814 | 1.3814 | 0.0 | 0.93 Other | | 0.165 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 373938.0 ave 373938 max 373938 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 373938 Ave neighs/atom = 46.742250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.347117689484, Press = 0.824351062411961 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -36389.548 -36389.548 -36710.01 -36710.01 309.93868 309.93868 160518.74 160518.74 116.88569 116.88569 17000 -36382.791 -36382.791 -36705.455 -36705.455 312.06796 312.06796 160597.26 160597.26 -229.18043 -229.18043 Loop time of 143.432 on 1 procs for 1000 steps with 8000 atoms Performance: 0.602 ns/day, 39.842 hours/ns, 6.972 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 141.74 | 141.74 | 141.74 | 0.0 | 98.82 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20618 | 0.20618 | 0.20618 | 0.0 | 0.14 Output | 0.00022969 | 0.00022969 | 0.00022969 | 0.0 | 0.00 Modify | 1.3276 | 1.3276 | 1.3276 | 0.0 | 0.93 Other | | 0.1602 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 374148.0 ave 374148 max 374148 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 374148 Ave neighs/atom = 46.768500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.332518835123, Press = 0.236863567518505 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -36382.791 -36382.791 -36705.455 -36705.455 312.06796 312.06796 160597.26 160597.26 -229.18043 -229.18043 18000 -36387.921 -36387.921 -36708.178 -36708.178 309.74085 309.74085 160758.71 160758.71 -1224.7678 -1224.7678 Loop time of 142.455 on 1 procs for 1000 steps with 8000 atoms Performance: 0.607 ns/day, 39.571 hours/ns, 7.020 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 140.78 | 140.78 | 140.78 | 0.0 | 98.82 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20135 | 0.20135 | 0.20135 | 0.0 | 0.14 Output | 0.00026835 | 0.00026835 | 0.00026835 | 0.0 | 0.00 Modify | 1.3149 | 1.3149 | 1.3149 | 0.0 | 0.92 Other | | 0.1596 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 373906.0 ave 373906 max 373906 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 373906 Ave neighs/atom = 46.738250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.27601148606, Press = 0.45034828071739 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -36387.921 -36387.921 -36708.178 -36708.178 309.74085 309.74085 160758.71 160758.71 -1224.7678 -1224.7678 19000 -36389.058 -36389.058 -36713.171 -36713.171 313.46999 313.46999 160635.23 160635.23 -492.09514 -492.09514 Loop time of 142.128 on 1 procs for 1000 steps with 8000 atoms Performance: 0.608 ns/day, 39.480 hours/ns, 7.036 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 140.46 | 140.46 | 140.46 | 0.0 | 98.82 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20102 | 0.20102 | 0.20102 | 0.0 | 0.14 Output | 0.00022616 | 0.00022616 | 0.00022616 | 0.0 | 0.00 Modify | 1.3134 | 1.3134 | 1.3134 | 0.0 | 0.92 Other | | 0.1582 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 373552.0 ave 373552 max 373552 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 373552 Ave neighs/atom = 46.694000 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.274269937884, Press = 2.88355369053426 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -36389.058 -36389.058 -36713.171 -36713.171 313.46999 313.46999 160635.23 160635.23 -492.09514 -492.09514 20000 -36391.294 -36391.294 -36709.945 -36709.945 308.18734 308.18734 160485.18 160485.18 393.83955 393.83955 Loop time of 142.084 on 1 procs for 1000 steps with 8000 atoms Performance: 0.608 ns/day, 39.468 hours/ns, 7.038 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 140.41 | 140.41 | 140.41 | 0.0 | 98.82 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20079 | 0.20079 | 0.20079 | 0.0 | 0.14 Output | 0.00027219 | 0.00027219 | 0.00027219 | 0.0 | 0.00 Modify | 1.314 | 1.314 | 1.314 | 0.0 | 0.92 Other | | 0.1587 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 373438.0 ave 373438 max 373438 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 373438 Ave neighs/atom = 46.679750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.277079426976, Press = 2.23620132907757 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -36391.294 -36391.294 -36709.945 -36709.945 308.18734 308.18734 160485.18 160485.18 393.83955 393.83955 21000 -36392.755 -36392.755 -36718.861 -36718.861 315.39761 315.39761 160412.73 160412.73 779.21252 779.21252 Loop time of 142.208 on 1 procs for 1000 steps with 8000 atoms Performance: 0.608 ns/day, 39.502 hours/ns, 7.032 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 140.54 | 140.54 | 140.54 | 0.0 | 98.82 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.20063 | 0.20063 | 0.20063 | 0.0 | 0.14 Output | 0.00022834 | 0.00022834 | 0.00022834 | 0.0 | 0.00 Modify | 1.3113 | 1.3113 | 1.3113 | 0.0 | 0.92 Other | | 0.1591 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 374204.0 ave 374204 max 374204 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 374204 Ave neighs/atom = 46.775500 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.26845684509, Press = 1.06458610979423 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -36392.755 -36392.755 -36718.861 -36718.861 315.39761 315.39761 160412.73 160412.73 779.21252 779.21252 22000 -36388.809 -36388.809 -36715.14 -36715.14 315.61443 315.61443 160461.5 160461.5 529.79926 529.79926 Loop time of 154.559 on 1 procs for 1000 steps with 8000 atoms Performance: 0.559 ns/day, 42.933 hours/ns, 6.470 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 152.68 | 152.68 | 152.68 | 0.0 | 98.78 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.22156 | 0.22156 | 0.22156 | 0.0 | 0.14 Output | 0.00036412 | 0.00036412 | 0.00036412 | 0.0 | 0.00 Modify | 1.4859 | 1.4859 | 1.4859 | 0.0 | 0.96 Other | | 0.1712 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 373742.0 ave 373742 max 373742 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 373742 Ave neighs/atom = 46.717750 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.210908193893, Press = 0.311020323922968 next a jump SELF top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.5 ghost atom cutoff = 6.5 binsize = 3.25, bins = 17 17 17 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 6.5 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.679 | 4.679 | 4.679 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -36388.809 -36388.809 -36715.14 -36715.14 315.61443 315.61443 160461.5 160461.5 529.79926 529.79926 23000 -36393.565 -36393.565 -36717.172 -36717.172 312.98074 312.98074 160580.68 160580.68 -184.77401 -184.77401 Loop time of 163.689 on 1 procs for 1000 steps with 8000 atoms Performance: 0.528 ns/day, 45.469 hours/ns, 6.109 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 161.66 | 161.66 | 161.66 | 0.0 | 98.76 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23334 | 0.23334 | 0.23334 | 0.0 | 0.14 Output | 0.00022823 | 0.00022823 | 0.00022823 | 0.0 | 0.00 Modify | 1.617 | 1.617 | 1.617 | 0.0 | 0.99 Other | | 0.1816 | | | 0.11 Nlocal: 8000.00 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725.00 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0.00000 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 373490.0 ave 373490 max 373490 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 373490 Ave neighs/atom = 46.686250 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 160552.267212059 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0