# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.355957195162773*${_u_distance} variable latticeconst_converted equal 5.355957195162773*1 lattice diamond ${latticeconst_converted} lattice diamond 5.35595719516277 Lattice spacing in x,y,z = 5.3559572 5.3559572 5.3559572 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (53.559572 53.559572 53.559572) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0 0 0) to (53.559572 53.559572 53.559572) create_atoms CPU = 0.001 seconds variable mass_converted equal 28.0855*${_u_mass} variable mass_converted equal 28.0855*1 kim_interactions Si WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Si #=== BEGIN kim interactions ================================== variable kim_update equal 0 variable kim_periodic equal 1 pair_style reaxff NULL mincap 200 safezone 2 pair_coeff * * /tmp/kim-shared-library-parameter-file-directory-XXXXXXCs5HzD/ReaxFF_HOSiCeNaCl.txt Si WARNING: Van der Waals parameters for element SI indicate inner wall+shielding, but earlier atoms indicate a different van der Waals method. This may cause division-by-zero errors. Keeping van der Waals setting for earlier atoms. (src/REAXFF/reaxff_ffield.cpp:251) WARNING: Changed valency_val to valency_boc for X (src/REAXFF/reaxff_ffield.cpp:296) fix reaxqeq all qeq/reaxff 1 0.0 10.0 1.0e-6 reaxff #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 28.0855 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 153642.474252245 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 153642.474252245/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 153642.474252245/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 153642.474252245/(1*1*${_u_distance}) variable V0_metal equal 153642.474252245/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 153642.474252245*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 153642.474252245 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1000 timestep ${timestep_converted} timestep 1 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1000 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*0.986923266716013 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1000 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 100 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 100 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 100 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 100 iso 0 0 1000 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/23.0605480120695 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/23.0605480120695 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/0.986923266716013 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/SM_282799919035_000#item-citation - pair reaxff command: @Article{Aktulga12, author = {H. M. Aktulga, J. C. Fogarty, S. A. Pandit, A. Y. Grama}, title = {Parallel reactive molecular dynamics: Numerical methods and algorithmic techniques}, journal = {Parallel Computing}, year = 2012, volume = 38, pages = {245--259} } - fix qeq/reaxff command: @Article{Aktulga12, author = {H. M. Aktulga, J. C. Fogarty, S. A. Pandit, A. Y. Grama}, title = {Parallel reactive molecular dynamics: Numerical methods and algorithmic techniques}, journal = {Parallel Computing}, year = 2012, volume = 38, pages = {245--259} } CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 4000, page size: 100000 master list distance cutoff = 12 ghost atom cutoff = 12 binsize = 6, bins = 9 9 9 2 neighbor lists, perpetual/occasional/extra = 2 0 0 (1) pair reaxff, perpetual attributes: half, newton off, ghost pair build: half/bin/newtoff/ghost stencil: full/ghost/bin/3d bin: standard (2) fix qeq/reaxff, perpetual, copy from (1) attributes: half, newton off pair build: copy stencil: none bin: none Per MPI rank memory allocation (min/avg/max) = 609.5 | 609.5 | 609.5 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -831178.14 -36043.295 -838644.73 -36367.077 313.15 313.15 153642.47 153642.47 2221.5116 2250.9466 1000 -823043.75 -35690.555 -830754.02 -36024.903 323.36979 323.36979 153362.24 153362.24 763.92031 774.04225 Loop time of 345.478 on 1 procs for 1000 steps with 8000 atoms Performance: 0.250 ns/day, 95.966 hours/ns, 2.895 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 263.85 | 263.85 | 263.85 | 0.0 | 76.37 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.071609 | 0.071609 | 0.071609 | 0.0 | 0.02 Output | 0.0002253 | 0.0002253 | 0.0002253 | 0.0 | 0.00 Modify | 81.518 | 81.518 | 81.518 | 0.0 | 23.60 Other | | 0.03507 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15171 ave 15171 max 15171 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.8731e+06 ave 1.8731e+06 max 1.8731e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1873098 Ave neighs/atom = 234.13725 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.6 | 608.6 | 608.6 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -823043.75 -35690.555 -830754.02 -36024.903 323.36979 323.36979 153362.24 153362.24 763.92031 774.04225 2000 -823937.52 -35729.312 -830845.74 -36028.881 289.73199 289.73199 153523.04 153523.04 -547.50062 -554.755 Loop time of 350.077 on 1 procs for 1000 steps with 8000 atoms Performance: 0.247 ns/day, 97.244 hours/ns, 2.857 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 267.55 | 267.55 | 267.55 | 0.0 | 76.43 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.073832 | 0.073832 | 0.073832 | 0.0 | 0.02 Output | 0.00013065 | 0.00013065 | 0.00013065 | 0.0 | 0.00 Modify | 82.418 | 82.418 | 82.418 | 0.0 | 23.54 Other | | 0.03497 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15790 ave 15790 max 15790 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83388e+06 ave 1.83388e+06 max 1.83388e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1833884 Ave neighs/atom = 229.2355 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.6 | 608.6 | 608.6 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -823937.52 -35729.312 -830845.74 -36028.881 289.73199 289.73199 153523.04 153523.04 -547.50062 -554.755 3000 -823378.91 -35705.088 -830946.52 -36033.251 317.38699 317.38699 153547.91 153547.91 -347.8313 -352.44006 Loop time of 350.737 on 1 procs for 1000 steps with 8000 atoms Performance: 0.246 ns/day, 97.427 hours/ns, 2.851 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 268.16 | 268.16 | 268.16 | 0.0 | 76.46 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.073804 | 0.073804 | 0.073804 | 0.0 | 0.02 Output | 0.00012399 | 0.00012399 | 0.00012399 | 0.0 | 0.00 Modify | 82.47 | 82.47 | 82.47 | 0.0 | 23.51 Other | | 0.0346 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15829 ave 15829 max 15829 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83288e+06 ave 1.83288e+06 max 1.83288e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1832876 Ave neighs/atom = 229.1095 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.6 | 608.6 | 608.6 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -823378.91 -35705.088 -830946.52 -36033.251 317.38699 317.38699 153547.91 153547.91 -347.8313 -352.44006 4000 -823765.92 -35721.871 -831068.65 -36038.547 306.27751 306.27751 153591.67 153591.67 -636.44521 -644.8781 Loop time of 350.932 on 1 procs for 1000 steps with 8000 atoms Performance: 0.246 ns/day, 97.481 hours/ns, 2.850 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 268.17 | 268.17 | 268.17 | 0.0 | 76.42 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.073357 | 0.073357 | 0.073357 | 0.0 | 0.02 Output | 0.00023175 | 0.00023175 | 0.00023175 | 0.0 | 0.00 Modify | 82.65 | 82.65 | 82.65 | 0.0 | 23.55 Other | | 0.03463 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15748 ave 15748 max 15748 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83233e+06 ave 1.83233e+06 max 1.83233e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1832332 Ave neighs/atom = 229.0415 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.5 | 608.5 | 608.5 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -823765.92 -35721.871 -831068.65 -36038.547 306.27751 306.27751 153591.67 153591.67 -636.4452 -644.8781 5000 -823530.23 -35711.65 -830903.06 -36031.367 309.21791 309.21791 153438.72 153438.72 217.45303 220.33428 Loop time of 351.343 on 1 procs for 1000 steps with 8000 atoms Performance: 0.246 ns/day, 97.595 hours/ns, 2.846 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 268.65 | 268.65 | 268.65 | 0.0 | 76.46 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.073569 | 0.073569 | 0.073569 | 0.0 | 0.02 Output | 9.4468e-05 | 9.4468e-05 | 9.4468e-05 | 0.0 | 0.00 Modify | 82.589 | 82.589 | 82.589 | 0.0 | 23.51 Other | | 0.03471 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15821 ave 15821 max 15821 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83181e+06 ave 1.83181e+06 max 1.83181e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1831812 Ave neighs/atom = 228.9765 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 317.389664885288, Press = 229.21754444642 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.6 | 608.6 | 608.6 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -823530.23 -35711.65 -830903.06 -36031.367 309.21791 309.21791 153438.72 153438.72 217.45303 220.33428 6000 -823625.15 -35715.767 -831055.35 -36037.97 311.62366 311.62366 153519.5 153519.5 -63.318901 -64.157877 Loop time of 351.063 on 1 procs for 1000 steps with 8000 atoms Performance: 0.246 ns/day, 97.518 hours/ns, 2.848 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 268.32 | 268.32 | 268.32 | 0.0 | 76.43 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.072162 | 0.072162 | 0.072162 | 0.0 | 0.02 Output | 8.3396e-05 | 8.3396e-05 | 8.3396e-05 | 0.0 | 0.00 Modify | 82.639 | 82.639 | 82.639 | 0.0 | 23.54 Other | | 0.03441 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15816 ave 15816 max 15816 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83367e+06 ave 1.83367e+06 max 1.83367e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1833674 Ave neighs/atom = 229.20925 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.829700650706, Press = 5.97641851185296 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.5 | 608.5 | 608.5 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -823625.15 -35715.767 -831055.35 -36037.97 311.62366 311.62366 153519.5 153519.5 -63.318901 -64.157876 7000 -823665.15 -35717.501 -831073.24 -36038.746 310.69658 310.69658 153283.13 153283.13 1215.9661 1232.0776 Loop time of 350.937 on 1 procs for 1000 steps with 8000 atoms Performance: 0.246 ns/day, 97.482 hours/ns, 2.850 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 268.25 | 268.25 | 268.25 | 0.0 | 76.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.072381 | 0.072381 | 0.072381 | 0.0 | 0.02 Output | 8.038e-05 | 8.038e-05 | 8.038e-05 | 0.0 | 0.00 Modify | 82.584 | 82.584 | 82.584 | 0.0 | 23.53 Other | | 0.03451 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15793 ave 15793 max 15793 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83168e+06 ave 1.83168e+06 max 1.83168e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1831680 Ave neighs/atom = 228.96 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.367531076645, Press = 26.9878980004252 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.6 | 608.6 | 608.6 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -823665.15 -35717.501 -831073.24 -36038.746 310.69658 310.69658 153283.13 153283.13 1215.9661 1232.0776 8000 -823486.06 -35709.735 -831148.99 -36042.031 321.3845 321.3845 153533.04 153533.04 -32.930274 -33.3666 Loop time of 351.384 on 1 procs for 1000 steps with 8000 atoms Performance: 0.246 ns/day, 97.607 hours/ns, 2.846 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 268.83 | 268.83 | 268.83 | 0.0 | 76.51 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.072097 | 0.072097 | 0.072097 | 0.0 | 0.02 Output | 7.7526e-05 | 7.7526e-05 | 7.7526e-05 | 0.0 | 0.00 Modify | 82.444 | 82.444 | 82.444 | 0.0 | 23.46 Other | | 0.0344 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15935 ave 15935 max 15935 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.836e+06 ave 1.836e+06 max 1.836e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1835999 Ave neighs/atom = 229.49988 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.122509270803, Press = 3.22290955368507 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.6 | 608.6 | 608.6 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -823486.06 -35709.735 -831148.99 -36042.031 321.3845 321.3845 153533.04 153533.04 -32.930273 -33.366599 9000 -823763.95 -35721.786 -830990.48 -36035.158 303.08186 303.08186 153390.19 153390.19 519.92744 526.81648 Loop time of 350.778 on 1 procs for 1000 steps with 8000 atoms Performance: 0.246 ns/day, 97.438 hours/ns, 2.851 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 268.06 | 268.06 | 268.06 | 0.0 | 76.42 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.072367 | 0.072367 | 0.072367 | 0.0 | 0.02 Output | 7.6083e-05 | 7.6083e-05 | 7.6083e-05 | 0.0 | 0.00 Modify | 82.613 | 82.613 | 82.613 | 0.0 | 23.55 Other | | 0.0343 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15767 ave 15767 max 15767 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83244e+06 ave 1.83244e+06 max 1.83244e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1832436 Ave neighs/atom = 229.0545 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.157497449539, Press = 2.79917479530954 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.6 | 608.6 | 608.6 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -823763.95 -35721.786 -830990.48 -36035.158 303.08186 303.08186 153390.19 153390.19 519.92744 526.81648 10000 -823497.53 -35710.232 -830883.98 -36030.539 309.78915 309.78915 153552.69 153552.69 -379.13709 -384.16066 Loop time of 351.796 on 1 procs for 1000 steps with 8000 atoms Performance: 0.246 ns/day, 97.721 hours/ns, 2.843 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 268.93 | 268.93 | 268.93 | 0.0 | 76.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.072141 | 0.072141 | 0.072141 | 0.0 | 0.02 Output | 7.8427e-05 | 7.8427e-05 | 7.8427e-05 | 0.0 | 0.00 Modify | 82.76 | 82.76 | 82.76 | 0.0 | 23.52 Other | | 0.03424 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15847 ave 15847 max 15847 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83493e+06 ave 1.83493e+06 max 1.83493e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1834931 Ave neighs/atom = 229.36638 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.190046778574, Press = 2.70523213238192 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.5 | 608.5 | 608.5 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -823497.53 -35710.232 -830883.98 -36030.539 309.78915 309.78915 153552.69 153552.69 -379.13709 -384.16066 11000 -823596.6 -35714.528 -831197.37 -36044.129 318.77748 318.77748 153415.66 153415.66 687.31017 696.41703 Loop time of 350.954 on 1 procs for 1000 steps with 8000 atoms Performance: 0.246 ns/day, 97.487 hours/ns, 2.849 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 268.06 | 268.06 | 268.06 | 0.0 | 76.38 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070502 | 0.070502 | 0.070502 | 0.0 | 0.02 Output | 7.6263e-05 | 7.6263e-05 | 7.6263e-05 | 0.0 | 0.00 Modify | 82.787 | 82.787 | 82.787 | 0.0 | 23.59 Other | | 0.03368 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15747 ave 15747 max 15747 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83132e+06 ave 1.83132e+06 max 1.83132e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1831321 Ave neighs/atom = 228.91512 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.287216548441, Press = 2.00373758784103 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.6 | 608.6 | 608.6 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -823596.6 -35714.528 -831197.37 -36044.129 318.77748 318.77748 153415.66 153415.66 687.31017 696.41703 12000 -823545.32 -35712.305 -831102.64 -36040.021 316.95507 316.95507 153748.31 153748.31 -1343.7691 -1361.5741 Loop time of 350.757 on 1 procs for 1000 steps with 8000 atoms Performance: 0.246 ns/day, 97.433 hours/ns, 2.851 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 268.07 | 268.07 | 268.07 | 0.0 | 76.43 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070548 | 0.070548 | 0.070548 | 0.0 | 0.02 Output | 7.7485e-05 | 7.7485e-05 | 7.7485e-05 | 0.0 | 0.00 Modify | 82.585 | 82.585 | 82.585 | 0.0 | 23.54 Other | | 0.03361 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15801 ave 15801 max 15801 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.8333e+06 ave 1.8333e+06 max 1.8333e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1833301 Ave neighs/atom = 229.16262 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.49747742463, Press = -0.587187817984798 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.5 | 608.5 | 608.5 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -823545.32 -35712.305 -831102.64 -36040.021 316.95507 316.95507 153748.31 153748.31 -1343.7691 -1361.5741 13000 -823656.98 -35717.147 -831146.55 -36041.925 314.11371 314.11371 153419.34 153419.34 566.49 573.99599 Loop time of 350.757 on 1 procs for 1000 steps with 8000 atoms Performance: 0.246 ns/day, 97.432 hours/ns, 2.851 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 268.01 | 268.01 | 268.01 | 0.0 | 76.41 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.069868 | 0.069868 | 0.069868 | 0.0 | 0.02 Output | 7.8106e-05 | 7.8106e-05 | 7.8106e-05 | 0.0 | 0.00 Modify | 82.646 | 82.646 | 82.646 | 0.0 | 23.56 Other | | 0.03366 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15778 ave 15778 max 15778 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.82937e+06 ave 1.82937e+06 max 1.82937e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1829371 Ave neighs/atom = 228.67138 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.606472441894, Press = 0.438897900615889 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.6 | 608.6 | 608.6 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -823656.98 -35717.147 -831146.55 -36041.925 314.11371 314.11371 153419.34 153419.34 566.49 573.99599 14000 -823547 -35712.377 -831088.22 -36039.396 316.28011 316.28011 153630.62 153630.62 -651.73207 -660.36752 Loop time of 351.448 on 1 procs for 1000 steps with 8000 atoms Performance: 0.246 ns/day, 97.625 hours/ns, 2.845 timesteps/s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 268.55 | 268.55 | 268.55 | 0.0 | 76.41 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070161 | 0.070161 | 0.070161 | 0.0 | 0.02 Output | 7.9239e-05 | 7.9239e-05 | 7.9239e-05 | 0.0 | 0.00 Modify | 82.794 | 82.794 | 82.794 | 0.0 | 23.56 Other | | 0.03406 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15765 ave 15765 max 15765 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83375e+06 ave 1.83375e+06 max 1.83375e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1833751 Ave neighs/atom = 229.21887 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.533519607863, Press = 2.90801714004382 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.5 | 608.5 | 608.5 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -823547 -35712.377 -831088.22 -36039.396 316.28011 316.28011 153630.62 153630.62 -651.73207 -660.36752 15000 -823679.19 -35718.11 -831032.77 -36036.991 308.41014 308.41014 153477.23 153477.23 121.8763 123.49116 Loop time of 350.785 on 1 procs for 1000 steps with 8000 atoms Performance: 0.246 ns/day, 97.440 hours/ns, 2.851 timesteps/s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 268.14 | 268.14 | 268.14 | 0.0 | 76.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.069687 | 0.069687 | 0.069687 | 0.0 | 0.02 Output | 8.9768e-05 | 8.9768e-05 | 8.9768e-05 | 0.0 | 0.00 Modify | 82.545 | 82.545 | 82.545 | 0.0 | 23.53 Other | | 0.034 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15753 ave 15753 max 15753 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83053e+06 ave 1.83053e+06 max 1.83053e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1830532 Ave neighs/atom = 228.8165 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.493759779694, Press = 3.05933016552211 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.6 | 608.6 | 608.6 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -823679.19 -35718.11 -831032.77 -36036.991 308.41014 308.41014 153477.23 153477.23 121.8763 123.49116 16000 -823493.63 -35710.063 -831012.58 -36036.116 315.34612 315.34612 153583.54 153583.54 -438.54473 -444.35544 Loop time of 351.35 on 1 procs for 1000 steps with 8000 atoms Performance: 0.246 ns/day, 97.597 hours/ns, 2.846 timesteps/s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 268.56 | 268.56 | 268.56 | 0.0 | 76.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.070022 | 0.070022 | 0.070022 | 0.0 | 0.02 Output | 8.3165e-05 | 8.3165e-05 | 8.3165e-05 | 0.0 | 0.00 Modify | 82.682 | 82.682 | 82.682 | 0.0 | 23.53 Other | | 0.03402 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15816 ave 15816 max 15816 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83291e+06 ave 1.83291e+06 max 1.83291e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1832909 Ave neighs/atom = 229.11363 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.465383316945, Press = 1.13560115634797 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.5 | 608.5 | 608.5 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -823493.63 -35710.063 -831012.58 -36036.116 315.34612 315.34612 153583.54 153583.54 -438.54473 -444.35544 17000 -823618.54 -35715.48 -831058.28 -36038.097 312.02366 312.02366 153343.2 153343.2 978.59008 991.5564 Loop time of 351.138 on 1 procs for 1000 steps with 8000 atoms Performance: 0.246 ns/day, 97.538 hours/ns, 2.848 timesteps/s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 268.34 | 268.34 | 268.34 | 0.0 | 76.42 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.069901 | 0.069901 | 0.069901 | 0.0 | 0.02 Output | 8.0061e-05 | 8.0061e-05 | 8.0061e-05 | 0.0 | 0.00 Modify | 82.692 | 82.692 | 82.692 | 0.0 | 23.55 Other | | 0.03399 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15741 ave 15741 max 15741 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83078e+06 ave 1.83078e+06 max 1.83078e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1830781 Ave neighs/atom = 228.84762 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.444582333558, Press = 1.40277756556332 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.6 | 608.6 | 608.6 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -823618.54 -35715.48 -831058.28 -36038.097 312.02366 312.02366 153343.2 153343.2 978.59008 991.5564 18000 -823670.26 -35717.723 -831119.65 -36040.759 312.42879 312.42879 153529.26 153529.26 -11.721824 -11.877138 Loop time of 351.81 on 1 procs for 1000 steps with 8000 atoms Performance: 0.246 ns/day, 97.725 hours/ns, 2.842 timesteps/s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 268.93 | 268.93 | 268.93 | 0.0 | 76.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.069781 | 0.069781 | 0.069781 | 0.0 | 0.02 Output | 7.6073e-05 | 7.6073e-05 | 7.6073e-05 | 0.0 | 0.00 Modify | 82.781 | 82.781 | 82.781 | 0.0 | 23.53 Other | | 0.03398 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15883 ave 15883 max 15883 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83519e+06 ave 1.83519e+06 max 1.83519e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1835188 Ave neighs/atom = 229.3985 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.404011672359, Press = 1.12697733149907 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.5 | 608.5 | 608.5 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -823670.26 -35717.723 -831119.65 -36040.759 312.42879 312.42879 153529.26 153529.26 -11.721823 -11.877137 19000 -823688.12 -35718.497 -831252.44 -36046.517 317.24856 317.24856 153455.45 153455.45 461.50139 467.61628 Loop time of 352.129 on 1 procs for 1000 steps with 8000 atoms Performance: 0.245 ns/day, 97.814 hours/ns, 2.840 timesteps/s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 268.95 | 268.95 | 268.95 | 0.0 | 76.38 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.07035 | 0.07035 | 0.07035 | 0.0 | 0.02 Output | 7.8186e-05 | 7.8186e-05 | 7.8186e-05 | 0.0 | 0.00 Modify | 83.076 | 83.076 | 83.076 | 0.0 | 23.59 Other | | 0.03406 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15816 ave 15816 max 15816 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83169e+06 ave 1.83169e+06 max 1.83169e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1831689 Ave neighs/atom = 228.96113 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.41442171176, Press = 0.833086661094208 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.6 | 608.6 | 608.6 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -823688.12 -35718.497 -831252.44 -36046.517 317.24856 317.24856 153455.45 153455.45 461.50139 467.61628 20000 -823458.86 -35708.556 -831081.4 -36039.1 319.6907 319.6907 153583.54 153583.54 -387.69681 -392.83379 Loop time of 351.262 on 1 procs for 1000 steps with 8000 atoms Performance: 0.246 ns/day, 97.573 hours/ns, 2.847 timesteps/s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 268.45 | 268.45 | 268.45 | 0.0 | 76.42 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.069912 | 0.069912 | 0.069912 | 0.0 | 0.02 Output | 8.7835e-05 | 8.7835e-05 | 8.7835e-05 | 0.0 | 0.00 Modify | 82.707 | 82.707 | 82.707 | 0.0 | 23.55 Other | | 0.03416 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15780 ave 15780 max 15780 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83266e+06 ave 1.83266e+06 max 1.83266e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1832657 Ave neighs/atom = 229.08212 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.453609905541, Press = 0.0869472109709658 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.5 | 608.5 | 608.5 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -823458.86 -35708.556 -831081.4 -36039.1 319.6907 319.6907 153583.54 153583.54 -387.69681 -392.83379 21000 -823587.31 -35714.126 -830976.43 -36034.548 309.90061 309.90061 153539.4 153539.4 -247.07239 -250.3461 Loop time of 353.169 on 1 procs for 1000 steps with 8000 atoms Performance: 0.245 ns/day, 98.102 hours/ns, 2.832 timesteps/s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 270.18 | 270.18 | 270.18 | 0.0 | 76.50 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.069924 | 0.069924 | 0.069924 | 0.0 | 0.02 Output | 7.1534e-05 | 7.1534e-05 | 7.1534e-05 | 0.0 | 0.00 Modify | 82.888 | 82.888 | 82.888 | 0.0 | 23.47 Other | | 0.0343 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15749 ave 15749 max 15749 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83115e+06 ave 1.83115e+06 max 1.83115e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1831151 Ave neighs/atom = 228.89388 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.400419633866, Press = 0.762904351125561 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.5 | 608.5 | 608.5 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -823587.31 -35714.126 -830976.43 -36034.548 309.90061 309.90061 153539.4 153539.4 -247.07239 -250.34609 22000 -823631.4 -35716.038 -831120.4 -36040.792 314.09005 314.09005 153547.47 153547.47 -195.77953 -198.3736 Loop time of 350.278 on 1 procs for 1000 steps with 8000 atoms Performance: 0.247 ns/day, 97.300 hours/ns, 2.855 timesteps/s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 267.91 | 267.91 | 267.91 | 0.0 | 76.49 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.066714 | 0.066714 | 0.066714 | 0.0 | 0.02 Output | 9.1151e-05 | 9.1151e-05 | 9.1151e-05 | 0.0 | 0.00 Modify | 82.267 | 82.267 | 82.267 | 0.0 | 23.49 Other | | 0.03374 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15733 ave 15733 max 15733 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83191e+06 ave 1.83191e+06 max 1.83191e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1831913 Ave neighs/atom = 228.98913 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.361655743206, Press = 1.27956634689095 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 608.6 | 608.6 | 608.6 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -823631.4 -35716.038 -831120.4 -36040.792 314.09005 314.09005 153547.47 153547.47 -195.77953 -198.3736 23000 -823503.9 -35710.509 -830995.07 -36035.356 314.18065 314.18065 153492.46 153492.46 -24.840804 -25.169945 Loop time of 350.095 on 1 procs for 1000 steps with 8000 atoms Performance: 0.247 ns/day, 97.248 hours/ns, 2.856 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 267.38 | 267.38 | 267.38 | 0.0 | 76.37 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.067369 | 0.067369 | 0.067369 | 0.0 | 0.02 Output | 9.3816e-05 | 9.3816e-05 | 9.3816e-05 | 0.0 | 0.00 Modify | 82.609 | 82.609 | 82.609 | 0.0 | 23.60 Other | | 0.03333 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15803 ave 15803 max 15803 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.8324e+06 ave 1.8324e+06 max 1.8324e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1832395 Ave neighs/atom = 229.04937 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 153509.748913212 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0