# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 6.581419467926026*${_u_distance} variable latticeconst_converted equal 6.581419467926026*1 lattice diamond ${latticeconst_converted} lattice diamond 6.58141946792603 Lattice spacing in x,y,z = 6.5814195 6.5814195 6.5814195 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (65.814195 65.814195 65.814195) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0 0 0) to (65.814195 65.814195 65.814195) create_atoms CPU = 0.005 seconds variable mass_converted equal 118.71*${_u_mass} variable mass_converted equal 118.71*1 kim_interactions Sn WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Sn #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_KoKimKwon_2018_Sn__MO_129364204512_002 pair_coeff * * Sn #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 118.71 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 285074.72533011 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(1*1*${_u_distance}) variable V0_metal equal 285074.72533011/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 285074.72533011*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 285074.72533011 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 313.15*${_u_temperature} variable temp_converted equal 313.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 313.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 313.15 313.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "313.15 - 0.2" variable T_up equal "313.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_129364204512_002#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.307 | 4.307 | 4.307 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -24753.723 -24753.723 -25077.505 -25077.505 313.15 313.15 285074.73 285074.73 1213.1442 1213.1442 1000 -24403.764 -24403.764 -24748.945 -24748.945 333.84631 333.84631 287931.58 287931.58 -536.44651 -536.44651 Loop time of 134.183 on 1 procs for 1000 steps with 8000 atoms Performance: 0.644 ns/day, 37.273 hours/ns, 7.453 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 132.44 | 132.44 | 132.44 | 0.0 | 98.70 Neigh | 0.06004 | 0.06004 | 0.06004 | 0.0 | 0.04 Comm | 0.20082 | 0.20082 | 0.20082 | 0.0 | 0.15 Output | 0.0002974 | 0.0002974 | 0.0002974 | 0.0 | 0.00 Modify | 1.3219 | 1.3219 | 1.3219 | 0.0 | 0.99 Other | | 0.1605 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6721 ave 6721 max 6721 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281784 ave 281784 max 281784 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281784 Ave neighs/atom = 35.223 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -24403.764 -24403.764 -24748.945 -24748.945 333.84631 333.84631 287931.58 287931.58 -536.44651 -536.44651 2000 -24417.139 -24417.139 -24729.453 -24729.453 302.05781 302.05781 287734.55 287734.55 286.71923 286.71923 Loop time of 134.782 on 1 procs for 1000 steps with 8000 atoms Performance: 0.641 ns/day, 37.439 hours/ns, 7.419 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 132.95 | 132.95 | 132.95 | 0.0 | 98.64 Neigh | 0.18073 | 0.18073 | 0.18073 | 0.0 | 0.13 Comm | 0.20408 | 0.20408 | 0.20408 | 0.0 | 0.15 Output | 0.00034355 | 0.00034355 | 0.00034355 | 0.0 | 0.00 Modify | 1.287 | 1.287 | 1.287 | 0.0 | 0.95 Other | | 0.1584 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6718 ave 6718 max 6718 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282510 ave 282510 max 282510 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282510 Ave neighs/atom = 35.31375 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -24417.139 -24417.139 -24729.453 -24729.453 302.05781 302.05781 287734.55 287734.55 286.71923 286.71923 3000 -24407.269 -24407.269 -24738.728 -24738.728 320.57531 320.57531 287836.47 287836.47 -128.59848 -128.59848 Loop time of 135.252 on 1 procs for 1000 steps with 8000 atoms Performance: 0.639 ns/day, 37.570 hours/ns, 7.394 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.42 | 133.42 | 133.42 | 0.0 | 98.64 Neigh | 0.18096 | 0.18096 | 0.18096 | 0.0 | 0.13 Comm | 0.20412 | 0.20412 | 0.20412 | 0.0 | 0.15 Output | 0.00028045 | 0.00028045 | 0.00028045 | 0.0 | 0.00 Modify | 1.2926 | 1.2926 | 1.2926 | 0.0 | 0.96 Other | | 0.1583 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6721 ave 6721 max 6721 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282886 ave 282886 max 282886 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282886 Ave neighs/atom = 35.36075 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -24407.269 -24407.269 -24738.728 -24738.728 320.57531 320.57531 287836.47 287836.47 -128.59848 -128.59848 4000 -24397.664 -24397.664 -24741.728 -24741.728 332.76538 332.76538 288200.48 288200.48 -20.513056 -20.513056 Loop time of 135.12 on 1 procs for 1000 steps with 8000 atoms Performance: 0.639 ns/day, 37.533 hours/ns, 7.401 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.29 | 133.29 | 133.29 | 0.0 | 98.64 Neigh | 0.18109 | 0.18109 | 0.18109 | 0.0 | 0.13 Comm | 0.20449 | 0.20449 | 0.20449 | 0.0 | 0.15 Output | 0.00028458 | 0.00028458 | 0.00028458 | 0.0 | 0.00 Modify | 1.2912 | 1.2912 | 1.2912 | 0.0 | 0.96 Other | | 0.1582 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6715 ave 6715 max 6715 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283750 ave 283750 max 283750 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283750 Ave neighs/atom = 35.46875 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -24397.664 -24397.664 -24741.728 -24741.728 332.76538 332.76538 288200.48 288200.48 -20.513056 -20.513056 5000 -24427.189 -24427.189 -24741.705 -24741.705 304.18798 304.18798 287899.06 287899.06 -25.520183 -25.520183 Loop time of 145.59 on 1 procs for 1000 steps with 8000 atoms Performance: 0.593 ns/day, 40.442 hours/ns, 6.869 timesteps/s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 143.55 | 143.55 | 143.55 | 0.0 | 98.60 Neigh | 0.18795 | 0.18795 | 0.18795 | 0.0 | 0.13 Comm | 0.22055 | 0.22055 | 0.22055 | 0.0 | 0.15 Output | 0.00035043 | 0.00035043 | 0.00035043 | 0.0 | 0.00 Modify | 1.4622 | 1.4622 | 1.4622 | 0.0 | 1.00 Other | | 0.1702 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6718 ave 6718 max 6718 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282286 ave 282286 max 282286 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282286 Ave neighs/atom = 35.28575 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 307.487665256515, Press = 1.47178985230638 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -24427.189 -24427.189 -24741.705 -24741.705 304.18798 304.18798 287899.06 287899.06 -25.520183 -25.520183 6000 -24415.464 -24415.464 -24733.461 -24733.461 307.55508 307.55508 287870.83 287870.83 -101.79716 -101.79716 Loop time of 156.963 on 1 procs for 1000 steps with 8000 atoms Performance: 0.550 ns/day, 43.601 hours/ns, 6.371 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 154.66 | 154.66 | 154.66 | 0.0 | 98.54 Neigh | 0.20068 | 0.20068 | 0.20068 | 0.0 | 0.13 Comm | 0.2388 | 0.2388 | 0.2388 | 0.0 | 0.15 Output | 0.00025899 | 0.00025899 | 0.00025899 | 0.0 | 0.00 Modify | 1.6749 | 1.6749 | 1.6749 | 0.0 | 1.07 Other | | 0.1832 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6724 ave 6724 max 6724 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283078 ave 283078 max 283078 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283078 Ave neighs/atom = 35.38475 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 311.75790714509, Press = 4.00156099288376 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -24415.464 -24415.464 -24733.461 -24733.461 307.55508 307.55508 287870.83 287870.83 -101.79716 -101.79716 7000 -24423.679 -24423.679 -24741.205 -24741.205 307.09935 307.09935 287788.73 287788.73 129.80028 129.80028 Loop time of 156.967 on 1 procs for 1000 steps with 8000 atoms Performance: 0.550 ns/day, 43.602 hours/ns, 6.371 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 154.67 | 154.67 | 154.67 | 0.0 | 98.54 Neigh | 0.19752 | 0.19752 | 0.19752 | 0.0 | 0.13 Comm | 0.23963 | 0.23963 | 0.23963 | 0.0 | 0.15 Output | 0.000256 | 0.000256 | 0.000256 | 0.0 | 0.00 Modify | 1.676 | 1.676 | 1.676 | 0.0 | 1.07 Other | | 0.1838 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6707 ave 6707 max 6707 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282258 ave 282258 max 282258 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282258 Ave neighs/atom = 35.28225 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.864404463685, Press = -2.24301342005875 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -24423.679 -24423.679 -24741.205 -24741.205 307.09935 307.09935 287788.73 287788.73 129.80028 129.80028 8000 -24419.488 -24419.488 -24746.517 -24746.517 316.29047 316.29047 287884.12 287884.12 53.12516 53.12516 Loop time of 156.966 on 1 procs for 1000 steps with 8000 atoms Performance: 0.550 ns/day, 43.602 hours/ns, 6.371 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 154.68 | 154.68 | 154.68 | 0.0 | 98.54 Neigh | 0.19899 | 0.19899 | 0.19899 | 0.0 | 0.13 Comm | 0.23638 | 0.23638 | 0.23638 | 0.0 | 0.15 Output | 0.00026466 | 0.00026466 | 0.00026466 | 0.0 | 0.00 Modify | 1.6674 | 1.6674 | 1.6674 | 0.0 | 1.06 Other | | 0.1839 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6721 ave 6721 max 6721 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281636 ave 281636 max 281636 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281636 Ave neighs/atom = 35.2045 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.062070721347, Press = -1.3000459108272 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -24419.488 -24419.488 -24746.517 -24746.517 316.29047 316.29047 287884.12 287884.12 53.12516 53.12516 9000 -24415.342 -24415.342 -24738.619 -24738.619 312.66183 312.66183 287705.98 287705.98 181.7806 181.7806 Loop time of 156.938 on 1 procs for 1000 steps with 8000 atoms Performance: 0.551 ns/day, 43.594 hours/ns, 6.372 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 154.65 | 154.65 | 154.65 | 0.0 | 98.54 Neigh | 0.19695 | 0.19695 | 0.19695 | 0.0 | 0.13 Comm | 0.23809 | 0.23809 | 0.23809 | 0.0 | 0.15 Output | 0.00025714 | 0.00025714 | 0.00025714 | 0.0 | 0.00 Modify | 1.6715 | 1.6715 | 1.6715 | 0.0 | 1.07 Other | | 0.1831 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6718 ave 6718 max 6718 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282508 ave 282508 max 282508 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282508 Ave neighs/atom = 35.3135 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.862576822531, Press = -2.9424990614767 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -24415.342 -24415.342 -24738.619 -24738.619 312.66183 312.66183 287705.98 287705.98 181.7806 181.7806 10000 -24420.903 -24420.903 -24739.419 -24739.419 308.05692 308.05692 287950.31 287950.31 -147.46152 -147.46152 Loop time of 156.871 on 1 procs for 1000 steps with 8000 atoms Performance: 0.551 ns/day, 43.575 hours/ns, 6.375 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 154.59 | 154.59 | 154.59 | 0.0 | 98.54 Neigh | 0.20035 | 0.20035 | 0.20035 | 0.0 | 0.13 Comm | 0.23655 | 0.23655 | 0.23655 | 0.0 | 0.15 Output | 0.00025635 | 0.00025635 | 0.00025635 | 0.0 | 0.00 Modify | 1.6648 | 1.6648 | 1.6648 | 0.0 | 1.06 Other | | 0.1816 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6717 ave 6717 max 6717 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282568 ave 282568 max 282568 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282568 Ave neighs/atom = 35.321 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.106792255935, Press = -4.56995928798121 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -24420.903 -24420.903 -24739.419 -24739.419 308.05692 308.05692 287950.31 287950.31 -147.46152 -147.46152 11000 -24420.199 -24420.199 -24747.981 -24747.981 317.01864 317.01864 288073.39 288073.39 -273.70378 -273.70378 Loop time of 156.916 on 1 procs for 1000 steps with 8000 atoms Performance: 0.551 ns/day, 43.588 hours/ns, 6.373 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 154.62 | 154.62 | 154.62 | 0.0 | 98.53 Neigh | 0.1994 | 0.1994 | 0.1994 | 0.0 | 0.13 Comm | 0.23894 | 0.23894 | 0.23894 | 0.0 | 0.15 Output | 0.00026186 | 0.00026186 | 0.00026186 | 0.0 | 0.00 Modify | 1.6774 | 1.6774 | 1.6774 | 0.0 | 1.07 Other | | 0.1845 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6722 ave 6722 max 6722 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282406 ave 282406 max 282406 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282406 Ave neighs/atom = 35.30075 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.125911351649, Press = -1.12816774878594 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -24420.199 -24420.199 -24747.981 -24747.981 317.01864 317.01864 288073.39 288073.39 -273.70378 -273.70378 12000 -24416.536 -24416.536 -24748.944 -24748.944 321.49245 321.49245 288047.72 288047.72 -175.63597 -175.63597 Loop time of 153.123 on 1 procs for 1000 steps with 8000 atoms Performance: 0.564 ns/day, 42.534 hours/ns, 6.531 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 150.9 | 150.9 | 150.9 | 0.0 | 98.55 Neigh | 0.19248 | 0.19248 | 0.19248 | 0.0 | 0.13 Comm | 0.23406 | 0.23406 | 0.23406 | 0.0 | 0.15 Output | 0.00036824 | 0.00036824 | 0.00036824 | 0.0 | 0.00 Modify | 1.6122 | 1.6122 | 1.6122 | 0.0 | 1.05 Other | | 0.1796 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6722 ave 6722 max 6722 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282282 ave 282282 max 282282 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282282 Ave neighs/atom = 35.28525 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.991987684465, Press = -0.472651633325995 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -24416.536 -24416.536 -24748.944 -24748.944 321.49245 321.49245 288047.72 288047.72 -175.63597 -175.63597 13000 -24420.377 -24420.377 -24748.027 -24748.027 316.89101 316.89101 287938.68 287938.68 -145.10318 -145.10318 Loop time of 156.057 on 1 procs for 1000 steps with 8000 atoms Performance: 0.554 ns/day, 43.349 hours/ns, 6.408 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 153.79 | 153.79 | 153.79 | 0.0 | 98.54 Neigh | 0.19767 | 0.19767 | 0.19767 | 0.0 | 0.13 Comm | 0.23598 | 0.23598 | 0.23598 | 0.0 | 0.15 Output | 0.00035354 | 0.00035354 | 0.00035354 | 0.0 | 0.00 Modify | 1.6575 | 1.6575 | 1.6575 | 0.0 | 1.06 Other | | 0.1807 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6724 ave 6724 max 6724 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282162 ave 282162 max 282162 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282162 Ave neighs/atom = 35.27025 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.937834342786, Press = -0.504921933604152 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -24420.377 -24420.377 -24748.027 -24748.027 316.89101 316.89101 287938.68 287938.68 -145.10318 -145.10318 14000 -24412.194 -24412.194 -24742.007 -24742.007 318.9827 318.9827 287971.71 287971.71 -132.82141 -132.82141 Loop time of 153.7 on 1 procs for 1000 steps with 8000 atoms Performance: 0.562 ns/day, 42.695 hours/ns, 6.506 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 151.45 | 151.45 | 151.45 | 0.0 | 98.53 Neigh | 0.19871 | 0.19871 | 0.19871 | 0.0 | 0.13 Comm | 0.23421 | 0.23421 | 0.23421 | 0.0 | 0.15 Output | 0.00052409 | 0.00052409 | 0.00052409 | 0.0 | 0.00 Modify | 1.6407 | 1.6407 | 1.6407 | 0.0 | 1.07 Other | | 0.1799 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6716 ave 6716 max 6716 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282422 ave 282422 max 282422 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282422 Ave neighs/atom = 35.30275 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.885792842635, Press = 0.0953706488139609 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -24412.194 -24412.194 -24742.007 -24742.007 318.9827 318.9827 287971.71 287971.71 -132.82141 -132.82141 15000 -24426.212 -24426.212 -24744.127 -24744.127 307.47548 307.47548 288025.18 288025.18 -231.94304 -231.94304 Loop time of 154.379 on 1 procs for 1000 steps with 8000 atoms Performance: 0.560 ns/day, 42.883 hours/ns, 6.478 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 152.13 | 152.13 | 152.13 | 0.0 | 98.54 Neigh | 0.19643 | 0.19643 | 0.19643 | 0.0 | 0.13 Comm | 0.23716 | 0.23716 | 0.23716 | 0.0 | 0.15 Output | 0.00035449 | 0.00035449 | 0.00035449 | 0.0 | 0.00 Modify | 1.6343 | 1.6343 | 1.6343 | 0.0 | 1.06 Other | | 0.1805 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6724 ave 6724 max 6724 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282186 ave 282186 max 282186 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282186 Ave neighs/atom = 35.27325 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.897044946493, Press = -0.0151815254310773 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -24426.212 -24426.212 -24744.127 -24744.127 307.47548 307.47548 288025.18 288025.18 -231.94304 -231.94304 16000 -24413.081 -24413.081 -24738.482 -24738.482 314.71544 314.71544 288208.24 288208.24 -416.26731 -416.26731 Loop time of 154.042 on 1 procs for 1000 steps with 8000 atoms Performance: 0.561 ns/day, 42.789 hours/ns, 6.492 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 151.78 | 151.78 | 151.78 | 0.0 | 98.53 Neigh | 0.19199 | 0.19199 | 0.19199 | 0.0 | 0.12 Comm | 0.23837 | 0.23837 | 0.23837 | 0.0 | 0.15 Output | 0.00034963 | 0.00034963 | 0.00034963 | 0.0 | 0.00 Modify | 1.6468 | 1.6468 | 1.6468 | 0.0 | 1.07 Other | | 0.1798 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6713 ave 6713 max 6713 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282414 ave 282414 max 282414 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282414 Ave neighs/atom = 35.30175 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.870992674506, Press = 0.424531999993274 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -24413.081 -24413.081 -24738.482 -24738.482 314.71544 314.71544 288208.24 288208.24 -416.26731 -416.26731 17000 -24411.614 -24411.614 -24741.061 -24741.061 318.62864 318.62864 288125.19 288125.19 -325.24351 -325.24351 Loop time of 156.901 on 1 procs for 1000 steps with 8000 atoms Performance: 0.551 ns/day, 43.584 hours/ns, 6.373 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 154.6 | 154.6 | 154.6 | 0.0 | 98.53 Neigh | 0.1962 | 0.1962 | 0.1962 | 0.0 | 0.13 Comm | 0.24277 | 0.24277 | 0.24277 | 0.0 | 0.15 Output | 0.00034745 | 0.00034745 | 0.00034745 | 0.0 | 0.00 Modify | 1.6803 | 1.6803 | 1.6803 | 0.0 | 1.07 Other | | 0.1843 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6717 ave 6717 max 6717 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283140 ave 283140 max 283140 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283140 Ave neighs/atom = 35.3925 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.809220555696, Press = 0.970576151564858 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -24411.614 -24411.614 -24741.061 -24741.061 318.62864 318.62864 288125.19 288125.19 -325.24351 -325.24351 18000 -24411.956 -24411.956 -24736.887 -24736.887 314.26135 314.26135 287968.62 287968.62 -116.53513 -116.53513 Loop time of 146.513 on 1 procs for 1000 steps with 8000 atoms Performance: 0.590 ns/day, 40.698 hours/ns, 6.825 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 144.42 | 144.42 | 144.42 | 0.0 | 98.57 Neigh | 0.18699 | 0.18699 | 0.18699 | 0.0 | 0.13 Comm | 0.22444 | 0.22444 | 0.22444 | 0.0 | 0.15 Output | 0.00024758 | 0.00024758 | 0.00024758 | 0.0 | 0.00 Modify | 1.5147 | 1.5147 | 1.5147 | 0.0 | 1.03 Other | | 0.1705 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6717 ave 6717 max 6717 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282804 ave 282804 max 282804 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282804 Ave neighs/atom = 35.3505 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.853162226646, Press = 0.583485410154197 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -24411.956 -24411.956 -24736.887 -24736.887 314.26135 314.26135 287968.62 287968.62 -116.53513 -116.53513 19000 -24415.741 -24415.741 -24737.905 -24737.905 311.58491 311.58491 287895.72 287895.72 -36.498813 -36.498813 Loop time of 157.222 on 1 procs for 1000 steps with 8000 atoms Performance: 0.550 ns/day, 43.673 hours/ns, 6.360 timesteps/s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 154.92 | 154.92 | 154.92 | 0.0 | 98.54 Neigh | 0.20014 | 0.20014 | 0.20014 | 0.0 | 0.13 Comm | 0.24061 | 0.24061 | 0.24061 | 0.0 | 0.15 Output | 0.00024879 | 0.00024879 | 0.00024879 | 0.0 | 0.00 Modify | 1.6771 | 1.6771 | 1.6771 | 0.0 | 1.07 Other | | 0.1834 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6718 ave 6718 max 6718 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282230 ave 282230 max 282230 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282230 Ave neighs/atom = 35.27875 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 312.968427365774, Press = 1.16984086145205 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -24415.741 -24415.741 -24737.905 -24737.905 311.58491 311.58491 287895.72 287895.72 -36.498813 -36.498813 20000 -24423.969 -24423.969 -24745.526 -24745.526 310.9982 310.9982 287823.99 287823.99 67.510912 67.510912 Loop time of 151.961 on 1 procs for 1000 steps with 8000 atoms Performance: 0.569 ns/day, 42.211 hours/ns, 6.581 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 149.74 | 149.74 | 149.74 | 0.0 | 98.54 Neigh | 0.19655 | 0.19655 | 0.19655 | 0.0 | 0.13 Comm | 0.2374 | 0.2374 | 0.2374 | 0.0 | 0.16 Output | 0.00025384 | 0.00025384 | 0.00025384 | 0.0 | 0.00 Modify | 1.6112 | 1.6112 | 1.6112 | 0.0 | 1.06 Other | | 0.1783 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6724 ave 6724 max 6724 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 281714 ave 281714 max 281714 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 281714 Ave neighs/atom = 35.21425 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.056930017483, Press = 1.14962588336065 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -24423.969 -24423.969 -24745.526 -24745.526 310.9982 310.9982 287823.99 287823.99 67.510912 67.510912 21000 -24409.884 -24409.884 -24742.533 -24742.533 321.72586 321.72586 287857.95 287857.95 101.81646 101.81646 Loop time of 136.132 on 1 procs for 1000 steps with 8000 atoms Performance: 0.635 ns/day, 37.815 hours/ns, 7.346 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.22 | 134.22 | 134.22 | 0.0 | 98.60 Neigh | 0.18178 | 0.18178 | 0.18178 | 0.0 | 0.13 Comm | 0.21532 | 0.21532 | 0.21532 | 0.0 | 0.16 Output | 0.00025034 | 0.00025034 | 0.00025034 | 0.0 | 0.00 Modify | 1.356 | 1.356 | 1.356 | 0.0 | 1.00 Other | | 0.1574 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6716 ave 6716 max 6716 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282348 ave 282348 max 282348 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282348 Ave neighs/atom = 35.2935 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 313.059954866074, Press = 0.872367788443851 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 21000 -24409.884 -24409.884 -24742.533 -24742.533 321.72586 321.72586 287857.95 287857.95 101.81646 101.81646 22000 -24423.391 -24423.391 -24747.147 -24747.147 313.12554 313.12554 287868.23 287868.23 38.599742 38.599742 Loop time of 135.918 on 1 procs for 1000 steps with 8000 atoms Performance: 0.636 ns/day, 37.755 hours/ns, 7.357 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.02 | 134.02 | 134.02 | 0.0 | 98.60 Neigh | 0.1816 | 0.1816 | 0.1816 | 0.0 | 0.13 Comm | 0.21304 | 0.21304 | 0.21304 | 0.0 | 0.16 Output | 0.00025584 | 0.00025584 | 0.00025584 | 0.0 | 0.00 Modify | 1.3472 | 1.3472 | 1.3472 | 0.0 | 0.99 Other | | 0.1562 | | | 0.11 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282226 ave 282226 max 282226 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282226 Ave neighs/atom = 35.27825 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T313.15.out" else "print 'not_converged' file output/vol_T313.15.out" print '${V}' file output/vol_T313.15.out 287883.83642066 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0