# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.431141197681427*${_u_distance} variable latticeconst_converted equal 5.431141197681427*1 lattice diamond ${latticeconst_converted} lattice diamond 5.43114119768143 Lattice spacing in x,y,z = 5.4311412 5.4311412 5.4311412 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (54.311412 54.311412 54.311412) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0 0 0) to (54.311412 54.311412 54.311412) create_atoms CPU = 0.006 seconds variable mass_converted equal 28.0855*${_u_mass} variable mass_converted equal 28.0855*1 kim_interactions Si WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Si #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_DuLenoskyHennig_2011_Si__MO_883726743759_002 pair_coeff * * Si #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 28.0855 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 160203.972515028 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 160203.972515028/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 160203.972515028/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 160203.972515028/(1*1*${_u_distance}) variable V0_metal equal 160203.972515028/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 160203.972515028*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 160203.972515028 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_883726743759_002#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.24 ghost atom cutoff = 7.24 binsize = 3.62, bins = 16 16 16 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.24 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.657 | 8.657 | 8.657 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -36741.956 -36741.956 -37045.059 -37045.059 293.15 293.15 160203.97 160203.97 2020.872 2020.872 1000 -36400.778 -36400.778 -36716.217 -36716.217 305.08029 305.08029 159393.59 159393.59 114.10279 114.10279 Loop time of 571.669 on 1 procs for 1000 steps with 8000 atoms Performance: 0.151 ns/day, 158.797 hours/ns, 1.749 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 569.88 | 569.88 | 569.88 | 0.0 | 99.69 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25311 | 0.25311 | 0.25311 | 0.0 | 0.04 Output | 0.00040987 | 0.00040987 | 0.00040987 | 0.0 | 0.00 Modify | 1.3681 | 1.3681 | 1.3681 | 0.0 | 0.24 Other | | 0.1677 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 688000 ave 688000 max 688000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 688000 Ave neighs/atom = 86 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.24 ghost atom cutoff = 7.24 binsize = 3.62, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.24 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.522 | 8.522 | 8.522 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -36400.778 -36400.778 -36716.217 -36716.217 305.08029 305.08029 159393.59 159393.59 114.10279 114.10279 2000 -36436.908 -36436.908 -36732.257 -36732.257 285.65028 285.65028 159272.47 159272.47 974.04122 974.04122 Loop time of 585.519 on 1 procs for 1000 steps with 8000 atoms Performance: 0.148 ns/day, 162.644 hours/ns, 1.708 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 583.66 | 583.66 | 583.66 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25252 | 0.25252 | 0.25252 | 0.0 | 0.04 Output | 0.00027356 | 0.00027356 | 0.00027356 | 0.0 | 0.00 Modify | 1.4354 | 1.4354 | 1.4354 | 0.0 | 0.25 Other | | 0.173 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 685064 ave 685064 max 685064 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 685064 Ave neighs/atom = 85.633 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.24 ghost atom cutoff = 7.24 binsize = 3.62, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.24 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.522 | 8.522 | 8.522 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -36436.908 -36436.908 -36732.257 -36732.257 285.65028 285.65028 159272.47 159272.47 974.04122 974.04122 3000 -36414.567 -36414.567 -36725.064 -36725.064 300.30063 300.30063 159401.4 159401.4 60.074708 60.074708 Loop time of 588.545 on 1 procs for 1000 steps with 8000 atoms Performance: 0.147 ns/day, 163.485 hours/ns, 1.699 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 586.66 | 586.66 | 586.66 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25663 | 0.25663 | 0.25663 | 0.0 | 0.04 Output | 0.00033058 | 0.00033058 | 0.00033058 | 0.0 | 0.00 Modify | 1.4492 | 1.4492 | 1.4492 | 0.0 | 0.25 Other | | 0.1747 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 685584 ave 685584 max 685584 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 685584 Ave neighs/atom = 85.698 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.24 ghost atom cutoff = 7.24 binsize = 3.62, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.24 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.522 | 8.522 | 8.522 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -36414.567 -36414.567 -36725.064 -36725.064 300.30063 300.30063 159401.4 159401.4 60.074708 60.074708 4000 -36429.622 -36429.622 -36728.238 -36728.238 288.81069 288.81069 159224.34 159224.34 744.06743 744.06743 Loop time of 587.516 on 1 procs for 1000 steps with 8000 atoms Performance: 0.147 ns/day, 163.199 hours/ns, 1.702 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 585.65 | 585.65 | 585.65 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25324 | 0.25324 | 0.25324 | 0.0 | 0.04 Output | 0.00031485 | 0.00031485 | 0.00031485 | 0.0 | 0.00 Modify | 1.4362 | 1.4362 | 1.4362 | 0.0 | 0.24 Other | | 0.1735 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 685056 ave 685056 max 685056 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 685056 Ave neighs/atom = 85.632 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.24 ghost atom cutoff = 7.24 binsize = 3.62, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.24 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.522 | 8.522 | 8.522 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -36429.622 -36429.622 -36728.238 -36728.238 288.81069 288.81069 159224.34 159224.34 744.06743 744.06743 5000 -36421.402 -36421.402 -36724.914 -36724.914 293.54573 293.54573 159424.57 159424.57 -436.78409 -436.78409 Loop time of 585.651 on 1 procs for 1000 steps with 8000 atoms Performance: 0.148 ns/day, 162.681 hours/ns, 1.708 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 583.79 | 583.79 | 583.79 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25201 | 0.25201 | 0.25201 | 0.0 | 0.04 Output | 0.00028008 | 0.00028008 | 0.00028008 | 0.0 | 0.00 Modify | 1.4322 | 1.4322 | 1.4322 | 0.0 | 0.24 Other | | 0.1722 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 685274 ave 685274 max 685274 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 685274 Ave neighs/atom = 85.65925 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 295.324932746023, Press = -53.7406133953901 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.24 ghost atom cutoff = 7.24 binsize = 3.62, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.24 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.522 | 8.522 | 8.522 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -36421.402 -36421.402 -36724.914 -36724.914 293.54573 293.54573 159424.57 159424.57 -436.78409 -436.78409 6000 -36424.328 -36424.328 -36723.761 -36723.761 289.60093 289.60093 159370.6 159370.6 -94.188188 -94.188188 Loop time of 589.722 on 1 procs for 1000 steps with 8000 atoms Performance: 0.147 ns/day, 163.812 hours/ns, 1.696 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 587.81 | 587.81 | 587.81 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25464 | 0.25464 | 0.25464 | 0.0 | 0.04 Output | 0.00024922 | 0.00024922 | 0.00024922 | 0.0 | 0.00 Modify | 1.484 | 1.484 | 1.484 | 0.0 | 0.25 Other | | 0.1734 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 685068 ave 685068 max 685068 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 685068 Ave neighs/atom = 85.6335 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.882036052556, Press = 8.1419871961398 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.24 ghost atom cutoff = 7.24 binsize = 3.62, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.24 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.522 | 8.522 | 8.522 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -36424.328 -36424.328 -36723.761 -36723.761 289.60093 289.60093 159370.6 159370.6 -94.188188 -94.188188 7000 -36424.317 -36424.317 -36725.305 -36725.305 291.10413 291.10413 159274.59 159274.59 466.84917 466.84917 Loop time of 584.719 on 1 procs for 1000 steps with 8000 atoms Performance: 0.148 ns/day, 162.422 hours/ns, 1.710 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 582.85 | 582.85 | 582.85 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25315 | 0.25315 | 0.25315 | 0.0 | 0.04 Output | 0.00028409 | 0.00028409 | 0.00028409 | 0.0 | 0.00 Modify | 1.4493 | 1.4493 | 1.4493 | 0.0 | 0.25 Other | | 0.1708 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 684908 ave 684908 max 684908 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 684908 Ave neighs/atom = 85.6135 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.214893648872, Press = -12.4770963858047 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.24 ghost atom cutoff = 7.24 binsize = 3.62, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.24 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.522 | 8.522 | 8.522 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -36424.317 -36424.317 -36725.305 -36725.305 291.10413 291.10413 159274.59 159274.59 466.84917 466.84917 8000 -36422.18 -36422.18 -36723.329 -36723.329 291.26074 291.26074 159387.4 159387.4 -38.090874 -38.090874 Loop time of 580.265 on 1 procs for 1000 steps with 8000 atoms Performance: 0.149 ns/day, 161.185 hours/ns, 1.723 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 578.42 | 578.42 | 578.42 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24932 | 0.24932 | 0.24932 | 0.0 | 0.04 Output | 0.00023448 | 0.00023448 | 0.00023448 | 0.0 | 0.00 Modify | 1.4285 | 1.4285 | 1.4285 | 0.0 | 0.25 Other | | 0.1691 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 685122 ave 685122 max 685122 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 685122 Ave neighs/atom = 85.64025 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.090066533525, Press = -1.53833676135106 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.24 ghost atom cutoff = 7.24 binsize = 3.62, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.24 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.522 | 8.522 | 8.522 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -36422.18 -36422.18 -36723.329 -36723.329 291.26074 291.26074 159387.4 159387.4 -38.090874 -38.090874 9000 -36425.357 -36425.357 -36723.994 -36723.994 288.8303 288.8303 159498.29 159498.29 -802.85943 -802.85943 Loop time of 585.133 on 1 procs for 1000 steps with 8000 atoms Performance: 0.148 ns/day, 162.537 hours/ns, 1.709 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 583.25 | 583.25 | 583.25 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25154 | 0.25154 | 0.25154 | 0.0 | 0.04 Output | 0.0002865 | 0.0002865 | 0.0002865 | 0.0 | 0.00 Modify | 1.4571 | 1.4571 | 1.4571 | 0.0 | 0.25 Other | | 0.1724 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 685132 ave 685132 max 685132 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 685132 Ave neighs/atom = 85.6415 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.171305761398, Press = -0.309153976765612 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.24 ghost atom cutoff = 7.24 binsize = 3.62, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.24 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.522 | 8.522 | 8.522 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -36425.357 -36425.357 -36723.994 -36723.994 288.8303 288.8303 159498.29 159498.29 -802.85943 -802.85943 10000 -36420.822 -36420.822 -36730.185 -36730.185 299.20418 299.20418 159372.94 159372.94 161.1353 161.1353 Loop time of 582.886 on 1 procs for 1000 steps with 8000 atoms Performance: 0.148 ns/day, 161.913 hours/ns, 1.716 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 581.01 | 581.01 | 581.01 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.24889 | 0.24889 | 0.24889 | 0.0 | 0.04 Output | 0.00028238 | 0.00028238 | 0.00028238 | 0.0 | 0.00 Modify | 1.4575 | 1.4575 | 1.4575 | 0.0 | 0.25 Other | | 0.1705 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 684914 ave 684914 max 684914 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 684914 Ave neighs/atom = 85.61425 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.112430407012, Press = -0.558568346956355 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.24 ghost atom cutoff = 7.24 binsize = 3.62, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.24 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.522 | 8.522 | 8.522 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -36420.822 -36420.822 -36730.185 -36730.185 299.20418 299.20418 159372.94 159372.94 161.1353 161.1353 11000 -36427.201 -36427.201 -36729.691 -36729.691 292.55723 292.55723 159452.83 159452.83 -335.90465 -335.90465 Loop time of 581.086 on 1 procs for 1000 steps with 8000 atoms Performance: 0.149 ns/day, 161.413 hours/ns, 1.721 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 579.23 | 579.23 | 579.23 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.2507 | 0.2507 | 0.2507 | 0.0 | 0.04 Output | 0.00037464 | 0.00037464 | 0.00037464 | 0.0 | 0.00 Modify | 1.4316 | 1.4316 | 1.4316 | 0.0 | 0.25 Other | | 0.1689 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 685254 ave 685254 max 685254 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 685254 Ave neighs/atom = 85.65675 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.135737538626, Press = -0.602808908498615 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.24 ghost atom cutoff = 7.24 binsize = 3.62, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.24 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.522 | 8.522 | 8.522 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -36427.201 -36427.201 -36729.691 -36729.691 292.55723 292.55723 159452.83 159452.83 -335.90465 -335.90465 12000 -36421.291 -36421.291 -36724.905 -36724.905 293.64422 293.64422 159484.57 159484.57 -668.34943 -668.34943 Loop time of 587.228 on 1 procs for 1000 steps with 8000 atoms Performance: 0.147 ns/day, 163.119 hours/ns, 1.703 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 585.32 | 585.32 | 585.32 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25351 | 0.25351 | 0.25351 | 0.0 | 0.04 Output | 0.00030447 | 0.00030447 | 0.00030447 | 0.0 | 0.00 Modify | 1.4774 | 1.4774 | 1.4774 | 0.0 | 0.25 Other | | 0.1736 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 685218 ave 685218 max 685218 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 685218 Ave neighs/atom = 85.65225 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.273597154988, Press = 0.548999360059943 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.24 ghost atom cutoff = 7.24 binsize = 3.62, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.24 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.522 | 8.522 | 8.522 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -36421.291 -36421.291 -36724.905 -36724.905 293.64422 293.64422 159484.57 159484.57 -668.34943 -668.34943 13000 -36421.577 -36421.577 -36728.309 -36728.309 296.66004 296.66004 159249.13 159249.13 782.06898 782.06898 Loop time of 588.678 on 1 procs for 1000 steps with 8000 atoms Performance: 0.147 ns/day, 163.522 hours/ns, 1.699 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 586.75 | 586.75 | 586.75 | 0.0 | 99.67 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25311 | 0.25311 | 0.25311 | 0.0 | 0.04 Output | 0.00023293 | 0.00023293 | 0.00023293 | 0.0 | 0.00 Modify | 1.499 | 1.499 | 1.499 | 0.0 | 0.25 Other | | 0.175 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 685014 ave 685014 max 685014 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 685014 Ave neighs/atom = 85.62675 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.348145868792, Press = 1.44091002261002 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.24 ghost atom cutoff = 7.24 binsize = 3.62, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.24 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.522 | 8.522 | 8.522 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -36421.577 -36421.577 -36728.309 -36728.309 296.66004 296.66004 159249.13 159249.13 782.06898 782.06898 14000 -36425.047 -36425.047 -36729.007 -36729.007 293.97914 293.97914 159490.52 159490.52 -679.10813 -679.10813 Loop time of 583.531 on 1 procs for 1000 steps with 8000 atoms Performance: 0.148 ns/day, 162.092 hours/ns, 1.714 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 581.65 | 581.65 | 581.65 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25203 | 0.25203 | 0.25203 | 0.0 | 0.04 Output | 0.00029108 | 0.00029108 | 0.00029108 | 0.0 | 0.00 Modify | 1.4547 | 1.4547 | 1.4547 | 0.0 | 0.25 Other | | 0.1713 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 685270 ave 685270 max 685270 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 685270 Ave neighs/atom = 85.65875 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.461206160597, Press = -1.5162300361194 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.24 ghost atom cutoff = 7.24 binsize = 3.62, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.24 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.522 | 8.522 | 8.522 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -36425.047 -36425.047 -36729.007 -36729.007 293.97914 293.97914 159490.52 159490.52 -679.10813 -679.10813 15000 -36423.197 -36423.197 -36725.74 -36725.74 292.60825 292.60825 159246.54 159246.54 611.62991 611.62991 Loop time of 579.356 on 1 procs for 1000 steps with 8000 atoms Performance: 0.149 ns/day, 160.932 hours/ns, 1.726 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 577.51 | 577.51 | 577.51 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25095 | 0.25095 | 0.25095 | 0.0 | 0.04 Output | 0.00023921 | 0.00023921 | 0.00023921 | 0.0 | 0.00 Modify | 1.4257 | 1.4257 | 1.4257 | 0.0 | 0.25 Other | | 0.1689 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 684974 ave 684974 max 684974 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 684974 Ave neighs/atom = 85.62175 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.38070643216, Press = 0.559028292507279 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.24 ghost atom cutoff = 7.24 binsize = 3.62, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.24 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.522 | 8.522 | 8.522 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -36423.197 -36423.197 -36725.74 -36725.74 292.60825 292.60825 159246.54 159246.54 611.62991 611.62991 16000 -36421.944 -36421.944 -36723.333 -36723.333 291.49244 291.49244 159488.92 159488.92 -845.77446 -845.77446 Loop time of 580.688 on 1 procs for 1000 steps with 8000 atoms Performance: 0.149 ns/day, 161.302 hours/ns, 1.722 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 578.83 | 578.83 | 578.83 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25208 | 0.25208 | 0.25208 | 0.0 | 0.04 Output | 0.00034041 | 0.00034041 | 0.00034041 | 0.0 | 0.00 Modify | 1.4351 | 1.4351 | 1.4351 | 0.0 | 0.25 Other | | 0.1702 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 685228 ave 685228 max 685228 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 685228 Ave neighs/atom = 85.6535 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.461930445451, Press = -0.315698992747397 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.24 ghost atom cutoff = 7.24 binsize = 3.62, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.24 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.522 | 8.522 | 8.522 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -36421.944 -36421.944 -36723.333 -36723.333 291.49244 291.49244 159488.92 159488.92 -845.77446 -845.77446 17000 -36424.905 -36424.905 -36726.105 -36726.105 291.30928 291.30928 159454.64 159454.64 -292.99147 -292.99147 Loop time of 581.782 on 1 procs for 1000 steps with 8000 atoms Performance: 0.149 ns/day, 161.606 hours/ns, 1.719 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 579.91 | 579.91 | 579.91 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25156 | 0.25156 | 0.25156 | 0.0 | 0.04 Output | 0.00023263 | 0.00023263 | 0.00023263 | 0.0 | 0.00 Modify | 1.4472 | 1.4472 | 1.4472 | 0.0 | 0.25 Other | | 0.1712 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 684872 ave 684872 max 684872 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 684872 Ave neighs/atom = 85.609 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.468104960632, Press = 1.17434716606531 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.24 ghost atom cutoff = 7.24 binsize = 3.62, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.24 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.522 | 8.522 | 8.522 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -36424.905 -36424.905 -36726.105 -36726.105 291.30928 291.30928 159454.64 159454.64 -292.99147 -292.99147 18000 -36423.706 -36423.706 -36727.542 -36727.542 293.85839 293.85839 159340.32 159340.32 403.70721 403.70721 Loop time of 581.948 on 1 procs for 1000 steps with 8000 atoms Performance: 0.148 ns/day, 161.652 hours/ns, 1.718 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 580.08 | 580.08 | 580.08 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25175 | 0.25175 | 0.25175 | 0.0 | 0.04 Output | 0.0002828 | 0.0002828 | 0.0002828 | 0.0 | 0.00 Modify | 1.4411 | 1.4411 | 1.4411 | 0.0 | 0.25 Other | | 0.1703 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 685052 ave 685052 max 685052 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 685052 Ave neighs/atom = 85.6315 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.460783666237, Press = -0.430257374993906 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.24 ghost atom cutoff = 7.24 binsize = 3.62, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.24 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.522 | 8.522 | 8.522 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -36423.706 -36423.706 -36727.542 -36727.542 293.85839 293.85839 159340.32 159340.32 403.70721 403.70721 19000 -36423.951 -36423.951 -36725.995 -36725.995 292.12505 292.12505 159453.83 159453.83 -330.53478 -330.53478 Loop time of 582.466 on 1 procs for 1000 steps with 8000 atoms Performance: 0.148 ns/day, 161.796 hours/ns, 1.717 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 580.59 | 580.59 | 580.59 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25106 | 0.25106 | 0.25106 | 0.0 | 0.04 Output | 0.000361 | 0.000361 | 0.000361 | 0.0 | 0.00 Modify | 1.4491 | 1.4491 | 1.4491 | 0.0 | 0.25 Other | | 0.1705 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 685130 ave 685130 max 685130 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 685130 Ave neighs/atom = 85.64125 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.391005075307, Press = 0.666654667838811 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7.24 ghost atom cutoff = 7.24 binsize = 3.62, bins = 15 15 15 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7.24 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 8.522 | 8.522 | 8.522 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -36423.951 -36423.951 -36725.995 -36725.995 292.12505 292.12505 159453.83 159453.83 -330.53478 -330.53478 20000 -36423.342 -36423.342 -36726.591 -36726.591 293.29097 293.29097 159427.68 159427.68 -149.88951 -149.88951 Loop time of 591.646 on 1 procs for 1000 steps with 8000 atoms Performance: 0.146 ns/day, 164.346 hours/ns, 1.690 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 589.73 | 589.73 | 589.73 | 0.0 | 99.68 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.25251 | 0.25251 | 0.25251 | 0.0 | 0.04 Output | 0.00024118 | 0.00024118 | 0.00024118 | 0.0 | 0.00 Modify | 1.4904 | 1.4904 | 1.4904 | 0.0 | 0.25 Other | | 0.1759 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 685018 ave 685018 max 685018 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 685018 Ave neighs/atom = 85.62725 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 159382.774237061 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0