# periodic boundary conditions along all three dimensions boundary p p p # Set neighbor skin variable neigh_skin equal 2.0*${_u_distance} variable neigh_skin equal 2.0*1 neighbor ${neigh_skin} bin neighbor 2 bin # create a supercell with cubic lattice (fcc, bcc, sc, or diamond) # using 10*10*10 conventional (orthogonal) unit cells variable latticeconst_converted equal 6.581419467926026*${_u_distance} variable latticeconst_converted equal 6.581419467926026*1 lattice diamond ${latticeconst_converted} lattice diamond 6.58141946792603 Lattice spacing in x,y,z = 6.5814195 6.5814195 6.5814195 region simbox block 0 10 0 10 0 10 units lattice create_box 1 simbox Created orthogonal box = (0 0 0) to (65.814195 65.814195 65.814195) 1 by 1 by 1 MPI processor grid create_atoms 1 box Created 8000 atoms using lattice units in orthogonal box = (0 0 0) to (65.814195 65.814195 65.814195) create_atoms CPU = 0.011 seconds variable mass_converted equal 118.71*${_u_mass} variable mass_converted equal 118.71*1 kim_interactions Sn WARNING: 'kim_' has been renamed to 'kim '. Please update your input. kim interactions Sn #=== BEGIN kim interactions ================================== pair_style kim MEAM_LAMMPS_KoKimKwon_2018_Sn__MO_129364204512_002 pair_coeff * * Sn #=== END kim interactions ==================================== mass 1 ${mass_converted} mass 1 118.71 # initial volume variable v equal vol # assign formula variable V0 equal ${v} # evaluate initial value variable V0 equal 285074.72533011 variable V0_metal equal ${V0}/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(${_u_distance}*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(1*${_u_distance}*${_u_distance}) variable V0_metal equal 285074.72533011/(1*1*${_u_distance}) variable V0_metal equal 285074.72533011/(1*1*1) variable V0_metal_times1000 equal ${V0_metal}*1000 variable V0_metal_times1000 equal 285074.72533011*1000 print "Initial system volume: ${V0_metal} Angstroms^3" Initial system volume: 285074.72533011 Angstroms^3 # set the time step to 0.001 picoseconds variable timestep_converted equal 0.001*${_u_time} variable timestep_converted equal 0.001*1 timestep ${timestep_converted} timestep 0.001 variable temp_converted equal 333.15*${_u_temperature} variable temp_converted equal 333.15*1 variable Tdamp_converted equal 0.1*${_u_time} variable Tdamp_converted equal 0.1*1 variable press_converted equal 0.0*${_u_pressure} variable press_converted equal 0.0*1 variable Pdamp_converted equal 1*${_u_time} variable Pdamp_converted equal 1*1 # create initial velocities consistent with the chosen temperature velocity all create ${temp_converted} 17 mom yes rot yes velocity all create 333.15 17 mom yes rot yes # set NPT ensemble for all atoms fix ensemble all npt temp ${temp_converted} ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 ${temp_converted} ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 ${Tdamp_converted} iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso ${press_converted} ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 ${press_converted} ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 ${Pdamp_converted} fix ensemble all npt temp 333.15 333.15 0.1 iso 0 0 1 # compute the time averages of pressure, temperature, and volume, respectively # ignore the first 5000 timesteps variable etotal_metal equal etotal/${_u_energy} variable etotal_metal equal etotal/1 variable pe_metal equal pe/${_u_energy} variable pe_metal equal pe/1 variable T_metal equal temp/${_u_temperature} variable T_metal equal temp/1 variable V_metal equal vol/(${_u_distance}*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*${_u_distance}*${_u_distance}) variable V_metal equal vol/(1*1*${_u_distance}) variable V_metal equal vol/(1*1*1) variable P_metal equal press/${_u_pressure} variable P_metal equal press/1 fix avgmyTemp all ave/time 5 20 100 v_T_metal ave running start 5000 fix avgmyPress all ave/time 5 20 100 v_P_metal ave running start 5000 fix avgmyVol all ave/time 5 20 100 v_V_metal ave running start 5000 # extract fix quantities into variables so they can be used in if-else logic later. variable T equal f_avgmyTemp variable P equal f_avgmyPress variable V equal f_avgmyVol # set error bounds for temperature and pressure in original metal units (K and bar) variable T_low equal "333.15 - 0.2" variable T_up equal "333.15 + 0.2" variable P_low equal "0.0 - 0.2" variable P_up equal "0.0 + 0.2" # print to logfile every 1000 timesteps thermo_style custom step etotal v_etotal_metal pe v_pe_metal temp v_T_metal vol v_V_metal press v_P_metal thermo 1000 # Run a simulation for at most 2000*1000 timesteps. At each 1000th time step, check # whether the temperature and pressure have converged. If yes, break. label top variable a loop 2000 run 1000 CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Your simulation uses code contributions which should be cited: - OpenKIM: https://doi.org/10.1007/s11837-011-0102-6 @Article{tadmor:elliott:2011, author = {E. B. Tadmor and R. S. Elliott and J. P. Sethna and R. E. Miller and C. A. Becker}, title = {The potential of atomistic simulations and the {K}nowledgebase of {I}nteratomic {M}odels}, journal = {{JOM}}, year = 2011, volume = 63, number = 17, pages = {17}, doi = {10.1007/s11837-011-0102-6} } - OpenKIM potential: https://openkim.org/cite/MO_129364204512_002#item-citation CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.307 | 4.307 | 4.307 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 0 -24733.044 -24733.044 -25077.505 -25077.505 333.15 333.15 285074.73 285074.73 1290.6243 1290.6243 1000 -24360.066 -24360.066 -24723.481 -24723.481 351.48197 351.48197 288233.98 288233.98 -641.81889 -641.81889 Loop time of 143.358 on 1 procs for 1000 steps with 8000 atoms Performance: 0.603 ns/day, 39.822 hours/ns, 6.976 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 141.46 | 141.46 | 141.46 | 0.0 | 98.67 Neigh | 0.067935 | 0.067935 | 0.067935 | 0.0 | 0.05 Comm | 0.21541 | 0.21541 | 0.21541 | 0.0 | 0.15 Output | 0.00033212 | 0.00033212 | 0.00033212 | 0.0 | 0.00 Modify | 1.4499 | 1.4499 | 1.4499 | 0.0 | 1.01 Other | | 0.1696 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6718 ave 6718 max 6718 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282384 ave 282384 max 282384 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282384 Ave neighs/atom = 35.298 Neighbor list builds = 1 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 1000 -24360.066 -24360.066 -24723.481 -24723.481 351.48197 351.48197 288233.98 288233.98 -641.81889 -641.81889 2000 -24373.987 -24373.987 -24706.36 -24706.36 321.45976 321.45976 288003.98 288003.98 156.79017 156.79017 Loop time of 136.109 on 1 procs for 1000 steps with 8000 atoms Performance: 0.635 ns/day, 37.808 hours/ns, 7.347 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.26 | 134.26 | 134.26 | 0.0 | 98.64 Neigh | 0.18087 | 0.18087 | 0.18087 | 0.0 | 0.13 Comm | 0.20451 | 0.20451 | 0.20451 | 0.0 | 0.15 Output | 0.00032822 | 0.00032822 | 0.00032822 | 0.0 | 0.00 Modify | 1.3014 | 1.3014 | 1.3014 | 0.0 | 0.96 Other | | 0.1581 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6714 ave 6714 max 6714 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282566 ave 282566 max 282566 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282566 Ave neighs/atom = 35.32075 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 2000 -24373.987 -24373.987 -24706.36 -24706.36 321.45976 321.45976 288003.98 288003.98 156.79017 156.79017 3000 -24364.718 -24364.718 -24716.125 -24716.125 339.86833 339.86833 288115.45 288115.45 -280.20772 -280.20772 Loop time of 134.692 on 1 procs for 1000 steps with 8000 atoms Performance: 0.641 ns/day, 37.414 hours/ns, 7.424 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 132.88 | 132.88 | 132.88 | 0.0 | 98.65 Neigh | 0.18052 | 0.18052 | 0.18052 | 0.0 | 0.13 Comm | 0.20054 | 0.20054 | 0.20054 | 0.0 | 0.15 Output | 0.00028468 | 0.00028468 | 0.00028468 | 0.0 | 0.00 Modify | 1.2782 | 1.2782 | 1.2782 | 0.0 | 0.95 Other | | 0.157 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6719 ave 6719 max 6719 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282774 ave 282774 max 282774 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282774 Ave neighs/atom = 35.34675 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 3000 -24364.718 -24364.718 -24716.125 -24716.125 339.86833 339.86833 288115.45 288115.45 -280.20772 -280.20772 4000 -24353.056 -24353.056 -24718.432 -24718.432 353.37768 353.37768 288455.87 288455.87 -110.97347 -110.97347 Loop time of 134.858 on 1 procs for 1000 steps with 8000 atoms Performance: 0.641 ns/day, 37.461 hours/ns, 7.415 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.04 | 133.04 | 133.04 | 0.0 | 98.65 Neigh | 0.18093 | 0.18093 | 0.18093 | 0.0 | 0.13 Comm | 0.20183 | 0.20183 | 0.20183 | 0.0 | 0.15 Output | 0.00032705 | 0.00032705 | 0.00032705 | 0.0 | 0.00 Modify | 1.2825 | 1.2825 | 1.2825 | 0.0 | 0.95 Other | | 0.1566 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6708 ave 6708 max 6708 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283876 ave 283876 max 283876 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283876 Ave neighs/atom = 35.4845 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 0, Press = 0 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 4000 -24353.056 -24353.056 -24718.432 -24718.432 353.37768 353.37768 288455.87 288455.87 -110.97347 -110.97347 5000 -24384.485 -24384.485 -24718.684 -24718.684 323.22439 323.22439 288008.71 288008.71 59.043054 59.043054 Loop time of 136.275 on 1 procs for 1000 steps with 8000 atoms Performance: 0.634 ns/day, 37.854 hours/ns, 7.338 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.41 | 134.41 | 134.41 | 0.0 | 98.63 Neigh | 0.18327 | 0.18327 | 0.18327 | 0.0 | 0.13 Comm | 0.2118 | 0.2118 | 0.2118 | 0.0 | 0.16 Output | 0.00025351 | 0.00025351 | 0.00025351 | 0.0 | 0.00 Modify | 1.3064 | 1.3064 | 1.3064 | 0.0 | 0.96 Other | | 0.1585 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6712 ave 6712 max 6712 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282764 ave 282764 max 282764 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282764 Ave neighs/atom = 35.3455 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 328.550388391577, Press = 113.579325961845 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 5000 -24384.485 -24384.485 -24718.684 -24718.684 323.22439 323.22439 288008.71 288008.71 59.043054 59.043054 6000 -24374.743 -24374.743 -24712.224 -24712.224 326.39916 326.39916 287795.23 287795.23 205.26848 205.26848 Loop time of 135.814 on 1 procs for 1000 steps with 8000 atoms Performance: 0.636 ns/day, 37.726 hours/ns, 7.363 timesteps/s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.93 | 133.93 | 133.93 | 0.0 | 98.62 Neigh | 0.18227 | 0.18227 | 0.18227 | 0.0 | 0.13 Comm | 0.20889 | 0.20889 | 0.20889 | 0.0 | 0.15 Output | 0.00028168 | 0.00028168 | 0.00028168 | 0.0 | 0.00 Modify | 1.3303 | 1.3303 | 1.3303 | 0.0 | 0.98 Other | | 0.1581 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6717 ave 6717 max 6717 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282502 ave 282502 max 282502 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282502 Ave neighs/atom = 35.31275 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 331.754068865619, Press = 11.0125878490065 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 6000 -24374.743 -24374.743 -24712.224 -24712.224 326.39916 326.39916 287795.23 287795.23 205.26848 205.26848 7000 -24379.667 -24379.667 -24719.908 -24719.908 329.06779 329.06779 288008.96 288008.96 87.700646 87.700646 Loop time of 135.434 on 1 procs for 1000 steps with 8000 atoms Performance: 0.638 ns/day, 37.621 hours/ns, 7.384 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.56 | 133.56 | 133.56 | 0.0 | 98.62 Neigh | 0.1812 | 0.1812 | 0.1812 | 0.0 | 0.13 Comm | 0.20631 | 0.20631 | 0.20631 | 0.0 | 0.15 Output | 0.00028389 | 0.00028389 | 0.00028389 | 0.0 | 0.00 Modify | 1.3276 | 1.3276 | 1.3276 | 0.0 | 0.98 Other | | 0.1584 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6713 ave 6713 max 6713 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282880 ave 282880 max 282880 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282880 Ave neighs/atom = 35.36 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.880758094605, Press = -4.08971988305567 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 7000 -24379.667 -24379.667 -24719.908 -24719.908 329.06779 329.06779 288008.96 288008.96 87.700646 87.700646 8000 -24375.88 -24375.88 -24725.045 -24725.045 337.70026 337.70026 288408.8 288408.8 -390.09988 -390.09988 Loop time of 134.659 on 1 procs for 1000 steps with 8000 atoms Performance: 0.642 ns/day, 37.405 hours/ns, 7.426 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 132.8 | 132.8 | 132.8 | 0.0 | 98.62 Neigh | 0.18044 | 0.18044 | 0.18044 | 0.0 | 0.13 Comm | 0.20288 | 0.20288 | 0.20288 | 0.0 | 0.15 Output | 0.00024052 | 0.00024052 | 0.00024052 | 0.0 | 0.00 Modify | 1.3184 | 1.3184 | 1.3184 | 0.0 | 0.98 Other | | 0.1581 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6721 ave 6721 max 6721 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282174 ave 282174 max 282174 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282174 Ave neighs/atom = 35.27175 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.03343468818, Press = -0.370641950417819 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 8000 -24375.88 -24375.88 -24725.045 -24725.045 337.70026 337.70026 288408.8 288408.8 -390.09988 -390.09988 9000 -24375.109 -24375.109 -24715.421 -24715.421 329.13776 329.13776 288276.41 288276.41 -326.09978 -326.09978 Loop time of 134.655 on 1 procs for 1000 steps with 8000 atoms Performance: 0.642 ns/day, 37.404 hours/ns, 7.426 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 132.79 | 132.79 | 132.79 | 0.0 | 98.62 Neigh | 0.18053 | 0.18053 | 0.18053 | 0.0 | 0.13 Comm | 0.2033 | 0.2033 | 0.2033 | 0.0 | 0.15 Output | 0.00023989 | 0.00023989 | 0.00023989 | 0.0 | 0.00 Modify | 1.3188 | 1.3188 | 1.3188 | 0.0 | 0.98 Other | | 0.1599 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6696 ave 6696 max 6696 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282322 ave 282322 max 282322 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282322 Ave neighs/atom = 35.29025 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.857724547011, Press = 2.8427373443798 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 9000 -24375.109 -24375.109 -24715.421 -24715.421 329.13776 329.13776 288276.41 288276.41 -326.09978 -326.09978 10000 -24375.635 -24375.635 -24716.985 -24716.985 330.14115 330.14115 288116.44 288116.44 -48.579683 -48.579683 Loop time of 134.561 on 1 procs for 1000 steps with 8000 atoms Performance: 0.642 ns/day, 37.378 hours/ns, 7.432 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 132.7 | 132.7 | 132.7 | 0.0 | 98.62 Neigh | 0.1805 | 0.1805 | 0.1805 | 0.0 | 0.13 Comm | 0.2023 | 0.2023 | 0.2023 | 0.0 | 0.15 Output | 0.00028942 | 0.00028942 | 0.00028942 | 0.0 | 0.00 Modify | 1.3186 | 1.3186 | 1.3186 | 0.0 | 0.98 Other | | 0.1581 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6720 ave 6720 max 6720 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283178 ave 283178 max 283178 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283178 Ave neighs/atom = 35.39725 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.144864127272, Press = 3.2157891440995 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 10000 -24375.635 -24375.635 -24716.985 -24716.985 330.14115 330.14115 288116.44 288116.44 -48.579683 -48.579683 11000 -24374.864 -24374.864 -24723.78 -24723.78 337.45803 337.45803 287834.36 287834.36 295.50288 295.50288 Loop time of 134.987 on 1 procs for 1000 steps with 8000 atoms Performance: 0.640 ns/day, 37.497 hours/ns, 7.408 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.11 | 133.11 | 133.11 | 0.0 | 98.61 Neigh | 0.18117 | 0.18117 | 0.18117 | 0.0 | 0.13 Comm | 0.20571 | 0.20571 | 0.20571 | 0.0 | 0.15 Output | 0.00023817 | 0.00023817 | 0.00023817 | 0.0 | 0.00 Modify | 1.3265 | 1.3265 | 1.3265 | 0.0 | 0.98 Other | | 0.1594 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6725 ave 6725 max 6725 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283202 ave 283202 max 283202 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283202 Ave neighs/atom = 35.40025 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.108284476076, Press = 2.06868818481285 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 11000 -24374.864 -24374.864 -24723.78 -24723.78 337.45803 337.45803 287834.36 287834.36 295.50288 295.50288 12000 -24369.959 -24369.959 -24720.207 -24720.207 338.74742 338.74742 288169.34 288169.34 42.048156 42.048156 Loop time of 135.033 on 1 procs for 1000 steps with 8000 atoms Performance: 0.640 ns/day, 37.509 hours/ns, 7.406 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.16 | 133.16 | 133.16 | 0.0 | 98.61 Neigh | 0.18091 | 0.18091 | 0.18091 | 0.0 | 0.13 Comm | 0.20566 | 0.20566 | 0.20566 | 0.0 | 0.15 Output | 0.00024089 | 0.00024089 | 0.00024089 | 0.0 | 0.00 Modify | 1.328 | 1.328 | 1.328 | 0.0 | 0.98 Other | | 0.1588 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6714 ave 6714 max 6714 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283258 ave 283258 max 283258 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283258 Ave neighs/atom = 35.40725 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.940742908473, Press = 0.123412233667056 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 12000 -24369.959 -24369.959 -24720.207 -24720.207 338.74742 338.74742 288169.34 288169.34 42.048156 42.048156 13000 -24376.813 -24376.813 -24722.107 -24722.107 333.95563 333.95563 288195.85 288195.85 -148.15724 -148.15724 Loop time of 134.965 on 1 procs for 1000 steps with 8000 atoms Performance: 0.640 ns/day, 37.490 hours/ns, 7.409 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 133.09 | 133.09 | 133.09 | 0.0 | 98.61 Neigh | 0.18095 | 0.18095 | 0.18095 | 0.0 | 0.13 Comm | 0.20534 | 0.20534 | 0.20534 | 0.0 | 0.15 Output | 0.00023928 | 0.00023928 | 0.00023928 | 0.0 | 0.00 Modify | 1.3278 | 1.3278 | 1.3278 | 0.0 | 0.98 Other | | 0.1593 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6724 ave 6724 max 6724 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282980 ave 282980 max 282980 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282980 Ave neighs/atom = 35.3725 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.90836602674, Press = 0.331421211200914 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 13000 -24376.813 -24376.813 -24722.107 -24722.107 333.95563 333.95563 288195.85 288195.85 -148.15724 -148.15724 14000 -24368.598 -24368.598 -24715.112 -24715.112 335.13523 335.13523 288158.25 288158.25 -46.892873 -46.892873 Loop time of 136.124 on 1 procs for 1000 steps with 8000 atoms Performance: 0.635 ns/day, 37.812 hours/ns, 7.346 timesteps/s 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.17 | 134.17 | 134.17 | 0.0 | 98.57 Neigh | 0.24219 | 0.24219 | 0.24219 | 0.0 | 0.18 Comm | 0.20987 | 0.20987 | 0.20987 | 0.0 | 0.15 Output | 0.00024276 | 0.00024276 | 0.00024276 | 0.0 | 0.00 Modify | 1.3396 | 1.3396 | 1.3396 | 0.0 | 0.98 Other | | 0.1589 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6714 ave 6714 max 6714 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282934 ave 282934 max 282934 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282934 Ave neighs/atom = 35.36675 Neighbor list builds = 4 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.869735997549, Press = 1.32393951963903 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 14000 -24368.598 -24368.598 -24715.112 -24715.112 335.13523 335.13523 288158.25 288158.25 -46.892873 -46.892873 15000 -24381.192 -24381.192 -24722.994 -24722.994 330.57895 330.57895 287956.78 287956.78 86.89787 86.89787 Loop time of 135.973 on 1 procs for 1000 steps with 8000 atoms Performance: 0.635 ns/day, 37.770 hours/ns, 7.354 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.08 | 134.08 | 134.08 | 0.0 | 98.61 Neigh | 0.18182 | 0.18182 | 0.18182 | 0.0 | 0.13 Comm | 0.21012 | 0.21012 | 0.21012 | 0.0 | 0.15 Output | 0.00025201 | 0.00025201 | 0.00025201 | 0.0 | 0.00 Modify | 1.3382 | 1.3382 | 1.3382 | 0.0 | 0.98 Other | | 0.1594 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6723 ave 6723 max 6723 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282844 ave 282844 max 282844 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282844 Ave neighs/atom = 35.3555 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.949558452939, Press = 1.85410373523729 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 15000 -24381.192 -24381.192 -24722.994 -24722.994 330.57895 330.57895 287956.78 287956.78 86.89787 86.89787 16000 -24373.198 -24373.198 -24714.625 -24714.625 330.21525 330.21525 287681.99 287681.99 470.38442 470.38442 Loop time of 136.035 on 1 procs for 1000 steps with 8000 atoms Performance: 0.635 ns/day, 37.787 hours/ns, 7.351 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.14 | 134.14 | 134.14 | 0.0 | 98.61 Neigh | 0.18202 | 0.18202 | 0.18202 | 0.0 | 0.13 Comm | 0.20953 | 0.20953 | 0.20953 | 0.0 | 0.15 Output | 0.00024317 | 0.00024317 | 0.00024317 | 0.0 | 0.00 Modify | 1.3397 | 1.3397 | 1.3397 | 0.0 | 0.98 Other | | 0.1594 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6709 ave 6709 max 6709 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282720 ave 282720 max 282720 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282720 Ave neighs/atom = 35.34 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.860649824632, Press = 1.3707206037665 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 16000 -24373.198 -24373.198 -24714.625 -24714.625 330.21525 330.21525 287681.99 287681.99 470.38442 470.38442 17000 -24368.705 -24368.705 -24714.586 -24714.586 334.52339 334.52339 287873.52 287873.52 246.83384 246.83384 Loop time of 137.112 on 1 procs for 1000 steps with 8000 atoms Performance: 0.630 ns/day, 38.087 hours/ns, 7.293 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 135.21 | 135.21 | 135.21 | 0.0 | 98.61 Neigh | 0.18272 | 0.18272 | 0.18272 | 0.0 | 0.13 Comm | 0.21289 | 0.21289 | 0.21289 | 0.0 | 0.16 Output | 0.00024358 | 0.00024358 | 0.00024358 | 0.0 | 0.00 Modify | 1.3499 | 1.3499 | 1.3499 | 0.0 | 0.98 Other | | 0.1608 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6721 ave 6721 max 6721 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 283292 ave 283292 max 283292 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 283292 Ave neighs/atom = 35.4115 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.757041118038, Press = -0.477150222598538 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 17000 -24368.705 -24368.705 -24714.586 -24714.586 334.52339 334.52339 287873.52 287873.52 246.83384 246.83384 18000 -24369.977 -24369.977 -24713.444 -24713.444 332.18873 332.18873 288326.5 288326.5 -331.53041 -331.53041 Loop time of 136.777 on 1 procs for 1000 steps with 8000 atoms Performance: 0.632 ns/day, 37.994 hours/ns, 7.311 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 134.87 | 134.87 | 134.87 | 0.0 | 98.61 Neigh | 0.18275 | 0.18275 | 0.18275 | 0.0 | 0.13 Comm | 0.21507 | 0.21507 | 0.21507 | 0.0 | 0.16 Output | 0.00029368 | 0.00029368 | 0.00029368 | 0.0 | 0.00 Modify | 1.3478 | 1.3478 | 1.3478 | 0.0 | 0.99 Other | | 0.1592 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6717 ave 6717 max 6717 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282536 ave 282536 max 282536 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282536 Ave neighs/atom = 35.317 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.787349554623, Press = 0.20761828941577 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 18000 -24369.977 -24369.977 -24713.444 -24713.444 332.18873 332.18873 288326.5 288326.5 -331.53041 -331.53041 19000 -24376.121 -24376.121 -24716.6 -24716.6 329.29883 329.29883 288085.84 288085.84 -21.912693 -21.912693 Loop time of 140.23 on 1 procs for 1000 steps with 8000 atoms Performance: 0.616 ns/day, 38.953 hours/ns, 7.131 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 138.26 | 138.26 | 138.26 | 0.0 | 98.60 Neigh | 0.18245 | 0.18245 | 0.18245 | 0.0 | 0.13 Comm | 0.21661 | 0.21661 | 0.21661 | 0.0 | 0.15 Output | 0.00024388 | 0.00024388 | 0.00024388 | 0.0 | 0.00 Modify | 1.4033 | 1.4033 | 1.4033 | 0.0 | 1.00 Other | | 0.1631 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6713 ave 6713 max 6713 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282570 ave 282570 max 282570 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282570 Ave neighs/atom = 35.32125 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 332.939458389767, Press = 0.726327050751285 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 19000 -24376.121 -24376.121 -24716.6 -24716.6 329.29883 329.29883 288085.84 288085.84 -21.912693 -21.912693 20000 -24380.293 -24380.293 -24726.755 -24726.755 335.08494 335.08494 287977.36 287977.36 98.415891 98.415891 Loop time of 155.94 on 1 procs for 1000 steps with 8000 atoms Performance: 0.554 ns/day, 43.317 hours/ns, 6.413 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 153.66 | 153.66 | 153.66 | 0.0 | 98.54 Neigh | 0.1974 | 0.1974 | 0.1974 | 0.0 | 0.13 Comm | 0.23418 | 0.23418 | 0.23418 | 0.0 | 0.15 Output | 0.00024207 | 0.00024207 | 0.00024207 | 0.0 | 0.00 Modify | 1.6629 | 1.6629 | 1.6629 | 0.0 | 1.07 Other | | 0.1819 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6724 ave 6724 max 6724 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282358 ave 282358 max 282358 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282358 Ave neighs/atom = 35.29475 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" print "flag: Temp = ${T}, Press = ${P}" flag: Temp = 333.019094932838, Press = 0.774640812017063 next a jump SELF top variable a loop 2000 run 1000 Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule Neighbor list info ... update every 1 steps, delay 10 steps, check yes max neighbors/atom: 2000, page size: 100000 master list distance cutoff = 7 ghost atom cutoff = 7 binsize = 3.5, bins = 19 19 19 1 neighbor lists, perpetual/occasional/extra = 1 0 0 (1) pair kim, perpetual attributes: full, newton off, cut 7 pair build: full/bin/atomonly stencil: full/bin/3d bin: standard Per MPI rank memory allocation (min/avg/max) = 4.309 | 4.309 | 4.309 Mbytes Step TotEng v_etotal_metal PotEng v_pe_metal Temp v_T_metal Volume v_V_metal Press v_P_metal 20000 -24380.293 -24380.293 -24726.755 -24726.755 335.08494 335.08494 287977.36 287977.36 98.415891 98.415891 21000 -24367.129 -24367.129 -24714.236 -24714.236 335.70917 335.70917 287918.68 287918.68 258.46153 258.46153 Loop time of 155.952 on 1 procs for 1000 steps with 8000 atoms Performance: 0.554 ns/day, 43.320 hours/ns, 6.412 timesteps/s 100.0% CPU use with 1 MPI tasks x 1 OpenMP threads MPI task timing breakdown: Section | min time | avg time | max time |%varavg| %total --------------------------------------------------------------- Pair | 153.68 | 153.68 | 153.68 | 0.0 | 98.54 Neigh | 0.19891 | 0.19891 | 0.19891 | 0.0 | 0.13 Comm | 0.23424 | 0.23424 | 0.23424 | 0.0 | 0.15 Output | 0.00024537 | 0.00024537 | 0.00024537 | 0.0 | 0.00 Modify | 1.6579 | 1.6579 | 1.6579 | 0.0 | 1.06 Other | | 0.1814 | | | 0.12 Nlocal: 8000 ave 8000 max 8000 min Histogram: 1 0 0 0 0 0 0 0 0 0 Nghost: 6717 ave 6717 max 6717 min Histogram: 1 0 0 0 0 0 0 0 0 0 Neighs: 0 ave 0 max 0 min Histogram: 1 0 0 0 0 0 0 0 0 0 FullNghs: 282742 ave 282742 max 282742 min Histogram: 1 0 0 0 0 0 0 0 0 0 Total # of neighbors = 282742 Ave neighs/atom = 35.34275 Neighbor list builds = 3 Dangerous builds = 0 if "${V_metal}>${V0_metal_times1000}" then "jump SELF unstable" if "${T}>${T_low} && ${T}<${T_up} && ${P}>${P_low} && ${P}<${P_up}" then "jump SELF break" jump SELF break # Write final averaged volume to file if temperature and volume have converged; otherwise wirte a # flag to indicate non-convergence. variable myStep equal step if "${myStep} < 2000000" then "print '${V}' file output/vol_T333.15.out" else "print 'not_converged' file output/vol_T333.15.out" print '${V}' file output/vol_T333.15.out 288070.59083221 print "LAMMPS calculation completed" LAMMPS calculation completed quit 0