# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 6.581419467926026*${_u_distance} variable latticeconst_converted equal 6.581419467926026*1 lattice diamond ${latticeconst_converted} lattice diamond 6.58141946792603 Lattice spacing in x,y,z = 6.5814195 6.5814195 6.5814195 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (65.814195 65.814195 65.814195) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0 0 0) to (65.814195 65.814195 65.814195) create_atoms CPU = 0.005 seconds variable mass_converted equal 118.71*${_u_mass} variable mass_converted equal 118.71*1 kim_interactions Sn WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Sn #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_KoKimKwon_2018_Sn__MO_129364204512_002 pair_coeff * * Sn #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 118.71 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 285074.72533011 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(1*1*${_u_distance}) variable V0_metal equal 285074.72533011/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 285074.72533011*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 285074.72533011 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 293.15*${_u_temperature} variable temp_converted equal 293.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 293.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 293.15 293.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "293.15 - 0.2" variable T_up equal "293.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_129364204512_002#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.307 | 4.307 | 4.307 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -24774.402 -24774.402 -25077.505 -25077.505 293.15 293.15 285074.73 285074.73 1135.664 1135.664 1000 -24447.576 -24447.576 -24773.503 -24773.503 315.22397 315.22397 287747.45 287747.45 -576.57916 -576.57916 Loop time of 147.137 on 1 procs for 1000 steps with 8000 atoms Performance: 0.587 ns/day, 40.871 hours/ns, 6.796 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 145.22 | 145.22 | 145.22 | 0.0 | 98.70 Neigh | 0 | 0 | 0 | 0.0 | 0.00 Comm | 0.23296 | 0.23296 | 0.23296 | 0.0 | 0.16 Output | 0.00029023 | 0.00029023 | 0.00029023 | 0.0 | 0.00 Modify | 1.5112 | 1.5112 | 1.5112 | 0.0 | 1.03 Other | | 0.1732 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 272000 ave 272000 max 272000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 272000 Ave neighs/atom = 34 Neighbor list builds = 0 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -24447.576 -24447.576 -24773.503 -24773.503 315.22397 315.22397 287747.45 287747.45 -576.57916 -576.57916 2000 -24460.13 -24460.13 -24752.9 -24752.9 283.15588 283.15588 287497.74 287497.74 363.00711 363.00711 Loop time of 149.607 on 1 procs for 1000 steps with 8000 atoms Performance: 0.578 ns/day, 41.558 hours/ns, 6.684 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 147.5 | 147.5 | 147.5 | 0.0 | 98.59 Neigh | 0.19327 | 0.19327 | 0.19327 | 0.0 | 0.13 Comm | 0.23793 | 0.23793 | 0.23793 | 0.0 | 0.16 Output | 0.00037206 | 0.00037206 | 0.00037206 | 0.0 | 0.00 Modify | 1.5054 | 1.5054 | 1.5054 | 0.0 | 1.01 Other | | 0.1724 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6715 ave 6715 max 6715 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282624 ave 282624 max 282624 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282624 Ave neighs/atom = 35.328 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -24460.13 -24460.13 -24752.9 -24752.9 283.15588 283.15588 287497.74 287497.74 363.00711 363.00711 3000 -24449.882 -24449.882 -24760.597 -24760.597 300.51231 300.51231 287547.36 287547.36 48.411009 48.411009 Loop time of 137.175 on 1 procs for 1000 steps with 8000 atoms Performance: 0.630 ns/day, 38.104 hours/ns, 7.290 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 135.3 | 135.3 | 135.3 | 0.0 | 98.63 Neigh | 0.18259 | 0.18259 | 0.18259 | 0.0 | 0.13 Comm | 0.22582 | 0.22582 | 0.22582 | 0.0 | 0.16 Output | 0.00033049 | 0.00033049 | 0.00033049 | 0.0 | 0.00 Modify | 1.3097 | 1.3097 | 1.3097 | 0.0 | 0.95 Other | | 0.1567 | | | 0.11 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6724 ave 6724 max 6724 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282822 ave 282822 max 282822 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282822 Ave neighs/atom = 35.35275 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -24449.882 -24449.882 -24760.597 -24760.597 300.51231 300.51231 287547.36 287547.36 48.411009 48.411009 4000 -24442.611 -24442.611 -24765.415 -24765.415 312.20447 312.20447 287897.4 287897.4 109.68177 109.68177 Loop time of 136.608 on 1 procs for 1000 steps with 8000 atoms Performance: 0.632 ns/day, 37.947 hours/ns, 7.320 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.74 | 134.74 | 134.74 | 0.0 | 98.63 Neigh | 0.18229 | 0.18229 | 0.18229 | 0.0 | 0.13 Comm | 0.22447 | 0.22447 | 0.22447 | 0.0 | 0.16 Output | 0.00033175 | 0.00033175 | 0.00033175 | 0.0 | 0.00 Modify | 1.3057 | 1.3057 | 1.3057 | 0.0 | 0.96 Other | | 0.1557 | | | 0.11 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6722 ave 6722 max 6722 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281910 ave 281910 max 281910 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281910 Ave neighs/atom = 35.23875 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -24442.611 -24442.611 -24765.415 -24765.415 312.20447 312.20447 287897.4 287897.4 109.68177 109.68177 5000 -24469.48 -24469.48 -24766.383 -24766.383 287.15401 287.15401 287666.33 287666.33 29.924772 29.924772 Loop time of 136.49 on 1 procs for 1000 steps with 8000 atoms Performance: 0.633 ns/day, 37.914 hours/ns, 7.327 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.62 | 134.62 | 134.62 | 0.0 | 98.63 Neigh | 0.18238 | 0.18238 | 0.18238 | 0.0 | 0.13 Comm | 0.22505 | 0.22505 | 0.22505 | 0.0 | 0.16 Output | 0.00024059 | 0.00024059 | 0.00024059 | 0.0 | 0.00 Modify | 1.3102 | 1.3102 | 1.3102 | 0.0 | 0.96 Other | | 0.1561 | | | 0.11 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6723 ave 6723 max 6723 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281752 ave 281752 max 281752 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281752 Ave neighs/atom = 35.219 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 287.32316339551, Press = 38.4483103955865 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -24469.48 -24469.48 -24766.383 -24766.383 287.15401 287.15401 287666.33 287666.33 29.924772 29.924772 6000 -24456.104 -24456.104 -24756.239 -24756.239 290.27939 290.27939 287705.26 287705.26 -103.13821 -103.13821 Loop time of 135.005 on 1 procs for 1000 steps with 8000 atoms Performance: 0.640 ns/day, 37.501 hours/ns, 7.407 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.14 | 133.14 | 133.14 | 0.0 | 98.62 Neigh | 0.18026 | 0.18026 | 0.18026 | 0.0 | 0.13 Comm | 0.21705 | 0.21705 | 0.21705 | 0.0 | 0.16 Output | 0.0002445 | 0.0002445 | 0.0002445 | 0.0 | 0.00 Modify | 1.3184 | 1.3184 | 1.3184 | 0.0 | 0.98 Other | | 0.1536 | | | 0.11 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6723 ave 6723 max 6723 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282648 ave 282648 max 282648 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282648 Ave neighs/atom = 35.331 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 291.816283604196, Press = 2.12614133617592 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -24456.104 -24456.104 -24756.239 -24756.239 290.27939 290.27939 287705.26 287705.26 -103.13821 -103.13821 7000 -24466.797 -24466.797 -24764.552 -24764.552 287.97757 287.97757 287429.46 287429.46 323.52728 323.52728 Loop time of 135.973 on 1 procs for 1000 steps with 8000 atoms Performance: 0.635 ns/day, 37.770 hours/ns, 7.354 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.08 | 134.08 | 134.08 | 0.0 | 98.61 Neigh | 0.18149 | 0.18149 | 0.18149 | 0.0 | 0.13 Comm | 0.22064 | 0.22064 | 0.22064 | 0.0 | 0.16 Output | 0.00024369 | 0.00024369 | 0.00024369 | 0.0 | 0.00 Modify | 1.3356 | 1.3356 | 1.3356 | 0.0 | 0.98 Other | | 0.1567 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6720 ave 6720 max 6720 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282410 ave 282410 max 282410 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282410 Ave neighs/atom = 35.30125 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.843506053429, Press = -0.470203930811608 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -24466.797 -24466.797 -24764.552 -24764.552 287.97757 287.97757 287429.46 287429.46 323.52728 323.52728 8000 -24463.174 -24463.174 -24767.65 -24767.65 294.47738 294.47738 287553.59 287553.59 233.16225 233.16225 Loop time of 136.137 on 1 procs for 1000 steps with 8000 atoms Performance: 0.635 ns/day, 37.816 hours/ns, 7.346 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.24 | 134.24 | 134.24 | 0.0 | 98.61 Neigh | 0.18161 | 0.18161 | 0.18161 | 0.0 | 0.13 Comm | 0.2219 | 0.2219 | 0.2219 | 0.0 | 0.16 Output | 0.00029643 | 0.00029643 | 0.00029643 | 0.0 | 0.00 Modify | 1.3353 | 1.3353 | 1.3353 | 0.0 | 0.98 Other | | 0.1549 | | | 0.11 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6723 ave 6723 max 6723 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281338 ave 281338 max 281338 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281338 Ave neighs/atom = 35.16725 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.086597808339, Press = 1.89354039972967 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -24463.174 -24463.174 -24767.65 -24767.65 294.47738 294.47738 287553.59 287553.59 233.16225 233.16225 9000 -24456.149 -24456.149 -24759.303 -24759.303 293.20002 293.20002 287463.52 287463.52 286.64747 286.64747 Loop time of 135.927 on 1 procs for 1000 steps with 8000 atoms Performance: 0.636 ns/day, 37.757 hours/ns, 7.357 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.1 | 134.1 | 134.1 | 0.0 | 98.66 Neigh | 0.12087 | 0.12087 | 0.12087 | 0.0 | 0.09 Comm | 0.21892 | 0.21892 | 0.21892 | 0.0 | 0.16 Output | 0.00024544 | 0.00024544 | 0.00024544 | 0.0 | 0.00 Modify | 1.3331 | 1.3331 | 1.3331 | 0.0 | 0.98 Other | | 0.1549 | | | 0.11 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6717 ave 6717 max 6717 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281262 ave 281262 max 281262 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281262 Ave neighs/atom = 35.15775 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.895842978151, Press = 3.15291813112359 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -24456.149 -24456.149 -24759.303 -24759.303 293.20002 293.20002 287463.52 287463.52 286.64747 286.64747 10000 -24465.174 -24465.174 -24764.982 -24764.982 289.963 289.963 287609.39 287609.39 -42.844784 -42.844784 Loop time of 136.219 on 1 procs for 1000 steps with 8000 atoms Performance: 0.634 ns/day, 37.839 hours/ns, 7.341 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.32 | 134.32 | 134.32 | 0.0 | 98.61 Neigh | 0.18153 | 0.18153 | 0.18153 | 0.0 | 0.13 Comm | 0.22193 | 0.22193 | 0.22193 | 0.0 | 0.16 Output | 0.00024977 | 0.00024977 | 0.00024977 | 0.0 | 0.00 Modify | 1.3353 | 1.3353 | 1.3353 | 0.0 | 0.98 Other | | 0.1551 | | | 0.11 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6720 ave 6720 max 6720 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281770 ave 281770 max 281770 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281770 Ave neighs/atom = 35.22125 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.099930100728, Press = 1.06289893265314 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -24465.174 -24465.174 -24764.982 -24764.982 289.963 289.963 287609.39 287609.39 -42.844784 -42.844784 11000 -24464.99 -24464.99 -24771.348 -24771.348 296.29764 296.29764 287786.34 287786.34 -87.45723 -87.45723 Loop time of 136.266 on 1 procs for 1000 steps with 8000 atoms Performance: 0.634 ns/day, 37.852 hours/ns, 7.339 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.37 | 134.37 | 134.37 | 0.0 | 98.61 Neigh | 0.18144 | 0.18144 | 0.18144 | 0.0 | 0.13 Comm | 0.22098 | 0.22098 | 0.22098 | 0.0 | 0.16 Output | 0.00025069 | 0.00025069 | 0.00025069 | 0.0 | 0.00 Modify | 1.3343 | 1.3343 | 1.3343 | 0.0 | 0.98 Other | | 0.1551 | | | 0.11 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6723 ave 6723 max 6723 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282322 ave 282322 max 282322 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282322 Ave neighs/atom = 35.29025 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.151299953244, Press = 0.444239151400441 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -24464.99 -24464.99 -24771.348 -24771.348 296.29764 296.29764 287786.34 287786.34 -87.45723 -87.45723 12000 -24462.677 -24462.677 -24768.832 -24768.832 296.10149 296.10149 287703.02 287703.02 18.159052 18.159052 Loop time of 136.162 on 1 procs for 1000 steps with 8000 atoms Performance: 0.635 ns/day, 37.823 hours/ns, 7.344 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.27 | 134.27 | 134.27 | 0.0 | 98.61 Neigh | 0.18128 | 0.18128 | 0.18128 | 0.0 | 0.13 Comm | 0.22244 | 0.22244 | 0.22244 | 0.0 | 0.16 Output | 0.00025479 | 0.00025479 | 0.00025479 | 0.0 | 0.00 Modify | 1.3357 | 1.3357 | 1.3357 | 0.0 | 0.98 Other | | 0.1554 | | | 0.11 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6722 ave 6722 max 6722 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281698 ave 281698 max 281698 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281698 Ave neighs/atom = 35.21225 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.027916838132, Press = 0.500987817264493 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -24462.677 -24462.677 -24768.832 -24768.832 296.10149 296.10149 287703.02 287703.02 18.159052 18.159052 13000 -24464.234 -24464.234 -24766.42 -24766.42 292.263 292.263 287663.94 287663.94 0.60986039 0.60986039 Loop time of 137.407 on 1 procs for 1000 steps with 8000 atoms Performance: 0.629 ns/day, 38.169 hours/ns, 7.278 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 135.5 | 135.5 | 135.5 | 0.0 | 98.61 Neigh | 0.1829 | 0.1829 | 0.1829 | 0.0 | 0.13 Comm | 0.22365 | 0.22365 | 0.22365 | 0.0 | 0.16 Output | 0.00024434 | 0.00024434 | 0.00024434 | 0.0 | 0.00 Modify | 1.345 | 1.345 | 1.345 | 0.0 | 0.98 Other | | 0.157 | | | 0.11 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281908 ave 281908 max 281908 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281908 Ave neighs/atom = 35.2385 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.974660080448, Press = 0.7418567582817 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -24464.234 -24464.234 -24766.42 -24766.42 292.263 292.263 287663.94 287663.94 0.60986039 0.60986039 14000 -24457.24 -24457.24 -24764.6 -24764.6 297.26725 297.26725 287955.67 287955.67 -391.14227 -391.14227 Loop time of 142.492 on 1 procs for 1000 steps with 8000 atoms Performance: 0.606 ns/day, 39.581 hours/ns, 7.018 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 140.48 | 140.48 | 140.48 | 0.0 | 98.59 Neigh | 0.18628 | 0.18628 | 0.18628 | 0.0 | 0.13 Comm | 0.2305 | 0.2305 | 0.2305 | 0.0 | 0.16 Output | 0.00065989 | 0.00065989 | 0.00065989 | 0.0 | 0.00 Modify | 1.4321 | 1.4321 | 1.4321 | 0.0 | 1.01 Other | | 0.1633 | | | 0.11 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282324 ave 282324 max 282324 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282324 Ave neighs/atom = 35.2905 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.906842241343, Press = 0.922034956760835 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -24457.24 -24457.24 -24764.6 -24764.6 297.26725 297.26725 287955.67 287955.67 -391.14227 -391.14227 15000 -24465.712 -24465.712 -24765.475 -24765.475 289.92008 289.92008 287966.45 287966.45 -325.55497 -325.55497 Loop time of 151.342 on 1 procs for 1000 steps with 8000 atoms Performance: 0.571 ns/day, 42.039 hours/ns, 6.608 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 149.15 | 149.15 | 149.15 | 0.0 | 98.55 Neigh | 0.19404 | 0.19404 | 0.19404 | 0.0 | 0.13 Comm | 0.24389 | 0.24389 | 0.24389 | 0.0 | 0.16 Output | 0.00034144 | 0.00034144 | 0.00034144 | 0.0 | 0.00 Modify | 1.5811 | 1.5811 | 1.5811 | 0.0 | 1.04 Other | | 0.1751 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6724 ave 6724 max 6724 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282008 ave 282008 max 282008 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282008 Ave neighs/atom = 35.251 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.895979321559, Press = 0.177190674582409 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -24465.712 -24465.712 -24765.475 -24765.475 289.92008 289.92008 287966.45 287966.45 -325.55497 -325.55497 16000 -24455.552 -24455.552 -24763.948 -24763.948 298.26934 298.26934 288039.87 288039.87 -373.45902 -373.45902 Loop time of 157.179 on 1 procs for 1000 steps with 8000 atoms Performance: 0.550 ns/day, 43.661 hours/ns, 6.362 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 154.88 | 154.88 | 154.88 | 0.0 | 98.54 Neigh | 0.19766 | 0.19766 | 0.19766 | 0.0 | 0.13 Comm | 0.2527 | 0.2527 | 0.2527 | 0.0 | 0.16 Output | 0.00025468 | 0.00025468 | 0.00025468 | 0.0 | 0.00 Modify | 1.6646 | 1.6646 | 1.6646 | 0.0 | 1.06 Other | | 0.1816 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6721 ave 6721 max 6721 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281652 ave 281652 max 281652 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281652 Ave neighs/atom = 35.2065 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.882489112544, Press = -0.124706854254861 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -24455.552 -24455.552 -24763.948 -24763.948 298.26934 298.26934 288039.87 288039.87 -373.45902 -373.45902 17000 -24455.449 -24455.449 -24765.805 -24765.805 300.16454 300.16454 287967.6 287967.6 -297.80175 -297.80175 Loop time of 140.526 on 1 procs for 1000 steps with 8000 atoms Performance: 0.615 ns/day, 39.035 hours/ns, 7.116 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 138.6 | 138.6 | 138.6 | 0.0 | 98.63 Neigh | 0.12158 | 0.12158 | 0.12158 | 0.0 | 0.09 Comm | 0.23164 | 0.23164 | 0.23164 | 0.0 | 0.16 Output | 0.0002513 | 0.0002513 | 0.0002513 | 0.0 | 0.00 Modify | 1.4093 | 1.4093 | 1.4093 | 0.0 | 1.00 Other | | 0.1626 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6716 ave 6716 max 6716 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281846 ave 281846 max 281846 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281846 Ave neighs/atom = 35.23075 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.828841448342, Press = -0.305325558218365 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -24455.449 -24455.449 -24765.805 -24765.805 300.16454 300.16454 287967.6 287967.6 -297.80175 -297.80175 18000 -24454.229 -24454.229 -24762.676 -24762.676 298.31904 298.31904 287728.82 287728.82 22.689471 22.689471 Loop time of 136.704 on 1 procs for 1000 steps with 8000 atoms Performance: 0.632 ns/day, 37.973 hours/ns, 7.315 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.84 | 134.84 | 134.84 | 0.0 | 98.64 Neigh | 0.12163 | 0.12163 | 0.12163 | 0.0 | 0.09 Comm | 0.22598 | 0.22598 | 0.22598 | 0.0 | 0.17 Output | 0.00024958 | 0.00024958 | 0.00024958 | 0.0 | 0.00 Modify | 1.3557 | 1.3557 | 1.3557 | 0.0 | 0.99 Other | | 0.1583 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6722 ave 6722 max 6722 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281946 ave 281946 max 281946 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281946 Ave neighs/atom = 35.24325 Neighbor list builds = 2 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.847244426964, Press = -0.458963278202019 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -24454.229 -24454.229 -24762.676 -24762.676 298.31904 298.31904 287728.82 287728.82 22.689471 22.689471 19000 -24454.689 -24454.689 -24759.601 -24759.601 294.89986 294.89986 287552.39 287552.39 191.08973 191.08973 Loop time of 143.326 on 1 procs for 1000 steps with 8000 atoms Performance: 0.603 ns/day, 39.813 hours/ns, 6.977 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 141.27 | 141.27 | 141.27 | 0.0 | 98.57 Neigh | 0.18866 | 0.18866 | 0.18866 | 0.0 | 0.13 Comm | 0.23437 | 0.23437 | 0.23437 | 0.0 | 0.16 Output | 0.00037345 | 0.00037345 | 0.00037345 | 0.0 | 0.00 Modify | 1.4636 | 1.4636 | 1.4636 | 0.0 | 1.02 Other | | 0.166 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6722 ave 6722 max 6722 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282080 ave 282080 max 282080 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282080 Ave neighs/atom = 35.26 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 292.956793844812, Press = -0.521663026981733 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -24454.689 -24454.689 -24759.601 -24759.601 294.89986 294.89986 287552.39 287552.39 191.08973 191.08973 20000 -24465.585 -24465.585 -24768.626 -24768.626 293.08991 293.08991 287301.22 287301.22 517.54367 517.54367 Loop time of 156.271 on 1 procs for 1000 steps with 8000 atoms Performance: 0.553 ns/day, 43.409 hours/ns, 6.399 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 153.97 | 153.97 | 153.97 | 0.0 | 98.53 Neigh | 0.19648 | 0.19648 | 0.19648 | 0.0 | 0.13 Comm | 0.25228 | 0.25228 | 0.25228 | 0.0 | 0.16 Output | 0.00024663 | 0.00024663 | 0.00024663 | 0.0 | 0.00 Modify | 1.6691 | 1.6691 | 1.6691 | 0.0 | 1.07 Other | | 0.1818 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6722 ave 6722 max 6722 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281404 ave 281404 max 281404 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281404 Ave neighs/atom = 35.1755 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 293.030812090961, Press = -0.38853582956464 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -24465.585 -24465.585 -24768.626 -24768.626 293.08991 293.08991 287301.22 287301.22 517.54367 517.54367 21000 -24455.134 -24455.134 -24763.015 -24763.015 297.77087 297.77087 287718.52 287718.52 80.549953 80.549953 Loop time of 146.535 on 1 procs for 1000 steps with 8000 atoms Performance: 0.590 ns/day, 40.704 hours/ns, 6.824 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 144.44 | 144.44 | 144.44 | 0.0 | 98.57 Neigh | 0.18928 | 0.18928 | 0.18928 | 0.0 | 0.13 Comm | 0.23541 | 0.23541 | 0.23541 | 0.0 | 0.16 Output | 0.00024893 | 0.00024893 | 0.00024893 | 0.0 | 0.00 Modify | 1.5019 | 1.5019 | 1.5019 | 0.0 | 1.02 Other | | 0.1668 | | | 0.11 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281906 ave 281906 max 281906 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281906 Ave neighs/atom = 35.23825 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T293.15.out" else "print 'not_converged' file output/vol_T293.15.out" print '${V}' file output/vol_T293.15.out 287695.776937436 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0