AttributeError: module 'posixpath' has no attribute 'exits' Traceback (most recent call last): File "/usr/local/bin/run_openkim_job.py", line 552, in execute_in_place(runner, runner_driver, subject, subject_driver, env) File "/usr/local/bin/run_openkim_job.py", line 396, in execute_in_place if os.path.exits(KIM_TOOLS_LOG_FILE): AttributeError: module 'posixpath' has no attribute 'exits' output/pipeline.stdout: ----------------------- ============================================================================================================================================================ Finished with optimization============================================================================================================================================================ Final lattice Constants: a = [2.74940314] Angstroms, c = [4.48975653] Angstroms, c/a = 1.632993 Total energy: -15.6277885327629 eV Cohesive energy: -3.906947133190725 eV/atom============================================================================================================================================================ output/pipeline.stderr: ----------------------- /anvil/scratch/x-bwaters/jobs/jobs/aeb12a3a-cc28-4c27-95ec-642ffb9d481f-007/TE_814033190670_005-and-MO_786012902615_001-1752090910/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Pd__TE_814033190670_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:181: FutureWarning: Please use atoms.calc = calc atoms.set_calculator(calc)/anvil/scratch/x-bwaters/jobs/jobs/aeb12a3a-cc28-4c27-95ec-642ffb9d481f-007/TE_814033190670_005-and-MO_786012902615_001-1752090910/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Pd__TE_814033190670_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:334: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) for init_guess_c in np.arange(/anvil/scratch/x-bwaters/jobs/jobs/aeb12a3a-cc28-4c27-95ec-642ffb9d481f-007/TE_814033190670_005-and-MO_786012902615_001-1752090910/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Pd__TE_814033190670_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:134: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) return math.sqrt(hrDist * hrDist + vDist * vDist)/anvil/scratch/x-bwaters/jobs/jobs/aeb12a3a-cc28-4c27-95ec-642ffb9d481f-007/TE_814033190670_005-and-MO_786012902615_001-1752090910/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Pd__TE_814033190670_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:420: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) float(minLatticeConstants[1] / minLatticeConstants[0]),/anvil/scratch/x-bwaters/jobs/jobs/aeb12a3a-cc28-4c27-95ec-642ffb9d481f-007/TE_814033190670_005-and-MO_786012902615_001-1752090910/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Pd__TE_814033190670_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:429: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) float(minLatticeConstants[0]),/anvil/scratch/x-bwaters/jobs/jobs/aeb12a3a-cc28-4c27-95ec-642ffb9d481f-007/TE_814033190670_005-and-MO_786012902615_001-1752090910/staged_job_files/repository/te/LatticeConstantHexagonalEnergy_hcp_Pd__TE_814033190670_005/../../td/LatticeConstantHexagonalEnergy__TD_942334626465_005/runner:430: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) float(minLatticeConstants[1]),{"realtime":3.40,"usertime":4.64,"systime":4.38,"memmax":93720,"memavg":0} output/kim.log: --------------- 2025-07-09:16:01:09EDT * 2 * information * 0x5646ff456110_0x5646ff3bb0d0 * KIM_LogImplementation.cpp:243 * Log object renamed. ID changed from '0x5646ff3bb0d0'.2025-07-09:16:01:09EDT * 3 * information * 0x5646ff456110_0x5646ff3bb0d0 * EAM_Implementation.cpp:1562 * Register argument supportStatus2025-07-09:16:01:09EDT * 4 * information * 0x5646ff456110_0x5646ff3bb0d0 * EAM_Implementation.cpp:1581 * Register callback supportStatus2025-07-09:16:01:10EDT * 0 * information * 0x5646ff27fd90_0x5646ff280be0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:01:10EDT * 0 * information * 0x5646ff27fd90 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:01:10EDT * 0 * information * 0x5646ff280d40_0x5646ff280790 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:01:10EDT * 0 * information * 0x5646ff280d40 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:01:10EDT * 0 * information * 0x5646ff29cbf0_0x5646ff280c90 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:01:10EDT * 0 * information * 0x5646ff29cbf0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:01:10EDT * 0 * information * 0x5646ff29f570_0x5646ff282950 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:01:10EDT * 0 * information * 0x5646ff29f570 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:01:10EDT * 0 * information * 0x5646ff36c630_0x5646ff29da40 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:01:10EDT * 0 * information * 0x5646ff36c630 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:01:10EDT * 0 * information * 0x5646ff3ba0c0_0x5646ff31fc10 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:01:10EDT * 0 * information * 0x5646ff3ba0c0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:01:10EDT * 0 * information * 0x5646ff3e83d0_0x5646ff36d6a0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:01:10EDT * 0 * information * 0x5646ff3e83d0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:01:10EDT * 0 * warning * 0x5646ff456110 * EAM_Implementation.hpp:475 * Particles has density value outside of embedding function interpolation domain, but as LAMMPS equivalence was requested, ignoring2025-07-09:16:01:12EDT * 0 * information * 0x5646ff456110_0x5646ff3bb0d0 * KIM_LogImplementation.cpp:119 * Log object destroyed.2025-07-09:16:01:12EDT * 0 * information * 0x5646ff456110 * KIM_LogImplementation.cpp:119 * Log object destroyed. output/kim-tools.log: ---------------------