# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.422300741076469*${_u_distance} variable latticeconst_converted equal 5.422300741076469*1 lattice diamond ${latticeconst_converted} lattice diamond 5.42230074107647 Lattice spacing in x,y,z = 5.4223 5.4223 5.4223 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (54.223 54.223 54.223) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms create_atoms CPU = 0.00529599 secs variable mass_converted equal 28.0855*${_u_mass} variable mass_converted equal 28.0855*1 kim_interactions Si #=== BEGIN kim_interactions ================================== pair_style meam/c pair_coeff * * /tmp/kim-simulator-model-parameter-file-directory-XXXXXX2HHgNe/library.meam Li Si /tmp/kim-simulator-model-parameter-file-directory-XXXXXX2HHgNe/LiSi.meam Si #=== END kim_interactions ==================================== mass 1 ${mass_converted} mass 1 28.0855 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 159422.936553494 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 159422.936553494/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 159422.936553494/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 159422.936553494/(1*1*${_u_distance}) variable V0_metal equal 159422.936553494/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 159422.936553494*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 159422.936553494 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 253.15*${_u_temperature} variable temp_converted equal 253.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 253.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 253.15 253.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "253.15 - 0.2" variable T_up equal "253.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 6.8 ghost atom cutoff = 6.8 binsize = 3.4, bins = 16 16 16 2 neighbor lists, perpetual/occasional/extra = 2 0 0 (1) pair meam/c, perpetual attributes: full, newton on pair build: full/bin/atomonly stencil: full/bin/3d bin: standard (2) pair meam/c, perpetual, half/full from (1) attributes: half, newton on pair build: halffull/newton stencil: none bin: none Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -36768.337 -36768.337 -37030.082 -37030.082 253.15 253.15 159422.94 159422.94 1753.6621 1753.6621 1000 -36483.605 -36483.605 -36781.953 -36781.953 288.55083 288.55083 160611.97 160611.97 -1562.9129 -1562.9129 Loop time of 321.029 on 1 procs for 1000 steps with 8000 atoms Performance: 0.269 ns/day, 89.175 hours/ns, 3.115 timesteps/s 45.5% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 320.16 | 320.16 | 320.16 | 0.0 | 99.73 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10307 | 0.10307 | 0.10307 | 0.0 | 0.03 Output | 4.3154e-05 | 4.3154e-05 | 4.3154e-05 | 0.0 | 0.00 Modify | 0.67923 | 0.67923 | 0.67923 | 0.0 | 0.21 Other | | 0.08274 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 8601 ave 8601 max 8601 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 280000 ave 280000 max 280000 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 560000 ave 560000 max 560000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 560000 Ave neighs/atom = 70 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -36483.605 -36483.605 -36781.953 -36781.953 288.55083 288.55083 160611.97 160611.97 -1562.9129 -1562.9129 2000 -36511.48 -36511.48 -36768.868 -36768.868 248.93575 248.93575 160299.22 160299.22 667.87662 667.87662 Loop time of 283.08 on 1 procs for 1000 steps with 8000 atoms Performance: 0.305 ns/day, 78.633 hours/ns, 3.533 timesteps/s 52.3% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 282.24 | 282.24 | 282.24 | 0.0 | 99.70 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.10939 | 0.10939 | 0.10939 | 0.0 | 0.04 Output | 4.8161e-05 | 4.8161e-05 | 4.8161e-05 | 0.0 | 0.00 Modify | 0.67038 | 0.67038 | 0.67038 | 0.0 | 0.24 Other | | 0.06173 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7661 ave 7661 max 7661 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 277575 ave 277575 max 277575 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555150 ave 555150 max 555150 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555150 Ave neighs/atom = 69.3937 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -36511.48 -36511.48 -36768.868 -36768.868 248.93575 248.93575 160299.22 160299.22 667.87662 667.87662 3000 -36497.802 -36497.802 -36761.655 -36761.655 255.18809 255.18809 160501.78 160501.78 -365.52303 -365.52303 Loop time of 265.169 on 1 procs for 1000 steps with 8000 atoms Performance: 0.326 ns/day, 73.658 hours/ns, 3.771 timesteps/s 55.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 264.36 | 264.36 | 264.36 | 0.0 | 99.69 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.1242 | 0.1242 | 0.1242 | 0.0 | 0.05 Output | 4.9114e-05 | 4.9114e-05 | 4.9114e-05 | 0.0 | 0.00 Modify | 0.62615 | 0.62615 | 0.62615 | 0.0 | 0.24 Other | | 0.06005 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7810 ave 7810 max 7810 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 277814 ave 277814 max 277814 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555628 ave 555628 max 555628 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555628 Ave neighs/atom = 69.4535 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -36497.802 -36497.802 -36761.655 -36761.655 255.18809 255.18809 160501.78 160501.78 -365.52303 -365.52303 4000 -36505.162 -36505.162 -36764.819 -36764.819 251.13037 251.13037 160388.36 160388.36 67.697198 67.697198 Loop time of 264.818 on 1 procs for 1000 steps with 8000 atoms Performance: 0.326 ns/day, 73.561 hours/ns, 3.776 timesteps/s 56.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 264.1 | 264.1 | 264.1 | 0.0 | 99.73 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.093601 | 0.093601 | 0.093601 | 0.0 | 0.04 Output | 8.2016e-05 | 8.2016e-05 | 8.2016e-05 | 0.0 | 0.00 Modify | 0.5894 | 0.5894 | 0.5894 | 0.0 | 0.22 Other | | 0.03394 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7729 ave 7729 max 7729 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 277446 ave 277446 max 277446 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 554892 ave 554892 max 554892 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 554892 Ave neighs/atom = 69.3615 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -36505.162 -36505.162 -36764.819 -36764.819 251.13037 251.13037 160388.36 160388.36 67.697198 67.697198 5000 -36503.792 -36503.792 -36765.02 -36765.02 252.65009 252.65009 160418.85 160418.85 27.039051 27.039051 Loop time of 245.275 on 1 procs for 1000 steps with 8000 atoms Performance: 0.352 ns/day, 68.132 hours/ns, 4.077 timesteps/s 60.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 244.64 | 244.64 | 244.64 | 0.0 | 99.74 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.075234 | 0.075234 | 0.075234 | 0.0 | 0.03 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.51965 | 0.51965 | 0.51965 | 0.0 | 0.21 Other | | 0.04207 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7773 ave 7773 max 7773 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 277546 ave 277546 max 277546 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555092 ave 555092 max 555092 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555092 Ave neighs/atom = 69.3865 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.699665408413, Press = 52.8582442004449 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -36503.792 -36503.792 -36765.02 -36765.02 252.65009 252.65009 160418.85 160418.85 27.039051 27.039051 6000 -36499.996 -36499.996 -36758.894 -36758.894 250.39588 250.39588 160410.96 160410.96 2.7809117 2.7809117 Loop time of 193.613 on 1 procs for 1000 steps with 8000 atoms Performance: 0.446 ns/day, 53.781 hours/ns, 5.165 timesteps/s 76.4% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 193.12 | 193.12 | 193.12 | 0.0 | 99.74 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.056718 | 0.056718 | 0.056718 | 0.0 | 0.03 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.38138 | 0.38138 | 0.38138 | 0.0 | 0.20 Other | | 0.05872 | | | 0.03 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7770 ave 7770 max 7770 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 277651 ave 277651 max 277651 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555302 ave 555302 max 555302 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555302 Ave neighs/atom = 69.4128 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 252.701003372257, Press = -3.95941476767086 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -36499.996 -36499.996 -36758.894 -36758.894 250.39588 250.39588 160410.96 160410.96 2.7809117 2.7809117 7000 -36505.782 -36505.782 -36771.297 -36771.297 256.79595 256.79595 160492.04 160492.04 -443.66506 -443.66506 Loop time of 155.229 on 1 procs for 1000 steps with 8000 atoms Performance: 0.557 ns/day, 43.119 hours/ns, 6.442 timesteps/s 94.2% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 154.8 | 154.8 | 154.8 | 0.0 | 99.73 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.069206 | 0.069206 | 0.069206 | 0.0 | 0.04 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.32321 | 0.32321 | 0.32321 | 0.0 | 0.21 Other | | 0.03216 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7807 ave 7807 max 7807 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 277436 ave 277436 max 277436 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 554872 ave 554872 max 554872 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 554872 Ave neighs/atom = 69.359 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.103480778936, Press = 4.76874539054761 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -36505.782 -36505.782 -36771.297 -36771.297 256.79595 256.79595 160492.04 160492.04 -443.66506 -443.66506 8000 -36497.859 -36497.859 -36762.565 -36762.565 256.01375 256.01375 160300.17 160300.17 962.88064 962.88064 Loop time of 155.722 on 1 procs for 1000 steps with 8000 atoms Performance: 0.555 ns/day, 43.256 hours/ns, 6.422 timesteps/s 94.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 155.31 | 155.31 | 155.31 | 0.0 | 99.73 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.068168 | 0.068168 | 0.068168 | 0.0 | 0.04 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.31507 | 0.31507 | 0.31507 | 0.0 | 0.20 Other | | 0.03217 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7778 ave 7778 max 7778 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 277948 ave 277948 max 277948 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555896 ave 555896 max 555896 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555896 Ave neighs/atom = 69.487 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.053949133443, Press = -0.480124569111264 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -36497.859 -36497.859 -36762.565 -36762.565 256.01375 256.01375 160300.17 160300.17 962.88064 962.88064 9000 -36505.855 -36505.855 -36764.59 -36764.59 250.2389 250.2389 160555.92 160555.92 -855.04074 -855.04074 Loop time of 144.411 on 1 procs for 1000 steps with 8000 atoms Performance: 0.598 ns/day, 40.114 hours/ns, 6.925 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 144.01 | 144.01 | 144.01 | 0.0 | 99.73 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.055458 | 0.055458 | 0.055458 | 0.0 | 0.04 Output | 4.4107e-05 | 4.4107e-05 | 4.4107e-05 | 0.0 | 0.00 Modify | 0.30814 | 0.30814 | 0.30814 | 0.0 | 0.21 Other | | 0.03308 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7780 ave 7780 max 7780 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 277804 ave 277804 max 277804 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555608 ave 555608 max 555608 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555608 Ave neighs/atom = 69.451 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.079918683361, Press = 0.279995688981468 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -36505.855 -36505.855 -36764.59 -36764.59 250.2389 250.2389 160555.92 160555.92 -855.04074 -855.04074 10000 -36500.67 -36500.67 -36757.73 -36757.73 248.61922 248.61922 160378.82 160378.82 249.45801 249.45801 Loop time of 136.318 on 1 procs for 1000 steps with 8000 atoms Performance: 0.634 ns/day, 37.866 hours/ns, 7.336 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 135.94 | 135.94 | 135.94 | 0.0 | 99.73 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.050918 | 0.050918 | 0.050918 | 0.0 | 0.04 Output | 3.314e-05 | 3.314e-05 | 3.314e-05 | 0.0 | 0.00 Modify | 0.29389 | 0.29389 | 0.29389 | 0.0 | 0.22 Other | | 0.02972 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7719 ave 7719 max 7719 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 277420 ave 277420 max 277420 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 554840 ave 554840 max 554840 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 554840 Ave neighs/atom = 69.355 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.143852294186, Press = 0.833318444079904 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -36500.67 -36500.67 -36757.73 -36757.73 248.61922 248.61922 160378.82 160378.82 249.45801 249.45801 11000 -36500.343 -36500.343 -36766.365 -36766.365 257.2864 257.2864 160485.54 160485.54 -394.25985 -394.25985 Loop time of 135.31 on 1 procs for 1000 steps with 8000 atoms Performance: 0.639 ns/day, 37.586 hours/ns, 7.390 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.94 | 134.94 | 134.94 | 0.0 | 99.73 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.051127 | 0.051127 | 0.051127 | 0.0 | 0.04 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.29107 | 0.29107 | 0.29107 | 0.0 | 0.22 Other | | 0.02944 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7722 ave 7722 max 7722 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 277503 ave 277503 max 277503 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555006 ave 555006 max 555006 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555006 Ave neighs/atom = 69.3757 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.183016570024, Press = 0.300940776764067 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -36500.343 -36500.343 -36766.365 -36766.365 257.2864 257.2864 160485.54 160485.54 -394.25985 -394.25985 12000 -36505.034 -36505.034 -36760.56 -36760.56 247.13546 247.13546 160370.24 160370.24 312.03724 312.03724 Loop time of 128.103 on 1 procs for 1000 steps with 8000 atoms Performance: 0.674 ns/day, 35.584 hours/ns, 7.806 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.74 | 127.74 | 127.74 | 0.0 | 99.72 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.04903 | 0.04903 | 0.04903 | 0.0 | 0.04 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.28314 | 0.28314 | 0.28314 | 0.0 | 0.22 Other | | 0.02838 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7738 ave 7738 max 7738 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 277625 ave 277625 max 277625 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555250 ave 555250 max 555250 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555250 Ave neighs/atom = 69.4062 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.336169001882, Press = -0.422376401611539 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -36505.034 -36505.034 -36760.56 -36760.56 247.13546 247.13546 160370.24 160370.24 312.03724 312.03724 13000 -36498.202 -36498.202 -36758.88 -36758.88 252.11837 252.11837 160475.72 160475.72 -218.16313 -218.16313 Loop time of 128.817 on 1 procs for 1000 steps with 8000 atoms Performance: 0.671 ns/day, 35.783 hours/ns, 7.763 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 128.45 | 128.45 | 128.45 | 0.0 | 99.72 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.049583 | 0.049583 | 0.049583 | 0.0 | 0.04 Output | 3.2902e-05 | 3.2902e-05 | 3.2902e-05 | 0.0 | 0.00 Modify | 0.28643 | 0.28643 | 0.28643 | 0.0 | 0.22 Other | | 0.02849 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7726 ave 7726 max 7726 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 277706 ave 277706 max 277706 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555412 ave 555412 max 555412 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555412 Ave neighs/atom = 69.4265 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.367289892668, Press = 1.05413854734098 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -36498.202 -36498.202 -36758.88 -36758.88 252.11837 252.11837 160475.72 160475.72 -218.16313 -218.16313 14000 -36503.597 -36503.597 -36758.945 -36758.945 246.9631 246.9631 160428.92 160428.92 -111.83793 -111.83793 Loop time of 128.779 on 1 procs for 1000 steps with 8000 atoms Performance: 0.671 ns/day, 35.772 hours/ns, 7.765 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 128.42 | 128.42 | 128.42 | 0.0 | 99.72 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.04899 | 0.04899 | 0.04899 | 0.0 | 0.04 Output | 4.3869e-05 | 4.3869e-05 | 4.3869e-05 | 0.0 | 0.00 Modify | 0.28423 | 0.28423 | 0.28423 | 0.0 | 0.22 Other | | 0.02859 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7733 ave 7733 max 7733 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 277406 ave 277406 max 277406 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 554812 ave 554812 max 554812 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 554812 Ave neighs/atom = 69.3515 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.333090842983, Press = -1.26579888445181 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -36503.597 -36503.597 -36758.945 -36758.945 246.9631 246.9631 160428.92 160428.92 -111.83793 -111.83793 15000 -36504.28 -36504.28 -36765.738 -36765.738 252.87221 252.87221 160438.29 160438.29 -193.48747 -193.48747 Loop time of 128.06 on 1 procs for 1000 steps with 8000 atoms Performance: 0.675 ns/day, 35.572 hours/ns, 7.809 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 127.7 | 127.7 | 127.7 | 0.0 | 99.72 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.048668 | 0.048668 | 0.048668 | 0.0 | 0.04 Output | 4.2915e-05 | 4.2915e-05 | 4.2915e-05 | 0.0 | 0.00 Modify | 0.28311 | 0.28311 | 0.28311 | 0.0 | 0.22 Other | | 0.02845 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7723 ave 7723 max 7723 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 277339 ave 277339 max 277339 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 554678 ave 554678 max 554678 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 554678 Ave neighs/atom = 69.3347 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.309788862571, Press = 1.77241115379817 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -36504.28 -36504.28 -36765.738 -36765.738 252.87221 252.87221 160438.29 160438.29 -193.48747 -193.48747 16000 -36503.236 -36503.236 -36765.163 -36765.163 253.32634 253.32634 160411.29 160411.29 -13.434805 -13.434805 Loop time of 128.738 on 1 procs for 1000 steps with 8000 atoms Performance: 0.671 ns/day, 35.761 hours/ns, 7.768 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 128.38 | 128.38 | 128.38 | 0.0 | 99.72 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.048671 | 0.048671 | 0.048671 | 0.0 | 0.04 Output | 4.1962e-05 | 4.1962e-05 | 4.1962e-05 | 0.0 | 0.00 Modify | 0.28275 | 0.28275 | 0.28275 | 0.0 | 0.22 Other | | 0.02827 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7660 ave 7660 max 7660 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 277537 ave 277537 max 277537 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555074 ave 555074 max 555074 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555074 Ave neighs/atom = 69.3842 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.240285285612, Press = -1.54422160901643 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -36503.236 -36503.236 -36765.163 -36765.163 253.32634 253.32634 160411.29 160411.29 -13.434805 -13.434805 17000 -36501.025 -36501.025 -36763.42 -36763.42 253.77861 253.77861 160484.6 160484.6 -360.80932 -360.80932 Loop time of 124.543 on 1 procs for 1000 steps with 8000 atoms Performance: 0.694 ns/day, 34.595 hours/ns, 8.029 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 124.19 | 124.19 | 124.19 | 0.0 | 99.72 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.047344 | 0.047344 | 0.047344 | 0.0 | 0.04 Output | 3.5048e-05 | 3.5048e-05 | 3.5048e-05 | 0.0 | 0.00 Modify | 0.27769 | 0.27769 | 0.27769 | 0.0 | 0.22 Other | | 0.02745 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7677 ave 7677 max 7677 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 277583 ave 277583 max 277583 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555166 ave 555166 max 555166 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555166 Ave neighs/atom = 69.3958 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.287400941888, Press = 1.58278948278149 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -36501.025 -36501.025 -36763.42 -36763.42 253.77861 253.77861 160484.6 160484.6 -360.80932 -360.80932 18000 -36497.633 -36497.633 -36759.985 -36759.985 253.73655 253.73655 160382.07 160382.07 318.83769 318.83769 Loop time of 117.053 on 1 procs for 1000 steps with 8000 atoms Performance: 0.738 ns/day, 32.515 hours/ns, 8.543 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 116.71 | 116.71 | 116.71 | 0.0 | 99.71 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.045005 | 0.045005 | 0.045005 | 0.0 | 0.04 Output | 3.6001e-05 | 3.6001e-05 | 3.6001e-05 | 0.0 | 0.00 Modify | 0.27174 | 0.27174 | 0.27174 | 0.0 | 0.23 Other | | 0.02629 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7654 ave 7654 max 7654 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 277597 ave 277597 max 277597 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555194 ave 555194 max 555194 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555194 Ave neighs/atom = 69.3992 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.321522766416, Press = -0.843719439784628 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -36497.633 -36497.633 -36759.985 -36759.985 253.73655 253.73655 160382.07 160382.07 318.83769 318.83769 19000 -36505.18 -36505.18 -36765.4 -36765.4 251.67558 251.67558 160444.02 160444.02 -130.67394 -130.67394 Loop time of 112.008 on 1 procs for 1000 steps with 8000 atoms Performance: 0.771 ns/day, 31.113 hours/ns, 8.928 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 111.68 | 111.68 | 111.68 | 0.0 | 99.70 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.04333 | 0.04333 | 0.04333 | 0.0 | 0.04 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.26478 | 0.26478 | 0.26478 | 0.0 | 0.24 Other | | 0.02519 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7744 ave 7744 max 7744 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 277551 ave 277551 max 277551 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555102 ave 555102 max 555102 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555102 Ave neighs/atom = 69.3877 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.378368523318, Press = 0.865769574228346 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -36505.18 -36505.18 -36765.4 -36765.4 251.67558 251.67558 160444.02 160444.02 -130.67394 -130.67394 20000 -36502.645 -36502.645 -36762.979 -36762.979 251.78511 251.78511 160441 160441 -73.0261 -73.0261 Loop time of 111.264 on 1 procs for 1000 steps with 8000 atoms Performance: 0.777 ns/day, 30.907 hours/ns, 8.988 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 110.93 | 110.93 | 110.93 | 0.0 | 99.70 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.042745 | 0.042745 | 0.042745 | 0.0 | 0.04 Output | 3.4809e-05 | 3.4809e-05 | 3.4809e-05 | 0.0 | 0.00 Modify | 0.26439 | 0.26439 | 0.26439 | 0.0 | 0.24 Other | | 0.02506 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7638 ave 7638 max 7638 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 277696 ave 277696 max 277696 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555392 ave 555392 max 555392 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555392 Ave neighs/atom = 69.424 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 253.360540194563, Press = -0.207519669855601 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 26.63 | 26.63 | 26.63 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -36502.645 -36502.645 -36762.979 -36762.979 251.78511 251.78511 160441 160441 -73.0261 -73.0261 21000 -36499.178 -36499.178 -36760.35 -36760.35 252.59529 252.59529 160407.12 160407.12 157.10816 157.10816 Loop time of 110.984 on 1 procs for 1000 steps with 8000 atoms Performance: 0.778 ns/day, 30.829 hours/ns, 9.010 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 110.65 | 110.65 | 110.65 | 0.0 | 99.70 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.042953 | 0.042953 | 0.042953 | 0.0 | 0.04 Output | 3.4094e-05 | 3.4094e-05 | 3.4094e-05 | 0.0 | 0.00 Modify | 0.26622 | 0.26622 | 0.26622 | 0.0 | 0.24 Other | | 0.02522 | | | 0.02 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 7721 ave 7721 max 7721 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 277630 ave 277630 max 277630 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 555260 ave 555260 max 555260 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 555260 Ave neighs/atom = 69.4075 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T253.15.out" else "print 'not_converged' file output/vol_T253.15.out" print '${V}' file output/vol_T253.15.out 160423.500463668 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0