# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 5.355957195162773*${_u_distance} variable latticeconst_converted equal 5.355957195162773*1 lattice diamond ${latticeconst_converted} lattice diamond 5.35595719516277 Lattice spacing in x,y,z = 5.3559572 5.3559572 5.3559572 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (53.559572 53.559572 53.559572) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0 0 0) to (53.559572 53.559572 53.559572) create_atoms CPU = 0.009 seconds variable mass_converted equal 28.0855*${_u_mass} variable mass_converted equal 28.0855*1 kim_interactions Si WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Si #=== BEGIN kim interactions ================================== variable kim_update equal 0 variable kim_periodic equal 1 pair_style reax/c NULL safezone 3.0 mincap 100 pair_coeff * * /tmp/kim-shared-library-parameter-file-directory-XXXXXXzVmEJa/ffield-CaSiOH-lammps.reax.txt Si WARNING: Van der Waals parameters for element SI indicate inner wall+shielding, but earlier atoms indicate a different van der Waals method. This may cause division-by-zero errors. Keeping van der Waals setting for earlier atoms. (src/REAXFF/reaxff_ffield.cpp:251) WARNING: Changed valency_val to valency_boc for X (src/REAXFF/reaxff_ffield.cpp:296) fix reaxqeq all qeq/reax 1 0.0 10.0 1.0e-6 reax/c #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 28.0855 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 153642.474252245 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 153642.474252245/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 153642.474252245/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 153642.474252245/(1*1*${_u_distance}) variable V0_metal equal 153642.474252245/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 153642.474252245*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 153642.474252245 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1000 timestep ${timestep_converted} timestep 1 variable temp_converted equal 333.15*${_u_temperature} variable temp_converted equal 333.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1000 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*0.986923266716013 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1000 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 333.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 100 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 100 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 100 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 100 iso 0 0 1000 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/23.0605480120695 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/23.0605480120695 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/0.986923266716013 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "333.15 - 0.2" variable T_up equal "333.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/SM_714124634215_000#item-citation - pair reaxff command: @Article{Aktulga12, author = {H. M. Aktulga, J. C. Fogarty, S. A. Pandit, A. Y. Grama}, title = {Parallel reactive molecular dynamics: Numerical methods and algorithmic techniques}, journal = {Parallel Computing}, year = 2012, volume = 38, pages = {245--259} } - fix qeq/reaxff command: @Article{Aktulga12, author = {H. M. Aktulga, J. C. Fogarty, S. A. Pandit, A. Y. Grama}, title = {Parallel reactive molecular dynamics: Numerical methods and algorithmic techniques}, journal = {Parallel Computing}, year = 2012, volume = 38, pages = {245--259} } CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 4000, page size: 100000 master list distance cutoff = 12 ghost atom cutoff = 12 binsize = 6, bins = 9 9 9 2 neighbor lists, perpetual/occasional/extra = 2 0 0 (1) pair reax/c, perpetual attributes: half, newton off, ghost pair build: half/bin/newtoff/ghost stencil: full/ghost/bin/3d bin: standard (2) fix qeq/reax, perpetual, copy from (1) attributes: half, newton off pair build: copy stencil: none bin: none Per MPI rank memory allocation (min/avg/max) = 893.6 | 893.6 | 893.6 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -830701.27 -36022.616 -838644.73 -36367.077 333.15 333.15 153642.47 153642.47 2363.3917 2394.7067 1000 -822024.78 -35646.368 -830275.22 -36004.141 346.025 346.025 153401.14 153401.14 464.00244 470.15047 Loop time of 1833.34 on 1 procs for 1000 steps with 8000 atoms Performance: 0.047 ns/day, 509.261 hours/ns, 0.545 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1457.4 | 1457.4 | 1457.4 | 0.0 | 79.49 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.46844 | 0.46844 | 0.46844 | 0.0 | 0.03 Output | 0.00060944 | 0.00060944 | 0.00060944 | 0.0 | 0.00 Modify | 375.3 | 375.3 | 375.3 | 0.0 | 20.47 Other | | 0.1969 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15171 ave 15171 max 15171 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.8731e+06 ave 1.8731e+06 max 1.8731e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1873098 Ave neighs/atom = 234.13725 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.2 | 892.2 | 892.2 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -822024.78 -35646.368 -830275.22 -36004.141 346.025 346.025 153401.14 153401.14 464.00244 470.15047 2000 -822982.96 -35687.918 -830338.97 -36006.905 308.51227 308.51227 153532.64 153532.64 -747.63041 -757.53651 Loop time of 1749.1 on 1 procs for 1000 steps with 8000 atoms Performance: 0.049 ns/day, 485.860 hours/ns, 0.572 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1384.7 | 1384.7 | 1384.7 | 0.0 | 79.16 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.46193 | 0.46193 | 0.46193 | 0.0 | 0.03 Output | 0.00035556 | 0.00035556 | 0.00035556 | 0.0 | 0.00 Modify | 363.78 | 363.78 | 363.78 | 0.0 | 20.80 Other | | 0.1863 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15801 ave 15801 max 15801 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.8336e+06 ave 1.8336e+06 max 1.8336e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1833599 Ave neighs/atom = 229.19987 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.2 | 892.2 | 892.2 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -822982.96 -35687.918 -830338.97 -36006.905 308.51227 308.51227 153532.64 153532.64 -747.63041 -757.53651 3000 -822374.85 -35661.549 -830471.04 -36012.632 339.55532 339.55532 153509.85 153509.85 -191.24891 -193.78296 Loop time of 1687.52 on 1 procs for 1000 steps with 8000 atoms Performance: 0.051 ns/day, 468.756 hours/ns, 0.593 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1330.6 | 1330.6 | 1330.6 | 0.0 | 78.85 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.44906 | 0.44906 | 0.44906 | 0.0 | 0.03 Output | 0.00033275 | 0.00033275 | 0.00033275 | 0.0 | 0.00 Modify | 356.24 | 356.24 | 356.24 | 0.0 | 21.11 Other | | 0.1827 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15863 ave 15863 max 15863 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83304e+06 ave 1.83304e+06 max 1.83304e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1833040 Ave neighs/atom = 229.13 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.2 | 892.2 | 892.2 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -822374.85 -35661.549 -830471.04 -36012.632 339.55532 339.55532 153509.85 153509.85 -191.24891 -193.78296 4000 -822811.52 -35680.484 -830628.86 -36019.476 327.86072 327.86072 153583.76 153583.76 -652.12282 -660.76345 Loop time of 1666.73 on 1 procs for 1000 steps with 8000 atoms Performance: 0.052 ns/day, 462.980 hours/ns, 0.600 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1313.2 | 1313.2 | 1313.2 | 0.0 | 78.79 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.44431 | 0.44431 | 0.44431 | 0.0 | 0.03 Output | 0.00036233 | 0.00036233 | 0.00036233 | 0.0 | 0.00 Modify | 352.91 | 352.91 | 352.91 | 0.0 | 21.17 Other | | 0.1794 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15785 ave 15785 max 15785 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83329e+06 ave 1.83329e+06 max 1.83329e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1833287 Ave neighs/atom = 229.16088 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.2 | 892.2 | 892.2 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -822811.52 -35680.484 -830628.86 -36019.476 327.86072 327.86072 153583.76 153583.76 -652.12282 -660.76345 5000 -822517.49 -35667.734 -830457.47 -36012.044 333.0038 333.0038 153519.82 153519.82 -338.1025 -342.58236 Loop time of 1765.5 on 1 procs for 1000 steps with 8000 atoms Performance: 0.049 ns/day, 490.415 hours/ns, 0.566 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1397 | 1397 | 1397 | 0.0 | 79.13 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.47 | 0.47 | 0.47 | 0.0 | 0.03 Output | 0.0004593 | 0.0004593 | 0.0004593 | 0.0 | 0.00 Modify | 367.85 | 367.85 | 367.85 | 0.0 | 20.84 Other | | 0.1892 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15810 ave 15810 max 15810 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83214e+06 ave 1.83214e+06 max 1.83214e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1832145 Ave neighs/atom = 229.01812 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 338.68952140121, Press = -449.564229633006 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.2 | 892.2 | 892.2 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -822517.49 -35667.734 -830457.47 -36012.044 333.0038 333.0038 153519.82 153519.82 -338.1025 -342.58236 6000 -822673.66 -35674.506 -830643.54 -36020.113 334.25809 334.25809 153345.41 153345.41 793.75366 804.2709 Loop time of 1891.56 on 1 procs for 1000 steps with 8000 atoms Performance: 0.046 ns/day, 525.434 hours/ns, 0.529 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1504.9 | 1504.9 | 1504.9 | 0.0 | 79.56 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.50065 | 0.50065 | 0.50065 | 0.0 | 0.03 Output | 0.00029062 | 0.00029062 | 0.00029062 | 0.0 | 0.00 Modify | 385.96 | 385.96 | 385.96 | 0.0 | 20.40 Other | | 0.2023 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15842 ave 15842 max 15842 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.8326e+06 ave 1.8326e+06 max 1.8326e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1832605 Ave neighs/atom = 229.07563 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.882896174, Press = -32.2827045546739 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.3 | 892.3 | 892.3 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -822673.66 -35674.506 -830643.54 -36020.113 334.25809 334.25809 153345.41 153345.41 793.75366 804.2709 7000 -822646.47 -35673.327 -830674.62 -36021.461 336.70205 336.70205 153367.47 153367.47 852.4567 863.75176 Loop time of 1779.57 on 1 procs for 1000 steps with 8000 atoms Performance: 0.049 ns/day, 494.324 hours/ns, 0.562 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1408.4 | 1408.4 | 1408.4 | 0.0 | 79.14 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.47353 | 0.47353 | 0.47353 | 0.0 | 0.03 Output | 0.00028359 | 0.00028359 | 0.00028359 | 0.0 | 0.00 Modify | 370.49 | 370.49 | 370.49 | 0.0 | 20.82 Other | | 0.1917 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15861 ave 15861 max 15861 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83486e+06 ave 1.83486e+06 max 1.83486e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1834861 Ave neighs/atom = 229.35763 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.408372598349, Press = -10.4717939305122 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.3 | 892.3 | 892.3 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -822646.47 -35673.327 -830674.62 -36021.461 336.70205 336.70205 153367.47 153367.47 852.4567 863.75176 8000 -822522.04 -35667.931 -830608.1 -36018.576 339.13068 339.13068 153384.81 153384.81 620.39209 628.61229 Loop time of 1659.11 on 1 procs for 1000 steps with 8000 atoms Performance: 0.052 ns/day, 460.865 hours/ns, 0.603 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1307.9 | 1307.9 | 1307.9 | 0.0 | 78.83 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.44182 | 0.44182 | 0.44182 | 0.0 | 0.03 Output | 0.00032698 | 0.00032698 | 0.00032698 | 0.0 | 0.00 Modify | 350.58 | 350.58 | 350.58 | 0.0 | 21.13 Other | | 0.1796 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15879 ave 15879 max 15879 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83516e+06 ave 1.83516e+06 max 1.83516e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1835163 Ave neighs/atom = 229.39538 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.091663354464, Press = -6.93035573680412 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.3 | 892.3 | 892.3 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -822522.04 -35667.931 -830608.1 -36018.576 339.13068 339.13068 153384.81 153384.81 620.39209 628.61229 9000 -822775.43 -35678.919 -830591.02 -36017.835 327.78688 327.78688 153556.41 153556.41 -493.0006 -499.53286 Loop time of 1696.37 on 1 procs for 1000 steps with 8000 atoms Performance: 0.051 ns/day, 471.214 hours/ns, 0.589 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1337.7 | 1337.7 | 1337.7 | 0.0 | 78.86 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.44851 | 0.44851 | 0.44851 | 0.0 | 0.03 Output | 0.00031869 | 0.00031869 | 0.00031869 | 0.0 | 0.00 Modify | 358.06 | 358.06 | 358.06 | 0.0 | 21.11 Other | | 0.182 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15832 ave 15832 max 15832 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83506e+06 ave 1.83506e+06 max 1.83506e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1835058 Ave neighs/atom = 229.38225 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.214901606749, Press = -6.29864258537181 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.2 | 892.2 | 892.2 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -822775.43 -35678.919 -830591.02 -36017.835 327.78688 327.78688 153556.41 153556.41 -493.0006 -499.53286 10000 -822497 -35666.845 -830469.89 -36012.583 334.3841 334.3841 153403.59 153403.59 468.21341 474.41723 Loop time of 1851.19 on 1 procs for 1000 steps with 8000 atoms Performance: 0.047 ns/day, 514.219 hours/ns, 0.540 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1471.4 | 1471.4 | 1471.4 | 0.0 | 79.48 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.48157 | 0.48157 | 0.48157 | 0.0 | 0.03 Output | 0.00027979 | 0.00027979 | 0.00027979 | 0.0 | 0.00 Modify | 379.14 | 379.14 | 379.14 | 0.0 | 20.48 Other | | 0.1958 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15785 ave 15785 max 15785 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83192e+06 ave 1.83192e+06 max 1.83192e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1831918 Ave neighs/atom = 228.98975 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.20832237437, Press = -12.2702404926122 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.3 | 892.3 | 892.3 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -822497 -35666.845 -830469.89 -36012.583 334.3841 334.3841 153403.59 153403.59 468.21341 474.41723 11000 -822702.39 -35675.752 -830573.64 -36017.082 330.12141 330.12141 153367.01 153367.01 640.85747 649.34883 Loop time of 1734.24 on 1 procs for 1000 steps with 8000 atoms Performance: 0.050 ns/day, 481.734 hours/ns, 0.577 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1371.5 | 1371.5 | 1371.5 | 0.0 | 79.09 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.45585 | 0.45585 | 0.45585 | 0.0 | 0.03 Output | 0.00052237 | 0.00052237 | 0.00052237 | 0.0 | 0.00 Modify | 362.07 | 362.07 | 362.07 | 0.0 | 20.88 Other | | 0.1836 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15833 ave 15833 max 15833 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83403e+06 ave 1.83403e+06 max 1.83403e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1834033 Ave neighs/atom = 229.25412 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.341045831314, Press = -2.31245109702119 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.3 | 892.3 | 892.3 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -822702.39 -35675.752 -830573.64 -36017.082 330.12141 330.12141 153367.01 153367.01 640.85747 649.34883 12000 -822515.8 -35667.661 -830441.8 -36011.364 332.41744 332.41744 153575.06 153575.06 -620.25347 -628.47183 Loop time of 1857.04 on 1 procs for 1000 steps with 8000 atoms Performance: 0.047 ns/day, 515.843 hours/ns, 0.538 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1475.3 | 1475.3 | 1475.3 | 0.0 | 79.45 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.48428 | 0.48428 | 0.48428 | 0.0 | 0.03 Output | 0.0002818 | 0.0002818 | 0.0002818 | 0.0 | 0.00 Modify | 381.03 | 381.03 | 381.03 | 0.0 | 20.52 Other | | 0.1945 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15857 ave 15857 max 15857 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83459e+06 ave 1.83459e+06 max 1.83459e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1834592 Ave neighs/atom = 229.324 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.481875341387, Press = -1.53209798071053 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.2 | 892.2 | 892.2 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -822515.8 -35667.661 -830441.8 -36011.364 332.41744 332.41744 153575.06 153575.06 -620.25347 -628.47183 13000 -822752.83 -35677.939 -830674.8 -36021.468 332.24874 332.24874 153593.91 153593.91 -609.11343 -617.18419 Loop time of 1797.73 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 499.369 hours/ns, 0.556 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1424.5 | 1424.5 | 1424.5 | 0.0 | 79.24 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.47442 | 0.47442 | 0.47442 | 0.0 | 0.03 Output | 0.00046431 | 0.00046431 | 0.00046431 | 0.0 | 0.00 Modify | 372.52 | 372.52 | 372.52 | 0.0 | 20.72 Other | | 0.1923 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15810 ave 15810 max 15810 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83242e+06 ave 1.83242e+06 max 1.83242e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1832421 Ave neighs/atom = 229.05263 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.398466134644, Press = -3.48410472180111 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.1 | 892.1 | 892.1 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -822752.83 -35677.939 -830674.8 -36021.468 332.24874 332.24874 153593.91 153593.91 -609.11343 -617.18419 14000 -822508.91 -35667.362 -830522.91 -36014.882 336.1081 336.1081 153359.59 153359.59 689.07442 698.20466 Loop time of 1666.81 on 1 procs for 1000 steps with 8000 atoms Performance: 0.052 ns/day, 463.004 hours/ns, 0.600 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1314.5 | 1314.5 | 1314.5 | 0.0 | 78.86 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.43776 | 0.43776 | 0.43776 | 0.0 | 0.03 Output | 0.00027066 | 0.00027066 | 0.00027066 | 0.0 | 0.00 Modify | 351.7 | 351.7 | 351.7 | 0.0 | 21.10 Other | | 0.1797 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15773 ave 15773 max 15773 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83067e+06 ave 1.83067e+06 max 1.83067e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1830674 Ave neighs/atom = 228.83425 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.299066464, Press = -4.02741708732968 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.3 | 892.3 | 892.3 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -822508.91 -35667.362 -830522.91 -36014.882 336.1081 336.1081 153359.59 153359.59 689.07442 698.20466 15000 -822634 -35672.786 -830635.34 -36019.757 335.57758 335.57758 153373.47 153373.47 746.67814 756.57163 Loop time of 1822.94 on 1 procs for 1000 steps with 8000 atoms Performance: 0.047 ns/day, 506.372 hours/ns, 0.549 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1446.2 | 1446.2 | 1446.2 | 0.0 | 79.34 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.48119 | 0.48119 | 0.48119 | 0.0 | 0.03 Output | 0.0003809 | 0.0003809 | 0.0003809 | 0.0 | 0.00 Modify | 376.02 | 376.02 | 376.02 | 0.0 | 20.63 Other | | 0.194 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15869 ave 15869 max 15869 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.8348e+06 ave 1.8348e+06 max 1.8348e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1834804 Ave neighs/atom = 229.3505 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.282268850501, Press = -1.69039021735832 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.3 | 892.3 | 892.3 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -822634 -35672.786 -830635.34 -36019.757 335.57758 335.57758 153373.47 153373.47 746.67814 756.57163 16000 -822823.14 -35680.988 -830740.62 -36024.323 332.06042 332.06042 153489.98 153489.98 67.089327 67.97826 Loop time of 1926.12 on 1 procs for 1000 steps with 8000 atoms Performance: 0.045 ns/day, 535.033 hours/ns, 0.519 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1533.9 | 1533.9 | 1533.9 | 0.0 | 79.64 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.50366 | 0.50366 | 0.50366 | 0.0 | 0.03 Output | 0.00035938 | 0.00035938 | 0.00035938 | 0.0 | 0.00 Modify | 391.51 | 391.51 | 391.51 | 0.0 | 20.33 Other | | 0.2033 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15803 ave 15803 max 15803 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83435e+06 ave 1.83435e+06 max 1.83435e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1834354 Ave neighs/atom = 229.29425 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.21873272566, Press = -1.66674166850165 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.2 | 892.2 | 892.2 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -822823.14 -35680.988 -830740.62 -36024.323 332.06042 332.06042 153489.98 153489.98 67.089327 67.97826 17000 -822564.99 -35669.794 -830562.85 -36016.614 335.43165 335.43165 153564.19 153564.19 -458.32668 -464.39951 Loop time of 1891.56 on 1 procs for 1000 steps with 8000 atoms Performance: 0.046 ns/day, 525.432 hours/ns, 0.529 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1504.6 | 1504.6 | 1504.6 | 0.0 | 79.54 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.49005 | 0.49005 | 0.49005 | 0.0 | 0.03 Output | 0.00030105 | 0.00030105 | 0.00030105 | 0.0 | 0.00 Modify | 386.27 | 386.27 | 386.27 | 0.0 | 20.42 Other | | 0.1991 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15770 ave 15770 max 15770 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83304e+06 ave 1.83304e+06 max 1.83304e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1833039 Ave neighs/atom = 229.12987 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.122960491093, Press = -3.04688809709768 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.2 | 892.2 | 892.2 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -822564.99 -35669.794 -830562.85 -36016.614 335.43165 335.43165 153564.19 153564.19 -458.32668 -464.39951 18000 -822713.99 -35676.255 -830556.63 -36016.344 328.92125 328.92125 153483.67 153483.67 -95.973506 -97.245155 Loop time of 1916.78 on 1 procs for 1000 steps with 8000 atoms Performance: 0.045 ns/day, 532.440 hours/ns, 0.522 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1526 | 1526 | 1526 | 0.0 | 79.61 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.49864 | 0.49864 | 0.49864 | 0.0 | 0.03 Output | 0.00027856 | 0.00027856 | 0.00027856 | 0.0 | 0.00 Modify | 390.05 | 390.05 | 390.05 | 0.0 | 20.35 Other | | 0.2007 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15793 ave 15793 max 15793 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83236e+06 ave 1.83236e+06 max 1.83236e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1832355 Ave neighs/atom = 229.04438 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.023236840128, Press = -2.35622256191993 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.2 | 892.2 | 892.2 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -822713.99 -35676.255 -830556.63 -36016.344 328.92125 328.92125 153483.67 153483.67 -95.973506 -97.245155 19000 -822618.21 -35672.102 -830459.27 -36012.122 328.85496 328.85496 153474.24 153474.24 -211.78776 -214.59395 Loop time of 1792.01 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 497.781 hours/ns, 0.558 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1420.9 | 1420.9 | 1420.9 | 0.0 | 79.29 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.46861 | 0.46861 | 0.46861 | 0.0 | 0.03 Output | 0.00036565 | 0.00036565 | 0.00036565 | 0.0 | 0.00 Modify | 370.41 | 370.41 | 370.41 | 0.0 | 20.67 Other | | 0.192 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15836 ave 15836 max 15836 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83322e+06 ave 1.83322e+06 max 1.83322e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1833217 Ave neighs/atom = 229.15213 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.994923707566, Press = -1.82676046983009 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.2 | 892.2 | 892.2 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -822618.21 -35672.102 -830459.27 -36012.122 328.85496 328.85496 153474.24 153474.24 -211.78776 -214.59395 20000 -822738.47 -35677.317 -830648.83 -36020.342 331.76169 331.76169 153432.15 153432.15 312.12995 316.26567 Loop time of 1813.59 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 503.774 hours/ns, 0.551 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1439.9 | 1439.9 | 1439.9 | 0.0 | 79.39 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.4755 | 0.4755 | 0.4755 | 0.0 | 0.03 Output | 0.000276 | 0.000276 | 0.000276 | 0.0 | 0.00 Modify | 373.04 | 373.04 | 373.04 | 0.0 | 20.57 Other | | 0.1941 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15857 ave 15857 max 15857 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.8331e+06 ave 1.8331e+06 max 1.8331e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1833095 Ave neighs/atom = 229.13688 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.953321982966, Press = -0.45165223227208 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.2 | 892.2 | 892.2 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -822738.47 -35677.317 -830648.83 -36020.342 331.76169 331.76169 153432.15 153432.15 312.12995 316.26567 21000 -822563.04 -35669.709 -830609.97 -36018.657 337.48953 337.48953 153576.45 153576.45 -490.35199 -496.84915 Loop time of 1878.52 on 1 procs for 1000 steps with 8000 atoms Performance: 0.046 ns/day, 521.811 hours/ns, 0.532 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1493.4 | 1493.4 | 1493.4 | 0.0 | 79.50 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.49233 | 0.49233 | 0.49233 | 0.0 | 0.03 Output | 0.00028069 | 0.00028069 | 0.00028069 | 0.0 | 0.00 Modify | 384.4 | 384.4 | 384.4 | 0.0 | 20.46 Other | | 0.1999 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15812 ave 15812 max 15812 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83338e+06 ave 1.83338e+06 max 1.83338e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1833376 Ave neighs/atom = 229.172 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.959130608726, Press = -0.803705448432648 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.2 | 892.2 | 892.2 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -822563.04 -35669.709 -830609.97 -36018.657 337.48953 337.48953 153576.45 153576.45 -490.35199 -496.84915 22000 -822630.43 -35672.631 -830544.75 -36015.829 331.9278 331.9278 153468.83 153468.83 83.050522 84.150941 Loop time of 1931.27 on 1 procs for 1000 steps with 8000 atoms Performance: 0.045 ns/day, 536.464 hours/ns, 0.518 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1537.8 | 1537.8 | 1537.8 | 0.0 | 79.63 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.50621 | 0.50621 | 0.50621 | 0.0 | 0.03 Output | 0.00034455 | 0.00034455 | 0.00034455 | 0.0 | 0.00 Modify | 392.73 | 392.73 | 392.73 | 0.0 | 20.34 Other | | 0.2027 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15880 ave 15880 max 15880 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83141e+06 ave 1.83141e+06 max 1.83141e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1831406 Ave neighs/atom = 228.92575 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.042944445779, Press = -2.59586607270263 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.2 | 892.2 | 892.2 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 22000 -822630.43 -35672.631 -830544.75 -36015.829 331.9278 331.9278 153468.83 153468.83 83.050522 84.150942 23000 -822545.98 -35668.969 -830513.45 -36014.471 334.1567 334.1567 153411.96 153411.96 328.25022 332.59953 Loop time of 1781.52 on 1 procs for 1000 steps with 8000 atoms Performance: 0.048 ns/day, 494.867 hours/ns, 0.561 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1410.9 | 1410.9 | 1410.9 | 0.0 | 79.20 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.46884 | 0.46884 | 0.46884 | 0.0 | 0.03 Output | 0.00032805 | 0.00032805 | 0.00032805 | 0.0 | 0.00 Modify | 369.95 | 369.95 | 369.95 | 0.0 | 20.77 Other | | 0.189 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15895 ave 15895 max 15895 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83341e+06 ave 1.83341e+06 max 1.83341e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1833413 Ave neighs/atom = 229.17663 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.037415211785, Press = -1.46493985158981 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.2 | 892.2 | 892.2 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 23000 -822545.98 -35668.969 -830513.45 -36014.471 334.1567 334.1567 153411.96 153411.96 328.25022 332.59953 24000 -822812.14 -35680.511 -830585.25 -36017.585 326.0054 326.0054 153489.77 153489.77 -101.01348 -102.35191 Loop time of 1920.4 on 1 procs for 1000 steps with 8000 atoms Performance: 0.045 ns/day, 533.444 hours/ns, 0.521 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1529.9 | 1529.9 | 1529.9 | 0.0 | 79.66 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.50041 | 0.50041 | 0.50041 | 0.0 | 0.03 Output | 0.00036001 | 0.00036001 | 0.00036001 | 0.0 | 0.00 Modify | 389.84 | 389.84 | 389.84 | 0.0 | 20.30 Other | | 0.2003 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15830 ave 15830 max 15830 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83397e+06 ave 1.83397e+06 max 1.83397e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1833973 Ave neighs/atom = 229.24662 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.016868204288, Press = -0.789695899127906 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.2 | 892.2 | 892.2 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 24000 -822812.14 -35680.511 -830585.25 -36017.585 326.0054 326.0054 153489.77 153489.77 -101.01348 -102.35191 25000 -822703.08 -35675.782 -830527.11 -36015.064 328.14121 328.14121 153591.05 153591.05 -715.55149 -725.03254 Loop time of 1827.06 on 1 procs for 1000 steps with 8000 atoms Performance: 0.047 ns/day, 507.516 hours/ns, 0.547 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1449.2 | 1449.2 | 1449.2 | 0.0 | 79.32 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.47944 | 0.47944 | 0.47944 | 0.0 | 0.03 Output | 0.00031472 | 0.00031472 | 0.00031472 | 0.0 | 0.00 Modify | 377.17 | 377.17 | 377.17 | 0.0 | 20.64 Other | | 0.1942 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15883 ave 15883 max 15883 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83311e+06 ave 1.83311e+06 max 1.83311e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1833107 Ave neighs/atom = 229.13837 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.040004326275, Press = -1.18177316150536 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.2 | 892.2 | 892.2 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 25000 -822703.08 -35675.782 -830527.11 -36015.064 328.14121 328.14121 153591.05 153591.05 -715.55149 -725.03254 26000 -822419.04 -35663.465 -830478.36 -36012.95 338.00902 338.00902 153548.55 153548.55 -396.4428 -401.69567 Loop time of 1657.01 on 1 procs for 1000 steps with 8000 atoms Performance: 0.052 ns/day, 460.281 hours/ns, 0.603 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1306.4 | 1306.4 | 1306.4 | 0.0 | 78.84 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.43651 | 0.43651 | 0.43651 | 0.0 | 0.03 Output | 0.00027154 | 0.00027154 | 0.00027154 | 0.0 | 0.00 Modify | 350.04 | 350.04 | 350.04 | 0.0 | 21.12 Other | | 0.1809 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15787 ave 15787 max 15787 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83181e+06 ave 1.83181e+06 max 1.83181e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1831814 Ave neighs/atom = 228.97675 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.083491776182, Press = -1.9184634431095 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.2 | 892.2 | 892.2 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 26000 -822419.04 -35663.465 -830478.36 -36012.95 338.00902 338.00902 153548.55 153548.55 -396.4428 -401.69567 27000 -822753.99 -35677.989 -830659.83 -36020.819 331.57225 331.57225 153312.35 153312.35 1000.9018 1014.1637 Loop time of 1696.44 on 1 procs for 1000 steps with 8000 atoms Performance: 0.051 ns/day, 471.234 hours/ns, 0.589 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1339.5 | 1339.5 | 1339.5 | 0.0 | 78.96 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.44951 | 0.44951 | 0.44951 | 0.0 | 0.03 Output | 0.00029506 | 0.00029506 | 0.00029506 | 0.0 | 0.00 Modify | 356.32 | 356.32 | 356.32 | 0.0 | 21.00 Other | | 0.1838 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15822 ave 15822 max 15822 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83227e+06 ave 1.83227e+06 max 1.83227e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1832268 Ave neighs/atom = 229.0335 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.086065899231, Press = -1.24087853510662 next a jump SELF top variable a loop 2000 run 1000 Per MPI rank memory allocation (min/avg/max) = 892.3 | 892.3 | 892.3 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 27000 -822753.99 -35677.989 -830659.83 -36020.819 331.57225 331.57225 153312.35 153312.35 1000.9018 1014.1637 28000 -822663.33 -35674.058 -830560.09 -36016.494 331.19159 331.19159 153476.97 153476.97 -72.192671 -73.149224 Loop time of 1879.91 on 1 procs for 1000 steps with 8000 atoms Performance: 0.046 ns/day, 522.198 hours/ns, 0.532 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 1493.3 | 1493.3 | 1493.3 | 0.0 | 79.44 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.50345 | 0.50345 | 0.50345 | 0.0 | 0.03 Output | 0.00032084 | 0.00032084 | 0.00032084 | 0.0 | 0.00 Modify | 385.89 | 385.89 | 385.89 | 0.0 | 20.53 Other | | 0.2005 | | | 0.01 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 15829 ave 15829 max 15829 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 1.83585e+06 ave 1.83585e+06 max 1.83585e+06 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 1835854 Ave neighs/atom = 229.48175 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T333.15.out" else "print 'not_converged' file output/vol_T333.15.out" print '${V}' file output/vol_T333.15.out 153482.385913286 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0